# GORULE violations assigned by Alzheimers_University_of_Toronto

## SUMMARY

This report generated on 2024-07-20

## Contents

[gorule-0000008](#gorule-0000008)[No annotations should be made to uninformative high level terms]{}

[gorule-0000027](#gorule-0000027)[Each identifier in GAF is valid]{}

[gorule-0000061](#gorule-0000061)[Allowed gene product to term relations (gp2term)]{}

## MESSAGES

###gorule-0000008

No annotations should be made to uninformative high level terms

* total: 2
#### Messages
* WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`MGI	MGI:1351646	Abca7	involved_in	GO:0018149	PMID:12917409	IDA		P	ATP-binding cassette sub-family A member 7		protein	taxon:10090	20140409	Alzheimers_University_of_Toronto		
`
* WARNING - Violates GO Rule:GORULE:0000008: No annotations should be made to uninformatively high level terms--`UniProtKB	Q8IZY2	ABCA7	involved_in	GO:0018149	GO_REF:0000024	ISS	UniProtKB:Q91V24	P	Phospholipid-transporting ATPase ABCA7	ABCA7	protein	taxon:9606	20140515	Alzheimers_University_of_Toronto		UniProtKB:Q8IZY2
`

###gorule-0000027

Each identifier in GAF is valid

* total: 13
#### Messages
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	enables	GO:0048156	PMID:23399914	IPI	UniProtKB:P10637	F	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140313	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	involved_in	GO:0043065	GO_REF:0000024	ISS	UniProtKB:O00499	P	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	involved_in	GO:0045664	GO_REF:0000024	ISS	UniProtKB:O00499	P	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	involved_in	GO:0048711	GO_REF:0000024	ISS	UniProtKB:O00499	P	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	involved_in	GO:0060988	GO_REF:0000024	ISS	UniProtKB:O00499	P	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	located_in	GO:0005874	GO_REF:0000024	ISS	UniProtKB:P30622	C	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	located_in	GO:0030018	GO_REF:0000024	ISS	UniProtKB:O08839	C	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	located_in	GO:0030315	GO_REF:0000024	ISS	UniProtKB:O08839	C	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	located_in	GO:0030424	GO_REF:0000024	ISS	UniProtKB:O00499	C	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	located_in	GO:0031674	GO_REF:0000024	ISS	UniProtKB:O08839	C	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	located_in	GO:0033268	GO_REF:0000024	ISS	UniProtKB:O08839	C	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	located_in	GO:0043194	GO_REF:0000024	ISS	UniProtKB:O08839	C	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`
* WARNING - Invalid identifier:GORULE:0000027: 108092 does not match any id_syntax patterns for MGI in dbxrefs--`MGI	MGI:108092	Bin1	part_of	GO:0060987	GO_REF:0000024	ISS	UniProtKB:O00499	C	Myc box-dependent-interacting protein 1		protein	taxon:10090	20140515	Alzheimers_University_of_Toronto		
`

###gorule-0000061

Allowed gene product to term relations (gp2term)

* total: 2
#### Messages
* WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`MGI	MGI:104908	Ptk2b	is_active_in	GO:0017146	GO_REF:0000024	ISS	UniProtKB:P70600	C	Protein-tyrosine kinase 2-beta		protein	taxon:10090	20240117	Alzheimers_University_of_Toronto		
`
* WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`UniProtKB	Q14289	PTK2B	is_active_in	GO:0017146	GO_REF:0000024	ISS	UniProtKB:P70600	C	Protein-tyrosine kinase 2-beta	PTK2B|FAK2|PYK2|RAFTK	protein	taxon:9606	20240117	Alzheimers_University_of_Toronto		UniProtKB:Q14289
`