# Group: paint - Dataset: paint_sgd

## SUMMARY

This report generated on 2024-10-22

  * Associations: 15192
  * Lines in file (incl headers): 15217
  * Lines skipped: 19
## Header From Original Association File

> !gaf-version: 2.2  
> !Created on Mon Sep 23 12:29:02 2024.  
> !generated-by: PANTHER  
> !date-generated: 2024-09-23  
> !PANTHER version: v.19.0.  
> !GO version: 2024-06-17.  

## Contents

[gorule-0000002](#gorule-0000002)

[gorule-0000005](#gorule-0000005)

[gorule-0000006](#gorule-0000006)

[gorule-0000007](#gorule-0000007)

[gorule-0000008](#gorule-0000008)

[gorule-0000011](#gorule-0000011)

[gorule-0000013](#gorule-0000013)

[gorule-0000015](#gorule-0000015)

[gorule-0000016](#gorule-0000016)

[gorule-0000017](#gorule-0000017)

[gorule-0000018](#gorule-0000018)

[gorule-0000020](#gorule-0000020)

[gorule-0000022](#gorule-0000022)

[gorule-0000028](#gorule-0000028)

[gorule-0000029](#gorule-0000029)

[gorule-0000030](#gorule-0000030)

[gorule-0000037](#gorule-0000037)

[gorule-0000039](#gorule-0000039)

[gorule-0000042](#gorule-0000042)

[gorule-0000043](#gorule-0000043)

[gorule-0000046](#gorule-0000046)

[gorule-0000050](#gorule-0000050)

[gorule-0000055](#gorule-0000055)

[gorule-0000058](#gorule-0000058)

[gorule-0000061](#gorule-0000061)

[gorule-0000063](#gorule-0000063)

[gorule-0000064](#gorule-0000064)

[other](#other)


## MESSAGES

### gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

* total: 0
### gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

* total: 0
### gorule-0000006

IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

* total: 0
### gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

* total: 0
### gorule-0000008

No annotations should be made to uninformative high level terms

* total: 14
#### Messages
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000000529	KCC4	involved_in	GO:0007093	GO_REF:0000033	IBA	PANTHER:PTN008613667|UniProtKB:Q8TDC3|SGD:S000000529|SGD:S000002915|SGD:S000001584	P	Probable serine_threonine-protein kinase KCC4	UniProtKB:P25389|PTN000680255	protein	taxon:559292	20240321	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000006021	ATG21	involved_in	GO:0030242	GO_REF:0000033	IBA	PANTHER:PTN000132136|SGD:S000001917	P	Autophagy-related protein 21	UniProtKB:Q02887|PTN000132226	protein	taxon:559292	20240205	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000003820	PTK2	involved_in	GO:0007093	GO_REF:0000033	IBA	PANTHER:PTN008613667|UniProtKB:Q8TDC3|SGD:S000000529|SGD:S000002915|SGD:S000001584	P	Serine_threonine-protein kinase PTK2_STK2	UniProtKB:P47116|PTN000679479	protein	taxon:559292	20240321	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000003455	HSV2	involved_in	GO:0030242	GO_REF:0000033	IBA	PANTHER:PTN000132136|SGD:S000001917	P	SVP1-like protein 2	UniProtKB:P50079|PTN000132322	protein	taxon:559292	20240205	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000004415	ATG17	involved_in	GO:0030242	GO_REF:0000033	IBA	PANTHER:PTN001997259|SGD:S000004415	P	Autophagy-related protein 17	UniProtKB:Q06410|PTN001997266	protein	taxon:559292	20240206	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000001917	ATG18	involved_in	GO:0030242	GO_REF:0000033	IBA	PANTHER:PTN000132136|SGD:S000001917	P	Autophagy-related protein 18	UniProtKB:P43601|PTN000132229	protein	taxon:559292	20240205	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000002655	VHS1	involved_in	GO:0007093	GO_REF:0000033	IBA	PANTHER:PTN008613667|UniProtKB:Q8TDC3|SGD:S000000529|SGD:S000002915|SGD:S000001584	P	Serine_threonine-protein kinase VHS1	UniProtKB:Q03785|PTN000686380	protein	taxon:559292	20240321	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000001584	HSL1	involved_in	GO:0007093	GO_REF:0000033	IBA	PANTHER:PTN008613667|UniProtKB:Q8TDC3|SGD:S000000529|SGD:S000002915|SGD:S000001584	P	Probable serine_threonine-protein kinase HSL1	UniProtKB:P34244|PTN000681677	protein	taxon:559292	20240321	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000001124	KSP1	involved_in	GO:0007093	GO_REF:0000033	IBA	PANTHER:PTN008613667|UniProtKB:Q8TDC3|SGD:S000000529|SGD:S000002915|SGD:S000001584	P	Serine_threonine-protein kinase KSP1	UniProtKB:P38691|PTN002389094	protein	taxon:559292	20240321	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000001681	PTK1	involved_in	GO:0007093	GO_REF:0000033	IBA	PANTHER:PTN008613667|UniProtKB:Q8TDC3|SGD:S000000529|SGD:S000002915|SGD:S000001584	P	Serine_threonine-protein kinase PTK1_STK1	UniProtKB:P36002|PTN000679478	protein	taxon:559292	20240321	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000006024	FMP30	is_active_in	GO:0043227	GO_REF:0000033	IBA	PANTHER:PTN001806046|SGD:S000006024|UniProtKB:Q6IQ20|UniProtKB:Q58CN9|MGI:MGI:2140885	C	N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D, mitochondrial	UniProtKB:Q02883|PTN001280874	protein	taxon:559292	20240730	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000005947	SKS1	involved_in	GO:0007093	GO_REF:0000033	IBA	PANTHER:PTN008613667|UniProtKB:Q8TDC3|SGD:S000000529|SGD:S000002915|SGD:S000001584	P	Serine_threonine-protein kinase SKS1	UniProtKB:Q12505|PTN000679452	protein	taxon:559292	20240321	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000002915	GIN4	involved_in	GO:0007093	GO_REF:0000033	IBA	PANTHER:PTN008613667|UniProtKB:Q8TDC3|SGD:S000000529|SGD:S000002915|SGD:S000001584	P	Serine_threonine-protein kinase GIN4	UniProtKB:Q12263|PTN000679727	protein	taxon:559292	20240321	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000008: No annotations should be made to uninformatively high level terms -- `SGD	S000002375	RRI1	involved_in	GO:0022414	GO_REF:0000033	IBA	PANTHER:PTN000045369|UniProtKB:Q5BBF1|FB:FBgn0027053|dictyBase:DDB_G0284597|WB:WBGene00000817|SGD:S000002375|TAIR:locus:2017764	P	COP9 signalosome complex subunit 5	UniProtKB:Q12468|PTN000045420	protein	taxon:559292	20240820	GO_Central		
`
### gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

* total: 0
### gorule-0000013

Taxon-appropriate annotation check

* total: 15
#### Messages
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000003930	LMO1	involved_in	GO:0048870	GO_REF:0000033	IBA	PANTHER:PTN000299186|dictyBase:DDB_G0278051|FB:FBgn0032409|UniProtKB:Q92556|UniProtKB:Q96JJ3|WB:WBGene00000426	P	ELMO family protein LMO1	UniProtKB:Q07799|PTN001764799	protein	taxon:559292	20221007	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000002542	YCF1	enables	GO:0015127	GO_REF:0000033	IBA	PANTHER:PTN001200390|SGD:S000003938|SGD:S000002542	F	Metal resistance protein YCF1	UniProtKB:P39109|PTN000658409	protein	taxon:559292	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000006061	MKK2	involved_in	GO:0000196	GO_REF:0000033	IBA	PANTHER:PTN001220604|SGD:S000006061|SGD:S000005757|PomBase:SPBC543.07	P	MAP kinase kinase MKK2_SSP33	UniProtKB:P32491|PTN000684672	protein	taxon:559292	20210603	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000004715	MYO5	is_active_in	GO:0005902	GO_REF:0000033	IBA	PANTHER:PTN001406997|UniProtKB:P47807|MGI:MGI:107732|UniProtKB:O00159|UniProtKB:Q9UBC5|MGI:MGI:1927091	C	Myosin-5	UniProtKB:Q04439|PTN000321837	protein	taxon:559292	20240205	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000002180	GPD1	enables	GO:0047952	GO_REF:0000033	IBA	PANTHER:PTN000919759|UniProtKB:C8VTT9|MGI:MGI:95679|PomBase:SPBC215.05|SGD:S000002180|SGD:S000005420	F	Glycerol-3-phosphate dehydrogenase [NAD(+)] 1	UniProtKB:Q00055|PTN000198091	protein	taxon:559292	20240729	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000003034	SGF73	involved_in	GO:0031048	GO_REF:0000033	IBA	PANTHER:PTN001031589|PomBase:SPCC126.04c	P	SAGA-associated factor 73	UniProtKB:P53165|PTN000387891	protein	taxon:559292	20240213	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000003938	BPT1	enables	GO:0015127	GO_REF:0000033	IBA	PANTHER:PTN001200390|SGD:S000003938|SGD:S000002542	F	Bile pigment transporter 1	UniProtKB:P14772|PTN000658408	protein	taxon:559292	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000005757	MKK1	involved_in	GO:0000196	GO_REF:0000033	IBA	PANTHER:PTN001220604|SGD:S000006061|SGD:S000005757|PomBase:SPBC543.07	P	MAP kinase kinase MKK1_SSP32	UniProtKB:P32490|PTN000684673	protein	taxon:559292	20210603	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000005420	GPD2	enables	GO:0047952	GO_REF:0000033	IBA	PANTHER:PTN000919759|UniProtKB:C8VTT9|MGI:MGI:95679|PomBase:SPBC215.05|SGD:S000002180|SGD:S000005420	F	Glycerol-3-phosphate dehydrogenase [NAD(+)] 2, mitochondrial	UniProtKB:P41911|PTN000198092	protein	taxon:559292	20240729	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000001612	MYO3	is_active_in	GO:0005902	GO_REF:0000033	IBA	PANTHER:PTN001406997|UniProtKB:P47807|MGI:MGI:107732|UniProtKB:O00159|UniProtKB:Q9UBC5|MGI:MGI:1927091	C	Myosin-3	UniProtKB:P36006|PTN000321838	protein	taxon:559292	20240205	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000004460	YPT7	is_active_in	GO:0045335	GO_REF:0000033	IBA	PANTHER:PTN000635769|dictyBase:DDB_G0269236|MGI:MGI:2442295|UniProtKB:Q9NP90|UniProtKB:P51151|WB:WBGene00004271|UniProtKB:Q96AH8|UniProtKB:P51149	C	Ypt_Rab-type GTPase YPT7	UniProtKB:P32939|PTN000635835	protein	taxon:559292	20201002	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000005072	TEP1	involved_in	GO:0048870	GO_REF:0000033	IBA	PANTHER:PTN000959472|dictyBase:DDB_G0286557|MGI:MGI:109583	P	Probable phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TEP1	UniProtKB:P53916|PTN000266993	protein	taxon:559292	20200305	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000000270	NRG2	part_of	GO:0031519	GO_REF:0000033	IBA	PANTHER:PTN000360827|MGI:MGI:99150|FB:FBgn0002521	C	Probable transcriptional regulator NRG2	UniProtKB:P38082|PTN000360882	protein	taxon:559292	20170602	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000000514	STP22	involved_in	GO:0008333	GO_REF:0000033	IBA	PANTHER:PTN000592420|WB:WBGene00015658|RGD:3909	P	Suppressor protein STP22 of temperature-sensitive alpha-factor receptor and arginine permease	UniProtKB:P25604|PTN000592498	protein	taxon:559292	20211108	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `SGD	S000002450	NRG1	part_of	GO:0031519	GO_REF:0000033	IBA	PANTHER:PTN000360827|MGI:MGI:99150|FB:FBgn0002521	C	Transcriptional regulator NRG1	UniProtKB:Q03125|PTN000149122	protein	taxon:559292	20170602	GO_Central		
`
### gorule-0000015

Dual species taxon check

* total: 0
### gorule-0000016

With/From: IC annotations require a With/From GO ID

* total: 0
### gorule-0000017

IDA annotations must not have a With/From entry

* total: 0
### gorule-0000018

IPI annotations require a With/From entry

* total: 0
### gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

* total: 52
#### Messages
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0003867) -- `SGD	S000003251	UGA1	enables	GO:0003867	GO_REF:0000033	IBA	PANTHER:PTN000944876|UniProtKB:P94427|UniProtKB:P80404|PomBase:SPAC19D5.07|UniProtKB:P22256|UniProtKB:P50457|SGD:S000003251	F	4-aminobutyrate aminotransferase	UniProtKB:P17649|PTN000241277	protein	taxon:559292	20240919	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006507) -- `SGD	S000003668	YJL132W	involved_in	GO:0006507	GO_REF:0000033	IBA	PANTHER:PTN000576507|UniProtKB:P80108|UniProtKB:P80109|MGI:MGI:106604	P	Uncharacterized protein YJL132W	UniProtKB:P47014|PTN000576534	protein	taxon:559292	20240206	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0035308) -- `SGD	S000005101	IGO1	involved_in	GO:0035308	GO_REF:0000033	IBA	PANTHER:PTN001309504|SGD:S000005101	P	mRNA stability protein IGO1	UniProtKB:P53897|PTN000820577	protein	taxon:559292	20230602	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0035308) -- `SGD	S000007496	IGO2	involved_in	GO:0035308	GO_REF:0000033	IBA	PANTHER:PTN001309504|SGD:S000005101	P	mRNA stability protein IGO2	UniProtKB:Q9P305|PTN000820578	protein	taxon:559292	20230602	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0000275) -- `SGD	S000002162	ATP16	part_of	GO:0000275	GO_REF:0000033	IBA	PANTHER:PTN000352457|SGD:S000002162|TAIR:locus:2171022|UniProtKB:Q586H1	C	ATP synthase subunit delta, mitochondrial	UniProtKB:Q12165|PTN000352502	protein	taxon:559292	20240730	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0000276) -- `SGD	S000007274	OLI1	part_of	GO:0000276	GO_REF:0000033	IBA	PANTHER:PTN000003243|UniProtKB:Q57WQ3	C	ATP synthase subunit 9, mitochondrial	UniProtKB:P61829|PTN000003355	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0000276) -- `SGD	S000007267	ATP8	part_of	GO:0000276	GO_REF:0000033	IBA	PANTHER:PTN002188719|UniProtKB:P0CY41	C	ATP synthase protein 8	UniProtKB:P00856|PTN002188726	protein	taxon:559292	20240801	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0003721) -- `SGD	S000004310	EST2	enables	GO:0003721	GO_REF:0000033	IBA	PANTHER:PTN000249074|SGD:S000004310|CGD:CAL0000184329|UniProtKB:O14746|PomBase:SPBC29A3.14c|UniProtKB:Q1PS67	F	Telomerase reverse transcriptase	UniProtKB:Q06163|PTN000249115	protein	taxon:559292	20200808	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004024) -- `SGD	S000002327	SFA1	enables	GO:0004024	GO_REF:0000033	IBA	PANTHER:PTN000191653|UniProtKB:P08319|UniProtKB:P00325|MGI:MGI:1349472|UniProtKB:P25437|UniProtKB:P40394|UniProtKB:P07327	F	S-(hydroxymethyl)glutathione dehydrogenase	UniProtKB:P32771|PTN000191794	protein	taxon:559292	20181004	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0004310) -- `SGD	S000001233	ERG9	enables	GO:0004310	GO_REF:0000033	IBA	PANTHER:PTN001700951|SGD:S000001233|TAIR:locus:2139514|RGD:61834|PomBase:SPBC646.05c	F	Squalene synthase ERG9	UniProtKB:P29704|PTN000179323	protein	taxon:559292	20200807	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005746) -- `SGD	S000005301	RCF2	part_of	GO:0005746	GO_REF:0000033	IBA	PANTHER:PTN001997468|PomBase:SPAC1565.01	C	Respiratory supercomplex factor 2, mitochondrial	UniProtKB:P53721|PTN001997478	protein	taxon:559292	20240731	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- `SGD	S000003415	QCR9	part_of	GO:0005750	GO_REF:0000033	IBA	PANTHER:PTN000312316|UniProtKB:Q9UDW1	C	Cytochrome b-c1 complex subunit 9, mitochondrial	UniProtKB:P22289|PTN000312353	protein	taxon:559292	20240730	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- `SGD	S000007270	COB	part_of	GO:0005750	GO_REF:0000033	IBA	PANTHER:PTN000444161|UniProtKB:P00157|UniProtKB:P00156|UniProtKB:P18946	C	Cytochrome b	UniProtKB:P00163|PTN000444200	protein	taxon:559292	20240731	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- `SGD	S000003702	QCR8	part_of	GO:0005750	GO_REF:0000033	IBA	PANTHER:PTN000950370|UniProtKB:O14949	C	Cytochrome b-c1 complex subunit 8, mitochondrial	UniProtKB:P08525|PTN000950391	protein	taxon:559292	20240730	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- `SGD	S000005591	CYT1	part_of	GO:0005750	GO_REF:0000033	IBA	PANTHER:PTN000030137|UniProtKB:P08574	C	Cytochrome c1, heme protein, mitochondrial	UniProtKB:P07143|PTN000030178	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- `SGD	S000001929	QCR6	part_of	GO:0005750	GO_REF:0000033	IBA	PANTHER:PTN000393767|UniProtKB:P07919	C	Cytochrome b-c1 complex subunit 6, mitochondrial	UniProtKB:P00127|PTN000393814	protein	taxon:559292	20240730	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- `SGD	S000000750	RIP1	part_of	GO:0005750	GO_REF:0000033	IBA	PANTHER:PTN000015359|UniProtKB:P47985|TAIR:locus:2181670|TAIR:locus:2181675|PomBase:SPBC16H5.06	C	Cytochrome b-c1 complex subunit Rieske, mitochondrial	UniProtKB:P08067|PTN000015410	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005750) -- `SGD	S000002937	QCR7	part_of	GO:0005750	GO_REF:0000033	IBA	PANTHER:PTN000246311|UniProtKB:P14927|UniProtKB:Q871K1	C	Cytochrome b-c1 complex subunit 7, mitochondrial	UniProtKB:P00128|PTN000246362	protein	taxon:559292	20240730	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- `SGD	S000007264	AI4	part_of	GO:0005751	GO_REF:0000033	IBA	PANTHER:PTN000046096|UniProtKB:P00395|MGI:MGI:102504|PomBase:SPMIT.01	C	Intron-encoded DNA endonuclease aI4	UniProtKB:P03878|PTN000046142	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- `SGD	S000003195	MTC3	part_of	GO:0005751	GO_REF:0000033	IBA	PANTHER:PTN000076140|UniProtKB:P13073|UniProtKB:P00423|PomBase:SPCC338.10c	C	Maintenance of telomere capping protein 3, mitochondrial	UniProtKB:P53077|PTN000842468	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- `SGD	S000004997	COX5A	part_of	GO:0005751	GO_REF:0000033	IBA	PANTHER:PTN000076140|UniProtKB:P13073|UniProtKB:P00423|PomBase:SPCC338.10c	C	Cytochrome c oxidase subunit 5A, mitochondrial	UniProtKB:P00424|PTN000842469	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- `SGD	S000007265	AI5_ALPHA	part_of	GO:0005751	GO_REF:0000033	IBA	PANTHER:PTN000046096|UniProtKB:P00395|MGI:MGI:102504|PomBase:SPMIT.01	C	Intron-encoded DNA endonuclease aI5 alpha	UniProtKB:Q9ZZX1|PTN000046143	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- `SGD	S000001373	COX5B	part_of	GO:0005751	GO_REF:0000033	IBA	PANTHER:PTN000076140|UniProtKB:P13073|UniProtKB:P00423|PomBase:SPCC338.10c	C	Cytochrome c oxidase subunit 5B, mitochondrial	UniProtKB:P00425|PTN000842470	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- `SGD	S000003159	COX13	part_of	GO:0005751	GO_REF:0000033	IBA	PANTHER:PTN000161401|PomBase:SPCC1739.09c|UniProtKB:P12074	C	Cytochrome c oxidase subunit 13, mitochondrial	UniProtKB:P32799|PTN000161472	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- `SGD	S000007260	COX1	part_of	GO:0005751	GO_REF:0000033	IBA	PANTHER:PTN000046096|UniProtKB:P00395|MGI:MGI:102504|PomBase:SPMIT.01	C	Cytochrome c oxidase subunit 1	UniProtKB:P00401|PTN000046145	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- `SGD	S000001093	COX6	part_of	GO:0005751	GO_REF:0000033	IBA	PANTHER:PTN000367750|MGI:MGI:88474|PomBase:SPAC1B2.04|UniProtKB:P20674	C	Cytochrome c oxidase subunit 6, mitochondrial	UniProtKB:P00427|PTN000367797	protein	taxon:559292	20240730	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005751) -- `SGD	S000007263	AI3	part_of	GO:0005751	GO_REF:0000033	IBA	PANTHER:PTN000046096|UniProtKB:P00395|MGI:MGI:102504|PomBase:SPMIT.01	C	Intron-encoded DNA endonuclease aI3	UniProtKB:P03877|PTN000046141	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005753) -- `SGD	S000007268	ATP6	part_of	GO:0005753	GO_REF:0000033	IBA	PANTHER:PTN000151035|UniProtKB:P00846|UniProtKB:P00847	C	ATP synthase subunit a	UniProtKB:P00854|PTN000151067	protein	taxon:559292	20240918	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0005753) -- `SGD	S000003882	ATP2	part_of	GO:0005753	GO_REF:0000033	IBA	PANTHER:PTN000390017|UniProtKB:P06576|PomBase:SPAC222.12c|TAIR:locus:504956338|RGD:621368|UniProtKB:P00829|TAIR:locus:505006590|UniProtKB:Q57XX1	C	ATP synthase subunit beta, mitochondrial	UniProtKB:P00830|PTN000390073	protein	taxon:559292	20240730	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006490) -- `SGD	S000004993	ALG11	involved_in	GO:0006490	GO_REF:0000033	IBA	PANTHER:PTN000282963|SGD:S000004993|TAIR:locus:2065080|PomBase:SPCC330.08|UniProtKB:Q2TAA5	P	GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase	UniProtKB:P53954|PTN000282442	protein	taxon:559292	20240801	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006490) -- `SGD	S000005528	ALG6	involved_in	GO:0006490	GO_REF:0000033	IBA	PANTHER:PTN000275691|PomBase:SPBC342.01c|SGD:S000005528|UniProtKB:Q9Y672|UniProtKB:Q9BVK2|SGD:S000005593	P	Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase	UniProtKB:Q12001|PTN000275794	protein	taxon:559292	20240730	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006490) -- `SGD	S000005593	ALG8	involved_in	GO:0006490	GO_REF:0000033	IBA	PANTHER:PTN000275691|PomBase:SPBC342.01c|SGD:S000005528|UniProtKB:Q9Y672|UniProtKB:Q9BVK2|SGD:S000005593	P	Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase	UniProtKB:P40351|PTN000275738	protein	taxon:559292	20240730	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006490) -- `SGD	S000003033	ALG2	involved_in	GO:0006490	GO_REF:0000033	IBA	PANTHER:PTN000282458|SGD:S000003033|UniProtKB:Q9H553	P	Alpha-1,3_1,6-mannosyltransferase ALG2	UniProtKB:P43636|PTN000282503	protein	taxon:559292	20170228	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0008272) -- `SGD	S000004082	SUL2	involved_in	GO:0008272	GO_REF:0000033	IBA	PANTHER:PTN000212046|UniProtKB:Q5B9Q0|MGI:MGI:2159728|MGI:MGI:2385894|RGD:620136|SGD:S000000498|SGD:S000004082|UniProtKB:Q9BXS9|UniProtKB:Q86WA9|MGI:MGI:892977|MGI:MGI:2384791|RGD:620622|UniProtKB:Q8TE54|ZFIN:ZDB-GENE-030131-1566|UniProtKB:Q9BEG8|FB:FBgn0036770|UniProtKB:P50443|UniProtKB:Q96RN1	P	Sulfate permease 2	UniProtKB:Q12325|PTN000212417	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0008272) -- `SGD	S000000498	SUL1	involved_in	GO:0008272	GO_REF:0000033	IBA	PANTHER:PTN000212046|UniProtKB:Q5B9Q0|MGI:MGI:2159728|MGI:MGI:2385894|RGD:620136|SGD:S000000498|SGD:S000004082|UniProtKB:Q9BXS9|UniProtKB:Q86WA9|MGI:MGI:892977|MGI:MGI:2384791|RGD:620622|UniProtKB:Q8TE54|ZFIN:ZDB-GENE-030131-1566|UniProtKB:Q9BEG8|FB:FBgn0036770|UniProtKB:P50443|UniProtKB:Q96RN1	P	Sulfate permease 1	UniProtKB:P38359|PTN000212418	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0008272) -- `SGD	S000004340	DIC1	involved_in	GO:0008272	GO_REF:0000033	IBA	PANTHER:PTN000756618|RGD:621430|FB:FBgn0027610|FB:FBgn0033248	P	Mitochondrial dicarboxylate transporter	UniProtKB:Q06143|PTN000640895	protein	taxon:559292	20170228	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- `SGD	S000003519	IMA1	enables	GO:0032450	GO_REF:0000033	IBA	PANTHER:PTN000820510|CGD:CAL0000194458	F	Oligo-1,6-glucosidase IMA1	UniProtKB:P53051|PTN000040216	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- `SGD	S000005517	IMA2	enables	GO:0032450	GO_REF:0000033	IBA	PANTHER:PTN000820510|CGD:CAL0000194458	F	Oligo-1,6-glucosidase IMA2	UniProtKB:Q08295|PTN000040220	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- `SGD	S000001434	IMA3	enables	GO:0032450	GO_REF:0000033	IBA	PANTHER:PTN000820510|CGD:CAL0000194458	F	Oligo-1,6-glucosidase IMA3	UniProtKB:P0CW40|PTN000040215	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- `SGD	S000003524	MAL12	enables	GO:0032450	GO_REF:0000033	IBA	PANTHER:PTN000820510|CGD:CAL0000194458	F	Alpha-glucosidase MAL12	UniProtKB:P53341|PTN000040217	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- `SGD	S000003757	IMA4	enables	GO:0032450	GO_REF:0000033	IBA	PANTHER:PTN000820510|CGD:CAL0000194458	F	Oligo-1,6-glucosidase IMA4	UniProtKB:P0CW41|PTN001309428	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- `SGD	S000003752	IMA5	enables	GO:0032450	GO_REF:0000033	IBA	PANTHER:PTN000820510|CGD:CAL0000194458	F	Oligo-1,6-glucosidase IMA5	UniProtKB:P40884|PTN000040218	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0032450) -- `SGD	S000000503	MAL32	enables	GO:0032450	GO_REF:0000033	IBA	PANTHER:PTN000820510|CGD:CAL0000194458	F	Alpha-glucosidase MAL32	UniProtKB:P38158|PTN000040221	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0044255) -- `SGD	S000002267	YDL109C	involved_in	GO:0044255	GO_REF:0000033	IBA	PANTHER:PTN000280657|SGD:S000003112	P	Putative lipase YDL109C	UniProtKB:Q12103|PTN000773844	protein	taxon:559292	20201205	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0044255) -- `SGD	S000005585	LPL1	involved_in	GO:0044255	GO_REF:0000033	IBA	PANTHER:PTN000280657|SGD:S000003112	P	Lipid droplet phospholipase 1	UniProtKB:Q08448|PTN000967939	protein	taxon:559292	20201205	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0044255) -- `SGD	S000003112	ROG1	involved_in	GO:0044255	GO_REF:0000033	IBA	PANTHER:PTN000280657|SGD:S000003112	P	Putative lipase ROG1	UniProtKB:P53118|PTN000280741	protein	taxon:559292	20201205	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0044255) -- `SGD	S000003263	IMO32	involved_in	GO:0044255	GO_REF:0000033	IBA	PANTHER:PTN002919262|SGD:S000003263	P	Probable alcohol acetyltransferase	UniProtKB:P53219|PTN000106289	protein	taxon:559292	20220331	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0044255) -- `SGD	S000002852	YDR444W	involved_in	GO:0044255	GO_REF:0000033	IBA	PANTHER:PTN000280657|SGD:S000003112	P	Putative lipase YDR444W	UniProtKB:Q04093|PTN000773841	protein	taxon:559292	20201205	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0044255) -- `SGD	S000005038	APP1	involved_in	GO:0044255	GO_REF:0000033	IBA	PANTHER:PTN002000332|SGD:S000005038	P	Phosphatidate phosphatase APP1	UniProtKB:P53933|PTN002000342	protein	taxon:559292	20170228	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0044255) -- `SGD	S000003247	EAT1	involved_in	GO:0044255	GO_REF:0000033	IBA	PANTHER:PTN002919262|SGD:S000003263	P	Ethanol acetyltransferase 1	UniProtKB:P53208|PTN002451218	protein	taxon:559292	20220331	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070774) -- `SGD	S000000387	YPC1	enables	GO:0070774	GO_REF:0000033	IBA	PANTHER:PTN000310820|UniProtKB:Q9NUN7|SGD:S000000387|MGI:MGI:1913440	F	Alkaline ceramidase YPC1	UniProtKB:P38298|PTN000310913	protein	taxon:559292	20200810	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070774) -- `SGD	S000006008	YDC1	enables	GO:0070774	GO_REF:0000033	IBA	PANTHER:PTN000310820|UniProtKB:Q9NUN7|SGD:S000000387|MGI:MGI:1913440	F	Alkaline ceramidase YDC1	UniProtKB:Q02896|PTN000310914	protein	taxon:559292	20200810	GO_Central		
`
### gorule-0000022

Check for, and filter, annotations made to retracted publications

* total: 0
### gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

* total: 0
### gorule-0000029

IEAs should be less than one year old.

* total: 0
### gorule-0000030

Obsolete GO_REFs are not allowed

* total: 0
### gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

* total: 0
### gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

* total: 0
### gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

* total: 0
### gorule-0000043

Check for valid combination of evidence code and GO_REF

* total: 0
### gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

* total: 1
#### Messages
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `SGD	S000003863	VPS25	enables	GO:0042803	GO_REF:0000033	IBA	PANTHER:PTN000322234|UniProtKB:Q9BRG1	F	Vacuolar protein-sorting-associated protein 25	UniProtKB:P47142|PTN000322275	protein	taxon:559292	20170228	GO_Central		
`
### gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

* total: 0
### gorule-0000055

References should have only one ID per ID space

* total: 0
### gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

* total: 0
### gorule-0000061

Allowed gene product to term relations (gp2term)

* total: 45
#### Messages
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000001388	STH1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN001649185|MGI:MGI:1935129|SGD:S000001388|SGD:S000005831|MGI:MGI:95453|PomBase:SPAC25A8.01c|UniProtKB:O60264|UniProtKB:P51531|PomBase:SPAC1250.01|PomBase:SPCC1620.14c|FB:FBgn0000212|CGD:CAL0000193582|TAIR:locus:2173644|MGI:MGI:99603|FB:FBgn0011604|MGI:MGI:88192|RGD:621728|SGD:S000000449|CGD:CAL0000176922|UniProtKB:Q585S8|UniProtKB:P51532|WB:WBGene00002169|SGD:S000005816|UniProtKB:P28370|MGI:MGI:1935127|SGD:S000000017|TAIR:locus:2182978|TAIR:locus:2081081	C	Nuclear protein STH1_NPS1	UniProtKB:P32597|PTN000084871	protein	taxon:559292	20240304	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000002450	NRG1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000360827|MGI:MGI:99150|TAIR:locus:1005716361|UniProtKB:P25490|FB:FBgn0002521	C	Transcriptional regulator NRG1	UniProtKB:Q03125|PTN000149122	protein	taxon:559292	20240206	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000001431	CSS1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN005310620|MGI:MGI:1289273|RGD:620079	C	Secreted protein CSS1	UniProtKB:P40442|PTN004626591	protein	taxon:559292	20220330	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000003704	SET2	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN002739645|WB:WBGene00003222|FB:FBgn0039559|TAIR:locus:2126714	C	Histone-lysine N-methyltransferase, H3 lysine-36 specific	UniProtKB:P46995|PTN002556494	protein	taxon:559292	20240206	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000001934	IRC5	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN001649185|MGI:MGI:1935129|SGD:S000001388|SGD:S000005831|MGI:MGI:95453|PomBase:SPAC25A8.01c|UniProtKB:O60264|UniProtKB:P51531|PomBase:SPAC1250.01|PomBase:SPCC1620.14c|FB:FBgn0000212|CGD:CAL0000193582|TAIR:locus:2173644|MGI:MGI:99603|FB:FBgn0011604|MGI:MGI:88192|RGD:621728|SGD:S000000449|CGD:CAL0000176922|UniProtKB:Q585S8|UniProtKB:P51532|WB:WBGene00002169|SGD:S000005816|UniProtKB:P28370|MGI:MGI:1935127|SGD:S000000017|TAIR:locus:2182978|TAIR:locus:2081081	C	Uncharacterized ATP-dependent helicase IRC5	UniProtKB:P43610|PTN000085489	protein	taxon:559292	20240304	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000003880	JHD2	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000075014|UniProtKB:Q336N8|UniProtKB:Q9H3R0|FB:FBgn0033233|MGI:MGI:2442355|PomBase:SPAC343.11c|FB:FBgn0036004|PomBase:SPBP19A11.06|MGI:MGI:2446210|FB:FBgn0031759|MGI:MGI:1924054|RGD:1307528|MGI:MGI:3606484	C	Histone demethylase JHD2	UniProtKB:P47156|PTN000075162	protein	taxon:559292	20230510	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000000966	CHD1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN002473914|FB:FBgn0262519|PomBase:SPAC1783.05|RGD:1582725|PomBase:SPBP35G2.10|UniProtKB:Q14839|UniProtKB:Q12873|FB:FBgn0023395|SGD:S000000966|MGI:MGI:1344395|MGI:MGI:1344380|MGI:MGI:3036258	C	Chromo domain-containing protein 1	UniProtKB:P32657|PTN000084654	protein	taxon:559292	20240801	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000002503	GIS1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000075014|UniProtKB:Q336N8|UniProtKB:Q9H3R0|FB:FBgn0033233|MGI:MGI:2442355|PomBase:SPAC343.11c|FB:FBgn0036004|PomBase:SPBP19A11.06|MGI:MGI:2446210|FB:FBgn0031759|MGI:MGI:1924054|RGD:1307528|MGI:MGI:3606484	C	Transcriptional activator_repressor GIS1	UniProtKB:Q03833|PTN002242406	protein	taxon:559292	20230510	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000003651	ASF1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000247832|UniProtKB:Q9NVP2|TAIR:locus:2033359|UniProtKB:Q9Y294|MGI:MGI:1914179	C	Histone chaperone ASF1	UniProtKB:P32447|PTN000247904	protein	taxon:559292	20240205	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000005816	SNF2	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN001649185|MGI:MGI:1935129|SGD:S000001388|SGD:S000005831|MGI:MGI:95453|PomBase:SPAC25A8.01c|UniProtKB:O60264|UniProtKB:P51531|PomBase:SPAC1250.01|PomBase:SPCC1620.14c|FB:FBgn0000212|CGD:CAL0000193582|TAIR:locus:2173644|MGI:MGI:99603|FB:FBgn0011604|MGI:MGI:88192|RGD:621728|SGD:S000000449|CGD:CAL0000176922|UniProtKB:Q585S8|UniProtKB:P51532|WB:WBGene00002169|SGD:S000005816|UniProtKB:P28370|MGI:MGI:1935127|SGD:S000000017|TAIR:locus:2182978|TAIR:locus:2081081	C	Transcription regulatory protein SNF2	UniProtKB:P22082|PTN000084874	protein	taxon:559292	20240304	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000000104	HIR1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000352669|TAIR:locus:2076013|UniProtKB:P54198|MGI:MGI:99430	C	Protein HIR1	UniProtKB:P32479|PTN000352717	protein	taxon:559292	20240206	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000004441	FPR4	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN001314507|PomBase:SPBC1347.02|FB:FBgn0013269|SGD:S000004441	C	FK506-binding protein 4	UniProtKB:Q06205|PTN000054244	protein	taxon:559292	20240801	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000001927	SMC2	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000434684|FB:FBgn0027783|PomBase:SPBP4H10.06c|WB:WBGene00003367	C	Structural maintenance of chromosomes protein 2	UniProtKB:P38989|PTN000434737	protein	taxon:559292	20220416	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000004539	FPR3	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN001314507|PomBase:SPBC1347.02|FB:FBgn0013269|SGD:S000004441	C	Peptidyl-prolyl cis-trans isomerase	UniProtKB:P38911|PTN000054245	protein	taxon:559292	20240801	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000002599	HST4	part_of	GO:0031934	GO_REF:0000033	IBA	PANTHER:PTN000872167|PomBase:SPAC1783.04c	C	NAD-dependent histone deacetylase HST4	UniProtKB:P53688|PTN000119288	protein	taxon:559292	20180419	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000001288	IRR1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000127652|UniProtKB:Q8WVM7|PomBase:SPCC4E9.01c|PomBase:SPAC17H9.20|UniProtKB:Q8N3U4|FB:FBgn0020616|WB:WBGene00004738|MGI:MGI:1098658|MGI:MGI:1098583	C	Cohesin subunit SCC3	UniProtKB:P40541|PTN000127764	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000006226	YPR022C	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c	C	Zinc finger protein YPR022C	UniProtKB:Q12139|PTN005124056	protein	taxon:559292	20201216	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000005871	TYE7	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN001757366|SGD:S000005871|PomBase:SPBC354.05c|PomBase:SPBC19C2.09	C	Serine-rich protein TYE7	UniProtKB:P33122|PTN005341349	protein	taxon:559292	20230720	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000005190	VPS75	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000221934|SGD:S000005190|PomBase:SPBC36B7.08c|UniProtKB:Q8I2W3	C	Vacuolar protein sorting-associated protein 75	UniProtKB:P53853|PTN000222298	protein	taxon:559292	20231108	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000004674	MOT3	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c	C	Transcriptional activator_repressor MOT3	UniProtKB:P54785|PTN008674436	protein	taxon:559292	20201216	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000002398	ADY3	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000434684|FB:FBgn0027783|PomBase:SPBP4H10.06c|WB:WBGene00003367	C	Accumulates dyads protein 3	UniProtKB:Q07732|PTN008686950	protein	taxon:559292	20220416	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000002228	BDF2	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000524852|PomBase:SPAC631.02|MGI:MGI:1888520|SGD:S000004391|PomBase:SPCC1450.02	C	Bromodomain-containing factor 2	UniProtKB:Q07442|PTN000524786	protein	taxon:559292	20210812	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000003888	RSF2	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c	C	Respiration factor 2	UniProtKB:P46974|PTN002868491	protein	taxon:559292	20201216	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000003299	YGR067C	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c	C	Zinc finger protein YGR067C	UniProtKB:P53243|PTN005124018	protein	taxon:559292	20201216	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000005831	ISW2	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN001649185|MGI:MGI:1935129|SGD:S000001388|SGD:S000005831|MGI:MGI:95453|PomBase:SPAC25A8.01c|UniProtKB:O60264|UniProtKB:P51531|PomBase:SPAC1250.01|PomBase:SPCC1620.14c|FB:FBgn0000212|CGD:CAL0000193582|TAIR:locus:2173644|MGI:MGI:99603|FB:FBgn0011604|MGI:MGI:88192|RGD:621728|SGD:S000000449|CGD:CAL0000176922|UniProtKB:Q585S8|UniProtKB:P51532|WB:WBGene00002169|SGD:S000005816|UniProtKB:P28370|MGI:MGI:1935127|SGD:S000000017|TAIR:locus:2182978|TAIR:locus:2081081	C	ISWI chromatin-remodeling complex ATPase ISW2	UniProtKB:Q08773|PTN002246355	protein	taxon:559292	20240304	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000000449	ISW1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN001649185|MGI:MGI:1935129|SGD:S000001388|SGD:S000005831|MGI:MGI:95453|PomBase:SPAC25A8.01c|UniProtKB:O60264|UniProtKB:P51531|PomBase:SPAC1250.01|PomBase:SPCC1620.14c|FB:FBgn0000212|CGD:CAL0000193582|TAIR:locus:2173644|MGI:MGI:99603|FB:FBgn0011604|MGI:MGI:88192|RGD:621728|SGD:S000000449|CGD:CAL0000176922|UniProtKB:Q585S8|UniProtKB:P51532|WB:WBGene00002169|SGD:S000005816|UniProtKB:P28370|MGI:MGI:1935127|SGD:S000000017|TAIR:locus:2182978|TAIR:locus:2081081	C	ISWI chromatin-remodeling complex ATPase ISW1	UniProtKB:P38144|PTN002246362	protein	taxon:559292	20240304	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000000148	SAS3	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN004172926|UniProtKB:Q8WYB5|SGD:S000005770|UniProtKB:O95251|CGD:CAL0000179231|UniProtKB:Q92794|TAIR:locus:2144776|MGI:MGI:1919307|PomBase:SPAC637.12c|FB:FBgn0034975|TAIR:locus:2174764|MGI:MGI:2182799|ZFIN:ZDB-GENE-021022-3|SGD:S000000148	C	Histone acetyltransferase SAS3	UniProtKB:P34218|PTN000065246	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000000521	DCC1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000333642|UniProtKB:Q9BVC3	C	Sister chromatid cohesion protein DCC1	UniProtKB:P25559|PTN000333691	protein	taxon:559292	20170228	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000000629	SNT1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN004449530|RGD:1310293|UniProtKB:O75376|SGD:S000000629|UniProtKB:Q9Y618	C	Probable DNA-binding protein SNT1	UniProtKB:P25357|PTN000513695	protein	taxon:559292	20240206	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000004546	TDA9	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c	C	Probable transcription factor TDA9	UniProtKB:Q04545|PTN002868493	protein	taxon:559292	20201216	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000005682	NFI1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000081660|SGD:S000002817|WB:WBGene00001574|SGD:S000005682|FB:FBgn0026160	C	E3 SUMO-protein ligase SIZ2	UniProtKB:Q12216|PTN000081841	protein	taxon:559292	20240205	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000000971	RPH1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000075014|UniProtKB:Q336N8|UniProtKB:Q9H3R0|FB:FBgn0033233|MGI:MGI:2442355|PomBase:SPAC343.11c|FB:FBgn0036004|PomBase:SPBP19A11.06|MGI:MGI:2446210|FB:FBgn0031759|MGI:MGI:1924054|RGD:1307528|MGI:MGI:3606484	C	DNA damage-responsive transcriptional repressor RPH1	UniProtKB:P39956|PTN000075323	protein	taxon:559292	20230510	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000002817	SIZ1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000081660|SGD:S000002817|WB:WBGene00001574|SGD:S000005682|FB:FBgn0026160	C	E3 SUMO-protein ligase SIZ1	UniProtKB:Q04195|PTN000081842	protein	taxon:559292	20240205	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000005770	ESA1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN004172926|UniProtKB:Q8WYB5|SGD:S000005770|UniProtKB:O95251|CGD:CAL0000179231|UniProtKB:Q92794|TAIR:locus:2144776|MGI:MGI:1919307|PomBase:SPAC637.12c|FB:FBgn0034975|TAIR:locus:2174764|MGI:MGI:2182799|ZFIN:ZDB-GENE-021022-3|SGD:S000000148	C	Histone acetyltransferase ESA1	UniProtKB:Q08649|PTN000065247	protein	taxon:559292	20240729	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000004788	ECM5	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000075014|UniProtKB:Q336N8|UniProtKB:Q9H3R0|FB:FBgn0033233|MGI:MGI:2442355|PomBase:SPAC343.11c|FB:FBgn0036004|PomBase:SPBP19A11.06|MGI:MGI:2446210|FB:FBgn0031759|MGI:MGI:1924054|RGD:1307528|MGI:MGI:3606484	C	Protein ECM5	UniProtKB:Q03214|PTN000075159	protein	taxon:559292	20230510	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000000017	FUN30	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN001649185|MGI:MGI:1935129|SGD:S000001388|SGD:S000005831|MGI:MGI:95453|PomBase:SPAC25A8.01c|UniProtKB:O60264|UniProtKB:P51531|PomBase:SPAC1250.01|PomBase:SPCC1620.14c|FB:FBgn0000212|CGD:CAL0000193582|TAIR:locus:2173644|MGI:MGI:99603|FB:FBgn0011604|MGI:MGI:88192|RGD:621728|SGD:S000000449|CGD:CAL0000176922|UniProtKB:Q585S8|UniProtKB:P51532|WB:WBGene00002169|SGD:S000005816|UniProtKB:P28370|MGI:MGI:1935127|SGD:S000000017|TAIR:locus:2182978|TAIR:locus:2081081	C	ATP-dependent helicase FUN30	UniProtKB:P31380|PTN000084307	protein	taxon:559292	20240304	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000005558	HMS1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN001757366|SGD:S000005871|PomBase:SPBC354.05c|PomBase:SPBC19C2.09	C	Probable transcription factor HMS1	UniProtKB:Q12398|PTN000179767	protein	taxon:559292	20230720	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000005364	SIN3	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000269659|FB:FBgn0022764|PomBase:SPBC12C2.10c|TAIR:locus:2194559|UniProtKB:Q96ST3|SGD:S000005364|RGD:1311598|TAIR:locus:2032382|PomBase:SPAC23C11.15|TAIR:locus:2147845|TAIR:locus:2100277|PomBase:SPBC1734.16c|TAIR:locus:2025956	C	Transcriptional regulatory protein SIN3	UniProtKB:P22579|PTN000269730	protein	taxon:559292	20240730	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000004681	PDS5	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000292173|UniProtKB:Q29RF7|PomBase:SPAC110.02|UniProtKB:Q9NTI5	C	Sister chromatid cohesion protein PDS5	UniProtKB:Q04264|PTN000292247	protein	taxon:559292	20211216	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000001923	ECO1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000118027|UniProtKB:Q5FWF5|UniProtKB:Q56NI9|MGI:MGI:1919238	C	N-acetyltransferase ECO1	UniProtKB:P43605|PTN000118098	protein	taxon:559292	20220417	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000000270	NRG2	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000360827|MGI:MGI:99150|TAIR:locus:1005716361|UniProtKB:P25490|FB:FBgn0002521	C	Probable transcriptional regulator NRG2	UniProtKB:P38082|PTN000360882	protein	taxon:559292	20240206	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000001756	NAP1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000221934|SGD:S000005190|PomBase:SPBC36B7.08c|UniProtKB:Q8I2W3	C	Nucleosome assembly protein	UniProtKB:P25293|PTN000222077	protein	taxon:559292	20231108	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000002624	ADR1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN008083030|PomBase:SPAC6F12.02|PomBase:SPAC1039.05c	C	Regulatory protein ADR1	UniProtKB:P07248|PTN002812233	protein	taxon:559292	20201216	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000004391	BDF1	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000524852|PomBase:SPAC631.02|MGI:MGI:1888520|SGD:S000004391|PomBase:SPCC1450.02	C	Bromodomain-containing factor 1	UniProtKB:P35817|PTN000524787	protein	taxon:559292	20210812	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0001025, RO:0002325, RO:0002432. Repaired to RO:0001025 -- `SGD	S000005564	HIR2	part_of	GO:0000785	GO_REF:0000033	IBA	PANTHER:PTN000352669|TAIR:locus:2076013|UniProtKB:P54198|MGI:MGI:99430	C	Protein HIR2	UniProtKB:P32480|PTN000352714	protein	taxon:559292	20240206	GO_Central		
`
### gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

* total: 0
### gorule-0000064

TreeGrafter IEAs should be filtered for GO reference species

* total: 0
### other

* total: 0