{
    "group": "pseudocap",
    "dataset": "pseudocap",
    "lines": 5466,
    "skipped_lines": 1848,
    "associations": 3617,
    "messages": {
        "other": [],
        "gorule-0000001": [
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0033\thptC\t\tGO:0009927\t\tISS\t\tF\tHistidine phosphotransfer protein HptC\tHistidine phosphotransfer protein HptC|hptC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0031\tbetC\t\tGO:0050896\t\tISS\t\tP\tcholine sulfatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0036\ttrpB\t\tGO:0016833\t\tISS\t\tF\ttryptophan synthase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0051\tphzH\t\tGO:0002047\t\tISS\t\tP\tpotential phenazine-modifying enzyme\tprobable glutamine amidotransferase|phzH\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0051\tphzH\t\tGO:0003824\t\tISS\t\tF\tpotential phenazine-modifying enzyme\tprobable glutamine amidotransferase|phzH\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0106\tcoxA\t\tGO:0006091\t\tISS\t\tP\tcytochrome c oxidase, subunit I\tcoI\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0108\tcoIII\t\tGO:0004096\t\tISS\t\tF\tcytochrome c oxidase, subunit III\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0108\tcoIII\t\tGO:0006091\t\tISS\t\tP\tcytochrome c oxidase, subunit III\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0132\tbauA\t\tGO:0006520\t\tISS\t\tP\tBeta-alanine:pyruvate transaminase\toapT|omega-amino acid--pyruvate transaminase|Beta-alanine:pyruvate transaminase|bauA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0139\tahpC\t\tGO:0050896\t\tISS\t\tP\talkyl hydroperoxide reductase subunit C\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0140\tahpF\t\tGO:0050896\t\tISS\t\tP\talkyl hydroperoxide reductase subunit F\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0143\tnuh\t\tGO:0009117\t\tIDA\t\tP\tpurine nucleosidase Nuh\tnucleoside hydrolase|purine nucleosidase Nuh\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0153\tpcaH\t\tGO:0015976\t\tISS\t\tP\tprotocatechuate 3,4-dioxygenase, beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0153\tpcaH\t\tGO:0044248\t\tISS\t\tP\tprotocatechuate 3,4-dioxygenase, beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0154\tpcaG\t\tGO:0015976\t\tISS\t\tP\tprotocatechuate 3,4-dioxygenase, alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0154\tpcaG\t\tGO:0044248\t\tISS\t\tP\tprotocatechuate 3,4-dioxygenase, alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0155\tpcaR\t\tGO:0006355\t\tISS\t\tP\ttranscriptional regulator PcaR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0155\tpcaR\t\tGO:0015976\t\tISS\t\tP\ttranscriptional regulator PcaR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0155\tpcaR\t\tGO:0044248\t\tISS\t\tP\ttranscriptional regulator PcaR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0195\tpntAA\t\tGO:0006091\t\tISS\t\tP\tputative NAD(P) transhydrogenase, subunit alpha part 1\tpntAA|putative NAD(P) transhydrogenase, subunit alpha part 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0195\tpntAA\t\tGO:0006810\t\tISS\t\tP\tputative NAD(P) transhydrogenase, subunit alpha part 1\tpntAA|putative NAD(P) transhydrogenase, subunit alpha part 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0208\tmdcA\t\tGO:0015976\t\tISS\t\tP\tmalonate decarboxylase alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0208\tmdcA\t\tGO:0044248\t\tISS\t\tP\tmalonate decarboxylase alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0210\tmdcC\t\tGO:0015976\t\tISS\t\tP\tmalonate decarboxylase delta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0210\tmdcC\t\tGO:0044248\t\tISS\t\tP\tmalonate decarboxylase delta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0211\tmdcD\t\tGO:0015976\t\tISS\t\tP\tmalonate decarboxylase beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0211\tmdcD\t\tGO:0044248\t\tISS\t\tP\tmalonate decarboxylase beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0212\tmdcE\t\tGO:0015976\t\tISS\t\tP\tmalonate decarboxylase gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0212\tmdcE\t\tGO:0044248\t\tISS\t\tP\tmalonate decarboxylase gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0228\tpcaF\t\tGO:0015976\t\tISS\t\tP\tbeta-ketoadipyl CoA thiolase PcaF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0228\tpcaF\t\tGO:0044248\t\tISS\t\tP\tbeta-ketoadipyl CoA thiolase PcaF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0228\tpcaF\t\tGO:0044255\t\tISS\t\tP\tbeta-ketoadipyl CoA thiolase PcaF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0229\tpcaT\t\tGO:0006810\t\tISS\t\tP\tdicarboxylic acid transporter PcaT\tkgtP|alpha-ketoglutarate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0229\tpcaT\t\tGO:0016020\t\tISS\t\tC\tdicarboxylic acid transporter PcaT\tkgtP|alpha-ketoglutarate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0230\tpcaB\t\tGO:0015976\t\tISS\t\tP\t3-carboxy-cis,cis-muconate cycloisomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0230\tpcaB\t\tGO:0044248\t\tISS\t\tP\t3-carboxy-cis,cis-muconate cycloisomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0231\tpcaD\t\tGO:0015976\t\tISS\t\tP\tbeta-ketoadipate enol-lactone hydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0231\tpcaD\t\tGO:0044248\t\tISS\t\tP\tbeta-ketoadipate enol-lactone hydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0235\tpcaK\t\tGO:0006810\t\tISS\t\tP\t4-hydroxybenzoate transporter PcaK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0235\tpcaK\t\tGO:0015976\t\tISS\t\tP\t4-hydroxybenzoate transporter PcaK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0235\tpcaK\t\tGO:0016020\t\tISS\t\tC\t4-hydroxybenzoate transporter PcaK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0235\tpcaK\t\tGO:0019439\t\tISS\t\tP\t4-hydroxybenzoate transporter PcaK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0235\tpcaK\t\tGO:0044248\t\tISS\t\tP\t4-hydroxybenzoate transporter PcaK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0245\taroQ2\t\tGO:0000162\t\tISS\t\tP\t3-dehydroquinate dehydratase\taroD2|dehydroquinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0245\taroQ2\t\tGO:0004334\t\tISS\t\tF\t3-dehydroquinate dehydratase\taroD2|dehydroquinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0245\taroQ2\t\tGO:0006520\t\tISS\t\tP\t3-dehydroquinate dehydratase\taroD2|dehydroquinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0245\taroQ2\t\tGO:0006571\t\tISS\t\tP\t3-dehydroquinate dehydratase\taroD2|dehydroquinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0245\taroQ2\t\tGO:0009094\t\tISS\t\tP\t3-dehydroquinate dehydratase\taroD2|dehydroquinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0280\tcysA\t\tGO:0006810\t\tISS\t\tP\tsulfate transport protein CysA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0281\tcysW\t\tGO:0006810\t\tISS\t\tP\tsulfate transport protein CysW\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0281\tcysW\t\tGO:0016020\t\tISS\t\tC\tsulfate transport protein CysW\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0282\tcysT\t\tGO:0006810\t\tISS\t\tP\tsulfate transport protein CysT\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0282\tcysT\t\tGO:0016020\t\tISS\t\tC\tsulfate transport protein CysT\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0283\tsbp\t\tGO:0006810\t\tISS\t\tP\tsulfate-binding protein precursor\tsulfate starvation-induced protein 2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0302\tspuF\t\tGO:0006810\t\tISS\t\tP\tpolyamine transport protein PotG\tpotG|spuF\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0303\tspuG\t\tGO:0006810\t\tISS\t\tP\tpolyamine transport protein PotH\tpotH|spuG\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0303\tspuG\t\tGO:0016020\t\tISS\t\tC\tpolyamine transport protein PotH\tpotH|spuG\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0304\tspuH\t\tGO:0006810\t\tISS\t\tP\tpolyamine transport protein PotI\tpotI|spuH\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0304\tspuH\t\tGO:0016020\t\tISS\t\tC\tpolyamine transport protein PotI\tpotI|spuH\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0331\tilvA1\t\tGO:0004612\t\tISS\t\tF\tthreonine dehydratase, biosynthetic\tthreonine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0331\tilvA1\t\tGO:0006520\t\tISS\t\tP\tthreonine dehydratase, biosynthetic\tthreonine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0331\tilvA1\t\tGO:0006544\t\tISS\t\tP\tthreonine dehydratase, biosynthetic\tthreonine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0331\tilvA1\t\tGO:0006563\t\tISS\t\tP\tthreonine dehydratase, biosynthetic\tthreonine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0331\tilvA1\t\tGO:0006566\t\tISS\t\tP\tthreonine dehydratase, biosynthetic\tthreonine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0336\trppH\t\tGO:0009117\t\tISS\t\tP\tRNA pyrophosphohydrolase, RppH\tdinucleoside oligophosphate pyrophosphatase|ygdP|Nudix hydrolase YgdP|Nudix hydrolase YgdP|ygdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0355\tpfpI\t\tGO:0044267\t\tISS\t\tP\tprotease PfpI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0375\tftsX\t\tGO:0043093\t\tISS\t\tP\tcell division protein FtsX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0382\tmicA\t\tGO:0006259\t\tISS\t\tP\tDNA mismatch repair protein MicA\tyggH\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0390\tmetX\t\tGO:0006520\t\tISS\t\tP\thomoserine O-acetyltransferase\tmet2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0390\tmetX\t\tGO:0006790\t\tISS\t\tP\thomoserine O-acetyltransferase\tmet2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0390\tmetX\t\tGO:0008137\t\tISS\t\tF\thomoserine O-acetyltransferase\tmet2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0401\tPA0401\t\tGO:0009117\t\tISS\t\tP\tnoncatalytic dihydroorotase-like protein\tpyrC'|pyrX\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0402\tpyrB\t\tGO:0004355\t\tISS\t\tF\taspartate carbamoyltransferase\taspartate transcarbamoylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0402\tpyrB\t\tGO:0006220\t\tISS\t\tP\taspartate carbamoyltransferase\taspartate transcarbamoylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0402\tpyrB\t\tGO:0006520\t\tISS\t\tP\taspartate carbamoyltransferase\taspartate transcarbamoylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0402\tpyrB\t\tGO:0006522\t\tISS\t\tP\taspartate carbamoyltransferase\taspartate transcarbamoylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0402\tpyrB\t\tGO:0006531\t\tISS\t\tP\taspartate carbamoyltransferase\taspartate transcarbamoylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0402\tpyrB\t\tGO:0009117\t\tISS\t\tP\taspartate carbamoyltransferase\taspartate transcarbamoylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0403\tpyrR\t\tGO:0006355\t\tISS\t\tP\ttranscriptional regulator PyrR\turacil phosphoribosyltransferase PyrR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0403\tpyrR\t\tGO:0008168\t\tISS\t\tF\ttranscriptional regulator PyrR\turacil phosphoribosyltransferase PyrR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0403\tpyrR\t\tGO:0009117\t\tISS\t\tP\ttranscriptional regulator PyrR\turacil phosphoribosyltransferase PyrR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0420\tbioA\t\tGO:0004801\t\tISS\t\tF\tadenosylmethionine-8-amino-7-oxononanoate aminotransferase\t7,8-diamino-pelargonic acid aminotransferase DAPA aminotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0420\tbioA\t\tGO:0006768\t\tISS\t\tP\tadenosylmethionine-8-amino-7-oxononanoate aminotransferase\t7,8-diamino-pelargonic acid aminotransferase DAPA aminotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0420\tbioA\t\tGO:0051188\t\tISS\t\tP\tadenosylmethionine-8-amino-7-oxononanoate aminotransferase\t7,8-diamino-pelargonic acid aminotransferase DAPA aminotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0426\tmexB\t\tGO:0006811\t\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexB\tRND multidrug efflux transporter MexB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0437\tcodA\t\tGO:0004568\t\tISS\t\tF\tcytosine deaminase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0437\tcodA\t\tGO:0009117\t\tISS\t\tP\tcytosine deaminase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0438\tcodB\t\tGO:0006810\t\tISS\t\tP\tcytosine permease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0438\tcodB\t\tGO:0009117\t\tISS\t\tP\tcytosine permease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0464\tcreC\t\tGO:0000160\t\tISS\t\tP\ttwo-component sensor CreC\tphoM\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0511\tnirJ\t\tGO:0006091\t\tIDA\t\tP\theme d1 biosynthesis protein NirJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0511\tnirJ\t\tGO:0006783\t\tIDA\t\tP\theme d1 biosynthesis protein NirJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0511\tnirJ\t\tGO:0051188\t\tIDA\t\tP\theme d1 biosynthesis protein NirJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0516\tnirF\t\tGO:0006091\t\tIDA\t\tP\theme d1 biosynthesis protein NirF\tcytochrome oxidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0516\tnirF\t\tGO:0051188\t\tIDA\t\tP\theme d1 biosynthesis protein NirF\tcytochrome oxidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0527\tdnr\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator Dnr\tdissimilative nitrate respiration regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0527\tdnr\t\tGO:0019333\t\tIDA\t\tP\ttranscriptional regulator Dnr\tdissimilative nitrate respiration regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0527\tdnr\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator Dnr\tdissimilative nitrate respiration regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0534\tpauB1\t\tGO:0006598\t\tISS\t\tP\tFAD-dependent oxidoreductase\tFAD-dependent oxidoreductase|pauB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0576\trpoD\t\tGO:0006355\t\tIDA\t\tP\tsigma factor RpoD\trpoDA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0580\tgcp\t\tGO:0004125\t\tISS\t\tF\tO-sialoglycoprotein endopeptidase\tygjD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0580\tgcp\t\tGO:0044267\t\tISS\t\tP\tO-sialoglycoprotein endopeptidase\tygjD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0582\tfolB\t\tGO:0051188\t\tISS\t\tP\tdihydroneopterin aldolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0590\tapaH\t\tGO:0006163\t\tISS\t\tP\tbis(5'-nucleosyl)-tetraphosphatase\tdiadenosine tetraphosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0590\tapaH\t\tGO:0008864\t\tISS\t\tF\tbis(5'-nucleosyl)-tetraphosphatase\tdiadenosine tetraphosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0590\tapaH\t\tGO:0009117\t\tISS\t\tP\tbis(5'-nucleosyl)-tetraphosphatase\tdiadenosine tetraphosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0592\tksgA\t\tGO:0004411\t\tISS\t\tF\trRNA (adenine-N6,N6)-dimethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0592\tksgA\t\tGO:0016070\t\tISS\t\tP\trRNA (adenine-N6,N6)-dimethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0593\tpdxA\t\tGO:0042816\t\tISS\t\tP\tpyridoxal phosphate biosynthetic protein PdxA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0593\tpdxA\t\tGO:0051188\t\tISS\t\tP\tpyridoxal phosphate biosynthetic protein PdxA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0595\tlptD\t\tGO:0050896\t\tISS\t\tP\tLPS-assembly protein LptD\timp|lptD|ostA|LPS-assembly protein LptD|organic solvent tolerance protein OstA precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0609\ttrpE\t\tGO:0006091\t\tIDA\t\tP\tanthranilate synthetase component I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0609\ttrpE\t\tGO:0006520\t\tIDA\t\tP\tanthranilate synthetase component I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0609\ttrpE\t\tGO:0006558\t\tIDA\t\tP\tanthranilate synthetase component I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0609\ttrpE\t\tGO:0006744\t\tIDA\t\tP\tanthranilate synthetase component I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0610\tprtN\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator PrtN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0654\tspeD\t\tGO:0008152\t\tISS\t\tP\tS-adenosylmethionine decarboxylase proenzyme\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0662\targC\t\tGO:0006520\t\tISS\t\tP\tN-acetyl-gamma-glutamyl-phosphate reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0662\targC\t\tGO:0008800\t\tIDA\t\tF\tN-acetyl-gamma-glutamyl-phosphate reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0668\ttyrZ\t\tGO:0004106\t\tISS\t\tF\ttyrosyl-tRNA synthetase 2\ttyrS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0668\ttyrZ\t\tGO:0006520\t\tISS\t\tP\ttyrosyl-tRNA synthetase 2\ttyrS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0668\ttyrZ\t\tGO:0006568\t\tISS\t\tP\ttyrosyl-tRNA synthetase 2\ttyrS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0668\ttyrZ\t\tGO:0043039\t\tISS\t\tP\ttyrosyl-tRNA synthetase 2\ttyrS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0668\ttyrZ\t\tGO:0044267\t\tISS\t\tP\ttyrosyl-tRNA synthetase 2\ttyrS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0674\tvreA\t\tGO:0015291\t\t\t\tF\tVreA\tpigC|vreA|VreA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0676\tvreR\t\tGO:0016987\t\t\t\tF\tsigma factor regulator, VreR\tvreR|sigma factor regulator, VreR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0681\thxcT\t\tGO:0046903\t\tIDA\t\tP\tHxcT\thxcT|HxcT|HxcT pseudopilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0688\tlapA\t\tGO:0003674\t\tISS\t\tF\tlow-molecular-weight alkaline phosphatase A, LapA\tlapA|low-molecular-weight alkaline phosphatase A, LapA|probable binding protein component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0688\tlapA\t\tGO:0005575\t\tISS\t\tC\tlow-molecular-weight alkaline phosphatase A, LapA\tlapA|low-molecular-weight alkaline phosphatase A, LapA|probable binding protein component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0688\tlapA\t\tGO:0006810\t\tISS\t\tP\tlow-molecular-weight alkaline phosphatase A, LapA\tlapA|low-molecular-weight alkaline phosphatase A, LapA|probable binding protein component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0688\tlapA\t\tGO:0008150\t\tISS\t\tP\tlow-molecular-weight alkaline phosphatase A, LapA\tlapA|low-molecular-weight alkaline phosphatase A, LapA|probable binding protein component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0694\texbD2\t\tGO:0006810\t\tISS\t\tP\ttransport protein ExbD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0694\texbD2\t\tGO:0016020\t\tISS\t\tC\ttransport protein ExbD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0706\tcat\t\tGO:0046677\t\tIDA\t\tP\tchloramphenicol acetyltransferase\txenobiotic acetyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:2000154\t\t\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0765\tmucC\t\tGO:0006355\t\tIDA\t\tP\tpositive regulator for alginate biosynthesis MucC\tAlgM\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0765\tmucC\t\tGO:0009276\t\tIDA\t\tC\tpositive regulator for alginate biosynthesis MucC\tAlgM\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0780\tpruR\t\tGO:0006355\t\tIDA\t\tP\tproline utilization regulator\tprobable transcriptional regulator|pruR|proline utilization regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0780\tpruR\t\tGO:0006562\t\tIDA\t\tP\tproline utilization regulator\tprobable transcriptional regulator|pruR|proline utilization regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0780\tpruR\t\tGO:0006355\t\tIDA\t\tP\tproline utilization regulator\tprobable transcriptional regulator|pruR|proline utilization regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0792\tprpD\t\tGO:0015976\t\tISS\t\tP\tpropionate catabolic protein PrpD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0792\tprpD\t\tGO:0044248\t\tISS\t\tP\tpropionate catabolic protein PrpD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0826.1\tPA0826.1\t\tGO:0006520\t\tISS\t\tP\ttranslated portion of tmRNA gene ssrA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0831\toruR\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator OruR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0845\tcerN\t\tGO:0051872\t\tIDA\t\tP\tCerN\tCerN|cerN\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0847\tPA0847\t\tGO:0009975\t\t\t\tF\tdiguanylate cyclase\tdiguanylate cyclase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0849\ttrxB2\t\tGO:0006220\t\tISS\t\tP\tthioredoxin reductase 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0849\ttrxB2\t\tGO:0009117\t\tISS\t\tP\tthioredoxin reductase 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0865\thpd\t\tGO:0006520\t\tISS\t\tP\t4-hydroxyphenylpyruvate dioxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0865\thpd\t\tGO:0016763\t\tIDA\t\tF\t4-hydroxyphenylpyruvate dioxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0872\tphhA\t\tGO:0006520\t\tIDA\t\tP\tphenylalanine-4-hydroxylase\tphenylalanine 4-monooxygenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0872\tphhA\t\tGO:0006571\t\tIDA\t\tP\tphenylalanine-4-hydroxylase\tphenylalanine 4-monooxygenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0873\tphhR\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator PhhR\ttyrR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0887\tacsA\t\tGO:0004823\t\tISS\t\tF\tacetyl-coenzyme A synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0887\tacsA\t\tGO:0006090\t\tISS\t\tP\tacetyl-coenzyme A synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0887\tacsA\t\tGO:0008152\t\tISS\t\tP\tacetyl-coenzyme A synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0887\tacsA\t\tGO:0015976\t\tISS\t\tP\tacetyl-coenzyme A synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0887\tacsA\t\tGO:0019541\t\tISS\t\tP\tacetyl-coenzyme A synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0887\tacsA\t\tGO:0019643\t\tISS\t\tP\tacetyl-coenzyme A synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0887\tacsA\t\tGO:0044248\t\tISS\t\tP\tacetyl-coenzyme A synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0888\taotJ\t\tGO:0006810\t\tIDA\t\tP\targinine/ornithine binding protein AotJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0893\targR\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator ArgR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0897\taruG\t\tGO:0006520\t\tIDA\t\tP\tsubunit II of arginine N2-succinyltransferase = ornithine N2-succinyltransferase\tsubunit II of arginine N2-succinyltransferase = ornithine N2-succinyltransferase|arginine/ornithine succinyltransferase AII subunit|aruAII\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0898\taruD\t\tGO:0006520\t\tIDA\t\tP\tN-Succinylglutamate 5-semialdehyde dehydrogenase\tastD|N-Succinylglutamate 5-semialdehyde dehydrogenase|succinylglutamate 5-semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0899\taruB\t\tGO:0006520\t\tIDA\t\tP\tN2-Succinylarginine dihydrolase\tN2-Succinylarginine dihydrolase|succinylarginine dihydrolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0901\taruE\t\tGO:0006520\t\tIDA\t\tP\tN-Succinylglutamate desuccinylase\tastE|N-Succinylglutamate desuccinylase|succinylglutamate desuccinylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0903\talaS\t\tGO:0004829\t\tISS\t\tF\talanyl-tRNA synthetase\tsya\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0903\talaS\t\tGO:0016070\t\tISS\t\tP\talanyl-tRNA synthetase\tsya\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0903\talaS\t\tGO:0044267\t\tISS\t\tP\talanyl-tRNA synthetase\tsya\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0929\tPA0929\t\tGO:0006810\t\tISS\t\tP\ttwo-component response regulator\tpirR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0930\tPA0930\t\tGO:0000160\t\tISS\t\tP\ttwo-component sensor\tpirS|histidine protein kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0930\tPA0930\t\tGO:0006810\t\tISS\t\tP\ttwo-component sensor\tpirS|histidine protein kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0932\tcysM\t\tGO:0004333\t\tISS\t\tF\tcysteine synthase B\tO-acetylserine sulfhydrylase B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0932\tcysM\t\tGO:0006520\t\tISS\t\tP\tcysteine synthase B\tO-acetylserine sulfhydrylase B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0932\tcysM\t\tGO:0006790\t\tISS\t\tP\tcysteine synthase B\tO-acetylserine sulfhydrylase B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0934\trelA\t\tGO:0052381\t\tISS\t\tF\tGTP pyrophosphokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0934\trelA\t\tGO:0050896\t\tISS\t\tP\tGTP pyrophosphokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0936\tlpxO2\t\tGO:0003824\t\tISS\t\tF\tlipopolysaccharide biosynthetic protein LpxO2\tlpxO2|lipopolysaccharide biosynthetic protein Lpx02\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0936\tlpxO2\t\tGO:0009276\t\tISS\t\tC\tlipopolysaccharide biosynthetic protein LpxO2\tlpxO2|lipopolysaccharide biosynthetic protein Lpx02\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0944\tpurN\t\tGO:0000104\t\tISS\t\tF\tphosphoribosylaminoimidazole synthetase\tphosphoribosylformylglycinamidine cyclo-ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0944\tpurN\t\tGO:0009117\t\tISS\t\tP\tphosphoribosylaminoimidazole synthetase\tphosphoribosylformylglycinamidine cyclo-ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0949\twrbA\t\tGO:0016070\t\tISS\t\tP\tTrp repressor binding protein WrbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0949\twrbA\t\tGO:0003674\t\t\t\tF\tTrp repressor binding protein WrbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0956\tproS\t\tGO:0006520\t\tISS\t\tP\tprolyl-tRNA synthetase\tproline aminoacyl tRNA synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0956\tproS\t\tGO:0006525\t\tISS\t\tP\tprolyl-tRNA synthetase\tproline aminoacyl tRNA synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0956\tproS\t\tGO:0006560\t\tISS\t\tP\tprolyl-tRNA synthetase\tproline aminoacyl tRNA synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0956\tproS\t\tGO:0044267\t\tISS\t\tP\tprolyl-tRNA synthetase\tproline aminoacyl tRNA synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0969\ttolQ\t\tGO:0006810\t\tIDA\t\tP\tTolQ protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0969\ttolQ\t\tGO:0016020\t\tIDA\t\tC\tTolQ protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0970\ttolR\t\tGO:0006810\t\tIDA\t\tP\tTolR protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0984\tPA0984\t\tGO:0016020\t\tISS\t\tC\tcolicin immunity protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0991\thptA\t\tGO:0009927\t\tISS\t\tF\tHistidine phosphotransfer protein HptA\tHistidine phosphotransfer protein HptA|hptA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0992\tcupC1\t\tGO:0006928\t\tISS\t\tP\tfimbrial subunit CupC1\tprobable fimbrial subunit protein|cupC1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0996\tpqsA\t\tGO:0051188\t\tISS\t\tP\tPqsA\tpqsA|PqsA|probable coenzyme A ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1000\tpqsE\t\tGO:0051188\t\tIDA\t\tP\tQuinolone signal response protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1008\tbcp\t\tGO:0050896\t\tISS\t\tP\tbacterioferritin comigratory protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1010\tdapA\t\tGO:0003855\t\tISS\t\tF\tdihydrodipicolinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1010\tdapA\t\tGO:0006520\t\tISS\t\tP\tdihydrodipicolinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1010\tdapA\t\tGO:0009085\t\tISS\t\tP\tdihydrodipicolinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1013\tpurC\t\tGO:0004357\t\tISS\t\tF\tphosphoribosylaminoimidazole-succinocarboxamide synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1013\tpurC\t\tGO:0006163\t\tISS\t\tP\tphosphoribosylaminoimidazole-succinocarboxamide synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1013\tpurC\t\tGO:0009117\t\tISS\t\tP\tphosphoribosylaminoimidazole-succinocarboxamide synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1017\tpauA\t\tGO:0051188\t\tISS\t\tP\tpimeloyl-CoA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1019\tmucK\t\tGO:0006810\t\tISS\t\tP\tcis,cis-muconate transporter MucK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1019\tmucK\t\tGO:0016020\t\tISS\t\tC\tcis,cis-muconate transporter MucK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1070\tbraG\t\tGO:0006810\t\tIDA\t\tP\tbranched-chain amino acid transport protein BraG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1071\tbraF\t\tGO:0006810\t\tIDA\t\tP\tbranched-chain amino acid transport protein BraF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1072\tbraE\t\tGO:0006810\t\tIDA\t\tP\tbranched-chain amino acid transport protein BraE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1072\tbraE\t\tGO:0016020\t\tIDA\t\tC\tbranched-chain amino acid transport protein BraE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1073\tbraD\t\tGO:0006810\t\tIDA\t\tP\tbranched-chain amino acid transport protein BraD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1073\tbraD\t\tGO:0016020\t\tIDA\t\tC\tbranched-chain amino acid transport protein BraD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1080\tflgE\t\tGO:0006928\t\tISS\t\tP\tflagellar hook protein FlgE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1080\tflgE\t\tGO:0009276\t\tISS\t\tC\tflagellar hook protein FlgE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1080\tflgE\t\tGO:0009296\t\tISS\t\tP\tflagellar hook protein FlgE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:0045785\t\tIMP\t\tP\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:0044212\t\t\t\tF\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1099\tfleR\t\tGO:0006355\t\tIDA\t\tP\ttwo-component response regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1101\tfliF\t\tGO:0006928\t\tIDA\t\tP\tFlagella M-ring outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1101\tfliF\t\tGO:0009276\t\tIDA\t\tC\tFlagella M-ring outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1101\tfliF\t\tGO:0009296\t\tIDA\t\tP\tFlagella M-ring outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1105\tfliJ\t\tGO:0006928\t\tISS\t\tP\tflagellar protein FliJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1105\tfliJ\t\tGO:0009276\t\tISS\t\tC\tflagellar protein FliJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1121\tyfiR\t\tGO:0042597\t\tIDA\t\tC\tYfiR\tyfiR|YfiR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1124\tdgt\t\tGO:0004605\t\tISS\t\tF\tdeoxyguanosinetriphosphate triphosphohydrolase\tdGTP triphosphohydrolase|dGTPase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1124\tdgt\t\tGO:0006163\t\tISS\t\tP\tdeoxyguanosinetriphosphate triphosphohydrolase\tdGTP triphosphohydrolase|dGTPase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1124\tdgt\t\tGO:0009117\t\tISS\t\tP\tdeoxyguanosinetriphosphate triphosphohydrolase\tdGTP triphosphohydrolase|dGTPase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1161\trrmA\t\tGO:0016070\t\tISS\t\tP\trRNA methyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1162\tdapE\t\tGO:0004530\t\tISS\t\tF\tsuccinyl-diaminopimelate desuccinylase\tN-succinyl-diaminopimelate deacylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1162\tdapE\t\tGO:0006520\t\tISS\t\tP\tsuccinyl-diaminopimelate desuccinylase\tN-succinyl-diaminopimelate deacylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1162\tdapE\t\tGO:0006554\t\tISS\t\tP\tsuccinyl-diaminopimelate desuccinylase\tN-succinyl-diaminopimelate deacylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1173\tnapB\t\tGO:0006091\t\tISS\t\tP\tcytochrome c-type protein NapB precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1173\tnapB\t\tGO:0006807\t\tISS\t\tP\tcytochrome c-type protein NapB precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1174\tnapA\t\tGO:0004450\t\tISS\t\tF\tperiplasmic nitrate reductase protein NapA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1174\tnapA\t\tGO:0006091\t\tISS\t\tP\tperiplasmic nitrate reductase protein NapA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1180\tphoQ\t\tGO:0000160\t\tISS\t\tP\ttwo-component sensor PhoQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1273\tcobB\t\tGO:0051188\t\tISS\t\tP\tcobyrinic acid a,c-diamide synthase\tcbiA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1278\tcobP\t\tGO:0051188\t\tISS\t\tP\tcobinamide kinase\tcobU\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1279\tcobU\t\tGO:0004129\t\tISS\t\tF\tnicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase\tcobT|cobalamin biosynthesis protein cobU\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1279\tcobU\t\tGO:0009236\t\tISS\t\tP\tnicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase\tcobT|cobalamin biosynthesis protein cobU\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1279\tcobU\t\tGO:0051188\t\tISS\t\tP\tnicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase\tcobT|cobalamin biosynthesis protein cobU\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1281\tcobV\t\tGO:0051188\t\tISS\t\tP\tcobalamin (5'-phosphate) synthase\tcobS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1294\trnd\t\tGO:0008728\t\tISS\t\tF\tribonuclease D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1294\trnd\t\tGO:0016070\t\tISS\t\tP\tribonuclease D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1302\tPA1302\t\tGO:0022857\t\t\t\tF\tprobable heme utilization protein precursor\thxuC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1318\tcyoB\t\tGO:0006091\t\tISS\t\tP\tcytochrome o ubiquinol oxidase subunit I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1319\tcyoC\t\tGO:0006091\t\tISS\t\tP\tcytochrome o ubiquinol oxidase subunit III\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1320\tcyoD\t\tGO:0006091\t\tISS\t\tP\tcytochrome o ubiquinol oxidase subunit IV\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1321\tcyoE\t\tGO:0006091\t\tISS\t\tP\tcytochrome o ubiquinol oxidase protein CyoE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1326\tilvA2\t\tGO:0004609\t\tISS\t\tF\tthreonine dehydratase, biosynthetic\tthreonine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1326\tilvA2\t\tGO:0006520\t\tISS\t\tP\tthreonine dehydratase, biosynthetic\tthreonine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1326\tilvA2\t\tGO:0006544\t\tISS\t\tP\tthreonine dehydratase, biosynthetic\tthreonine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1326\tilvA2\t\tGO:0006563\t\tISS\t\tP\tthreonine dehydratase, biosynthetic\tthreonine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1326\tilvA2\t\tGO:0006566\t\tISS\t\tP\tthreonine dehydratase, biosynthetic\tthreonine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1337\tansB\t\tGO:0006520\t\tISS\t\tP\tglutaminase-asparaginase\tpga\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1337\tansB\t\tGO:0006522\t\tISS\t\tP\tglutaminase-asparaginase\tpga\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1337\tansB\t\tGO:0006807\t\tISS\t\tP\tglutaminase-asparaginase\tpga\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1337\tansB\t\tGO:0008854\t\tISS\t\tF\tglutaminase-asparaginase\tpga\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1337\tansB\t\tGO:0004067\t\t\t\tF\tglutaminase-asparaginase\tpga\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1342\taatJ\t\tGO:0043190\t\tISS\t\tC\tAatJ\tAatJ|aatJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1376\taceK\t\tGO:0008152\t\tISS\t\tP\tisocitrate dehydrogenase kinase/phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1376\taceK\t\tGO:0008999\t\tISS\t\tF\tisocitrate dehydrogenase kinase/phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1376\taceK\t\tGO:0019752\t\tISS\t\tP\tisocitrate dehydrogenase kinase/phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1376\taceK\t\tGO:0046487\t\tISS\t\tP\tisocitrate dehydrogenase kinase/phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1444\tfliN\t\tGO:0006928\t\tIDA\t\tP\tflagellar motor switch protein FliN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1444\tfliN\t\tGO:0006935\t\tIDA\t\tP\tflagellar motor switch protein FliN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1444\tfliN\t\tGO:0050896\t\tIDA\t\tP\tflagellar motor switch protein FliN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1445\tfliO\t\tGO:0006928\t\tISS\t\tP\tflagellar protein FliO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1445\tfliO\t\tGO:0006935\t\tISS\t\tP\tflagellar protein FliO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1445\tfliO\t\tGO:0050896\t\tISS\t\tP\tflagellar protein FliO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1446\tfliP\t\tGO:0006928\t\tISS\t\tP\tflagellar biosynthetic protein FliP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1446\tfliP\t\tGO:0006935\t\tISS\t\tP\tflagellar biosynthetic protein FliP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1446\tfliP\t\tGO:0050896\t\tISS\t\tP\tflagellar biosynthetic protein FliP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1455\tfliA\t\tGO:0006355\t\tIDA\t\tP\tsigma factor FliA\trpoF\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1475\tccmA\t\tGO:0006810\t\tISS\t\tP\theme exporter protein CcmA\thelA|cycV\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1481\tccmG\t\tGO:0006091\t\tISS\t\tP\tcytochrome C biogenesis protein CcmG\tdsbE|Thiol:disulfide interchange protein DsbE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1482\tccmH\t\tGO:0006091\t\tISS\t\tP\tcytochrome C-type biogenesis protein CcmH\tcycL|ccl2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1493\tcysP\t\tGO:0006810\t\tISS\t\tP\tsulfate-binding protein of ABC transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1505\tmoaA2\t\tGO:0051188\t\tISS\t\tP\tmolybdopterin biosynthetic protein A2\tmolybdenum cofactor biosynthetic protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1523\txdhB\t\tGO:0009117\t\tISS\t\tP\txanthine dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1524\txdhA\t\tGO:0004096\t\tIDA\t\tF\txanthine dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1524\txdhA\t\tGO:0009117\t\tISS\t\tP\txanthine dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1546\themN\t\tGO:0051188\t\tIDA\t\tP\toxygen-independent coproporphyrinogen III oxidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1596\thtpG\t\tGO:0006457\t\tISS\t\tP\theat shock protein HtpG\tchaperone Hsp90\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1670\tstp1\t\tGO:0044267\t\tIDA\t\tP\tStp1\tStp1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1671\tstk1\t\tGO:0044267\t\tISS\t\tP\tStk1\tStk1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1681\taroC\t\tGO:0000162\t\tISS\t\tP\tchorismate synthase\t5-enolpyruvylshikimate-3-phosphate phospholyase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1681\taroC\t\tGO:0004397\t\tISS\t\tF\tchorismate synthase\t5-enolpyruvylshikimate-3-phosphate phospholyase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1681\taroC\t\tGO:0006520\t\tISS\t\tP\tchorismate synthase\t5-enolpyruvylshikimate-3-phosphate phospholyase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1681\taroC\t\tGO:0006571\t\tISS\t\tP\tchorismate synthase\t5-enolpyruvylshikimate-3-phosphate phospholyase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1681\taroC\t\tGO:0009094\t\tISS\t\tP\tchorismate synthase\t5-enolpyruvylshikimate-3-phosphate phospholyase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1687\tspeE\t\tGO:0000050\t\tISS\t\tP\tspermidine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1687\tspeE\t\tGO:0004808\t\tISS\t\tF\tspermidine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1687\tspeE\t\tGO:0006520\t\tISS\t\tP\tspermidine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1687\tspeE\t\tGO:0019482\t\tISS\t\tP\tspermidine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1690\tpscU\t\tGO:0030254\t\tISS\t\tP\ttranslocation protein in type III secretion\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1690\tpscU\t\tGO:0046903\t\tISS\t\tP\ttranslocation protein in type III secretion\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1693\tpscR\t\tGO:0030254\t\tISS\t\tP\ttranslocation protein in type III secretion\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1693\tpscR\t\tGO:0046903\t\tISS\t\tP\ttranslocation protein in type III secretion\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1694\tpscQ\t\tGO:0030254\t\tISS\t\tP\ttranslocation protein in type III secretion\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1695\tpscP\t\tGO:0030254\t\tISS\t\tP\ttranslocation protein in type III secretion\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1696\tpscO\t\tGO:0030254\t\tISS\t\tP\ttranslocation protein in type III secretion\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1697\tPA1697\t\tGO:0030254\t\tISS\t\tP\tATP synthase in type III secretion system\tpscN\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1697\tPA1697\t\tGO:0046903\t\tISS\t\tP\tATP synthase in type III secretion system\tpscN\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1727\tmucR\t\tGO:0009975\t\t\t\tF\tMucR\tmucR|MucR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1742\tpauD2\t\tGO:0006598\t\tISS\t\tP\tGlutamine amidotransferase class I\tGlutamine amidotransferase class I|pauD2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1770\tppsA\t\tGO:0006091\t\tISS\t\tP\tphosphoenolpyruvate synthase\twater dikinase|PEP synthase|Pyruvate\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1771\testX\t\tGO:0003824\t\tIDA\t\tF\tEstX\testX|EstX\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1773\tcmaX\t\tGO:0016020\t\tIDA\t\tC\tCmaX protein\tcmaX|CmaX protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1774\tcrfX\t\tGO:0003674\t\tIDA\t\tF\tCrfX protein\tcrfX|CrfX protein|cfrX|CfrX protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1774\tcrfX\t\tGO:0005575\t\tIDA\t\tC\tCrfX protein\tcrfX|CrfX protein|cfrX|CfrX protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1774\tcrfX\t\tGO:0008150\t\tIDA\t\tP\tCrfX protein\tcrfX|CrfX protein|cfrX|CfrX protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1775\tcmpX\t\tGO:0003674\t\tIDA\t\tF\tconserved cytoplasmic membrane protein, CmpX protein\tcmpX|conserved cytoplasmic membrane protein, CmpX\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1775\tcmpX\t\tGO:0005575\t\tIDA\t\tC\tconserved cytoplasmic membrane protein, CmpX protein\tcmpX|conserved cytoplasmic membrane protein, CmpX\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1775\tcmpX\t\tGO:0008150\t\tIDA\t\tP\tconserved cytoplasmic membrane protein, CmpX protein\tcmpX|conserved cytoplasmic membrane protein, CmpX\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1775\tcmpX\t\tGO:0016020\t\tIDA\t\tC\tconserved cytoplasmic membrane protein, CmpX protein\tcmpX|conserved cytoplasmic membrane protein, CmpX\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1776\tsigX\t\tGO:0006355\t\tIDA\t\tP\tECF sigma factor SigX\tsigX|ECF sigma factor, SigX\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1777\toprF\t\tGO:0006810\t\tIDA\t\tP\tMajor porin and structural outer membrane porin OprF precursor\tPorin F\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1778\tcobA\t\tGO:0015994\t\tISS\t\tP\turoporphyrin-III C-methyltransferase\tS-adenosyl-L-methionine:uroporphyrinogen III\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1778\tcobA\t\tGO:0051188\t\tISS\t\tP\turoporphyrin-III C-methyltransferase\tS-adenosyl-L-methionine:uroporphyrinogen III\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1780\tnirD\t\tGO:0006807\t\tISS\t\tP\tassimilatory nitrite reductase small subunit\tnasE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1780\tnirD\t\tGO:0008152\t\tISS\t\tP\tassimilatory nitrite reductase small subunit\tnasE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1780\tnirD\t\tGO:0008720\t\tISS\t\tF\tassimilatory nitrite reductase small subunit\tnasE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1783\tnasA\t\tGO:0006807\t\tISS\t\tP\tnitrate transporter\tnasT\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1783\tnasA\t\tGO:0006810\t\tISS\t\tP\tnitrate transporter\tnasT\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1783\tnasA\t\tGO:0016020\t\tISS\t\tC\tnitrate transporter\tnasT\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1787\tacnB\t\tGO:0006091\t\tISS\t\tP\taconitate hydratase 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1793\tppiB\t\tGO:0006457\t\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase B\tcypB|PPIase B|Rotamase B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1794\tglnS\t\tGO:0006520\t\tISS\t\tP\tglutaminyl-tRNA synthetase\tglutamine-tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1794\tglnS\t\tGO:0044267\t\tISS\t\tP\tglutaminyl-tRNA synthetase\tglutamine-tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1795\tcysS\t\tGO:0004825\t\tISS\t\tF\tcysteinyl-tRNA synthetase\tcysteine-tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1795\tcysS\t\tGO:0006520\t\tISS\t\tP\tcysteinyl-tRNA synthetase\tcysteine-tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1795\tcysS\t\tGO:0006534\t\tISS\t\tP\tcysteinyl-tRNA synthetase\tcysteine-tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1795\tcysS\t\tGO:0043039\t\tISS\t\tP\tcysteinyl-tRNA synthetase\tcysteine-tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1795\tcysS\t\tGO:0044267\t\tISS\t\tP\tcysteinyl-tRNA synthetase\tcysteine-tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1796\tfolD\t\tGO:0009117\t\tISS\t\tP\t5,10-methylene-tetrahydrofolate dehydrogenase / cyclohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1796\tfolD\t\tGO:0051188\t\tISS\t\tP\t5,10-methylene-tetrahydrofolate dehydrogenase / cyclohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1800\ttig\t\tGO:0006457\t\tISS\t\tP\ttrigger factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1800\ttig\t\tGO:0043093\t\tISS\t\tP\ttrigger factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1802\tclpX\t\tGO:0003983\t\tISS\t\tF\tClpX\theat shock protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1802\tclpX\t\tGO:0006457\t\tISS\t\tP\tClpX\theat shock protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1812\tmltD\t\tGO:0006040\t\tISS\t\tP\tmembrane-bound lytic murein transglycosylase D precursor\tdniR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1812\tmltD\t\tGO:0006520\t\tISS\t\tP\tmembrane-bound lytic murein transglycosylase D precursor\tdniR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1812\tmltD\t\tGO:0008773\t\tISS\t\tF\tmembrane-bound lytic murein transglycosylase D precursor\tdniR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1812\tmltD\t\tGO:0009276\t\tISS\t\tC\tmembrane-bound lytic murein transglycosylase D precursor\tdniR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1820\tnhaB\t\tGO:0006810\t\tISS\t\tP\tsodium/proton antiporter NhaB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1820\tnhaB\t\tGO:0016020\t\tISS\t\tC\tsodium/proton antiporter NhaB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1838\tcysI\t\tGO:0008152\t\tIDA\t\tP\tsulfite reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1846\tcti\t\tGO:0044255\t\tISS\t\tP\tcis/trans isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1858\tstr\t\tGO:0046677\t\tISS\t\tP\tstreptomycin 3''-phosphotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1861\tmodC\t\tGO:0006810\t\tISS\t\tP\tmolybdenum transport protein ModC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1862\tmodB\t\tGO:0006810\t\tISS\t\tP\tmolybdenum transport protein ModB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1863\tmodA\t\tGO:0006810\t\tISS\t\tP\tmolybdate-binding periplasmic protein precursor ModA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1868\txqhA\t\tGO:0046903\t\tIDA\t\tP\tsecretion protein XqhA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1898\tqscR\t\tGO:0006355\t\tISS\t\tP\tquorum-sensing control repressor\tphzR|qscR|quorum-sensing control repressor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1910\tfemA\t\tGO:0004872\t\t\t\tF\tferric-mycobactin receptor, FemA\tufrA|femA|ferric-mycobactin receptor, FemA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1927\tmetE\t\tGO:0006520\t\tISS\t\tP\t5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase\tcobalamin-independent methionine synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1946\trbsB\t\tGO:0006810\t\tISS\t\tP\tbinding protein component precursor of ABC ribose transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1947\trbsA\t\tGO:0006810\t\tISS\t\tP\tribose transport protein RbsA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1948\trbsC\t\tGO:0006810\t\tISS\t\tP\tmembrane protein component of ABC ribose transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1949\trbsR\t\tGO:0015976\t\tISS\t\tP\tribose operon repressor RbsR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1949\trbsR\t\tGO:0044248\t\tISS\t\tP\tribose operon repressor RbsR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1959\tbacA\t\tGO:0050896\t\tISS\t\tP\tbacitracin resistance protein\tundecaprenol kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1971\tbraZ\t\tGO:0006810\t\tIDA\t\tP\tbranched chain amino acid transporter BraZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1973\tpqqF\t\tGO:0051188\t\tISS\t\tP\tpyrroloquinoline quinone biosynthesis protein F\tcoenzyme PQQ synthesis protein F\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1978\terbR\t\tGO:0000156\t\tIDA\t\tF\tresponse regulator ErbR\tagmR|glycerol metabolism activator|response regulator AgmR|erbR|response regulator ErbR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1979\teraS\t\tGO:0000155\t\tISS\t\tF\tsensor kinase, EraS\texaD|ExaD|eraS|sensor kinase, EraS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1982\texaA\t\tGO:0015976\t\tISS\t\tP\tquinoprotein ethanol dehydrogenase\tquinoprotein alcohol dehydrogenase|quinoprotein ethanol dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1982\texaA\t\tGO:0044248\t\tISS\t\tP\tquinoprotein ethanol dehydrogenase\tquinoprotein alcohol dehydrogenase|quinoprotein ethanol dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1983\texaB\t\tGO:0006091\t\tIDA\t\tP\tcytochrome c550\tcytochrome c(EDH)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1983\texaB\t\tGO:0015976\t\tIDA\t\tP\tcytochrome c550\tcytochrome c(EDH)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1983\texaB\t\tGO:0044248\t\tIDA\t\tP\tcytochrome c550\tcytochrome c(EDH)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1985\tpqqA\t\tGO:0051188\t\tISS\t\tP\tpyrroloquinoline quinone biosynthesis protein A\tcoenzyme PQQ synthesis protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1986\tpqqB\t\tGO:0051188\t\tISS\t\tP\tpyrroloquinoline quinone biosynthesis protein B\tcoenzyme PQQ synthesis protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1987\tpqqC\t\tGO:0051188\t\tISS\t\tP\tpyrroloquinoline quinone biosynthesis protein C\tcoenzyme PQQ synthesis protein C\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1988\tpqqD\t\tGO:0051188\t\tISS\t\tP\tpyrroloquinoline quinone biosynthesis protein D\tcoenzyme PQQ synthesis protein D\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1989\tpqqE\t\tGO:0051188\t\tISS\t\tP\tpyrroloquinoline quinone biosynthesis protein E\tcoenzyme pqq synthesis protein E\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1996\tppiC1\t\tGO:0006457\t\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase C1\tParvulin, PPIase C|Rotamase C\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1996\tppiC1\t\tGO:0044267\t\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase C1\tParvulin, PPIase C|Rotamase C\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2001\tatoB\t\tGO:0008137\t\tISS\t\tF\tacetyl-CoA acetyltransferase\tacetoacetyl-CoA thiolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2001\tatoB\t\tGO:0008152\t\tISS\t\tP\tacetyl-CoA acetyltransferase\tacetoacetyl-CoA thiolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2001\tatoB\t\tGO:0044255\t\tISS\t\tP\tacetyl-CoA acetyltransferase\tacetoacetyl-CoA thiolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2003\tbdhA\t\tGO:0003858\t\tIDA\t\tF\t3-hydroxybutyrate dehydrogenase\tD-beta-hydroxybutyrate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2003\tbdhA\t\tGO:0015976\t\tISS\t\tP\t3-hydroxybutyrate dehydrogenase\tD-beta-hydroxybutyrate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2003\tbdhA\t\tGO:0044248\t\tISS\t\tP\t3-hydroxybutyrate dehydrogenase\tD-beta-hydroxybutyrate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2015\tliuA\t\tGO:0044248\t\tISS\t\tP\tputative isovaleryl-CoA dehydrogenase\tgnyD|ivd|Ivd|Citronelloyl-CoA dehydrogenase, GnyD|liuA|putative isovaleryl-CoA dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2016\tliuR\t\tGO:0006355\t\tIDA\t\tP\tregulator of liu genes\tgnyR|GnyR|liuR|regulator of liu genes|Regulatory gene of gnyRDBHAL cluster, GnyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0006810\t\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0016020\t\tISS\t\tC\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0046677\t\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0006811\t\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2019\tmexX\t\tGO:0046677\t\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tamrA|mexX|mexG|RND multidrug efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2025\tgor\t\tGO:0006520\t\tIDA\t\tP\tglutathione reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2025\tgor\t\tGO:0006536\t\tIDA\t\tP\tglutathione reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2025\tgor\t\tGO:0006749\t\tIDA\t\tP\tglutathione reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2025\tgor\t\tGO:0051188\t\tIDA\t\tP\tglutathione reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2040\tpauA4\t\tGO:0006598\t\tIDA\t\tP\tGlutamylpolyamine synthetase\tGlutamylpolyamine synthetase|pauA4\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2057\tsppR\t\tGO:0022857\t\t\t\tF\tTonB-dependent receptor, SppR\tsppR|TonB-dependent receptor, SppR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2064\tpcoB\t\tGO:0050896\t\tISS\t\tP\tcopper resistance protein B precursor\tcopB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2065\tpcoA\t\tGO:0050896\t\tISS\t\tP\tcopper resistance protein A precursor\tcopA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2070\tPA2070\t\tGO:0022857\t\t\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2071\tfusA2\t\tGO:0044267\t\tISS\t\tP\telongation factor G\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2081\tkynB\t\tGO:0005575\t\tIDA\t\tC\tkynurenine formamidase, KynB\tkynB|kynurenine formamidase, KynB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2081\tkynB\t\tGO:0006520\t\tIDA\t\tP\tkynurenine formamidase, KynB\tkynB|kynurenine formamidase, KynB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2081\tkynB\t\tGO:0008150\t\tIDA\t\tP\tkynurenine formamidase, KynB\tkynB|kynurenine formamidase, KynB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2089\tPA2089\t\tGO:0022857\t\t\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2118\tada\t\tGO:0006259\t\tISS\t\tP\tO6-methylguanine-DNA methyltransferase\ttranscriptional regulator Ada\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2118\tada\t\tGO:0006355\t\tISS\t\tP\tO6-methylguanine-DNA methyltransferase\ttranscriptional regulator Ada\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2128\tcupA1\t\tGO:0006928\t\tISS\t\tP\tfimbrial subunit CupA1\tprobable fimbrial protein (precursor)|component of adhesin|cupA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2129\tcupA2\t\tGO:0006457\t\tISS\t\tP\tchaperone CupA2\tprobable pili assembly chaperone|component of adhesin|cupA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2129\tcupA2\t\tGO:0006928\t\tISS\t\tP\tchaperone CupA2\tprobable pili assembly chaperone|component of adhesin|cupA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2130\tcupA3\t\tGO:0006928\t\tISS\t\tP\tusher CupA3\tprobable fimbrial biogenesis usher protein|cupA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2131\tcupA4\t\tGO:0006928\t\tIDA\t\tP\tfimbrial subunit CupA4\tcupA4|fimbrial subunit CupA4\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2132\tcupA5\t\tGO:0006457\t\tISS\t\tP\tchaperone CupA5\tprobable pili assembly chaperone|cupA5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2132\tcupA5\t\tGO:0006928\t\tISS\t\tP\tchaperone CupA5\tprobable pili assembly chaperone|cupA5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2144\tglgP\t\tGO:0009276\t\tISS\t\tC\tglycogen phosphorylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2147\tkatE\t\tGO:0050896\t\tISS\t\tP\tcatalase HPII\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2153\tglgB\t\tGO:0006091\t\tISS\t\tP\t1,4-alpha-glucan branching enzyme\tglycogen branching enzyme\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2185\tkatN\t\tGO:0050896\t\tISS\t\tP\tnon-heme catalase KatN\tkatN|non-heme catalase KatN\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2193\thcnA\t\tGO:0008152\t\tISS\t\tP\thydrogen cyanide synthase HcnA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2194\thcnB\t\tGO:0008152\t\tISS\t\tP\thydrogen cyanide synthase HcnB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2195\thcnC\t\tGO:0008152\t\tISS\t\tP\thydrogen cyanide synthase HcnC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2219\topdE\t\tGO:0006810\t\tIDA\t\tP\tmembrane protein OpdE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2219\topdE\t\tGO:0016020\t\tIDA\t\tC\tmembrane protein OpdE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2231\tpslA\t\tGO:0042710\t\tIDA\t\tP\tPslA\tPslA|pslA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2232\tpslB\t\tGO:0042710\t\tIDA\t\tP\tPslB\tPslB|pslB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2233\tpslC\t\tGO:0042710\t\tIDA\t\tP\tPslC\tPslC|pslC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2234\tpslD\t\tGO:0042710\t\tIDA\t\tP\tPslD\tPslD|pslD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2235\tpslE\t\tGO:0042710\t\tIDA\t\tP\tPslE\tPslE|pslE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2236\tpslF\t\tGO:0042710\t\tIDA\t\tP\tPslF\tPslF|pslF\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2237\tpslG\t\tGO:0042710\t\tIDA\t\tP\tPslG\tPslG|pslG\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2238\tpslH\t\tGO:0042710\t\tIDA\t\tP\tPslH\tPslH|pslH\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2239\tpslI\t\tGO:0042710\t\tIDA\t\tP\tPslI\tPslI|pslI\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2240\tpslJ\t\tGO:0042710\t\tIDA\t\tP\tPslJ\tPslJ|pslJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2241\tpslK\t\tGO:0042710\t\tIDA\t\tP\tPslL\tPslL|pslK\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2246\tbkdR\t\tGO:0006355\t\tISS\t\tP\ttranscriptional regulator BkdR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2246\tbkdR\t\tGO:0006550\t\tISS\t\tP\ttranscriptional regulator BkdR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2246\tbkdR\t\tGO:0006552\t\tISS\t\tP\ttranscriptional regulator BkdR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2246\tbkdR\t\tGO:0006574\t\tISS\t\tP\ttranscriptional regulator BkdR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2247\tbkdA1\t\tGO:0006520\t\tISS\t\tP\t2-oxoisovalerate dehydrogenase (alpha subunit)\tbranched-chain alpha-keto acid decarboxylase|3-methyl-2-oxobutanoate dehydrogenase (lipoamide)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2248\tbkdA2\t\tGO:0006520\t\tISS\t\tP\t2-oxoisovalerate dehydrogenase (beta subunit)\tbranched-chain alpha-keto acid decarboxylase|3-methyl-2-oxobutanoate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2249\tbkdB\t\tGO:0006520\t\tISS\t\tP\tbranched-chain alpha-keto acid dehydrogenase (lipoamide component)\tdihydrolipoamide branched chain transacylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2250\tlpdV\t\tGO:0006091\t\tISS\t\tP\tlipoamide dehydrogenase-Val\tlipoamide dehydrogenase (E3 subunit)|Lpd-Val\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2253\tansA\t\tGO:0006520\t\tISS\t\tP\tL-asparaginase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2253\tansA\t\tGO:0006531\t\tISS\t\tP\tL-asparaginase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2253\tansA\t\tGO:0006807\t\tISS\t\tP\tL-asparaginase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2253\tansA\t\tGO:0008854\t\tISS\t\tF\tL-asparaginase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2265\tPA2265\t\tGO:0015976\t\tISS\t\tP\tgluconate dehydrogenase\tgad\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2265\tPA2265\t\tGO:0044248\t\tISS\t\tP\tgluconate dehydrogenase\tgad\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2272\tpbpC\t\tGO:0009276\t\tIDA\t\tC\tpenicillin-binding protein 3A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2277\tarsR\t\tGO:0006355\t\tIDA\t\tP\tArsR protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2278\tarsB\t\tGO:0006810\t\tIDA\t\tP\tArsB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2278\tarsB\t\tGO:0016020\t\tIDA\t\tC\tArsB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2279\tarsC\t\tGO:0006810\t\tIDA\t\tP\tArsC protein\tarsenate reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2279\tarsC\t\tGO:0050896\t\tIDA\t\tP\tArsC protein\tarsenate reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2290\tgcd\t\tGO:0015976\t\tISS\t\tP\tglucose dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2300\tchiC\t\tGO:0003899\t\tISS\t\tF\tchitinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2300\tchiC\t\tGO:0015976\t\tISS\t\tP\tchitinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2300\tchiC\t\tGO:0044248\t\tISS\t\tP\tchitinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2321\tgntK\t\tGO:0006091\t\tISS\t\tP\tGntK\tgntV|gntK|gnuK|gluconate kinase|GntK|gluconokinase|gluconokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2321\tgntK\t\tGO:0015976\t\tISS\t\tP\tGntK\tgntV|gntK|gnuK|gluconate kinase|GntK|gluconokinase|gluconokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2321\tgntK\t\tGO:0044248\t\tISS\t\tP\tGntK\tgntV|gntK|gnuK|gluconate kinase|GntK|gluconokinase|gluconokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2322\tgntP\t\tGO:0006810\t\tISS\t\tP\tGntP\tgntU|gntT|gnuT|gntP|GntP|gluconate permease|gluconate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2337\tmtlR\t\tGO:0006355\t\tISS\t\tP\ttranscriptional regulator MtlR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2343\tmtlY\t\tGO:0003988\t\tISS\t\tF\txylulose kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2343\tmtlY\t\tGO:0015976\t\tISS\t\tP\txylulose kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2343\tmtlY\t\tGO:0044248\t\tISS\t\tP\txylulose kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2344\tmtlZ\t\tGO:0006000\t\tISS\t\tP\tfructokinase\tfrk\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2344\tmtlZ\t\tGO:0006013\t\tISS\t\tP\tfructokinase\tfrk\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2344\tmtlZ\t\tGO:0008959\t\tISS\t\tF\tfructokinase\tfrk\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2344\tmtlZ\t\tGO:0015976\t\tISS\t\tP\tfructokinase\tfrk\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2344\tmtlZ\t\tGO:0044248\t\tISS\t\tP\tfructokinase\tfrk\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2356\tmsuD\t\tGO:0006790\t\tIDA\t\tP\tmethanesulfonate sulfonatase MsuD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2356\tmsuD\t\tGO:0008152\t\tIDA\t\tP\tmethanesulfonate sulfonatase MsuD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2356\tmsuD\t\tGO:0015976\t\tIDA\t\tP\tmethanesulfonate sulfonatase MsuD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2356\tmsuD\t\tGO:0044248\t\tIDA\t\tP\tmethanesulfonate sulfonatase MsuD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2357\tmsuE\t\tGO:0006790\t\tIDA\t\tP\tNADH-dependent FMN reductase MsuE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2357\tmsuE\t\tGO:0008152\t\tIDA\t\tP\tNADH-dependent FMN reductase MsuE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2357\tmsuE\t\tGO:0015976\t\tIDA\t\tP\tNADH-dependent FMN reductase MsuE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2357\tmsuE\t\tGO:0044248\t\tIDA\t\tP\tNADH-dependent FMN reductase MsuE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2382\tlldA\t\tGO:0004362\t\tIDA\t\tF\tL-lactate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2382\tlldA\t\tGO:0006090\t\tISS\t\tP\tL-lactate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2382\tlldA\t\tGO:0006091\t\tISS\t\tP\tL-lactate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0050896\t\tIDA\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0009392\t\t\t\tF\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2386\tpvdA\t\tGO:0050896\t\tIDA\t\tP\tL-ornithine N5-oxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2392\tpvdP\t\tGO:0050896\t\tIDA\t\tP\tPvdP\tpvdP|PvdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2394\tpvdN\t\tGO:0050896\t\tIDA\t\tP\tPvdN\tpvdN|PvdN\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2395\tpvdO\t\tGO:0002049\t\tIDA\t\tP\tPvdO\tpvdO|PvdO\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2395\tpvdO\t\tGO:0050896\t\tIDA\t\tP\tPvdO\tpvdO|PvdO\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2396\tpvdF\t\tGO:0002049\t\tIDA\t\tP\tpyoverdine synthetase F\tpvdF|pyoverdine synthetase F\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2396\tpvdF\t\tGO:0050896\t\tIDA\t\tP\tpyoverdine synthetase F\tpvdF|pyoverdine synthetase F\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2397\tpvdE\t\tGO:0006810\t\tIDA\t\tP\tpyoverdine biosynthesis protein PvdE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2397\tpvdE\t\tGO:0016020\t\tIDA\t\tC\tpyoverdine biosynthesis protein PvdE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2397\tpvdE\t\tGO:0050896\t\tIDA\t\tP\tpyoverdine biosynthesis protein PvdE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2398\tfpvA\t\tGO:0006810\t\tIDA\t\tP\tferripyoverdine receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2399\tpvdD\t\tGO:0050896\t\tIDA\t\tP\tpyoverdine synthetase D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2400\tpvdJ\t\tGO:0050896\t\tISS\t\tP\tPvdJ\tPA2401|PvdJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2413\tpvdH\t\tGO:0050896\t\tISS\t\tP\tL-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tpvdH|L-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2414\tPA2414\t\tGO:0015976\t\tISS\t\tP\tL-sorbosone dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2414\tPA2414\t\tGO:0044248\t\tISS\t\tP\tL-sorbosone dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2416\ttreA\t\tGO:0015976\t\tISS\t\tP\tperiplasmic trehalase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2424\tpvdL\t\tGO:0050896\t\tIDA\t\tP\tPvdL\tpvdL|PvdL\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2425\tpvdG\t\tGO:0050896\t\tIDA\t\tP\tPvdG\tpvdG|PvdG\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2442\tgcvT2\t\tGO:0006520\t\tISS\t\tP\tglycine cleavage system protein T2\taminomethyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2442\tgcvT2\t\tGO:0008152\t\tISS\t\tP\tglycine cleavage system protein T2\taminomethyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2443\tsdaA\t\tGO:0006520\t\tISS\t\tP\tL-serine dehydratase\tL-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2444\tglyA2\t\tGO:0003863\t\tISS\t\tF\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2444\tglyA2\t\tGO:0006520\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2444\tglyA2\t\tGO:0006544\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2444\tglyA2\t\tGO:0006554\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2444\tglyA2\t\tGO:0006563\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2444\tglyA2\t\tGO:0006566\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2444\tglyA2\t\tGO:0015947\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2445\tgcvP2\t\tGO:0006520\t\tISS\t\tP\tglycine cleavage system protein P2\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2445\tgcvP2\t\tGO:0006544\t\tISS\t\tP\tglycine cleavage system protein P2\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2445\tgcvP2\t\tGO:0006563\t\tISS\t\tP\tglycine cleavage system protein P2\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2445\tgcvP2\t\tGO:0006566\t\tISS\t\tP\tglycine cleavage system protein P2\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2445\tgcvP2\t\tGO:0008152\t\tISS\t\tP\tglycine cleavage system protein P2\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2445\tgcvP2\t\tGO:0008693\t\tIDA\t\tF\tglycine cleavage system protein P2\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2446\tgcvH2\t\tGO:0006520\t\tISS\t\tP\tglycine cleavage system protein H2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2449\tgcsR\t\tGO:0006521\t\tIMP\t\tP\tGcsR\ttranscriptional regulator|gcsR|GcsR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2467\tfoxR\t\tGO:0005886\t\tISS\t\tC\tAnti-sigma factor FoxR\tfoxR|Anti-sigma factor FoxR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2470\tgtdA\t\tGO:0015976\t\tISS\t\tP\tgentisate 1,2-dioxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2470\tgtdA\t\tGO:0019439\t\tISS\t\tP\tgentisate 1,2-dioxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2470\tgtdA\t\tGO:0044248\t\tISS\t\tP\tgentisate 1,2-dioxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2476\tdsbG\t\tGO:0006457\t\tISS\t\tP\tthiol:disulfide interchange protein DsbG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2476\tdsbG\t\tGO:0044267\t\tISS\t\tP\tthiol:disulfide interchange protein DsbG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2492\tmexT\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator MexT\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2493\tmexE\t\tGO:0046677\t\tIDA\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexE precursor\tRND multidrug efflux membrane fusion protein MexE precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2494\tmexF\t\tGO:0006810\t\tIDA\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexF\tRND multidrug efflux transporter MexF\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2494\tmexF\t\tGO:0016020\t\tIDA\t\tC\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexF\tRND multidrug efflux transporter MexF\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2494\tmexF\t\tGO:0046677\t\tIDA\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexF\tRND multidrug efflux transporter MexF\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2494\tmexF\t\tGO:0006811\t\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexF\tRND multidrug efflux transporter MexF\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2495\toprN\t\tGO:0006810\t\tIDA\t\tP\tMultidrug efflux outer membrane protein OprN precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2495\toprN\t\tGO:0016020\t\tIDA\t\tC\tMultidrug efflux outer membrane protein OprN precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2495\toprN\t\tGO:0046677\t\tIDA\t\tP\tMultidrug efflux outer membrane protein OprN precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2507\tcatA\t\tGO:0015976\t\tISS\t\tP\tcatechol 1,2-dioxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2507\tcatA\t\tGO:0019439\t\tISS\t\tP\tcatechol 1,2-dioxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2507\tcatA\t\tGO:0044248\t\tISS\t\tP\tcatechol 1,2-dioxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2508\tcatC\t\tGO:0004750\t\tISS\t\tF\tmuconolactone delta-isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2508\tcatC\t\tGO:0015976\t\tISS\t\tP\tmuconolactone delta-isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2508\tcatC\t\tGO:0019439\t\tISS\t\tP\tmuconolactone delta-isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2508\tcatC\t\tGO:0044248\t\tISS\t\tP\tmuconolactone delta-isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2509\tcatB\t\tGO:0015976\t\tISS\t\tP\tmuconate cycloisomerase I\tcis|cis-muconate lactonizing enzyme I\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2510\tcatR\t\tGO:0015976\t\tISS\t\tP\ttranscriptional regulator CatR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2510\tcatR\t\tGO:0019439\t\tISS\t\tP\ttranscriptional regulator CatR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2510\tcatR\t\tGO:0044248\t\tISS\t\tP\ttranscriptional regulator CatR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2510\tcatR\t\tGO:0006355\t\tISS\t\tP\ttranscriptional regulator CatR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2512\tantA\t\tGO:0015976\t\tISS\t\tP\tanthranilate dioxygenase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2512\tantA\t\tGO:0019439\t\tISS\t\tP\tanthranilate dioxygenase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2512\tantA\t\tGO:0044248\t\tISS\t\tP\tanthranilate dioxygenase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2513\tantB\t\tGO:0015976\t\tISS\t\tP\tanthranilate dioxygenase small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2513\tantB\t\tGO:0019439\t\tISS\t\tP\tanthranilate dioxygenase small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2513\tantB\t\tGO:0044248\t\tISS\t\tP\tanthranilate dioxygenase small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2514\tantC\t\tGO:0015976\t\tISS\t\tP\tanthranilate dioxygenase reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2514\tantC\t\tGO:0019439\t\tISS\t\tP\tanthranilate dioxygenase reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2514\tantC\t\tGO:0044248\t\tISS\t\tP\tanthranilate dioxygenase reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2515\txylL\t\tGO:0015976\t\tISS\t\tP\tcis-1,2-dihydroxycyclohexa-3,4-diene carboxylate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2515\txylL\t\tGO:0019439\t\tISS\t\tP\tcis-1,2-dihydroxycyclohexa-3,4-diene carboxylate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2515\txylL\t\tGO:0044248\t\tISS\t\tP\tcis-1,2-dihydroxycyclohexa-3,4-diene carboxylate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2516\txylZ\t\tGO:0015976\t\tISS\t\tP\ttoluate 1,2-dioxygenase electron transfer component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2517\txylY\t\tGO:0015976\t\tISS\t\tP\ttoluate 1,2-dioxygenase beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2517\txylY\t\tGO:0019439\t\tISS\t\tP\ttoluate 1,2-dioxygenase beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2517\txylY\t\tGO:0044248\t\tISS\t\tP\ttoluate 1,2-dioxygenase beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2518\txylX\t\tGO:0015976\t\tISS\t\tP\ttoluate 1,2-dioxygenase alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2518\txylX\t\tGO:0044248\t\tISS\t\tP\ttoluate 1,2-dioxygenase alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2519\txylS\t\tGO:0006355\t\tISS\t\tP\ttranscriptional regulator XylS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2520\tczcA\t\tGO:0006810\t\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) divalent metal cation efflux transporter CzcA\tRND divalent metal cation efflux transporter CzcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2520\tczcA\t\tGO:0016020\t\tISS\t\tC\tResistance-Nodulation-Cell Division (RND) divalent metal cation efflux transporter CzcA\tRND divalent metal cation efflux transporter CzcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2521\tczcB\t\tGO:0006810\t\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) divalent metal cation efflux membrane fusion protein CzcB precursor\tRND divalent metal cation efflux membrane fusion protein CzcB precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2521\tczcB\t\tGO:0016020\t\tISS\t\tC\tResistance-Nodulation-Cell Division (RND) divalent metal cation efflux membrane fusion protein CzcB precursor\tRND divalent metal cation efflux membrane fusion protein CzcB precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2522\tczcC\t\tGO:0006810\t\tISS\t\tP\touter membrane protein precursor CzcC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2522\tczcC\t\tGO:0016020\t\tISS\t\tC\touter membrane protein precursor CzcC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2532\ttpx\t\tGO:0050896\t\tISS\t\tP\tthiol peroxidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2545\txthA\t\tGO:0006259\t\tISS\t\tP\texodeoxyribonuclease III\texonuclease III\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2570\tlecA\t\tGO:0050896\t\tIDA\t\tP\tLecA\tpa1L|PA-I galactophilic lectin|lecA (changed from pa1L)|LecA (changed from PA-I galactophilic lectin)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2574\talkB1\t\tGO:0015976\t\tISS\t\tP\talkane-1-monooxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2574\talkB1\t\tGO:0044248\t\tISS\t\tP\talkane-1-monooxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2584\tpgsA\t\tGO:0044255\t\tISS\t\tP\tCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase\tphosphatidylglycerophosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2585\tuvrC\t\tGO:0006259\t\tISS\t\tP\texcinuclease ABC subunit C\tUvrABC endonuclease subunit C|UvrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2587\tpqsH\t\tGO:0009372\t\tIDA\t\tP\tprobable FAD-dependent monooxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2587\tpqsH\t\tGO:0019439\t\tIDA\t\tP\tprobable FAD-dependent monooxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2587\tpqsH\t\tGO:0051188\t\tIDA\t\tP\tprobable FAD-dependent monooxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2590\tPA2590\t\tGO:0022857\t\t\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2611\tcysG\t\tGO:0051188\t\tISS\t\tP\tsiroheme synthase\turoporphyrinogen III methylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2612\tserS\t\tGO:0044267\t\tISS\t\tP\tseryl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2614\tlolA\t\tGO:0006457\t\tISS\t\tP\tlipoprotein localization protein LolA\tlipoprotein localization protein LolA|periplasmic chaperone LolA|lolA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2615\tftsK\t\tGO:0043093\t\tISS\t\tP\tcell division protein FtsK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2616\ttrxB1\t\tGO:0004356\t\tIDA\t\tF\tthioredoxin reductase 1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2616\ttrxB1\t\tGO:0006220\t\tISS\t\tP\tthioredoxin reductase 1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2616\ttrxB1\t\tGO:0009117\t\tISS\t\tP\tthioredoxin reductase 1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2617\taat\t\tGO:0008137\t\tISS\t\tF\tleucyl/phenylalanyl-tRNA-protein transferase\tleucyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2617\taat\t\tGO:0044267\t\tISS\t\tP\tleucyl/phenylalanyl-tRNA-protein transferase\tleucyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2619\tinfA\t\tGO:0044267\t\tISS\t\tP\tinitiation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2620\tclpA\t\tGO:0044267\t\tISS\t\tP\tATP-binding protease component ClpA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2622\tcspD\t\tGO:0006355\t\tISS\t\tP\tcold-shock protein CspD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2622\tcspD\t\tGO:0050896\t\tISS\t\tP\tcold-shock protein CspD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2624\tidh\t\tGO:0004318\t\tIDA\t\tF\tisocitrate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2624\tidh\t\tGO:0006091\t\tISS\t\tP\tisocitrate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2626\ttrmU\t\tGO:0016070\t\tISS\t\tP\ttRNA methyltransferase\tasuE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2629\tpurB\t\tGO:0006520\t\tISS\t\tP\tadenylosuccinate lyase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2629\tpurB\t\tGO:0009117\t\tISS\t\tP\tadenylosuccinate lyase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2637\tnuoA\t\tGO:0004075\t\tIDA\t\tF\tNADH dehydrogenase I chain A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2637\tnuoA\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2637\tnuoA\t\tGO:0006119\t\tISS\t\tP\tNADH dehydrogenase I chain A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2638\tnuoB\t\tGO:0004088\t\tIDA\t\tF\tNADH dehydrogenase I chain B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2638\tnuoB\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2638\tnuoB\t\tGO:0006119\t\tISS\t\tP\tNADH dehydrogenase I chain B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2639\tnuoD\t\tGO:0003989\t\tIDA\t\tF\tNADH dehydrogenase I chain C,D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2639\tnuoD\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain C,D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2639\tnuoD\t\tGO:0006119\t\tISS\t\tP\tNADH dehydrogenase I chain C,D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2640\tnuoE\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain E\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2640\tnuoE\t\tGO:0006119\t\tISS\t\tP\tNADH dehydrogenase I chain E\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2640\tnuoE\t\tGO:0016616\t\tISS\t\tF\tNADH dehydrogenase I chain E\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2641\tnuoF\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain F\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2642\tnuoG\t\tGO:0004022\t\tISS\t\tF\tNADH dehydrogenase I chain G\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2642\tnuoG\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain G\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2642\tnuoG\t\tGO:0006119\t\tISS\t\tP\tNADH dehydrogenase I chain G\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2643\tnuoH\t\tGO:0004022\t\tISS\t\tF\tNADH dehydrogenase I chain H\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2643\tnuoH\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain H\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2643\tnuoH\t\tGO:0006119\t\tISS\t\tP\tNADH dehydrogenase I chain H\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2644\tnuoI\t\tGO:0006091\t\tISS\t\tP\tNADH Dehydrogenase I chain I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2644\tnuoI\t\tGO:0006119\t\tISS\t\tP\tNADH Dehydrogenase I chain I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2644\tnuoI\t\tGO:0008831\t\tISS\t\tF\tNADH Dehydrogenase I chain I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2645\tnuoJ\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain J\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2645\tnuoJ\t\tGO:0006119\t\tISS\t\tP\tNADH dehydrogenase I chain J\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2645\tnuoJ\t\tGO:0008762\t\tISS\t\tF\tNADH dehydrogenase I chain J\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2646\tnuoK\t\tGO:0004854\t\tISS\t\tF\tNADH dehydrogenase I chain K\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2646\tnuoK\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain K\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2646\tnuoK\t\tGO:0006119\t\tISS\t\tP\tNADH dehydrogenase I chain K\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2647\tnuoL\t\tGO:0003938\t\tISS\t\tF\tNADH dehydrogenase I chain L\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2647\tnuoL\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain L\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2647\tnuoL\t\tGO:0006119\t\tISS\t\tP\tNADH dehydrogenase I chain L\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2648\tnuoM\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain M\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2649\tnuoN\t\tGO:0004764\t\tISS\t\tF\tNADH dehydrogenase I chain N\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2649\tnuoN\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase I chain N\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2654\tPA2654\t\tGO:0006935\t\tIMP\t\tP\tprobable chemotaxis transducer\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2654\tPA2654\t\tGO:0009723\t\tIMP\t\tP\tprobable chemotaxis transducer\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2664\tfhp\t\tGO:0006091\t\tISS\t\tP\tflavohemoprotein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2687\tpfeS\t\tGO:0004516\t\tISS\t\tF\ttwo-component sensor PfeS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2688\tpfeA\t\tGO:0006810\t\tIDA\t\tP\tFerric enterobactin receptor, outer membrane protein PfeA precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2688\tpfeA\t\tGO:0016020\t\tIDA\t\tC\tFerric enterobactin receptor, outer membrane protein PfeA precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2709\tcysK\t\tGO:0006520\t\tISS\t\tP\tcysteine synthase A\tO-acetylserine sulfhydrolase A\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2717\tcpo\t\tGO:0008152\t\tISS\t\tP\tchloroperoxidase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2738\thimA\t\tGO:0016070\t\tIDA\t\tP\tintegration host factor, alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2739\tpheT\t\tGO:0004817\t\tISS\t\tF\tphenylalanyl-tRNA synthetase, beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2739\tpheT\t\tGO:0006259\t\tIDA\t\tP\tphenylalanyl-tRNA synthetase, beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2739\tpheT\t\tGO:0044267\t\tISS\t\tP\tphenylalanyl-tRNA synthetase, beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2740\tpheS\t\tGO:0000162\t\tISS\t\tP\tphenylalanyl-tRNA synthetase, alpha-subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2740\tpheS\t\tGO:0004818\t\tISS\t\tF\tphenylalanyl-tRNA synthetase, alpha-subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2740\tpheS\t\tGO:0006571\t\tISS\t\tP\tphenylalanyl-tRNA synthetase, alpha-subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2740\tpheS\t\tGO:0009094\t\tISS\t\tP\tphenylalanyl-tRNA synthetase, alpha-subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2740\tpheS\t\tGO:0043039\t\tISS\t\tP\tphenylalanyl-tRNA synthetase, alpha-subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2740\tpheS\t\tGO:0044267\t\tISS\t\tP\tphenylalanyl-tRNA synthetase, alpha-subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2741\trplT\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L20\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2742\trpmI\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L35\tRibosomal protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2743\tinfC\t\tGO:0044267\t\tISS\t\tP\ttranslation initiation factor IF-3\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2744\tthrS\t\tGO:0004830\t\tISS\t\tF\tthreonyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2744\tthrS\t\tGO:0006520\t\tISS\t\tP\tthreonyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2744\tthrS\t\tGO:0006544\t\tISS\t\tP\tthreonyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2744\tthrS\t\tGO:0006563\t\tISS\t\tP\tthreonyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2744\tthrS\t\tGO:0006566\t\tISS\t\tP\tthreonyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2744\tthrS\t\tGO:0043039\t\tISS\t\tP\tthreonyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2744\tthrS\t\tGO:0044267\t\tISS\t\tP\tthreonyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2749\tendA\t\tGO:0006259\t\tISS\t\tP\tDNA-specific endonuclease I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2755\teco\t\tGO:0044267\t\tISS\t\tP\tecotin precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2755\teco\t\tGO:0004867\tPMID:2007606\tISS\tUniProtKB: P23827\tF\tecotin precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid symbol",
                "message": "Problem parsing with/from",
                "obj": "UniProtKB: P23827",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2776\tpauB3\t\tGO:0006598\t\tIDA\t\tP\tFAD-dependent oxidoreductase\tordL|FAD-dependent oxidoreductase|pauB3\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2787\tcpg2\t\tGO:0008152\t\tISS\t\tP\tcarboxypeptidase G2 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2796\ttal\t\tGO:0006091\t\tISS\t\tP\ttransaldolase\tdihydroxyacetone transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2808\tptrA\t\tGO:0042597\t\tIDA\t\tC\tPseudomonas type III repressor A\tptrA| New product name: repressor, PtrA|Pseudomonas type III repressor A\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2830\thtpX\t\tGO:0050896\t\tISS\t\tP\theat shock protein HtpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2832\ttpm\t\tGO:0008802\t\tISS\t\tF\tthiopurine methyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2832\ttpm\t\tGO:0009117\t\tISS\t\tP\tthiopurine methyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2832\ttpm\t\tGO:0050896\t\tISS\t\tP\tthiopurine methyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2850\tohr\t\tGO:0050896\t\tISS\t\tP\torganic hydroperoxide resistance protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2851\tefp\t\tGO:0044267\t\tISS\t\tP\ttranslation elongation factor P\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2856\ttesA\t\tGO:0044255\t\tISS\t\tP\tlysophospholipase A\tapeA|lecithinase B|lysophospholipase L1|lysophospholipase A|TesA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2859\tgreB\t\tGO:0016070\t\tISS\t\tP\ttranscription elongation factor GreB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2861\tligT\t\tGO:0016070\t\tISS\t\tP\t2'-5' RNA ligase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2862\tlipA\t\tGO:0015976\t\tIDA\t\tP\tlactonizing lipase precursor\ttriacylglycerol lipase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2862\tlipA\t\tGO:0044248\t\tIDA\t\tP\tlactonizing lipase precursor\ttriacylglycerol lipase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2863\tlipH\t\tGO:0046903\t\tISS\t\tP\tlipase modulator protein\tlif\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2866\tmttC\t\tGO:0046903\t\tISS\t\tP\tsecretion protein MttC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2873\ttgpA\t\tGO:0003810\t\tIDA\t\tF\ttransglutaminase protein A, TgpA\ttgpA|transglutaminase protein A, TgpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2876\tpyrF\t\tGO:0009117\t\tIDA\t\tP\torotidine 5'-phosphate decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2903\tcobJ\t\tGO:0051188\t\tISS\t\tP\tprecorrin-3 methylase CobJ\tcbiH\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2904\tcobI\t\tGO:0004324\t\tISS\t\tF\tprecorrin-2 methyltransferase CobI\tcbiL\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2904\tcobI\t\tGO:0051188\t\tISS\t\tP\tprecorrin-2 methyltransferase CobI\tcbiL\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2905\tcobH\t\tGO:0051188\t\tISS\t\tP\tprecorrin isomerase CobH\tcbiC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2907\tcobL\t\tGO:0051188\t\tISS\t\tP\tprecorrin-6y-dependent methyltransferase CobL\tcbiT|cbiE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2908\tcbiD\t\tGO:0051188\t\tISS\t\tP\tcobalamin biosynthetic protein CbiD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2923\thisJ\t\tGO:0006520\t\tISS\t\tP\tperiplasmic histidine-binding protein HisJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2923\thisJ\t\tGO:0006810\t\tISS\t\tP\tperiplasmic histidine-binding protein HisJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2924\thisQ\t\tGO:0006520\t\tISS\t\tP\thistidine transport system permease HisQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2925\thisM\t\tGO:0006520\t\tISS\t\tP\thistidine transport system permease HisM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2925\thisM\t\tGO:0006810\t\tISS\t\tP\thistidine transport system permease HisM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2925\thisM\t\tGO:0016020\t\tISS\t\tC\thistidine transport system permease HisM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2932\tmorB\t\tGO:0015976\t\tISS\t\tP\tmorphinone reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2932\tmorB\t\tGO:0044248\t\tISS\t\tP\tmorphinone reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2943\tPA2943\t\tGO:0000162\t\tISS\t\tP\tphospho-2-dehydro-3-deoxyheptonate aldolase\t3-deoxy-d-arabinoheptulosonate-7-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2943\tPA2943\t\tGO:0006520\t\tISS\t\tP\tphospho-2-dehydro-3-deoxyheptonate aldolase\t3-deoxy-d-arabinoheptulosonate-7-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2943\tPA2943\t\tGO:0006571\t\tISS\t\tP\tphospho-2-dehydro-3-deoxyheptonate aldolase\t3-deoxy-d-arabinoheptulosonate-7-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2943\tPA2943\t\tGO:0009094\t\tISS\t\tP\tphospho-2-dehydro-3-deoxyheptonate aldolase\t3-deoxy-d-arabinoheptulosonate-7-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2943\tPA2943\t\tGO:0016818\t\tISS\t\tF\tphospho-2-dehydro-3-deoxyheptonate aldolase\t3-deoxy-d-arabinoheptulosonate-7-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2944\tcobN\t\tGO:0051188\t\tISS\t\tP\tcobalamin biosynthetic protein CobN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2948\tcobM\t\tGO:0051188\t\tISS\t\tP\tprecorrin-3 methylase\tcbiF\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2951\tetfA\t\tGO:0006091\t\tISS\t\tP\telectron transfer flavoprotein alpha-subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2952\tetfB\t\tGO:0006091\t\tISS\t\tP\telectron transfer flavoprotein beta-subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2953\tPA2953\t\tGO:0006091\t\tISS\t\tP\telectron transfer flavoprotein-ubiquinone oxidoreductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2960\tpilZ\t\tGO:0006928\t\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2960\tpilZ\t\tGO:0009297\t\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2961\tholB\t\tGO:0006259\t\tISS\t\tP\tDNA polymerase III, delta prime subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2962\ttmk\t\tGO:0008834\t\tISS\t\tF\tthymidylate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2962\ttmk\t\tGO:0009117\t\tISS\t\tP\tthymidylate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2964\tpabC\t\tGO:0051188\t\tISS\t\tP\t4-amino-4-deoxychorismate lyase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2965\tfabF1\t\tGO:0044255\t\tISS\t\tP\tbeta-ketoacyl-acyl carrier protein synthase II\tFabF protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2966\tacpP\t\tGO:0044255\t\tIDA\t\tP\tacyl carrier protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2967\tfabG\t\tGO:0044255\t\tISS\t\tP\t3-oxoacyl-[acyl-carrier-protein] reductase\tFabG protein|beta-ketoacyl acyl carrier protein reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2968\tfabD\t\tGO:0044255\t\tIDA\t\tP\tmalonyl-CoA-[acyl-carrier-protein] transacylase\tFabD protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2969\tplsX\t\tGO:0044255\t\tISS\t\tP\tfatty acid biosynthesis protein PlsX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2970\trpmF\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L32\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2975\trluC\t\tGO:0016070\t\tISS\t\tP\tribosomal large subunit pseudouridine synthase C\tyceC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2976\trne\t\tGO:0016070\t\tISS\t\tP\tribonuclease E\tams\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2977\tmurB\t\tGO:0004096\t\tIDA\t\tF\tUDP-N-acetylpyruvoylglucosamine reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2977\tmurB\t\tGO:0006040\t\tISS\t\tP\tUDP-N-acetylpyruvoylglucosamine reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2977\tmurB\t\tGO:0009276\t\tISS\t\tC\tUDP-N-acetylpyruvoylglucosamine reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2978\tptpA\t\tGO:0009276\t\tISS\t\tC\tphosphotyrosine protein phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2978\tptpA\t\tGO:0044267\t\tISS\t\tP\tphosphotyrosine protein phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2978\tptpA\t\tGO:0050896\t\tISS\t\tP\tphosphotyrosine protein phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2979\tkdsB\t\tGO:0003867\t\tISS\t\tF\t3-deoxy-manno-octulosonate cytidylyltransferase\tCMP-KDO synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2979\tkdsB\t\tGO:0006000\t\tISS\t\tP\t3-deoxy-manno-octulosonate cytidylyltransferase\tCMP-KDO synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2979\tkdsB\t\tGO:0006013\t\tISS\t\tP\t3-deoxy-manno-octulosonate cytidylyltransferase\tCMP-KDO synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2979\tkdsB\t\tGO:0009276\t\tISS\t\tC\t3-deoxy-manno-octulosonate cytidylyltransferase\tCMP-KDO synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2981\tlpxK\t\tGO:0009103\t\tISS\t\tP\ttetraacyldisaccharide 4*-kinase\tlipid a 4*-kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2981\tlpxK\t\tGO:0009276\t\tISS\t\tC\ttetraacyldisaccharide 4*-kinase\tlipid a 4*-kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2991\tsth\t\tGO:0009117\t\tISS\t\tP\tsoluble pyridine nucleotide transhydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2994\tnqrF\t\tGO:0006091\t\tISS\t\tP\tNa+-translocating NADH:quinone oxidoreductase, subunit Nqr6\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2996\tnqrD\t\tGO:0006091\t\tISS\t\tP\tNa+-translocating NADH:uniquinone oxidoreductase subunit Nqr4\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2997\tnqrC\t\tGO:0006091\t\tISS\t\tP\tNa+-translocating NADH:ubiquinone oxidoreductase subunit Nrq3\tNa+-translocating NADH:ubiquinone oxidoreductase gamma subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2998\tnqrB\t\tGO:0006091\t\tISS\t\tP\tNa+-translocating NADH:ubiquinone oxidoreductase subunit Nrq2\tNa+-translocating NADH:ubiquinone oxidoreductase beta subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2999\tnqrA\t\tGO:0006091\t\tISS\t\tP\tNa+-translocating NADH:ubiquinone oxidoreductase subunit Nrq1\tNa+-translocating NADH:ubiquinone oxidoreductase alpha subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3002\tmfd\t\tGO:0006259\t\tISS\t\tP\ttranscription-repair coupling protein Mfd\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3005\tnagZ\t\tGO:0003824\t\tISS\t\tF\tbeta-N-acetyl-D-glucosaminidase\tycfO\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3007\tlexA\t\tGO:0044267\t\tIDA\t\tP\trepressor protein LexA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3007\tlexA\t\tGO:0050896\t\tIDA\t\tP\trepressor protein LexA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3011\ttopA\t\tGO:0006259\t\tISS\t\tP\tDNA topoisomerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3013\tfaoB\t\tGO:0004791\t\tISS\t\tF\tfatty-acid oxidation complex beta-subunit\tfadA|fadA5|3-ketoacyl-coA thiolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3013\tfaoB\t\tGO:0006520\t\tISS\t\tP\tfatty-acid oxidation complex beta-subunit\tfadA|fadA5|3-ketoacyl-coA thiolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3013\tfaoB\t\tGO:0006550\t\tISS\t\tP\tfatty-acid oxidation complex beta-subunit\tfadA|fadA5|3-ketoacyl-coA thiolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3013\tfaoB\t\tGO:0006552\t\tISS\t\tP\tfatty-acid oxidation complex beta-subunit\tfadA|fadA5|3-ketoacyl-coA thiolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3013\tfaoB\t\tGO:0006558\t\tISS\t\tP\tfatty-acid oxidation complex beta-subunit\tfadA|fadA5|3-ketoacyl-coA thiolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3013\tfaoB\t\tGO:0006574\t\tISS\t\tP\tfatty-acid oxidation complex beta-subunit\tfadA|fadA5|3-ketoacyl-coA thiolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3013\tfaoB\t\tGO:0006633\t\tISS\t\tP\tfatty-acid oxidation complex beta-subunit\tfadA|fadA5|3-ketoacyl-coA thiolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3013\tfaoB\t\tGO:0044255\t\tISS\t\tP\tfatty-acid oxidation complex beta-subunit\tfadA|fadA5|3-ketoacyl-coA thiolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0006520\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0006550\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0006552\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0006554\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0006568\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0006574\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0006631\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0006633\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0019482\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0019541\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0019605\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0044255\t\tISS\t\tP\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3014\tfaoA\t\tGO:0050695\t\tISS\t\tF\tfatty-acid oxidation complex alpha-subunit\tfadB|fadB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3028\tmoeA2\t\tGO:0051188\t\tISS\t\tP\tmolybdenum cofactor biosynthesis protein A2\tmolybdopterin biosynthetic protein MoeA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3029\tmoaB2\t\tGO:0042559\t\tISS\t\tP\tmolybdopterin biosynthetic protein B2\tmolybdenum cofactor biosynthetic protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3029\tmoaB2\t\tGO:0043545\t\tISS\t\tP\tmolybdopterin biosynthetic protein B2\tmolybdenum cofactor biosynthetic protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3029\tmoaB2\t\tGO:0051188\t\tISS\t\tP\tmolybdopterin biosynthetic protein B2\tmolybdenum cofactor biosynthetic protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3032\tsnr1\t\tGO:0006091\t\tISS\t\tP\tcytochrome c Snr1\tcytochrome c Hsc|snr1|cytochrome c Snr1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3049\trmf\t\tGO:0044267\t\tISS\t\tP\tribosome modulation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3050\tpyrD\t\tGO:0004049\t\tIDA\t\tF\tdihydroorotate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3050\tpyrD\t\tGO:0006220\t\tISS\t\tP\tdihydroorotate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3050\tpyrD\t\tGO:0009117\t\tISS\t\tP\tdihydroorotate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3068\tgdhB\t\tGO:0006520\t\tISS\t\tP\tNAD-dependent glutamate dehydrogenase\tgdhB|NAD-dependent glutamate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3082\tgbt\t\tGO:0003674\t\tIDA\t\tF\tglycine betaine transmethylase\tgbt|glycine betaine transmethylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3082\tgbt\t\tGO:0005575\t\tIDA\t\tC\tglycine betaine transmethylase\tgbt|glycine betaine transmethylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3082\tgbt\t\tGO:0006520\t\tIDA\t\tP\tglycine betaine transmethylase\tgbt|glycine betaine transmethylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3082\tgbt\t\tGO:0006555\t\tIDA\t\tP\tglycine betaine transmethylase\tgbt|glycine betaine transmethylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3082\tgbt\t\tGO:0006577\t\tIDA\t\tP\tglycine betaine transmethylase\tgbt|glycine betaine transmethylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3082\tgbt\t\tGO:0008150\t\tIDA\t\tP\tglycine betaine transmethylase\tgbt|glycine betaine transmethylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3082\tgbt\t\tGO:0008863\t\tISS\t\tF\tglycine betaine transmethylase\tgbt|glycine betaine transmethylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3082\tgbt\t\tGO:0019695\t\tIDA\t\tP\tglycine betaine transmethylase\tgbt|glycine betaine transmethylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3083\tpepN\t\tGO:0044267\t\tISS\t\tP\taminopeptidase N\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3092\tfadH1\t\tGO:0044255\t\tISS\t\tP\t2,4-dienoyl-CoA reductase FadH1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3107\tmetZ\t\tGO:0006520\t\tIDA\t\tP\to-succinylhomoserine sulfhydrylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3108\tpurF\t\tGO:0006163\t\tISS\t\tP\tamidophosphoribosyltransferase\tglutamine phosphoribosylpyrophosphate amidotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3108\tpurF\t\tGO:0006520\t\tISS\t\tP\tamidophosphoribosyltransferase\tglutamine phosphoribosylpyrophosphate amidotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3108\tpurF\t\tGO:0006536\t\tISS\t\tP\tamidophosphoribosyltransferase\tglutamine phosphoribosylpyrophosphate amidotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3108\tpurF\t\tGO:0009117\t\tISS\t\tP\tamidophosphoribosyltransferase\tglutamine phosphoribosylpyrophosphate amidotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3108\tpurF\t\tGO:0050304\t\tISS\t\tF\tamidophosphoribosyltransferase\tglutamine phosphoribosylpyrophosphate amidotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3111\tfolC\t\tGO:0004592\t\tISS\t\tF\tfolylpolyglutamate synthetase\tdihydrofolate synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3111\tfolC\t\tGO:0051188\t\tISS\t\tP\tfolylpolyglutamate synthetase\tdihydrofolate synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3112\taccD\t\tGO:0006090\t\tISS\t\tP\tacetyl-CoA carboxylase beta subunit\tdedB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3112\taccD\t\tGO:0019541\t\tISS\t\tP\tacetyl-CoA carboxylase beta subunit\tdedB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3112\taccD\t\tGO:0044255\t\tISS\t\tP\tacetyl-CoA carboxylase beta subunit\tdedB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3113\ttrpF\t\tGO:0006520\t\tIDA\t\tP\tN-(5'phosphoribosyl)anthranilate (PRA) isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3114\ttruA\t\tGO:0003941\t\tISS\t\tF\ttRNA-pseudouridine synthase I\thisT\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3114\ttruA\t\tGO:0006220\t\tISS\t\tP\ttRNA-pseudouridine synthase I\thisT\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3114\ttruA\t\tGO:0044267\t\tISS\t\tP\ttRNA-pseudouridine synthase I\thisT\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3115\tfimV\t\tGO:0006928\t\tIDA\t\tP\tMotility protein FimV\tfimV|motility protein FimV\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3115\tfimV\t\tGO:0016020\t\tIDA\t\tC\tMotility protein FimV\tfimV|motility protein FimV\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3117\tasd\t\tGO:0006520\t\tISS\t\tP\taspartate semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3117\tasd\t\tGO:0006544\t\tISS\t\tP\taspartate semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3117\tasd\t\tGO:0006563\t\tISS\t\tP\taspartate semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3117\tasd\t\tGO:0006566\t\tISS\t\tP\taspartate semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3117\tasd\t\tGO:0008821\t\tIDA\t\tF\taspartate semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3117\tasd\t\tGO:0009085\t\tISS\t\tP\taspartate semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3118\tleuB\t\tGO:0004657\t\tIDA\t\tF\t3-isopropylmalate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3118\tleuB\t\tGO:0006520\t\tISS\t\tP\t3-isopropylmalate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3118\tleuB\t\tGO:0009097\t\tISS\t\tP\t3-isopropylmalate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3118\tleuB\t\tGO:0009909\t\tISS\t\tP\t3-isopropylmalate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3120\tleuD\t\tGO:0003904\t\tISS\t\tF\t3-isopropylmalate dehydratase small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3120\tleuD\t\tGO:0006520\t\tISS\t\tP\t3-isopropylmalate dehydratase small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3120\tleuD\t\tGO:0009097\t\tISS\t\tP\t3-isopropylmalate dehydratase small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3120\tleuD\t\tGO:0009909\t\tISS\t\tP\t3-isopropylmalate dehydratase small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3121\tleuC\t\tGO:0006520\t\tISS\t\tP\t3-isopropylmalate dehydratase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3121\tleuC\t\tGO:0009097\t\tISS\t\tP\t3-isopropylmalate dehydratase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3121\tleuC\t\tGO:0009909\t\tISS\t\tP\t3-isopropylmalate dehydratase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3121\tleuC\t\tGO:0016835\t\tISS\t\tF\t3-isopropylmalate dehydratase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3126\tibpA\t\tGO:0006457\t\tISS\t\tP\theat-shock protein IbpA\thslT\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3134\tgltX\t\tGO:0004828\t\tISS\t\tF\tglutamyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3134\tgltX\t\tGO:0006536\t\tISS\t\tP\tglutamyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3134\tgltX\t\tGO:0044267\t\tISS\t\tP\tglutamyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3138\tuvrB\t\tGO:0006259\t\tIDA\t\tP\texcinuclease ABC subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3141\twbpM\t\tGO:0003824\t\tIDA\t\tF\tnucleotide sugar epimerase/dehydratase WbpM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3141\twbpM\t\tGO:0009103\t\tIDA\t\tP\tnucleotide sugar epimerase/dehydratase WbpM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3141\twbpM\t\tGO:0009276\t\tIDA\t\tC\tnucleotide sugar epimerase/dehydratase WbpM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3141\twbpM\t\tGO:0016020\t\tIDA\t\tC\tnucleotide sugar epimerase/dehydratase WbpM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3145\twbpL\t\tGO:0009276\t\tIDA\t\tC\tglycosyltransferase WbpL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3145\twbpL\t\tGO:0016020\t\tIDA\t\tC\tglycosyltransferase WbpL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3150\twbpG\t\tGO:0009103\t\tIDA\t\tP\tLPS biosynthesis protein WbpG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3150\twbpG\t\tGO:0009276\t\tIDA\t\tC\tLPS biosynthesis protein WbpG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3151\thisF2\t\tGO:0006520\t\tISS\t\tP\timidazoleglycerol-phosphate synthase, cyclase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3151\thisF2\t\tGO:0006547\t\tISS\t\tP\timidazoleglycerol-phosphate synthase, cyclase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3152\thisH2\t\tGO:0006520\t\tISS\t\tP\tglutamine amidotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3152\thisH2\t\tGO:0006547\t\tISS\t\tP\tglutamine amidotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3160\twzz\t\tGO:0009103\t\tIDA\t\tP\tO-antigen chain length regulator\trol|cld|O-antigen chain length regulator Rol|Wzz|wzz1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3160\twzz\t\tGO:0009276\t\tIDA\t\tC\tO-antigen chain length regulator\trol|cld|O-antigen chain length regulator Rol|Wzz|wzz1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3162\trpsA\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3165\thisC2\t\tGO:0006520\t\tISS\t\tP\thistidinol-phosphate aminotransferase\timidazole acetol-phosphate transaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3166\tpheA\t\tGO:0006520\t\tISS\t\tP\tchorismate mutase\tprephenate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3167\tserC\t\tGO:0006520\t\tISS\t\tP\t3-phosphoserine aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3167\tserC\t\tGO:0051188\t\tISS\t\tP\t3-phosphoserine aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3168\tgyrA\t\tGO:0004347\t\tISS\t\tF\tDNA gyrase subunit A\tDNA topoisomerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3168\tgyrA\t\tGO:0006259\t\tIDA\t\tP\tDNA gyrase subunit A\tDNA topoisomerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3170\tPA3170\t\tGO:0008892\t\t\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3171\tubiG\t\tGO:0006091\t\tISS\t\tP\t3-demethylubiquinone-9 3-methyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3171\tubiG\t\tGO:0018467\t\tISS\t\tF\t3-demethylubiquinone-9 3-methyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3171\tubiG\t\tGO:0051188\t\tISS\t\tP\t3-demethylubiquinone-9 3-methyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3176\tgltS\t\tGO:0006810\t\tISS\t\tP\tglutamate/sodium ion symporter, GltS\tglutamate/sodium ion symporter, GltS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3181\tPA3181\t\tGO:0008152\t\tISS\t\tP\t2-keto-3-deoxy-6-phosphogluconate aldolase\tedaA|KDPG-aldolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3181\tPA3181\t\tGO:0015976\t\tISS\t\tP\t2-keto-3-deoxy-6-phosphogluconate aldolase\tedaA|KDPG-aldolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3181\tPA3181\t\tGO:0044248\t\tISS\t\tP\t2-keto-3-deoxy-6-phosphogluconate aldolase\tedaA|KDPG-aldolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3182\tpgl\t\tGO:0008152\t\tIDA\t\tP\t6-phosphogluconolactonase\tpgl|6-phosphogluconolactonase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3183\tzwf\t\tGO:0006091\t\tIDA\t\tP\tglucose-6-phosphate 1-dehydrogenase\tG6PD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3183\tzwf\t\tGO:0008734\t\tIDA\t\tF\tglucose-6-phosphate 1-dehydrogenase\tG6PD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3183\tzwf\t\tGO:0015976\t\tIDA\t\tP\tglucose-6-phosphate 1-dehydrogenase\tG6PD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3183\tzwf\t\tGO:0044248\t\tIDA\t\tP\tglucose-6-phosphate 1-dehydrogenase\tG6PD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3186\toprB\t\tGO:0006810\t\tIDA\t\tP\tGlucose/carbohydrate outer membrane porin OprB precursor\tD1|carbohydrate-selective porin OprB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3192\tgltR\t\tGO:0015976\t\tIDA\t\tP\ttwo-component response regulator GltR\tTranscriptional regulator GltR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3192\tgltR\t\tGO:0044248\t\tIDA\t\tP\ttwo-component response regulator GltR\tTranscriptional regulator GltR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3193\tglk\t\tGO:0004414\t\tISS\t\tF\tglucokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3193\tglk\t\tGO:0006091\t\tISS\t\tP\tglucokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3193\tglk\t\tGO:0006098\t\tISS\t\tP\tglucokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3193\tglk\t\tGO:0015976\t\tISS\t\tP\tglucokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3193\tglk\t\tGO:0044248\t\tISS\t\tP\tglucokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3194\tedd\t\tGO:0006091\t\tIDA\t\tP\tphosphogluconate dehydratase\t6-phosphogluconate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3194\tedd\t\tGO:0006098\t\tIDA\t\tP\tphosphogluconate dehydratase\t6-phosphogluconate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3194\tedd\t\tGO:0008964\t\tISS\t\tF\tphosphogluconate dehydratase\t6-phosphogluconate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3194\tedd\t\tGO:0015976\t\tIDA\t\tP\tphosphogluconate dehydratase\t6-phosphogluconate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3194\tedd\t\tGO:0044248\t\tIDA\t\tP\tphosphogluconate dehydratase\t6-phosphogluconate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3195\tgapA\t\tGO:0004553\t\tIDA\t\tF\tglyceraldehyde 3-phosphate dehydrogenase\tGAPDH|NAD-dependent glyceraldehyde-3-phosphate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3195\tgapA\t\tGO:0006091\t\tIDA\t\tP\tglyceraldehyde 3-phosphate dehydrogenase\tGAPDH|NAD-dependent glyceraldehyde-3-phosphate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3195\tgapA\t\tGO:0015976\t\tIDA\t\tP\tglyceraldehyde 3-phosphate dehydrogenase\tGAPDH|NAD-dependent glyceraldehyde-3-phosphate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3195\tgapA\t\tGO:0044248\t\tIDA\t\tP\tglyceraldehyde 3-phosphate dehydrogenase\tGAPDH|NAD-dependent glyceraldehyde-3-phosphate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3221\tcsaA\t\tGO:0006457\t\tISS\t\tP\tCsaA protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3221\tcsaA\t\tGO:0046903\t\tISS\t\tP\tCsaA protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3223\tazoR3\t\tGO:0044255\t\t\t\tP\tAzoR3, azoreductase 3\tazoR3|AzoR3, azoreductase 3\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3227\tppiA\t\tGO:0006457\t\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase A\tcypH|Rotamase A, PPIase A|Cyclophilin A\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3243\tminC\t\tGO:0043093\t\tISS\t\tP\tcell division inhibitor MinC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3244\tminD\t\tGO:0043093\t\tISS\t\tP\tcell division inhibitor MinD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3245\tminE\t\tGO:0043093\t\tISS\t\tP\tcell division topological specificity factor MinE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3246\trluA\t\tGO:0016070\t\tISS\t\tP\tpseudouridine synthase RluA\tyabO\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3257\talgO\t\tGO:0044267\t\tISS\t\tP\tAlgO\ttsp|algO|prc|AlgO|periplasmic tail-specific protease\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3266\tcapB\t\tGO:0006355\t\tISS\t\tP\tcold acclimation protein B\tcspA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3266\tcapB\t\tGO:0050896\t\tISS\t\tP\tcold acclimation protein B\tcspA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3279\toprP\t\tGO:0006810\t\tIDA\t\tP\tPhosphate-specific outer membrane porin OprP precursor\tporin P\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3280\toprO\t\tGO:0006810\t\tIDA\t\tP\tPyrophosphate-specific outer membrane porin OprO precursor\tporin O\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3296\tphoA\t\tGO:0008152\t\tISS\t\tP\talkaline phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3299\tfadD1\t\tGO:0004824\t\tISS\t\tF\tlong-chain-fatty-acid--CoA ligase\tacyl coenzyme A synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3300\tfadD2\t\tGO:0004813\t\tISS\t\tF\tlong-chain-fatty-acid--CoA ligase\tacyl coenzyme A synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3300\tfadD2\t\tGO:0006631\t\tISS\t\tP\tlong-chain-fatty-acid--CoA ligase\tacyl coenzyme A synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3300\tfadD2\t\tGO:0044255\t\tISS\t\tP\tlong-chain-fatty-acid--CoA ligase\tacyl coenzyme A synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3308\thepA\t\tGO:0016070\t\tISS\t\tP\tRNA helicase HepA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3311\tnbdA\t\tGO:0009975\t\t\t\tF\tNbdA\tNbdA|nbdA|NO-induced biofilm dispersion locus A\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3331\tPA3331\t\tGO:0015976\t\tISS\t\tP\tcytochrome P450\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3331\tPA3331\t\tGO:0044248\t\tISS\t\tP\tcytochrome P450\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3331\tPA3331\t\tGO:0050896\t\tISS\t\tP\tcytochrome P450\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3333\tfabH2\t\tGO:0008137\t\tISS\t\tF\t3-oxoacyl-[acyl-carrier-protein] synthase III\tacetyl CoA ACP transacetylase|beta-ketoacyl-ACP synthase III\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3333\tfabH2\t\tGO:0044255\t\tISS\t\tP\t3-oxoacyl-[acyl-carrier-protein] synthase III\tacetyl CoA ACP transacetylase|beta-ketoacyl-ACP synthase III\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3337\trfaD\t\tGO:0004462\t\tISS\t\tF\tADP-L-glycero-D-mannoheptose 6-epimerase\tADP-glyceromanno-heptose 6-epimerase.\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3337\trfaD\t\tGO:0006000\t\tISS\t\tP\tADP-L-glycero-D-mannoheptose 6-epimerase\tADP-glyceromanno-heptose 6-epimerase.\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3337\trfaD\t\tGO:0006013\t\tISS\t\tP\tADP-L-glycero-D-mannoheptose 6-epimerase\tADP-glyceromanno-heptose 6-epimerase.\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3337\trfaD\t\tGO:0009276\t\tISS\t\tC\tADP-L-glycero-D-mannoheptose 6-epimerase\tADP-glyceromanno-heptose 6-epimerase.\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3339\tplpD\t\tGO:0005576\t\tIDA\t\tC\tpatatin-like protein, PlpD\tPlpD| patatin-like protein, PlpD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3339\tplpD\t\tGO:0016298\t\tIDA\t\tF\tpatatin-like protein, PlpD\tPlpD| patatin-like protein, PlpD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3339\tplpD\t\tGO:0046819\t\tIDA\t\tP\tpatatin-like protein, PlpD\tPlpD| patatin-like protein, PlpD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3344\trecQ\t\tGO:0006259\t\tISS\t\tP\tATP-dependent DNA helicase RecQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3356\tpauA5\t\tGO:0006598\t\tIDA\t\tP\tGlutamylpolyamine synthetase\tGlutamylpolyamine synthetase|pauA5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3357\tdsdA\t\tGO:0006520\t\tISS\t\tP\tD-serine dehydratase\tD-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3361\tlecB\t\tGO:0006928\t\tIDA\t\tP\tfucose-binding lectin PA-IIL\tLecB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3363\tamiR\t\tGO:0006355\t\tIDA\t\tP\taliphatic amidase regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3364\tamiC\t\tGO:0006355\t\tIDA\t\tP\taliphatic amidase expression-regulating protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3366\tamiE\t\tGO:0044248\t\tIDA\t\tP\taliphatic amidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3382\tphnE\t\tGO:0016020\t\tISS\t\tC\tphosphonate transport protein PhnE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3383\tPA3383\t\tGO:0006810\t\tISS\t\tP\tbinding protein component of ABC phosphonate transporter\tphnD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3383\tPA3383\t\tGO:0015716\t\tISS\t\tP\tbinding protein component of ABC phosphonate transporter\tphnD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3384\tphnC\t\tGO:0006810\t\tISS\t\tP\tATP-binding component of ABC phosphonate transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3387\trhlG\t\tGO:0009276\t\tIDA\t\tC\tbeta-ketoacyl reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3387\trhlG\t\tGO:0044255\t\tIDA\t\tP\tbeta-ketoacyl reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3391\tnosR\t\tGO:0016020\t\tISS\t\tC\tregulatory protein NosR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3392\tnosZ\t\tGO:0006091\t\tISS\t\tP\tnitrous-oxide reductase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3396\tnosL\t\tGO:0006091\t\tISS\t\tP\tNosL protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3397\tfprA\t\tGO:0004550\t\tIDA\t\tF\tFprA\tNADPH:ferredoxin reductase|NADP+-dependent ferredoxin reductase|FPR|fprA|fpr|FprA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3397\tfprA\t\tGO:0015994\t\tISS\t\tP\tFprA\tNADPH:ferredoxin reductase|NADP+-dependent ferredoxin reductase|FPR|fprA|fpr|FprA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3397\tfprA\t\tGO:0051188\t\tISS\t\tP\tFprA\tNADPH:ferredoxin reductase|NADP+-dependent ferredoxin reductase|FPR|fprA|fpr|FprA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3405\thasE\t\tGO:0046903\t\tISS\t\tP\tmetalloprotease secretion protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3406\thasD\t\tGO:0046903\t\tISS\t\tP\ttransport protein HasD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3407\thasAp\t\tGO:0006810\t\tIDA\t\tP\theme acquisition protein HasAp\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3408\thasR\t\tGO:0006810\t\tISS\t\tP\tHeme uptake outer membrane receptor HasR precursor\tHaem uptake outer membrane receptor HasR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3408\thasR\t\tGO:0022857\t\t\t\tF\tHeme uptake outer membrane receptor HasR precursor\tHaem uptake outer membrane receptor HasR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3418\tldh\t\tGO:0006520\t\tISS\t\tP\tleucine dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3437\tfolM\t\tGO:0071172\t\tIDA\t\tF\tdihydromonapterin reductase, FolM\tydgB|folM|dihydromonapterin reductase, FolM\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3438\tfolE1\t\tGO:0051188\t\tISS\t\tP\tGTP cyclohydrolase I precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3439\tfolX\t\tGO:0051188\t\tISS\t\tP\td-erythro-7,8-dihydroneopterin triphosphate epimerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3452\tmqoA\t\tGO:0008152\t\tISS\t\tP\tmalate:quinone oxidoreductase\tmalate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3475\tpheC\t\tGO:0003855\t\tISS\t\tF\tcyclohexadienyl dehydratase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3475\tpheC\t\tGO:0006520\t\tIDA\t\tP\tcyclohexadienyl dehydratase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3475\tpheC\t\tGO:0050896\t\tIDA\t\tP\tcyclohexadienyl dehydratase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3476\trhlI\t\tGO:0050896\t\tIDA\t\tP\tautoinducer synthesis protein RhlI\tautoinducer synthesis protein RhlI\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3477\trhlR\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator RhlR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3477\trhlR\t\tGO:0050896\t\tIDA\t\tP\ttranscriptional regulator RhlR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3482\tmetG\t\tGO:0003918\t\tISS\t\tF\tmethionyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3482\tmetG\t\tGO:0006520\t\tISS\t\tP\tmethionyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3482\tmetG\t\tGO:0006555\t\tISS\t\tP\tmethionyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3482\tmetG\t\tGO:0043039\t\tISS\t\tP\tmethionyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3482\tmetG\t\tGO:0044267\t\tISS\t\tP\tmethionyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3487\ttle5\t\tGO:0044255\t\tIDA\t\tP\tTle5\tpldA|phospholipase D|Tle5|tle5|PldA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3495\tnth\t\tGO:0006259\t\tISS\t\tP\tendonuclease III\tDNA lyase|deoxyribonuclease\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3524\tgloA1\t\tGO:0008152\t\tISS\t\tP\tlactoylglutathione lyase\tS-D-lactoylglutathione methylglyoxal lyase|ketone-aldehyde mutase|aldoketomutase|glyoxalase I|methylglyoxalase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3525\targG\t\tGO:0003883\t\tISS\t\tF\targininosuccinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3525\targG\t\tGO:0006520\t\tISS\t\tP\targininosuccinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3525\targG\t\tGO:0006522\t\tISS\t\tP\targininosuccinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3525\targG\t\tGO:0006525\t\tISS\t\tP\targininosuccinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3525\targG\t\tGO:0006531\t\tISS\t\tP\targininosuccinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3525\targG\t\tGO:0006560\t\tISS\t\tP\targininosuccinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3527\tpyrC\t\tGO:0009117\t\tISS\t\tP\tdihydroorotase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3528\trnt\t\tGO:0006259\t\tISS\t\tP\tribonuclease T\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3531\tbfrB\t\tGO:0006810\t\tISS\t\tP\tbacterioferritin\tcytochrome b-1 (cytochrome b-557)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3531\tbfrB\t\tGO:0050896\t\tISS\t\tP\tbacterioferritin\tcytochrome b-1 (cytochrome b-557)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3537\targF\t\tGO:0004354\t\tISS\t\tF\tornithine carbamoyltransferase, anabolic\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3537\targF\t\tGO:0006520\t\tIDA\t\tP\tornithine carbamoyltransferase, anabolic\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3537\targF\t\tGO:0006525\t\tIDA\t\tP\tornithine carbamoyltransferase, anabolic\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3537\targF\t\tGO:0006560\t\tIDA\t\tP\tornithine carbamoyltransferase, anabolic\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0050896\t\tIDA\t\tP\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0009276\t\t\t\tC\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3541\talg8\t\tGO:0009276\t\tISS\t\tC\talginate biosynthesis protein Alg8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3542\talg44\t\tGO:0050896\t\tIDA\t\tP\talginate biosynthesis protein Alg44\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3543\talgK\t\tGO:0009276\t\tIDA\t\tC\talginate biosynthetic protein AlgK precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3543\talgK\t\tGO:0050896\t\tIDA\t\tP\talginate biosynthetic protein AlgK precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3545\talgG\t\tGO:0009276\t\tISS\t\tC\talginate-c5-mannuronan-epimerase AlgG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3546\talgX\t\tGO:0009276\t\tIDA\t\tC\talginate biosynthesis protein AlgX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3548\talgI\t\tGO:0009276\t\tIDA\t\tC\talginate o-acetyltransferase AlgI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3548\talgI\t\tGO:0042121\t\tIDA\t\tP\talginate o-acetyltransferase AlgI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3548\talgI\t\tGO:0050896\t\tIDA\t\tP\talginate o-acetyltransferase AlgI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3549\talgJ\t\tGO:0009276\t\tIDA\t\tC\talginate o-acetyltransferase AlgJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3550\talgF\t\tGO:0009276\t\tIDA\t\tC\talginate o-acetyltransferase AlgF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3551\talgA\t\tGO:0006000\t\tIDA\t\tP\tphosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase\tAlginate biosynthesis protein AlgA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3551\talgA\t\tGO:0006013\t\tIDA\t\tP\tphosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase\tAlginate biosynthesis protein AlgA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3551\talgA\t\tGO:0009276\t\tIDA\t\tC\tphosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase\tAlginate biosynthesis protein AlgA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3551\talgA\t\tGO:0050896\t\tIDA\t\tP\tphosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase\tAlginate biosynthesis protein AlgA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3560\tfruA\t\tGO:0004645\t\tISS\t\tF\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3560\tfruA\t\tGO:0006000\t\tISS\t\tP\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3560\tfruA\t\tGO:0006013\t\tISS\t\tP\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3560\tfruA\t\tGO:0006810\t\tISS\t\tP\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3560\tfruA\t\tGO:0015976\t\tISS\t\tP\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3560\tfruA\t\tGO:0044248\t\tISS\t\tP\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3561\tfruK\t\tGO:0006000\t\tISS\t\tP\t1-phosphofructokinase\tfructose-1-phosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3561\tfruK\t\tGO:0006012\t\tISS\t\tP\t1-phosphofructokinase\tfructose-1-phosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3561\tfruK\t\tGO:0006013\t\tISS\t\tP\t1-phosphofructokinase\tfructose-1-phosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3561\tfruK\t\tGO:0006810\t\tISS\t\tP\t1-phosphofructokinase\tfructose-1-phosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3561\tfruK\t\tGO:0008152\t\tISS\t\tP\t1-phosphofructokinase\tfructose-1-phosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3561\tfruK\t\tGO:0008914\t\tISS\t\tF\t1-phosphofructokinase\tfructose-1-phosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3569\tmmsB\t\tGO:0004365\t\tIDA\t\tF\t3-hydroxyisobutyrate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3569\tmmsB\t\tGO:0006550\t\tIDA\t\tP\t3-hydroxyisobutyrate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3569\tmmsB\t\tGO:0006552\t\tIDA\t\tP\t3-hydroxyisobutyrate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3569\tmmsB\t\tGO:0015976\t\tIDA\t\tP\t3-hydroxyisobutyrate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3569\tmmsB\t\tGO:0044248\t\tIDA\t\tP\t3-hydroxyisobutyrate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3570\tmmsA\t\tGO:0004040\t\tIDA\t\tF\tmethylmalonate-semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3570\tmmsA\t\tGO:0006520\t\tIDA\t\tP\tmethylmalonate-semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3570\tmmsA\t\tGO:0006550\t\tIDA\t\tP\tmethylmalonate-semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3570\tmmsA\t\tGO:0006552\t\tIDA\t\tP\tmethylmalonate-semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3570\tmmsA\t\tGO:0015976\t\tIDA\t\tP\tmethylmalonate-semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3570\tmmsA\t\tGO:0019541\t\tIDA\t\tP\tmethylmalonate-semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3570\tmmsA\t\tGO:0044248\t\tIDA\t\tP\tmethylmalonate-semialdehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3571\tmmsR\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator MmsR\tMmsAB operon regulatory protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3581\tglpF\t\tGO:0006810\t\tIDA\t\tP\tglycerol uptake facilitator protein\tGlycerol diffusion facilitator\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3582\tglpK\t\tGO:0004315\t\tISS\t\tF\tglycerol kinase\tGlycerokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3582\tglpK\t\tGO:0008152\t\tIDA\t\tP\tglycerol kinase\tGlycerokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3582\tglpK\t\tGO:0046486\t\tIDA\t\tP\tglycerol kinase\tGlycerokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3583\tglpR\t\tGO:0006355\t\tIDA\t\tP\tglycerol-3-phosphate regulon repressor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3584\tglpD\t\tGO:0006091\t\tIDA\t\tP\tglycerol-3-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3584\tglpD\t\tGO:0008152\t\tIDA\t\tP\tglycerol-3-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3584\tglpD\t\tGO:0046486\t\tIDA\t\tP\tglycerol-3-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3584\tglpD\t\tGO:0047150\t\tIDA\t\tF\tglycerol-3-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3585\tglpM\t\tGO:0006810\t\tIDA\t\tP\tmembrane protein GlpM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3585\tglpM\t\tGO:0016020\t\tIDA\t\tC\tmembrane protein GlpM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3603\tdgkA\t\tGO:0004042\t\tISS\t\tF\tdiacylglycerol kinase\tdiglyceride kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3603\tdgkA\t\tGO:0044255\t\tISS\t\tP\tdiacylglycerol kinase\tdiglyceride kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3603\tdgkA\t\tGO:0046486\t\tISS\t\tP\tdiacylglycerol kinase\tdiglyceride kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3607\tpotA\t\tGO:0006810\t\tISS\t\tP\tpolyamine transport protein PotA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3608\tpotB\t\tGO:0006810\t\tISS\t\tP\tpolyamine transport protein PotB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3608\tpotB\t\tGO:0016020\t\tISS\t\tC\tpolyamine transport protein PotB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3609\tpotC\t\tGO:0006810\t\tISS\t\tP\tpolyamine transport protein PotC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3609\tpotC\t\tGO:0016020\t\tISS\t\tC\tpolyamine transport protein PotC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3610\tpotD\t\tGO:0006810\t\tISS\t\tP\tpolyamine transport protein PotD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3617\trecA\t\tGO:0006259\t\tIDA\t\tP\tRecA protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3620\tmutS\t\tGO:0006259\t\tISS\t\tP\tDNA mismatch repair protein MutS\tfdv\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3621\tfdxA\t\tGO:0006091\t\tISS\t\tP\tferredoxin I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3624\tpcm\t\tGO:0050896\t\tISS\t\tP\tL-isoaspartate protein carboxylmethyltransferase type II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3625\tsurE\t\tGO:0050896\t\tISS\t\tP\tsurvival protein SurE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3627\tygbB\t\tGO:0051188\t\tISS\t\tP\t2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase\tYgbB protein|ygbB|2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3629\tadhC\t\tGO:0008152\t\tISS\t\tP\talcohol dehydrogenase class III\tglutathione-dependent formaldehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3633\tygbP\t\tGO:0051188\t\tISS\t\tP\t4-diphosphocytidyl-2-C-methylerythritol synthase\tYgbP protein|ygbP|4-diphosphocytidyl-2-C-methylerythritol synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3636\tkdsA\t\tGO:0044248\t\tIDA\t\tP\t2-dehydro-3-deoxyphosphooctonate aldolase\t3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase|Kdo-8-P synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3639\taccA\t\tGO:0006090\t\tISS\t\tP\tacetyl-coenzyme A carboxylase carboxyl transferase (alpha subunit)\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3639\taccA\t\tGO:0019541\t\tISS\t\tP\tacetyl-coenzyme A carboxylase carboxyl transferase (alpha subunit)\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3639\taccA\t\tGO:0044255\t\tISS\t\tP\tacetyl-coenzyme A carboxylase carboxyl transferase (alpha subunit)\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3640\tdnaE\t\tGO:0006259\t\tISS\t\tP\tDNA polymerase III, alpha chain\tpolC|DNA nucleotidyltransferase (DNA-directed)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3642\trnhB\t\tGO:0004652\t\tISS\t\tF\tribonuclease HII\tRNAse HII\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3642\trnhB\t\tGO:0006259\t\tISS\t\tP\tribonuclease HII\tRNAse HII\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3643\tlpxB\t\tGO:0009276\t\tISS\t\tC\tlipid A-disaccharide synthase\tpgsB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3644\tlpxA\t\tGO:0009276\t\tISS\t\tC\tUDP-N-acetylglucosamine acyltransferase\tacyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3645\tfabZ\t\tGO:0009276\t\tISS\t\tC\t(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase\tsefA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3646\tlpxD\t\tGO:0009276\t\tISS\t\tC\tUDP-3-O-[3-hydroxylauroyl] glucosamine N-acyltransferase\tomsA|firA|FirA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3650\tdxr\t\tGO:0004412\t\tIDA\t\tF\t1-deoxy-d-xylulose 5-phosphate reductoisomerase\tyaeM\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3650\tdxr\t\tGO:0051188\t\tISS\t\tP\t1-deoxy-d-xylulose 5-phosphate reductoisomerase\tyaeM\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3651\tcdsA\t\tGO:0044255\t\tISS\t\tP\tphosphatidate cytidylyltransferase\tCDP-diglyceride pyrophosphorylase|CDP-diacylglycerol synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3652\tuppS\t\tGO:0008689\t\tISS\t\tF\tundecaprenyl pyrophosphate synthetase\tyaeS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3652\tuppS\t\tGO:0009276\t\tISS\t\tC\tundecaprenyl pyrophosphate synthetase\tyaeS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3652\tuppS\t\tGO:0051188\t\tISS\t\tP\tundecaprenyl pyrophosphate synthetase\tyaeS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3653\tfrr\t\tGO:0044267\t\tIDA\t\tP\tribosome recycling factor\trrf|ribosome releasing factor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3654\tpyrH\t\tGO:0009117\t\tISS\t\tP\turidylate kinase\tsmbA|uridine monophosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3655\ttsf\t\tGO:0044267\t\tISS\t\tP\telongation factor Ts\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3656\trpsB\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3657\tmap\t\tGO:0044267\t\tISS\t\tP\tmethionine aminopeptidase\tMAP|peptidase M\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3658\tglnD\t\tGO:0006520\t\tISS\t\tP\tprotein-PII uridylyltransferase\tnfrX\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3666\tdapD\t\tGO:0009276\t\tISS\t\tC\ttetrahydrodipicolinate succinylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3673\tplsB\t\tGO:0004791\t\tISS\t\tF\tglycerol-3-phosphate acyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3673\tplsB\t\tGO:0044255\t\tISS\t\tP\tglycerol-3-phosphate acyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3686\tadk\t\tGO:0004156\t\tISS\t\tF\tadenylate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3686\tadk\t\tGO:0006163\t\tISS\t\tP\tadenylate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3686\tadk\t\tGO:0009117\t\tISS\t\tP\tadenylate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3687\tppc\t\tGO:0006090\t\tISS\t\tP\tphosphoenolpyruvate carboxylase\tPEPC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3687\tppc\t\tGO:0006091\t\tISS\t\tP\tphosphoenolpyruvate carboxylase\tPEPC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3687\tppc\t\tGO:0008152\t\tISS\t\tP\tphosphoenolpyruvate carboxylase\tPEPC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3687\tppc\t\tGO:0015977\t\tISS\t\tP\tphosphoenolpyruvate carboxylase\tPEPC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3687\tppc\t\tGO:0016814\t\tISS\t\tF\tphosphoenolpyruvate carboxylase\tPEPC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3687\tppc\t\tGO:0019643\t\tISS\t\tP\tphosphoenolpyruvate carboxylase\tPEPC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3700\tlysS\t\tGO:0004821\t\tISS\t\tF\tlysyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3700\tlysS\t\tGO:0006520\t\tISS\t\tP\tlysyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3700\tlysS\t\tGO:0009085\t\tISS\t\tP\tlysyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3700\tlysS\t\tGO:0043039\t\tISS\t\tP\tlysyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3700\tlysS\t\tGO:0044267\t\tISS\t\tP\tlysyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3702\twspR\t\tGO:0009975\t\t\t\tF\tWspR\tWspR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0044267\t\tIDA\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3725\trecJ\t\tGO:0006259\t\tISS\t\tP\tsingle-stranded-DNA-specific exonuclease RecJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3735\tthrC\t\tGO:0004424\t\tISS\t\tF\tthreonine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3735\tthrC\t\tGO:0006520\t\tIDA\t\tP\tthreonine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3735\tthrC\t\tGO:0006544\t\tIDA\t\tP\tthreonine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3735\tthrC\t\tGO:0006563\t\tIDA\t\tP\tthreonine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3735\tthrC\t\tGO:0006566\t\tIDA\t\tP\tthreonine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3735\tthrC\t\tGO:0042816\t\tIDA\t\tP\tthreonine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3735\tthrC\t\tGO:0051188\t\tIDA\t\tP\tthreonine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3738\txerD\t\tGO:0006259\t\tISS\t\tP\tintegrase/recombinase XerD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3742\trplS\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L19\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3743\ttrmD\t\tGO:0016070\t\tISS\t\tP\ttRNA (guanine-N1)-methyltransferase\tTrmD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3744\trimM\t\tGO:0016070\t\tISS\t\tP\t16S rRNA processing protein\tRimM\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3745\trpsP\t\tGO:0006259\t\tISS\t\tP\t30S ribosomal protein S16\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3745\trpsP\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S16\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3751\tpurT\t\tGO:0004361\t\tISS\t\tF\tphosphoribosylglycinamide formyltransferase 2\tglycinamide ribonucleotide transformylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3751\tpurT\t\tGO:0006520\t\tISS\t\tP\tphosphoribosylglycinamide formyltransferase 2\tglycinamide ribonucleotide transformylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3751\tpurT\t\tGO:0006544\t\tISS\t\tP\tphosphoribosylglycinamide formyltransferase 2\tglycinamide ribonucleotide transformylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3751\tpurT\t\tGO:0006563\t\tISS\t\tP\tphosphoribosylglycinamide formyltransferase 2\tglycinamide ribonucleotide transformylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3751\tpurT\t\tGO:0006566\t\tISS\t\tP\tphosphoribosylglycinamide formyltransferase 2\tglycinamide ribonucleotide transformylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3751\tpurT\t\tGO:0009117\t\tISS\t\tP\tphosphoribosylglycinamide formyltransferase 2\tglycinamide ribonucleotide transformylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3763\tpurL\t\tGO:0003952\t\tISS\t\tF\tphosphoribosylformylglycinamidine synthase\tformylglycinamide ribotide amidotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3763\tpurL\t\tGO:0006163\t\tISS\t\tP\tphosphoribosylformylglycinamidine synthase\tformylglycinamide ribotide amidotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3763\tpurL\t\tGO:0009117\t\tISS\t\tP\tphosphoribosylformylglycinamidine synthase\tformylglycinamide ribotide amidotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3769\tguaA\t\tGO:0006520\t\tISS\t\tP\tGMP synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3769\tguaA\t\tGO:0009117\t\tISS\t\tP\tGMP synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3770\tguaB\t\tGO:0006163\t\tISS\t\tP\tinosine-5'-monophosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3770\tguaB\t\tGO:0009117\t\tISS\t\tP\tinosine-5'-monophosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3770\tguaB\t\tGO:0018659\t\tIDA\t\tF\tinosine-5'-monophosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3777\txseA\t\tGO:0006259\t\tISS\t\tP\texodeoxyribonuclease VII large subunit\tExonuclease VII\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3790\toprC\t\tGO:0006810\t\tIDA\t\tP\tPutative copper transport outer membrane porin OprC precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3792\tleuA\t\tGO:0006520\t\tISS\t\tP\t2-isopropylmalate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3792\tleuA\t\tGO:0009097\t\tISS\t\tP\t2-isopropylmalate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3792\tleuA\t\tGO:0009909\t\tISS\t\tP\t2-isopropylmalate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3802\thisS\t\tGO:0004814\t\tISS\t\tF\thistidyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3802\thisS\t\tGO:0044267\t\tISS\t\tP\thistidyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0006928\t\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3807\tndk\t\tGO:0004766\t\tISS\t\tF\tnucleoside diphosphate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3807\tndk\t\tGO:0009117\t\tIDA\t\tP\tnucleoside diphosphate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3809\tfdx2\t\tGO:0006091\t\tISS\t\tP\tferredoxin [2Fe-2S]\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3814\tiscS\t\tGO:0006520\t\tISS\t\tP\tL-cysteine desulfurase (pyridoxal phosphate-dependent)\tIscS protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3814\tiscS\t\tGO:0006534\t\tISS\t\tP\tL-cysteine desulfurase (pyridoxal phosphate-dependent)\tIscS protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3814\tiscS\t\tGO:0006790\t\tISS\t\tP\tL-cysteine desulfurase (pyridoxal phosphate-dependent)\tIscS protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3814\tiscS\t\tGO:0051188\t\tISS\t\tP\tL-cysteine desulfurase (pyridoxal phosphate-dependent)\tIscS protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3816\tcysE\t\tGO:0006520\t\tISS\t\tP\tO-acetylserine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3818\tPA3818\t\tGO:0044267\t\tISS\t\tP\textragenic suppressor protein SuhB\tsuhB|SuhB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3818\tPA3818\t\tGO:0050896\t\tISS\t\tP\textragenic suppressor protein SuhB\tsuhB|SuhB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3821\tsecD\t\tGO:0016020\t\tISS\t\tC\tsecretion protein SecD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3823\ttgt\t\tGO:0016070\t\tISS\t\tP\tqueuine tRNA-ribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3824\tqueA\t\tGO:0044267\t\tISS\t\tP\tS-adenosylmethionine:trna ribosyltransferase-isomerase\tQueuosine biosynthesis protein QueA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3831\tpepA\t\tGO:0044267\t\tISS\t\tP\tleucine aminopeptidase\tcarP|xerB|phpA|Aminopeptidase A\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3832\tholC\t\tGO:0006259\t\tISS\t\tP\tDNA polymerase III, chi subunit\tHolC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3834\tvalS\t\tGO:0006520\t\tISS\t\tP\tvalyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3834\tvalS\t\tGO:0009097\t\tISS\t\tP\tvalyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3834\tvalS\t\tGO:0009098\t\tISS\t\tP\tvalyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3834\tvalS\t\tGO:0009909\t\tISS\t\tP\tvalyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3834\tvalS\t\tGO:0043039\t\tISS\t\tP\tvalyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3834\tvalS\t\tGO:0044267\t\tISS\t\tP\tvalyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3857\tpcs\t\tGO:0044255\t\tISS\t\tP\tphosphatidylcholine synthase\tpcs\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3859\tPA3859\t\tGO:0003824\t\tISS\t\tF\tcarboxylesterase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3861\trhl\t\tGO:0016070\t\tISS\t\tP\tATP-dependent RNA helicase RhlB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3866\tPA3866\t\tGO:0050896\t\tISS\t\tP\tPyocin S4\tPyocin S4\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3870\tmoaA1\t\tGO:0042559\t\tISS\t\tP\tmolybdopterin biosynthetic protein A1\tmolybdenum cofactor biosynthetic protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3870\tmoaA1\t\tGO:0043545\t\tISS\t\tP\tmolybdopterin biosynthetic protein A1\tmolybdenum cofactor biosynthetic protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3870\tmoaA1\t\tGO:0051188\t\tISS\t\tP\tmolybdopterin biosynthetic protein A1\tmolybdenum cofactor biosynthetic protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3872\tnarI\t\tGO:0006091\t\tISS\t\tP\trespiratory nitrate reductase gamma chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3873\tnarJ\t\tGO:0006091\t\tISS\t\tP\trespiratory nitrate reductase delta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3874\tnarH\t\tGO:0004455\t\tISS\t\tF\trespiratory nitrate reductase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3874\tnarH\t\tGO:0006091\t\tISS\t\tP\trespiratory nitrate reductase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3874\tnarH\t\tGO:0006807\t\tISS\t\tP\trespiratory nitrate reductase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3875\tnarG\t\tGO:0004617\t\tISS\t\tF\trespiratory nitrate reductase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3875\tnarG\t\tGO:0006091\t\tISS\t\tP\trespiratory nitrate reductase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3875\tnarG\t\tGO:0006807\t\tISS\t\tP\trespiratory nitrate reductase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3876\tnarK2\t\tGO:0006807\t\tISS\t\tP\tnitrite extrusion protein 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3876\tnarK2\t\tGO:0006810\t\tISS\t\tP\tnitrite extrusion protein 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3876\tnarK2\t\tGO:0016020\t\tISS\t\tC\tnitrite extrusion protein 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3877\tnarK1\t\tGO:0006807\t\tISS\t\tP\tnitrite extrusion protein 1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3877\tnarK1\t\tGO:0006810\t\tISS\t\tP\tnitrite extrusion protein 1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3877\tnarK1\t\tGO:0016020\t\tISS\t\tC\tnitrite extrusion protein 1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3878\tnarX\t\tGO:0000160\t\tISS\t\tP\ttwo-component sensor NarX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3878\tnarX\t\tGO:0006091\t\tISS\t\tP\ttwo-component sensor NarX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3878\tnarX\t\tGO:0006807\t\tISS\t\tP\ttwo-component sensor NarX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3878\tnarX\t\tGO:0008479\t\tISS\t\tF\ttwo-component sensor NarX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3879\tnarL\t\tGO:0000160\t\tISS\t\tP\ttwo-component response regulator NarL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3879\tnarL\t\tGO:0006091\t\tISS\t\tP\ttwo-component response regulator NarL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3879\tnarL\t\tGO:0006807\t\tISS\t\tP\ttwo-component response regulator NarL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3887\tnhaP\t\tGO:0006810\t\tIDA\t\tP\tNa+/H+ antiporter NhaP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3887\tnhaP\t\tGO:0016020\t\tIDA\t\tC\tNa+/H+ antiporter NhaP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3901\tfecA\t\tGO:0006810\t\tISS\t\tP\tFe(III) dicitrate transport protein FecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3901\tfecA\t\tGO:0016020\t\tISS\t\tC\tFe(III) dicitrate transport protein FecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3903\tprfC\t\tGO:0044267\t\tISS\t\tP\tpeptide chain release factor 3\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3915\tmoaB1\t\tGO:0042559\t\tISS\t\tP\tmolybdopterin biosynthetic protein B1\tmolybdenum cofactor biosynthetic protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3915\tmoaB1\t\tGO:0043545\t\tISS\t\tP\tmolybdopterin biosynthetic protein B1\tmolybdenum cofactor biosynthetic protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3915\tmoaB1\t\tGO:0051188\t\tISS\t\tP\tmolybdopterin biosynthetic protein B1\tmolybdenum cofactor biosynthetic protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3916\tmoaE\t\tGO:0051188\t\tISS\t\tP\tmolybdopterin converting factor, large subunit\tmolybdopterin biosynthetic protein E\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3917\tmoaD\t\tGO:0051188\t\tISS\t\tP\tmolybdopterin converting factor, small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3929\tcioB\t\tGO:0006091\t\tIDA\t\tP\tcyanide insensitive terminal oxidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3930\tcioA\t\tGO:0006091\t\tIDA\t\tP\tcyanide insensitive terminal oxidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3935\ttauD\t\tGO:0015976\t\tISS\t\tP\ttaurine dioxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3935\ttauD\t\tGO:0044248\t\tISS\t\tP\ttaurine dioxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3942\ttesB\t\tGO:0044255\t\tISS\t\tP\tacyl-CoA thioesterase II\tTesB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3970\tamn\t\tGO:0003887\t\tISS\t\tF\tAMP nucleosidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3970\tamn\t\tGO:0006163\t\tISS\t\tP\tAMP nucleosidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3970\tamn\t\tGO:0009117\t\tISS\t\tP\tAMP nucleosidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3975\tthiD\t\tGO:0008817\t\tISS\t\tF\tphosphomethylpyrimidine kinase\tHMP-P kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3975\tthiD\t\tGO:0051188\t\tISS\t\tP\tphosphomethylpyrimidine kinase\tHMP-P kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3976\tthiE\t\tGO:0051188\t\tISS\t\tP\tthiamin-phosphate pyrophosphorylase\tthiC|thiamin-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3977\themL\t\tGO:0003755\t\tISS\t\tF\tglutamate-1-semialdehyde 2,1-aminomutase\tglutamate-1-semialdehyde aminotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3977\themL\t\tGO:0015994\t\tIDA\t\tP\tglutamate-1-semialdehyde 2,1-aminomutase\tglutamate-1-semialdehyde aminotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3977\themL\t\tGO:0051188\t\tIDA\t\tP\tglutamate-1-semialdehyde 2,1-aminomutase\tglutamate-1-semialdehyde aminotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3984\tlnt\t\tGO:0009276\t\tISS\t\tC\tapolipoprotein N-acyltransferase\tcutE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3984\tlnt\t\tGO:0044267\t\tISS\t\tP\tapolipoprotein N-acyltransferase\tcutE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3987\tleuS\t\tGO:0006520\t\tISS\t\tP\tleucyl-tRNA synthetase\tleucine--tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3987\tleuS\t\tGO:0044267\t\tISS\t\tP\tleucyl-tRNA synthetase\tleucine--tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3989\tholA\t\tGO:0006259\t\tISS\t\tP\tDNA polymerase III, delta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3997\tlipB\t\tGO:0004619\t\tISS\t\tF\tlipoate-protein ligase B\tlipoate biosynthesis protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3997\tlipB\t\tGO:0006520\t\tISS\t\tP\tlipoate-protein ligase B\tlipoate biosynthesis protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3997\tlipB\t\tGO:0006554\t\tISS\t\tP\tlipoate-protein ligase B\tlipoate biosynthesis protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3997\tlipB\t\tGO:0006744\t\tISS\t\tP\tlipoate-protein ligase B\tlipoate biosynthesis protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3997\tlipB\t\tGO:0046656\t\tISS\t\tP\tlipoate-protein ligase B\tlipoate biosynthesis protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3997\tlipB\t\tGO:0051188\t\tISS\t\tP\tlipoate-protein ligase B\tlipoate biosynthesis protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3999\tdacC\t\tGO:0009276\t\tISS\t\tC\tD-ala-D-ala-carboxypeptidase\tdacD|D-ala-D-ala endopeptidase|penicillin-binding protein 6 precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4002\trodA\t\tGO:0009276\t\tISS\t\tC\trod shape-determining protein\tmrdB|RodA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4003\tpbpA\t\tGO:0009276\t\tISS\t\tC\tpenicillin-binding protein 2\tmrdA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4006\tnadD1\t\tGO:0051188\t\tISS\t\tP\tnicotinate mononucleotide adenylyltransferase NadD1\tybeN|NAD biosynthetic protein NadD|nadD|nicotinic acid mononucleotide adenylyltransferase|nadD1|nicotinate mononucleotide adenylyltransferase NadD1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4007\tproA\t\tGO:0006520\t\tISS\t\tP\tgamma-glutamyl phosphate reductase\tproB|Glutamate-semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4007\tproA\t\tGO:0051188\t\tISS\t\tP\tgamma-glutamyl phosphate reductase\tproB|Glutamate-semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4020\tmpl\t\tGO:0009276\t\tISS\t\tC\tUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase\tmurein tripeptide ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4024\teutB\t\tGO:0008152\t\tISS\t\tP\tethanolamine ammonia-lyase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4031\tppa\t\tGO:0008152\t\tISS\t\tP\tinorganic pyrophosphatase\tipyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4034\taqpZ\t\tGO:0006810\t\tISS\t\tP\taquaporin Z\tbniP|bacterial nodulin-like intrinsic protein|water channel protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4042\txseB\t\tGO:0006259\t\tISS\t\tP\texodeoxyribonuclease VII small subunit\tExonuclease VII\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4043\tispA\t\tGO:0051188\t\tISS\t\tP\tgeranyltranstransferase\tFPP synthase|farnesyldiphosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4044\tdxs\t\tGO:0051188\t\tISS\t\tP\t1-deoxyxylulose-5-phosphate synthase\tdxp synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4047\tribA\t\tGO:0051188\t\tISS\t\tP\tGTP cyclohydrolase II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4050\tpgpA\t\tGO:0044255\t\tISS\t\tP\tphosphatidylglycerophosphatase A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4051\tthiL\t\tGO:0051188\t\tISS\t\tP\tthiamine monophosphate kinase\tthiamin-phosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4052\tnusB\t\tGO:0016070\t\tISS\t\tP\tNusB protein\tssyB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4053\tribE\t\tGO:0051188\t\tISS\t\tP\t6,7-dimethyl-8-ribityllumazine synthase\tribH|lumazine synthase|riboflavin synthase beta chain\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4054\tribB\t\tGO:0051188\t\tISS\t\tP\tGTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase\tribA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4055\tribC\t\tGO:0051188\t\tISS\t\tP\triboflavin synthase alpha chain\tribB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4056\tribD\t\tGO:0051188\t\tISS\t\tP\triboflavin-specific deaminase/reductase\tribG|riboflavin biosynthetic protein RibG|bifunctional pyrimidine deaminase/reductase in pathway of riboflavin biosynthesis\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4067\toprG\t\tGO:0016020\t\tIDA\t\tC\tOuter membrane protein OprG precursor\tyciD|ompW\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4082\tcupB5\t\tGO:0006928\t\tISS\t\tP\tadhesive protein CupB5\tprobable adhesin|cupB5\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4091\thpaA\t\tGO:0015976\t\tISS\t\tP\t4-hydroxyphenylacetate 3-monooxygenase large chain\tp-hydroxyphenylacetate 3-hydroxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4092\thpaC\t\tGO:0015976\t\tISS\t\tP\t4-hydroxyphenylacetate 3-monooxygenase small chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4110\tampC\t\tGO:0004035\t\tISS\t\tF\tbeta-lactamase precursor\tcephalosporinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4114\tPA4114\t\tGO:0003824\t\tISS\t\tF\tlysine decarboxylase\tbltD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4119\taph\t\tGO:0046677\t\tIDA\t\tP\taminoglycoside 3'-phosphotransferase type IIb\tAPH3'IIb\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4123\thpcC\t\tGO:0015976\t\tISS\t\tP\t5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase\thpaE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4124\thpcB\t\tGO:0015976\t\tISS\t\tP\thomoprotocatechuate 2,3-dioxygenase\thpaD|3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPC dioxygenase)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4124\thpcB\t\tGO:0044248\t\tISS\t\tP\thomoprotocatechuate 2,3-dioxygenase\thpaD|3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPC dioxygenase)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4125\thpcD\t\tGO:0015976\t\tISS\t\tP\t5-carboxymethyl-2-hydroxymuconate isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4125\thpcD\t\tGO:0044248\t\tISS\t\tP\t5-carboxymethyl-2-hydroxymuconate isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4127\thpcG\t\tGO:0015976\t\tISS\t\tP\t2-oxo-hept-3-ene-1,7-dioate hydratase\thpaH\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4127\thpcG\t\tGO:0044248\t\tISS\t\tP\t2-oxo-hept-3-ene-1,7-dioate hydratase\thpaH\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4133\tPA4133\t\tGO:0006091\t\tISS\t\tP\tcytochrome c oxidase subunit (cbb3-type)\tccoN|fixN|cytN|cytochrome c oxidase polypeptide I homolog  (heme b/copper cytochrome c oxidase subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4138\ttyrS\t\tGO:0000162\t\tISS\t\tP\ttyrosyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4138\ttyrS\t\tGO:0003917\t\tISS\t\tF\ttyrosyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4138\ttyrS\t\tGO:0006520\t\tISS\t\tP\ttyrosyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4138\ttyrS\t\tGO:0006571\t\tISS\t\tP\ttyrosyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4138\ttyrS\t\tGO:0009094\t\tISS\t\tP\ttyrosyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4138\ttyrS\t\tGO:0043039\t\tISS\t\tP\ttyrosyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4138\ttyrS\t\tGO:0044267\t\tISS\t\tP\ttyrosyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4147\tacoR\t\tGO:0006355\t\tISS\t\tP\ttranscriptional regulator AcoR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4151\tacoB\t\tGO:0015976\t\tISS\t\tP\tacetoin catabolism protein AcoB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4151\tacoB\t\tGO:0044248\t\tISS\t\tP\tacetoin catabolism protein AcoB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4160\tfepD\t\tGO:0016020\t\tISS\t\tC\tferric enterobactin transport protein FepD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4161\tfepG\t\tGO:0016020\t\tISS\t\tC\tferric enterobactin transport protein FepG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4175\tpiv\t\tGO:0003824\t\tISS\t\tF\tprotease IV\tprpL|probable endoproteinase Arg-C precursor|Pvds-regulated endoprotease, lysyl class|piv|protease IV\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4176\tppiC2\t\tGO:0006457\t\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase C2\tRotamase C|Parvulin, PPIase C\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4176\tppiC2\t\tGO:0044267\t\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase C2\tRotamase C|Parvulin, PPIase C\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4205\tmexG\t\tGO:0009372\t\tIDA\t\tP\thypothetical protein\tmexG\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4205\tmexG\t\tGO:0016020\t\tIDA\t\tC\thypothetical protein\tmexG\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4206\tmexH\t\tGO:0009372\t\tIDA\t\tP\tprobable Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor\tprobable RND efflux membrane fusion protein precursor|mexH\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4207\tmexI\t\tGO:0006810\t\tIDA\t\tP\tprobable Resistance-Nodulation-Cell Division (RND) efflux transporter\tprobable RND efflux transporter|mexI\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4207\tmexI\t\tGO:0016020\t\tIDA\t\tC\tprobable Resistance-Nodulation-Cell Division (RND) efflux transporter\tprobable RND efflux transporter|mexI\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4208\topmD\t\tGO:0006810\t\tIDA\t\tP\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4208\topmD\t\tGO:0016020\t\tIDA\t\tC\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4209\tphzM\t\tGO:0002047\t\tIDA\t\tP\tprobable phenazine-specific methyltransferase\tprobable O-methyltransferase|phzM\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4209\tphzM\t\tGO:0003824\t\tIDA\t\tF\tprobable phenazine-specific methyltransferase\tprobable O-methyltransferase|phzM\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4213\tphzD1\t\tGO:0004654\t\tISS\t\tF\tphenazine biosynthesis protein PhzD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4217\tphzS\t\tGO:0002047\t\tIDA\t\tP\tflavin-containing monooxygenase\tprobable FAD-dependent monooxygenase|phzS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4217\tphzS\t\tGO:0003824\t\tIDA\t\tF\tflavin-containing monooxygenase\tprobable FAD-dependent monooxygenase|phzS\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4221\tfptA\t\tGO:0006810\t\tIDA\t\tP\tFe(III)-pyochelin outer membrane receptor precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4224\tpchG\t\tGO:0006810\t\tIDA\t\tP\tpyochelin biosynthetic protein PchG\tpchG|pyochelin biosynthetic protein PchG\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4224\tpchG\t\tGO:0016020\t\tIDA\t\tC\tpyochelin biosynthetic protein PchG\tpchG|pyochelin biosynthetic protein PchG\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4225\tpchF\t\tGO:0006810\t\tIDA\t\tP\tpyochelin synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4225\tpchF\t\tGO:0042864\t\tIDA\t\tP\tpyochelin synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4226\tpchE\t\tGO:0006810\t\tIDA\t\tP\tdihydroaeruginoic acid synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4226\tpchE\t\tGO:0042864\t\tIDA\t\tP\tdihydroaeruginoic acid synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4227\tpchR\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator PchR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4231\tpchA\t\tGO:0042864\t\tIDA\t\tP\tsalicylate biosynthesis isochorismate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4232\tssb\t\tGO:0006259\t\tIDA\t\tP\tsingle-stranded DNA-binding protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4234\tuvrA\t\tGO:0006259\t\tISS\t\tP\texcinuclease ABC subunit A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4235\tftnA\t\tGO:0050896\t\tIDA\t\tP\tbacterial ferritin\tbacterial ferritin|ftnA|FtnA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4236\tkatA\t\tGO:0050896\t\tIDA\t\tP\tcatalase\tcatA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4237\trplQ\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L17\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4239\trpsD\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S4\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4240\trpsK\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S11\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4241\trpsM\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S13\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4242\trpmJ\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L36\tribosomal protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4243\tsecY\t\tGO:0046903\t\tISS\t\tP\tsecretion protein SecY\tprlA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4244\trplO\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L15\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4245\trpmD\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L30\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4246\trpsE\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S5\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4247\trplR\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L18\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4248\trplF\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L6\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4249\trpsH\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4250\trpsN\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S14\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4251\trplE\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L5\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4252\trplX\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L24\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4253\trplN\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L14\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4254\trpsQ\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S17\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4255\trpmC\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L29\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4256\trplP\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L16\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4257\trpsC\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S3\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4258\trplV\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L22\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4259\trpsS\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S19\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4260\trplB\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4261\trplW\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L23\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4262\trplD\t\tGO:0016070\t\tISS\t\tP\t50S ribosomal protein L4\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4262\trplD\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L4\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4263\trplC\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L3\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4264\trpsJ\t\tGO:0016070\t\tISS\t\tP\t30S ribosomal protein S10\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4264\trpsJ\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S10\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4265\ttufA\t\tGO:0044267\t\tISS\t\tP\telongation factor Tu\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4266\tfusA1\t\tGO:0044267\t\tISS\t\tP\telongation factor G\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4267\trpsG\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S7\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4268\trpsL\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S12\tstr\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4271\trplL\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L7 / L12\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4272\trplJ\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L10\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4273\trplA\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4274\trplK\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L11\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4275\tnusG\t\tGO:0016070\t\tISS\t\tP\ttranscription antitermination protein NusG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4280\tbirA\t\tGO:0051188\t\tISS\t\tP\tBirA bifunctional protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4281\tsbcD\t\tGO:0006259\t\tISS\t\tP\texonuclease SbcD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4307\tpctC\t\tGO:0006935\t\tIDA\t\tP\tchemotactic transducer PctC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4307\tpctC\t\tGO:0050896\t\tIDA\t\tP\tchemotactic transducer PctC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4307\tpctC\t\tGO:0030261\t\t\t\tP\tchemotactic transducer PctC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4309\tpctA\t\tGO:0006935\t\tIDA\t\tP\tchemotactic transducer PctA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4309\tpctA\t\tGO:0050896\t\tIDA\t\tP\tchemotactic transducer PctA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4310\tpctB\t\tGO:0006935\t\tIDA\t\tP\tchemotactic transducer PctB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4310\tpctB\t\tGO:0050896\t\tIDA\t\tP\tchemotactic transducer PctB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4310\tpctB\t\tGO:0030261\t\t\t\tP\tchemotactic transducer PctB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4314\tpurU1\t\tGO:0008854\t\tISS\t\tF\tformyltetrahydrofolate deformylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4314\tpurU1\t\tGO:0009117\t\tISS\t\tP\tformyltetrahydrofolate deformylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4314\tpurU1\t\tGO:0019752\t\tISS\t\tP\tformyltetrahydrofolate deformylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4314\tpurU1\t\tGO:0046487\t\tISS\t\tP\tformyltetrahydrofolate deformylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4315\tmvaT\t\tGO:0006355\t\tISS\t\tP\ttranscriptional regulator MvaT, P16 subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4316\tsbcB\t\tGO:0006259\t\tISS\t\tP\texodeoxyribonuclease I\texonuclease I, dRpase|DNA deoxyribophosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0003840\t\tISS\t\tF\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0006090\t\tISS\t\tP\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0006091\t\tISS\t\tP\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0006094\t\tISS\t\tP\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0006163\t\tISS\t\tP\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0015977\t\tISS\t\tP\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0015976\t\tISS\t\tP\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0044248\t\tISS\t\tP\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4356\txenB\t\tGO:0046677\t\tISS\t\tP\txenobiotic reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4356\txenB\t\tGO:0050896\t\tISS\t\tP\txenobiotic reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4363\ticiA\t\tGO:0006259\t\tISS\t\tP\tinhibitor of chromosome initiation IciA\tlysR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4366\tsodB\t\tGO:0016775\t\tIDA\t\tF\tsuperoxide dismutase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4366\tsodB\t\tGO:0050896\t\tIDA\t\tP\tsuperoxide dismutase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4370\ticmP\t\tGO:0016020\t\tIDA\t\tC\tInsulin-cleaving metalloproteinase outer membrane protein precursor\tinsulin-cleaving membrane proteinase ICMP|icmP|outer membrane metalloproteinase precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4376\tpncB2\t\tGO:0051188\t\tISS\t\tP\tnicotinate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4378\twarB\t\tGO:0050896\t\tISS\t\tP\tWarB\twarB|inaA|WarB|InaA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4386\tgroES\t\tGO:0006457\t\tIDA\t\tP\tGroES protein\tmopB|10 kD chaperonin\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4397\tpanE\t\tGO:0009117\t\tISS\t\tP\tketopantoate reductase\tabpA|alternative pyrimidine biosynthesis protein|thiamin biosynthesis protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4402\targJ\t\tGO:0006520\t\tISS\t\tP\tglutamate N-acetyltransferase\tornithine transacetylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4402\targJ\t\tGO:0008137\t\tISS\t\tF\tglutamate N-acetyltransferase\tornithine transacetylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4407\tftsZ\t\tGO:0043093\t\tISS\t\tP\tcell division protein FtsZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4409\tftsQ\t\tGO:0043093\t\tISS\t\tP\tcell division protein FtsQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4413\tftsW\t\tGO:0043093\t\tISS\t\tP\tcell division protein FtsW\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4418\tftsI\t\tGO:0043093\t\tIDA\t\tP\tpenicillin-binding protein 3\tpbpB|cell-division protein FtsI\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4419\tftsL\t\tGO:0043093\t\tISS\t\tP\tcell division protein FtsL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4427\tsspB\t\tGO:0050896\t\tISS\t\tP\tstringent starvation protein B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4439\ttrpS\t\tGO:0006520\t\tISS\t\tP\ttryptophanyl-tRNA synthetase\ttryptophan-tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4439\ttrpS\t\tGO:0044267\t\tISS\t\tP\ttryptophanyl-tRNA synthetase\ttryptophan-tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4443\tcysD\t\tGO:0006520\t\tIDA\t\tP\tATP sulfurylase small subunit\tsulfate adenylate transferase subunit 2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4443\tcysD\t\tGO:0008152\t\tIDA\t\tP\tATP sulfurylase small subunit\tsulfate adenylate transferase subunit 2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4446\talgW\t\tGO:0044267\t\tIDA\t\tP\tAlgW protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4446\talgW\t\tGO:0050896\t\tIDA\t\tP\tAlgW protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4447\thisC1\t\tGO:0006520\t\tISS\t\tP\thistidinol-phosphate aminotransferase\this8|imidazole acetol-phosphate transaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4448\thisD\t\tGO:0006520\t\tISS\t\tP\thistidinol dehydrogenase\thisX\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4449\thisG\t\tGO:0004148\t\tISS\t\tF\tATP-phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4449\thisG\t\tGO:0006520\t\tISS\t\tP\tATP-phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4462\trpoN\t\tGO:0006355\t\tIDA\t\tP\tRNA polymerase sigma-54 factor\tntrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4464\tptsN\t\tGO:0006810\t\tISS\t\tP\tnitrogen regulatory IIA protein\tcomponent A|probable phosphotransferase enzyme II\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4468\tsodM\t\tGO:0008965\t\tIDA\t\tF\tsuperoxide dismutase\tsodA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4468\tsodM\t\tGO:0050896\t\tIDA\t\tP\tsuperoxide dismutase\tsodA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4477\tcafA\t\tGO:0043093\t\tISS\t\tP\tcytoplasmic axial filament protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4480\tmreC\t\tGO:0009276\t\tISS\t\tC\trod shape-determining protein MreC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4480\tmreC\t\tGO:0043093\t\tISS\t\tP\trod shape-determining protein MreC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4481\tmreB\t\tGO:0009276\t\tISS\t\tC\trod shape-determining protein MreB\trodY|envB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4481\tmreB\t\tGO:0043093\t\tISS\t\tP\trod shape-determining protein MreB\trodY|envB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4522\tampD\t\tGO:0009276\t\tISS\t\tC\tbeta-lactamase expression regulator AmpD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4538\tndh\t\tGO:0000721\t\tISS\t\tF\tNADH dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4538\tndh\t\tGO:0006091\t\tISS\t\tP\tNADH dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4544\trluD\t\tGO:0016070\t\tISS\t\tP\tpseudouridine synthase\tyfiI\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4545\tcomL\t\tGO:0009276\t\tISS\t\tC\tcompetence protein ComL\typiY\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4550\tfimU\t\tGO:0009297\t\tIDA\t\tP\ttype 4 fimbrial biogenesis protein FimU\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4557\tlytB\t\tGO:0050896\t\tISS\t\tP\tLytB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4559\tlspA\t\tGO:0004045\t\tISS\t\tF\tprolipoprotein signal peptidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4559\tlspA\t\tGO:0044267\t\tISS\t\tP\tprolipoprotein signal peptidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4559\tlspA\t\tGO:0046903\t\tISS\t\tP\tprolipoprotein signal peptidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4560\tileS\t\tGO:0006520\t\tISS\t\tP\tisoleucyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4560\tileS\t\tGO:0044267\t\tISS\t\tP\tisoleucyl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4566\tobg\t\tGO:0050896\t\tISS\t\tP\tGTP-binding protein Obg\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4567\trpmA\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L27\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4568\trplU\t\tGO:0044267\t\tISS\t\tP\t50S ribosomal protein L21\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4569\tispB\t\tGO:0003871\t\tISS\t\tF\toctaprenyl-diphosphate synthase\tcel\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4569\tispB\t\tGO:0006091\t\tISS\t\tP\toctaprenyl-diphosphate synthase\tcel\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4569\tispB\t\tGO:0051188\t\tISS\t\tP\toctaprenyl-diphosphate synthase\tcel\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4581\trtcR\t\tGO:0006355\t\tISS\t\tP\ttranscriptional regulator RtcR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4585\trtcA\t\tGO:0016070\t\tISS\t\tP\tRNA 3'-terminal phosphate cyclase\tyhgK\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4588\tgdhA\t\tGO:0006520\t\tISS\t\tP\tglutamate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4590\tpra\t\tGO:0006810\t\tIDA\t\tP\tprotein activator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4590\tpra\t\tGO:0015976\t\tIDA\t\tP\tprotein activator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4590\tpra\t\tGO:0044248\t\tIDA\t\tP\tprotein activator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4597\toprJ\t\tGO:0006810\t\tIDA\t\tP\tMultidrug efflux outer membrane protein OprJ precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4597\toprJ\t\tGO:0016020\t\tIDA\t\tC\tMultidrug efflux outer membrane protein OprJ precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4597\toprJ\t\tGO:0046677\t\tIDA\t\tP\tMultidrug efflux outer membrane protein OprJ precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4598\tmexD\t\tGO:0006810\t\tIDA\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexD\tRND multidrug efflux transporter MexD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4598\tmexD\t\tGO:0016020\t\tIDA\t\tC\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexD\tRND multidrug efflux transporter MexD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4598\tmexD\t\tGO:0046677\t\tIDA\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexD\tRND multidrug efflux transporter MexD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4598\tmexD\t\tGO:0006811\t\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexD\tRND multidrug efflux transporter MexD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4599\tmexC\t\tGO:0046677\t\tIDA\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexC precursor\tRND multidrug efflux membrane fusion protein MexC precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4600\tnfxB\t\tGO:0006355\t\tIDA\t\tP\ttranscriptional regulator NfxB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4601\tmorA\t\tGO:0003674\t\tIDA\t\tF\tmotility regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4601\tmorA\t\tGO:0005575\t\tIDA\t\tC\tmotility regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4601\tmorA\t\tGO:0008150\t\tIDA\t\tP\tmotility regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4601\tmorA\t\tGO:0016020\t\tIDA\t\tC\tmotility regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4602\tglyA3\t\tGO:0003863\t\tISS\t\tF\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4602\tglyA3\t\tGO:0006520\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4602\tglyA3\t\tGO:0006544\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4602\tglyA3\t\tGO:0006554\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4602\tglyA3\t\tGO:0006563\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4602\tglyA3\t\tGO:0006566\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4602\tglyA3\t\tGO:0015947\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4609\tradA\t\tGO:0006259\t\tISS\t\tP\tDNA repair protein RadA\tsms\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4613\tkatB\t\tGO:0004315\t\tIDA\t\tF\tcatalase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4613\tkatB\t\tGO:0050896\t\tIDA\t\tP\tcatalase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4614\tmscL\t\tGO:0016020\t\tISS\t\tC\tconductance mechanosensitive channel\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4614\tmscL\t\tGO:0050896\t\tISS\t\tP\tconductance mechanosensitive channel\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4626\thprA\t\tGO:0008152\t\tISS\t\tP\tglycerate dehydrogenase\thydroxypyruvate reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4646\tupp\t\tGO:0004851\t\tISS\t\tF\turacil phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4646\tupp\t\tGO:0006220\t\tISS\t\tP\turacil phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4646\tupp\t\tGO:0009117\t\tISS\t\tP\turacil phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4660\tphr\t\tGO:0006259\t\tISS\t\tP\tdeoxyribodipyrimidine photolyase\tDNA photolyase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4670\tprs\t\tGO:0004478\t\tISS\t\tF\tribose-phosphate pyrophosphokinase\tprsA|phosphoribosylpyrophosphate synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4670\tprs\t\tGO:0006098\t\tISS\t\tP\tribose-phosphate pyrophosphokinase\tprsA|phosphoribosylpyrophosphate synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4670\tprs\t\tGO:0009117\t\tISS\t\tP\tribose-phosphate pyrophosphokinase\tprsA|phosphoribosylpyrophosphate synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4670\tprs\t\tGO:0015976\t\tISS\t\tP\tribose-phosphate pyrophosphokinase\tprsA|phosphoribosylpyrophosphate synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4670\tprs\t\tGO:0044248\t\tISS\t\tP\tribose-phosphate pyrophosphokinase\tprsA|phosphoribosylpyrophosphate synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4672\tPA4672\t\tGO:0044267\t\tISS\t\tP\tpeptidyl-tRNA hydrolase\tpth\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4678\trimI\t\tGO:0044267\t\tISS\t\tP\tpeptide n-acetyltransferase RimI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4693\tpssA\t\tGO:0044255\t\tISS\t\tP\tphosphatidylserine synthase\tCDP-diacylglycerol--serine O-phosphatidyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4710\tphuR\t\tGO:0022857\t\t\t\tF\tHeme/Hemoglobin uptake outer membrane receptor PhuR precursor\tHaem/Haemoglobin uptake outer membrane receptor PhuR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4720\ttrmA\t\tGO:0016070\t\tISS\t\tP\ttRNA (uracil-5-)-methyltransferase\tRUMT|trna(m-5U54)-methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4723\tdksA\t\tGO:0050896\t\tISS\t\tP\tsuppressor protein DksA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4725\tcbrA\t\tGO:0044248\t\tIDA\t\tP\ttwo-component sensor CbrA\tcbrA|two-component sensor CbrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4726\tcbrB\t\tGO:0006355\t\tIDA\t\tP\ttwo-component response regulator CbrB\tcbrB|two-component response regulator CbrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4726\tcbrB\t\tGO:0015976\t\tIDA\t\tP\ttwo-component response regulator CbrB\tcbrB|two-component response regulator CbrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4726\tcbrB\t\tGO:0044248\t\tIDA\t\tP\ttwo-component response regulator CbrB\tcbrB|two-component response regulator CbrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4729\tpanB\t\tGO:0000104\t\tISS\t\tF\t3-methyl-2-oxobutanoate hydroxymethyltransferase\talpha-ketoisovalerate hydroxymethyltransferase|ketopantoate hydroxymethyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4729\tpanB\t\tGO:0015937\t\tISS\t\tP\t3-methyl-2-oxobutanoate hydroxymethyltransferase\talpha-ketoisovalerate hydroxymethyltransferase|ketopantoate hydroxymethyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4729\tpanB\t\tGO:0051188\t\tISS\t\tP\t3-methyl-2-oxobutanoate hydroxymethyltransferase\talpha-ketoisovalerate hydroxymethyltransferase|ketopantoate hydroxymethyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4730\tpanC\t\tGO:0051188\t\tISS\t\tP\tpantoate--beta-alanine ligase\tpantoate activating enzyme|pantothenate synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4733\tacsB\t\tGO:0004822\t\tISS\t\tF\tacetyl-coenzyme A synthetase\tacetate-CoA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4733\tacsB\t\tGO:0008152\t\tISS\t\tP\tacetyl-coenzyme A synthetase\tacetate-CoA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4733\tacsB\t\tGO:0015976\t\tISS\t\tP\tacetyl-coenzyme A synthetase\tacetate-CoA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4733\tacsB\t\tGO:0019541\t\tISS\t\tP\tacetyl-coenzyme A synthetase\tacetate-CoA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4733\tacsB\t\tGO:0044248\t\tISS\t\tP\tacetyl-coenzyme A synthetase\tacetate-CoA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4740\tpnp\t\tGO:0016070\t\tISS\t\tP\tpolyribonucleotide nucleotidyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4741\trpsO\t\tGO:0044267\t\tISS\t\tP\t30S ribosomal protein S15\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4742\ttruB\t\tGO:0016070\t\tISS\t\tP\ttRNA pseudouridine 55 synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4742\ttruB\t\tGO:0044267\t\tISS\t\tP\ttRNA pseudouridine 55 synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4744\tinfB\t\tGO:0044267\t\tISS\t\tP\ttranslation initiation factor IF-2\tinitiation factor IF2-alpha\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4745\tnusA\t\tGO:0016070\t\tISS\t\tP\tN utilization substance protein A\tL factor\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4755\tgreA\t\tGO:0016070\t\tISS\t\tP\ttranscription elongation factor GreA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4759\tdapB\t\tGO:0004425\t\tIDA\t\tF\tdihydrodipicolinate reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4759\tdapB\t\tGO:0006520\t\tISS\t\tP\tdihydrodipicolinate reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4759\tdapB\t\tGO:0009085\t\tISS\t\tP\tdihydrodipicolinate reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4762\tgrpE\t\tGO:0000774\t\t\t\tF\theat shock protein GrpE\tHsp24|heat shock protein B25.3\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4763\trecN\t\tGO:0006259\t\tISS\t\tP\tDNA repair protein RecN\trecombination protein N\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4764\tfur\t\tGO:0006355\t\tIDA\t\tP\tferric uptake regulation protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4765\tomlA\t\tGO:0006810\t\tIDA\t\tP\tOuter membrane lipoprotein OmlA precursor\toprX\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4765\tomlA\t\tGO:0016020\t\tIDA\t\tC\tOuter membrane lipoprotein OmlA precursor\toprX\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4768\tsmpB\t\tGO:0044267\t\tISS\t\tP\tSmpB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4770\tlldP\t\tGO:0006810\t\tISS\t\tP\tL-lactate permease\tlctP\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4813\tlipC\t\tGO:0044255\t\tIDA\t\tP\tlipase LipC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4825\tmgtA\t\tGO:0003905\t\tISS\t\tF\tMg(2+) transport ATPase, P-type 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4825\tmgtA\t\tGO:0006810\t\tISS\t\tP\tMg(2+) transport ATPase, P-type 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4843\tgcbA\t\tGO:0009975\t\t\t\tF\tGcbA\tAdcA|adcA|GcbA|gcbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4844\tctpL\t\tGO:0030261\t\t\t\tP\tCtpL\tCtpL|ctpL\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4845\tdipZ\t\tGO:0006457\t\tIDA\t\tP\tthiol:disulfide interchange protein DipZ\tcycZ|dsbD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4845\tdipZ\t\tGO:0044267\t\tIDA\t\tP\tthiol:disulfide interchange protein DipZ\tcycZ|dsbD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4847\taccB\t\tGO:0004642\t\tISS\t\tF\tbiotin carboxyl carrier protein (BCCP)\tfabE|acetyl-CoA carboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4847\taccB\t\tGO:0006090\t\tIDA\t\tP\tbiotin carboxyl carrier protein (BCCP)\tfabE|acetyl-CoA carboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4847\taccB\t\tGO:0019541\t\tIDA\t\tP\tbiotin carboxyl carrier protein (BCCP)\tfabE|acetyl-CoA carboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4847\taccB\t\tGO:0044255\t\tIDA\t\tP\tbiotin carboxyl carrier protein (BCCP)\tfabE|acetyl-CoA carboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4848\taccC\t\tGO:0044255\t\tIDA\t\tP\tbiotin carboxylase\tacetyl-CoA carboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4853\tfis\t\tGO:0006259\t\tISS\t\tP\tDNA-binding protein Fis\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4853\tfis\t\tGO:0006355\t\tISS\t\tP\tDNA-binding protein Fis\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4853\tfis\t\tGO:0016070\t\tISS\t\tP\tDNA-binding protein Fis\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4854\tpurH\t\tGO:0009117\t\tISS\t\tP\tphosphoribosylaminoimidazolecarboxamide formyltransferase\tIMP cyclohydrolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4855\tpurD\t\tGO:0006163\t\tISS\t\tP\tphosphoribosylamine--glycine ligase\tphosphoribosylglycineamide synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4855\tpurD\t\tGO:0008764\t\tISS\t\tF\tphosphoribosylamine--glycine ligase\tphosphoribosylglycineamide synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4855\tpurD\t\tGO:0009117\t\tISS\t\tP\tphosphoribosylamine--glycine ligase\tphosphoribosylglycineamide synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4856\tretS\t\tGO:0000160\t\tISS\t\tP\tRetS (Regulator of Exopolysaccharide and Type III Secretion)\trtsM|RtsM|retS|RetS (Regulator of Exopolysaccharide and Type III Secretion)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4864\tureD\t\tGO:0008152\t\tISS\t\tP\turease accessory protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4876\tosmE\t\tGO:0016020\t\tISS\t\tC\tosmotically inducible lipoprotein OsmE\tosmE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4876\tosmE\t\tGO:0050896\t\tISS\t\tP\tosmotically inducible lipoprotein OsmE\tosmE\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4897\tPA4897\t\tGO:0022857\t\t\t\tF\tTonB-dependent receptor\toptI|TonB-dependent receptor|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4901\tmdlC\t\tGO:0015976\t\tISS\t\tP\tbenzoylformate decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4901\tmdlC\t\tGO:0016818\t\tISS\t\tF\tbenzoylformate decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4901\tmdlC\t\tGO:0019439\t\tISS\t\tP\tbenzoylformate decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4901\tmdlC\t\tGO:0044248\t\tISS\t\tP\tbenzoylformate decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4904\tvanA\t\tGO:0015976\t\tISS\t\tP\tvanillate O-demethylase oxygenase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4904\tvanA\t\tGO:0019439\t\tISS\t\tP\tvanillate O-demethylase oxygenase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4904\tvanA\t\tGO:0044248\t\tISS\t\tP\tvanillate O-demethylase oxygenase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4905\tvanB\t\tGO:0015976\t\tISS\t\tP\tvanillate O-demethylase oxidoreductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4905\tvanB\t\tGO:0019439\t\tISS\t\tP\tvanillate O-demethylase oxidoreductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4905\tvanB\t\tGO:0044248\t\tISS\t\tP\tvanillate O-demethylase oxidoreductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4920\tnadE\t\tGO:0006520\t\tISS\t\tP\tNH3-dependent NAD synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4920\tnadE\t\tGO:0051188\t\tISS\t\tP\tNH3-dependent NAD synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4930\talr\t\tGO:0004418\t\tISS\t\tF\tbiosynthetic alanine racemase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4930\talr\t\tGO:0006520\t\tISS\t\tP\tbiosynthetic alanine racemase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4938\tpurA\t\tGO:0004077\t\tISS\t\tF\tadenylosuccinate synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4938\tpurA\t\tGO:0006163\t\tISS\t\tP\tadenylosuccinate synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4938\tpurA\t\tGO:0006520\t\tISS\t\tP\tadenylosuccinate synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4938\tpurA\t\tGO:0006522\t\tISS\t\tP\tadenylosuccinate synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4938\tpurA\t\tGO:0006531\t\tISS\t\tP\tadenylosuccinate synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4938\tpurA\t\tGO:0009117\t\tISS\t\tP\tadenylosuccinate synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4945\tmiaA\t\tGO:0044267\t\tISS\t\tP\tdelta 2-isopentenylpyrophosphate transferase\ttRNA:isopentenyladenine transferase|tRNA prenyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4945\tmiaA\t\tGO:0050896\t\tISS\t\tP\tdelta 2-isopentenylpyrophosphate transferase\ttRNA:isopentenyladenine transferase|tRNA prenyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4947\tamiB\t\tGO:0009276\t\tISS\t\tC\tN-acetylmuramoyl-L-alanine amidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4951\torn\t\tGO:0016070\t\tISS\t\tP\toligoribonuclease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4951\torn\t\tGO:0016775\t\tISS\t\tF\toligoribonuclease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4957\tpsd\t\tGO:0006520\t\tISS\t\tP\tphosphatidylserine decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4957\tpsd\t\tGO:0016818\t\tISS\t\tF\tphosphatidylserine decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4957\tpsd\t\tGO:0044255\t\tISS\t\tP\tphosphatidylserine decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4969\tcpdA\t\tGO:0004115\t\tIDA\t\tF\tCyclic AMP (cAMP) Phosphodiesterase, CpdA\ticc|cpdA|Cyclic AMP (cAMP) Phosphodiesterase, CpdA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4971\taspP\t\tGO:0006091\t\tISS\t\tP\tadenosine diphosphate sugar pyrophosphatase\tyqiE|ASPPase|aspP|adenosine diphosphate sugar pyrophosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4975\tPA4975\t\tGO:0006091\t\tISS\t\tP\tNAD(P)H quinone oxidoreductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4988\twaaA\t\tGO:0009276\t\tISS\t\tC\t3-deoxy-D-manno-octulosonic-acid (KDO) transferase\tkdtA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4990\tPA4990\t\tGO:0006810\t\tISS\t\tP\tSMR multidrug efflux transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4990\tPA4990\t\tGO:0016020\t\tISS\t\tC\tSMR multidrug efflux transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4990\tPA4990\t\tGO:0046677\t\tISS\t\tP\tSMR multidrug efflux transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4996\trfaE\t\tGO:0009276\t\tISS\t\tC\tLPS biosynthesis protein RfaE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4997\tmsbA\t\tGO:0006810\t\tISS\t\tP\ttransport protein MsbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5011\twaaC\t\tGO:0008705\t\tISS\t\tF\theptosyltransferase I\trfaC|Heptose I transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5011\twaaC\t\tGO:0009103\t\tIDA\t\tP\theptosyltransferase I\trfaC|Heptose I transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5011\twaaC\t\tGO:0009276\t\tIDA\t\tC\theptosyltransferase I\trfaC|Heptose I transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5012\twaaF\t\tGO:0009103\t\tIDA\t\tP\theptosyltransferase II\trfaF|Heptose II transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5012\twaaF\t\tGO:0009276\t\tIDA\t\tC\theptosyltransferase II\trfaF|Heptose II transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5015\taceE\t\tGO:0006091\t\tIDA\t\tP\tpyruvate dehydrogenase\taceA|pyruvate dehydrogenase complex component E1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5015\taceE\t\tGO:0006520\t\tIDA\t\tP\tpyruvate dehydrogenase\taceA|pyruvate dehydrogenase complex component E1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5015\taceE\t\tGO:0008836\t\tIDA\t\tF\tpyruvate dehydrogenase\taceA|pyruvate dehydrogenase complex component E1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5016\taceF\t\tGO:0004488\t\tISS\t\tF\tdihydrolipoamide acetyltransferase\taceB|pyruvate dehydrogenase complex component E2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5016\taceF\t\tGO:0006090\t\tIDA\t\tP\tdihydrolipoamide acetyltransferase\taceB|pyruvate dehydrogenase complex component E2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5016\taceF\t\tGO:0006091\t\tIDA\t\tP\tdihydrolipoamide acetyltransferase\taceB|pyruvate dehydrogenase complex component E2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5016\taceF\t\tGO:0006094\t\tIDA\t\tP\tdihydrolipoamide acetyltransferase\taceB|pyruvate dehydrogenase complex component E2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5016\taceF\t\tGO:0006096\t\tIDA\t\tP\tdihydrolipoamide acetyltransferase\taceB|pyruvate dehydrogenase complex component E2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5016\taceF\t\tGO:0015976\t\tIDA\t\tP\tdihydrolipoamide acetyltransferase\taceB|pyruvate dehydrogenase complex component E2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5016\taceF\t\tGO:0044248\t\tIDA\t\tP\tdihydrolipoamide acetyltransferase\taceB|pyruvate dehydrogenase complex component E2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5018\tmsrA\t\tGO:0044267\t\tISS\t\tP\tpeptide methionine sulfoxide reductase\tpmsR|peptide met(o) reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5025\tmetY\t\tGO:0004794\t\tISS\t\tF\thomocysteine synthase\tO-acetylhomoserine (thiol)-lyase|O-acetyl-L-homoserine sulfhydrylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5025\tmetY\t\tGO:0006520\t\tISS\t\tP\thomocysteine synthase\tO-acetylhomoserine (thiol)-lyase|O-acetyl-L-homoserine sulfhydrylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5025\tmetY\t\tGO:0006790\t\tISS\t\tP\thomocysteine synthase\tO-acetylhomoserine (thiol)-lyase|O-acetyl-L-homoserine sulfhydrylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5034\themE\t\tGO:0004131\t\tISS\t\tF\turoporphyrinogen decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5034\themE\t\tGO:0051188\t\tISS\t\tP\turoporphyrinogen decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5038\taroB\t\tGO:0000162\t\tISS\t\tP\t3-dehydroquinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5038\taroB\t\tGO:0006520\t\tISS\t\tP\t3-dehydroquinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5038\taroB\t\tGO:0006571\t\tISS\t\tP\t3-dehydroquinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5038\taroB\t\tGO:0008797\t\tISS\t\tF\t3-dehydroquinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5038\taroB\t\tGO:0009094\t\tISS\t\tP\t3-dehydroquinate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5045\tponA\t\tGO:0009276\t\tISS\t\tC\tpenicillin-binding protein 1A\tmrcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5053\thslV\t\tGO:0006457\t\tISS\t\tP\theat shock protein HslV\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5054\thslU\t\tGO:0006457\t\tISS\t\tP\theat shock protein HslU\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5057\tphaD\t\tGO:0015976\t\tIDA\t\tP\tpoly(3-hydroxyalkanoic acid) depolymerase\tphaB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5057\tphaD\t\tGO:0044248\t\tIDA\t\tP\tpoly(3-hydroxyalkanoic acid) depolymerase\tphaB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5091\thutG\t\tGO:0006520\t\t\t\tP\tN-formylglutamate amidohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5092\thutI\t\tGO:0006520\t\tISS\t\tP\timidazolone-5-propionate hydrolase HutI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5092\thutI\t\tGO:0042132\t\tISS\t\tF\timidazolone-5-propionate hydrolase HutI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5098\thutH\t\tGO:0006520\t\tISS\t\tP\thistidine ammonia-lyase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5098\thutH\t\tGO:0003994\t\t\t\tF\thistidine ammonia-lyase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5100\thutU\t\tGO:0006520\t\tISS\t\tP\turocanase\turocanate hydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5105\thutC\t\tGO:0006355\t\tISS\t\tP\thistidine utilization repressor HutC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5105\thutC\t\tGO:0006547\t\tISS\t\tP\thistidine utilization repressor HutC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5105\thutC\t\tGO:0006355\t\tISS\t\tP\thistidine utilization repressor HutC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5107\tblc\t\tGO:0016020\t\tISS\t\tC\touter membrane lipoprotein Blc\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5111\tgloA3\t\tGO:0003961\t\tISS\t\tF\tlactoylglutathione lyase\tglo1|aldoketomutase, methylglyoxalase|glyoxalase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5111\tgloA3\t\tGO:0006090\t\tISS\t\tP\tlactoylglutathione lyase\tglo1|aldoketomutase, methylglyoxalase|glyoxalase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5119\tglnA\t\tGO:0006520\t\tISS\t\tP\tglutamine synthetase\tglutamate--ammonia ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5124\tntrB\t\tGO:0000160\t\tISS\t\tP\ttwo-component sensor NtrB\tNR(II)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5125\tntrC\t\tGO:0006355\t\tISS\t\tP\ttwo-component response regulator NtrC\tNR(I)\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5128\tsecB\t\tGO:0046903\t\tISS\t\tP\tsecretion protein SecB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5131\tpgm\t\tGO:0006094\t\tISS\t\tP\tphosphoglycerate mutase\tyibO|PGAM|phosphoglycerate phosphomutase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5131\tpgm\t\tGO:0008830\t\tISS\t\tF\tphosphoglycerate mutase\tyibO|PGAM|phosphoglycerate phosphomutase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5131\tpgm\t\tGO:0015976\t\tISS\t\tP\tphosphoglycerate mutase\tyibO|PGAM|phosphoglycerate phosphomutase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5131\tpgm\t\tGO:0044248\t\tISS\t\tP\tphosphoglycerate mutase\tyibO|PGAM|phosphoglycerate phosphomutase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5141\thisA\t\tGO:0006520\t\tISS\t\tP\tphosphoribosylformimino-5-aminoimidazole carboxamide\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5141\thisA\t\tGO:0006547\t\tISS\t\tP\tphosphoribosylformimino-5-aminoimidazole carboxamide\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5141\thisA\t\tGO:0008784\t\tISS\t\tF\tphosphoribosylformimino-5-aminoimidazole carboxamide\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5159\tPA5159\t\tGO:0006810\t\tISS\t\tP\tmultidrug resistance protein\temrA|pmrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5159\tPA5159\t\tGO:0046677\t\tISS\t\tP\tmultidrug resistance protein\temrA|pmrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5160\tPA5160\t\tGO:0006810\t\tISS\t\tP\tdrug efflux transporter\temrB|pmrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5160\tPA5160\t\tGO:0016020\t\tISS\t\tC\tdrug efflux transporter\temrB|pmrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5160\tPA5160\t\tGO:0050896\t\tISS\t\tP\tdrug efflux transporter\temrB|pmrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5162\trmlD\t\tGO:0009276\t\tISS\t\tC\tdTDP-4-dehydrorhamnose reductase\trfbD|dTDP-6-deoxy-L-mannose dehydrogenase|dTDP-L-rhamnose synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5163\trmlA\t\tGO:0009276\t\tISS\t\tC\tglucose-1-phosphate thymidylyltransferase\trfbA|dTDP-glucose synthase|dTDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5164\trmlC\t\tGO:0009276\t\tISS\t\tC\tdTDP-4-dehydrorhamnose 3,5-epimerase\trfbC|dTDP-L-rhamnose synthetase|dTDP-4-keto-6-deoxyglucose 3,5-epimerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5167\tdctP\t\tGO:0006835\t\tIDA\t\tP\tDctP\tDctP|dctP\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5193\tyrfI\t\tGO:0006457\t\tISS\t\tP\theat shock protein HSP33\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5197\trimK\t\tGO:0016070\t\tISS\t\tP\tribosomal protein S6 modification protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5197\trimK\t\tGO:0044267\t\tISS\t\tP\tribosomal protein S6 modification protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5206\targE\t\tGO:0006520\t\tISS\t\tP\tacetylornithine deacetylase\tN-acetylornithinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5206\targE\t\tGO:0008652\t\tISS\t\tP\tacetylornithine deacetylase\tN-acetylornithinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5206\targE\t\tGO:0008855\t\tISS\t\tF\tacetylornithine deacetylase\tN-acetylornithinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5213\tgcvP1\t\tGO:0006520\t\tISS\t\tP\tglycine cleavage system protein P1\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5213\tgcvP1\t\tGO:0006544\t\tISS\t\tP\tglycine cleavage system protein P1\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5213\tgcvP1\t\tGO:0006563\t\tISS\t\tP\tglycine cleavage system protein P1\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5213\tgcvP1\t\tGO:0006566\t\tISS\t\tP\tglycine cleavage system protein P1\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5213\tgcvP1\t\tGO:0045135\t\tIDA\t\tF\tglycine cleavage system protein P1\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5223\tubiH\t\tGO:0003992\t\tIDA\t\tF\tubiH protein\tvisB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5223\tubiH\t\tGO:0006091\t\tISS\t\tP\tubiH protein\tvisB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5223\tubiH\t\tGO:0006744\t\tISS\t\tP\tubiH protein\tvisB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5223\tubiH\t\tGO:0051188\t\tISS\t\tP\tubiH protein\tvisB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5260\themC\t\tGO:0051188\t\tISS\t\tP\tporphobilinogen deaminase\tpopE|hydroxymethylbilane synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5263\targH\t\tGO:0006520\t\tISS\t\tP\targininosuccinate lyase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5263\targH\t\tGO:0006525\t\tISS\t\tP\targininosuccinate lyase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5263\targH\t\tGO:0006560\t\tISS\t\tP\targininosuccinate lyase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5263\targH\t\tGO:0008840\t\tISS\t\tF\targininosuccinate lyase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5276\tlppL\t\tGO:0009276\t\tIDA\t\tC\tLipopeptide LppL precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5277\tlysA\t\tGO:0006520\t\tISS\t\tP\tdiaminopimelate decarboxylase\tDAP decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5287\tamtB\t\tGO:0006810\t\tISS\t\tP\tammonium transporter AmtB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5287\tamtB\t\tGO:0016020\t\tISS\t\tC\tammonium transporter AmtB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5292\tpchP\t\tGO:0003674\t\tIDA\t\tF\tphosphorylcholine phosphatase\tpcP|phosphochlorylcholine phosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5292\tpchP\t\tGO:0005575\t\tIDA\t\tC\tphosphorylcholine phosphatase\tpcP|phosphochlorylcholine phosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5292\tpchP\t\tGO:0008150\t\tIDA\t\tP\tphosphorylcholine phosphatase\tpcP|phosphochlorylcholine phosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5298\tPA5298\t\tGO:0008940\t\tISS\t\tF\txanthine phosphoribosyltransferase\txpt\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5298\tPA5298\t\tGO:0009117\t\tISS\t\tP\txanthine phosphoribosyltransferase\txpt\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5300\tcycB\t\tGO:0006091\t\tISS\t\tP\tcytochrome c5\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5301\tpauR\t\tGO:0006598\t\tIDA\t\tP\tPauR\tycjC|pauR|PauR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5302\tdadX\t\tGO:0004056\t\tISS\t\tF\tcatabolic alanine racemase\talr2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5302\tdadX\t\tGO:0006520\t\tISS\t\tP\tcatabolic alanine racemase\talr2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5302\tdadX\t\tGO:0006531\t\tISS\t\tP\tcatabolic alanine racemase\talr2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5302\tdadX\t\tGO:0046436\t\tISS\t\tP\tcatabolic alanine racemase\talr2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5304\tdadA\t\tGO:0004795\t\tIDA\t\tF\tD-amino acid dehydrogenase, small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5304\tdadA\t\tGO:0006091\t\tISS\t\tP\tD-amino acid dehydrogenase, small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5304\tdadA\t\tGO:0006520\t\tISS\t\tP\tD-amino acid dehydrogenase, small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5304\tdadA\t\tGO:0006558\t\tISS\t\tP\tD-amino acid dehydrogenase, small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5304\tdadA\t\tGO:0006807\t\tISS\t\tP\tD-amino acid dehydrogenase, small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5309\tpauB4\t\tGO:0006598\t\tISS\t\tP\tFAD-dependent oxidoreductase\tFAD-dependent oxidoreductase|pauB4\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5313\tgabT2\t\tGO:0006598\t\tISS\t\tP\tTransaminase\tpaaT|Transaminase|gabT2\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5322\talgC\t\tGO:0006520\t\tIDA\t\tP\tphosphomannomutase AlgC\tpmm\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5322\talgC\t\tGO:0009276\t\tIDA\t\tC\tphosphomannomutase AlgC\tpmm\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5323\targB\t\tGO:0004516\t\tISS\t\tF\tacetylglutamate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5323\targB\t\tGO:0006520\t\tISS\t\tP\tacetylglutamate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5323\targB\t\tGO:0006525\t\tISS\t\tP\tacetylglutamate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5323\targB\t\tGO:0006560\t\tISS\t\tP\tacetylglutamate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5324\tsphR\t\tGO:0051872\t\tIDA\t\tP\tSphingosine-responsive Regulator, SphR\tSphingosine-responsive Regulator, SphR|sphR\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5325\tsphA\t\tGO:0051872\t\tIDA\t\tP\tSphA\tSphA|sphA\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5326\tsphD\t\tGO:0051872\t\tIMP\t\tP\tSphD\tSphD|sphD\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5327\tsphC\t\tGO:0051872\t\tIDA\t\tP\tSphC\tSphC|sphC\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5328\tsphB\t\tGO:0051872\t\tIDA\t\tP\tSphB\tSphB|sphB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5332\tcrc\t\tGO:0006091\t\tIDA\t\tP\tcatabolite repression control protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5332\tcrc\t\tGO:0015976\t\tIDA\t\tP\tcatabolite repression control protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5332\tcrc\t\tGO:0044248\t\tIDA\t\tP\tcatabolite repression control protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5334\trph\t\tGO:0016070\t\tISS\t\tP\tribonuclease PH\ttRNA nucleotidyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5336\tgmk\t\tGO:0004789\t\tISS\t\tF\tguanylate kinase\tGMP kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5336\tgmk\t\tGO:0009117\t\tISS\t\tP\tguanylate kinase\tGMP kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5337\trpoZ\t\tGO:0016070\t\tISS\t\tP\tRNA polymerase omega subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5337\trpoZ\t\tGO:0046316\t\tISS\t\tF\tRNA polymerase omega subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5338\tspoT\t\tGO:0006163\t\tISS\t\tP\tguanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase\t(p)ppGpp synthetase II\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5338\tspoT\t\tGO:0008882\t\tISS\t\tF\tguanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase\t(p)ppGpp synthetase II\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5338\tspoT\t\tGO:0009117\t\tISS\t\tP\tguanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase\t(p)ppGpp synthetase II\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5338\tspoT\t\tGO:0050896\t\tISS\t\tP\tguanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase\t(p)ppGpp synthetase II\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5353\tglcF\t\tGO:0008152\t\tISS\t\tP\tglycolate oxidase subunit GlcF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5353\tglcF\t\tGO:0015976\t\tISS\t\tP\tglycolate oxidase subunit GlcF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5353\tglcF\t\tGO:0044248\t\tISS\t\tP\tglycolate oxidase subunit GlcF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5354\tglcE\t\tGO:0008152\t\tISS\t\tP\tglycolate oxidase subunit GlcE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5354\tglcE\t\tGO:0015976\t\tISS\t\tP\tglycolate oxidase subunit GlcE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5354\tglcE\t\tGO:0044248\t\tISS\t\tP\tglycolate oxidase subunit GlcE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5355\tglcD\t\tGO:0008152\t\tISS\t\tP\tglycolate oxidase subunit GlcD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5355\tglcD\t\tGO:0015976\t\tISS\t\tP\tglycolate oxidase subunit GlcD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5355\tglcD\t\tGO:0044248\t\tISS\t\tP\tglycolate oxidase subunit GlcD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5356\tglcC\t\tGO:0006355\t\tISS\t\tP\ttranscriptional regulator GlcC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5358\tubiA\t\tGO:0006091\t\tISS\t\tP\t4-hydroxybenzoate-octaprenyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5358\tubiA\t\tGO:0009019\t\tISS\t\tF\t4-hydroxybenzoate-octaprenyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5358\tubiA\t\tGO:0051188\t\tISS\t\tP\t4-hydroxybenzoate-octaprenyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5361\tphoR\t\tGO:0000160\t\tISS\t\tP\ttwo-component sensor PhoR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5366\tpstB\t\tGO:0006810\t\tIDA\t\tP\tATP-binding component of ABC phosphate transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5366\tpstB\t\tGO:0016020\t\tIDA\t\tC\tATP-binding component of ABC phosphate transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5367\tpstA\t\tGO:0006810\t\tIDA\t\tP\tmembrane protein component of ABC phosphate transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5367\tpstA\t\tGO:0016020\t\tIDA\t\tC\tmembrane protein component of ABC phosphate transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5368\tpstC\t\tGO:0006810\t\tIDA\t\tP\tmembrane protein component of ABC phosphate transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5368\tpstC\t\tGO:0016020\t\tIDA\t\tC\tmembrane protein component of ABC phosphate transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5372\tbetA\t\tGO:0006520\t\tISS\t\tP\tcholine dehydrogenase\tbetA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5372\tbetA\t\tGO:0050896\t\tISS\t\tP\tcholine dehydrogenase\tbetA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5373\tbetB\t\tGO:0006520\t\tISS\t\tP\tbetaine aldehyde dehydrogenase\tbetB protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5373\tbetB\t\tGO:0050896\t\tISS\t\tP\tbetaine aldehyde dehydrogenase\tbetB protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5375\tbetT1\t\tGO:0006810\t\tISS\t\tP\tBetT1\tBetT1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5375\tbetT1\t\tGO:0016020\t\tISS\t\tC\tBetT1\tBetT1\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5413\tltaA\t\tGO:0006520\t\tISS\t\tP\tlow specificity l-threonine aldolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5413\tltaA\t\tGO:0006544\t\tISS\t\tP\tlow specificity l-threonine aldolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5413\tltaA\t\tGO:0006563\t\tISS\t\tP\tlow specificity l-threonine aldolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5413\tltaA\t\tGO:0006566\t\tISS\t\tP\tlow specificity l-threonine aldolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5415\tglyA1\t\tGO:0006520\t\tISS\t\tP\tserine hydroxymethyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5421\tfdhA\t\tGO:0008152\t\tISS\t\tP\tglutathione-independent formaldehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5421\tfdhA\t\tGO:0015947\t\tISS\t\tP\tglutathione-independent formaldehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5421\tfdhA\t\tGO:0016990\t\tIDA\t\tF\tglutathione-independent formaldehyde dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5425\tpurK\t\tGO:0004157\t\tISS\t\tF\tphosphoribosylaminoimidazole carboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5425\tpurK\t\tGO:0006163\t\tIDA\t\tP\tphosphoribosylaminoimidazole carboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5425\tpurK\t\tGO:0009117\t\tIDA\t\tP\tphosphoribosylaminoimidazole carboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5426\tpurE\t\tGO:0004151\t\tISS\t\tF\tphosphoribosylaminoimidazole carboxylase, catalytic subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5426\tpurE\t\tGO:0006163\t\tIDA\t\tP\tphosphoribosylaminoimidazole carboxylase, catalytic subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5426\tpurE\t\tGO:0009117\t\tIDA\t\tP\tphosphoribosylaminoimidazole carboxylase, catalytic subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5427\tadhA\t\tGO:0004345\t\tIDA\t\tF\talcohol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5427\tadhA\t\tGO:0006091\t\tISS\t\tP\talcohol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5427\tadhA\t\tGO:0006094\t\tISS\t\tP\talcohol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5427\tadhA\t\tGO:0006096\t\tISS\t\tP\talcohol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5427\tadhA\t\tGO:0006570\t\tISS\t\tP\talcohol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5427\tadhA\t\tGO:0006631\t\tISS\t\tP\talcohol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5427\tadhA\t\tGO:0015976\t\tISS\t\tP\talcohol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5427\tadhA\t\tGO:0044248\t\tISS\t\tP\talcohol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5427\tadhA\t\tGO:0046486\t\tISS\t\tP\talcohol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5429\taspA\t\tGO:0003994\t\tISS\t\tF\taspartate ammonia-lyase\taspartase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5429\taspA\t\tGO:0006522\t\tISS\t\tP\taspartate ammonia-lyase\taspartase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5429\taspA\t\tGO:0006531\t\tISS\t\tP\taspartate ammonia-lyase\taspartase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5429\taspA\t\tGO:0006807\t\tISS\t\tP\taspartate ammonia-lyase\taspartase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5476\tcitA\t\tGO:0006810\t\tISS\t\tP\tcitrate transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5476\tcitA\t\tGO:0016020\t\tISS\t\tC\tcitrate transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5479\tgltP\t\tGO:0006810\t\tISS\t\tP\tproton-glutamate symporter\tglutamate-aspartate symporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5479\tgltP\t\tGO:0016020\t\tISS\t\tC\tproton-glutamate symporter\tglutamate-aspartate symporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5489\tdsbA\t\tGO:0006457\t\tISS\t\tP\tthiol:disulfide interchange protein DsbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5489\tdsbA\t\tGO:0044267\t\tISS\t\tP\tthiol:disulfide interchange protein DsbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5508\tpauA7\t\tGO:0006598\t\tIDA\t\tP\tGlutamylpolyamine synthetase homologue\tGlutamylpolyamine synthetase homologue|pauA7\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5516\tpdxY\t\tGO:0008710\t\tISS\t\tF\tpyridoxamine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5516\tpdxY\t\tGO:0051188\t\tISS\t\tP\tpyridoxamine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5522\tpauA6\t\tGO:0006598\t\tIDA\t\tP\tGlutamylpolyamine synthetase\tGlutamylpolyamine synthetase|pauA6\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5538\tamiA\t\tGO:0009276\t\tISS\t\tC\tN-acetylmuramoyl-L-alanine amidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5550\tglmR\t\tGO:0006355\t\tIDA\t\tP\tGlmR transcriptional regulator\tglmR|GlmR transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5563\tsoj\t\tGO:0043093\t\tISS\t\tP\tchromosome partitioning protein Soj\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0008\tglyS\t\tGO:0006520\t\tISS\t\tP\tglycyl-tRNA synthetase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0008\tglyS\t\tGO:0044267\t\tISS\t\tP\tglycyl-tRNA synthetase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0009\tglyQ\t\tGO:0006520\t\tISS\t\tP\tglycyl-tRNA synthetase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0009\tglyQ\t\tGO:0044267\t\tISS\t\tP\tglycyl-tRNA synthetase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0016\ttrkA\t\tGO:0006810\t\tISS\t\tP\tpotassium uptake protein TrkA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0019\tdef\t\tGO:0044267\t\tISS\t\tP\tpolypeptide deformylase\tformylmethionine deformylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0023\tqor\t\tGO:0004459\t\tISS\t\tF\tquinone oxidoreductase\tNADPH:quinone reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0023\tqor\t\tGO:0006091\t\tISS\t\tP\tquinone oxidoreductase\tNADPH:quinone reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0024\themF\t\tGO:0015994\t\tISS\t\tP\tcoproporphyrinogen III oxidase, aerobic\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0024\themF\t\tGO:0051188\t\tISS\t\tP\tcoproporphyrinogen III oxidase, aerobic\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0009276\t\tISS\t\tC\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0015976\t\tISS\t\tP\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0044248\t\tISS\t\tP\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP",
                "type": "Invalid identifier",
                "message": "reference column 6 is empty",
                "obj": "EMPTY",
                "taxon": "taxon:208964",
                "rule": 1
            }
        ],
        "gorule-0000059": [
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0026\tplcB\t\tGO:0004629\tPMID:15306013\tIDA\t\tF\tphospholipase C, PlcB\tplcB|phospholipase C, PlcB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0026\tplcB\t\tGO:0006935\tPMID:15306013\tIDA\t\tP\tphospholipase C, PlcB\tplcB|phospholipase C, PlcB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0026\tplcB\t\tGO:0015628\tPMID:15306013\tIDA\t\tP\tphospholipase C, PlcB\tplcB|phospholipase C, PlcB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0026\tplcB\t\tGO:0043952\tPMID:15306013\tIDA\t\tP\tphospholipase C, PlcB\tplcB|phospholipase C, PlcB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0026\tplcB\t\tGO:0016298\tPMID:15306013\tIDA\t\tF\tphospholipase C, PlcB\tplcB|phospholipase C, PlcB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0030\tcosX\t\tGO:0042425\tPMID:23763788\tISS\tUniProtKB:Q500S0\tP\tCosX\tCosX|cosX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0030\tcosX\t\tGO:1901682\tPMID:23763788\tISS\tUniProtKB:Q500S0\tF\tCosX\tCosX|cosX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0030\tcosX\t\tGO:0042597\tPMID:23763788\tISS\tUniProtKB:Q500S0\tC\tCosX\tCosX|cosX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0030\tcosX\t\tGO:0043190\tPMID:23763788\tISS\tUniProtKB:Q500S0\tC\tCosX\tCosX|cosX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0035\ttrpA\t\tGO:0000162\tPMID:3127651\tIDA\t\tP\ttryptophan synthase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0035\ttrpA\t\tGO:0000162\tPMID:3127651\tNAS\t\tP\ttryptophan synthase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0035\ttrpA\t\tGO:0006520\tPMID:3127651\tISS\t\tP\ttryptophan synthase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0035\ttrpA\t\tGO:0000162\tPMID:3127651\tISS\t\tP\ttryptophan synthase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0035\ttrpA\t\tGO:0004834\tPMID:3127651\tISS\t\tF\ttryptophan synthase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0036\ttrpB\t\tGO:0000162\tPMID:3127651\tNAS\t\tP\ttryptophan synthase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0036\ttrpB\t\tGO:0006520\tPMID:3127651\tISS\t\tP\ttryptophan synthase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0036\ttrpB\t\tGO:0000162\tPMID:3127651\tISS\t\tP\ttryptophan synthase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0036\ttrpB\t\tGO:0004834\tPMID:3127651\tISS\t\tF\ttryptophan synthase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0037\ttrpI\t\tGO:0006355\tPMID:1904858\tIDA\t\tP\ttranscriptional regulator TrpI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0037\ttrpI\t\tGO:2000284\tPMID:1904858\tIMP\t\tP\ttranscriptional regulator TrpI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0074\tppkA\t\tGO:0050714\tPMID:19400797\tIDA\t\tP\tserine/threonine protein kinase PpkA\ttagE1|TagE1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0074\tppkA\t\tGO:0004674\tPMID:9852028\tIDA\t\tF\tserine/threonine protein kinase PpkA\ttagE1|TagE1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0075\tpppA\t\tGO:0050709\tPMID:17558395\tIMP\t\tP\tPppA\tpppA|PppA|tagG1|TagG1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0075\tpppA\t\tGO:0004722\tPMID:17558395\tIDA\t\tF\tPppA\tpppA|PppA|tagG1|TagG1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0082\ttssA1\t\tGO:0033104\tPMID:27288401\tIDA\t\tC\tTssA1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0082\ttssA1\t\tGO:0005515\tPMID:27288401\tIPI\tPseudoCAP:PA0085\tF\tTssA1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0082\ttssA1\t\tGO:0042802\tPMID:27288401\tIPI\tPseudoCAP:PA0082\tF\tTssA1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0091\tvgrG1\t\tGO:0033103\tPMID:21325275\tIMP\t\tP\tVgrG1\tvgrG1|VgrG1|vgrG1a|VgrG1a\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0091\tvgrG1\t\tGO:0033104\tPMID:21325275\tIMP\t\tC\tVgrG1\tvgrG1|VgrG1|vgrG1a|VgrG1a\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0091\tvgrG1\t\tGO:0033103\tPMID:16763151\tIGC\t\tP\tVgrG1\tvgrG1|VgrG1|vgrG1a|VgrG1a\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0091\tvgrG1\t\tGO:0033104\tPMID:16763151\tIGC\t\tC\tVgrG1\tvgrG1|VgrG1|vgrG1a|VgrG1a\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0091\tvgrG1\t\tGO:0033103\tPMID:20114026\tIDA\t\tP\tVgrG1\tvgrG1|VgrG1|vgrG1a|VgrG1a\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0091\tvgrG1\t\tGO:0033104\tPMID:20114026\tIDA\t\tC\tVgrG1\tvgrG1|VgrG1|vgrG1a|VgrG1a\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0092\ttsi6\t\tGO:0033103\tPMID:24589350\tIMP\t\tP\tTsi6\tTsi6|tsi6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0092\ttsi6\t\tGO:0097351\tPMID:24589350\tIMP\t\tF\tTsi6\tTsi6|tsi6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0093\ttse6\t\tGO:0033103\tPMID:24794869\tIMP\t\tP\tTse6\tTse6|tse6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0093\ttse6\t\tGO:0033103\tPMID:24589350\tIDA\t\tP\tTse6\tTse6|tse6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0093\ttse6\t\tGO:0097351\tPMID:24589350\tIMP\t\tF\tTse6\tTse6|tse6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0093\ttse6\t\tGO:0009405\tPMID:24794869\tIMP\t\tP\tTse6\tTse6|tse6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0093\ttse6\t\tGO:0009405\tPMID:24589350\tIDA\t\tP\tTse6\tTse6|tse6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0093\ttse6\t\tGO:0050135\tPMID:26456113\tIDA\t\tF\tTse6\tTse6|tse6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0094\teagT6\t\tGO:0072321\tPMID:26456113\tIDA\t\tP\tEagT6\teagT6|EagT6|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0094\teagT6\t\tGO:0005515\tPMID:26456113\tIPI\tPseudoCAP:PA0091\tF\tEagT6\teagT6|EagT6|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0094\teagT6\t\tGO:0005515\tPMID:26456113\tIPI\tPseudoCAP:PA0092\tF\tEagT6\teagT6|EagT6|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0094\teagT6\t\tGO:0005515\tPMID:26456113\tIPI\tPseudoCAP:PA0093\tF\tEagT6\teagT6|EagT6|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0095\tPA0095\t\tGO:0033103\tPMID:21325275\tIMP\t\tP\tvgrG1b\tvgr|vgrG1b|VgrG1b\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0095\tPA0095\t\tGO:0033104\tPMID:21325275\tIMP\t\tC\tvgrG1b\tvgr|vgrG1b|VgrG1b\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0099\tPA0099\t\tGO:0033103\tPMID:24794869\tIMP\t\tP\ttype VI effector protein\ttype VI effector protein|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0099\tPA0099\t\tGO:0009405\tPMID:24794869\tIMP\t\tP\ttype VI effector protein\ttype VI effector protein|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0102\tPA0102\t\tGO:0004089\tPMID:23728627\tIDA\t\tF\tprobable carbonic anhydrase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0102\tPA0102\t\tGO:0008270\tPMID:23728627\tIDA\t\tF\tprobable carbonic anhydrase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0122\trahU\t\tGO:0051861\tPMID:25926530\tIPI\tPubChem_Compound:162246\tF\trahU\trahU|rahU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0129\tbauD\t\tGO:0019483\tPMID:21622750\tIDA\t\tP\tAmino acid permease\tAmino acid permease|bauD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0130\tbauC\t\tGO:0019483\tPMID:21622750\tIDA\t\tP\t3-Oxopropanoate dehydrogenase\t3-Oxopropanoate dehydrogenase|bauC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0131\tbauB\t\tGO:0019483\tPMID:21622750\tIDA\t\tP\tBauB\tbauB|BauB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0132\tbauA\t\tGO:0019483\tPMID:21622750\tIDA\t\tP\tBeta-alanine:pyruvate transaminase\toapT|omega-amino acid--pyruvate transaminase|Beta-alanine:pyruvate transaminase|bauA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0133\tbauR\t\tGO:0009896\tPMID:21622750\tIMP\t\tP\tBauR\tBauR|bauR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0143\tnuh\t\tGO:0006163\tPMID:15995202\tIMP\t\tP\tpurine nucleosidase Nuh\tnucleoside hydrolase|purine nucleosidase Nuh\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0143\tnuh\t\tGO:0008477\tPMID:15995202\tIMP\t\tF\tpurine nucleosidase Nuh\tnucleoside hydrolase|purine nucleosidase Nuh\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0148\tPA0148\t\tGO:0000034\tPMID:21710971\tIDA\t\tF\tadenine deaminase\tadd|adenine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0149\tPA0149\t\tGO:0016987\tPMID:18086184\tIMP\t\tF\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0149\tPA0149\t\tGO:0010959\tPMID:18086184\tIMP\t\tP\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0149\tPA0149\t\tGO:0005829\tPMID:18086184\tNAS\t\tC\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0150\tPA0150\t\tGO:0016989\tPMID:18086184\tNAS\t\tF\tanti-sigma factor\tanti-sigma factor|probable transmembrane sensor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0151\tPA0151\t\tGO:0038023\tPMID:18086184\tISS\t\tF\tprobable TonB-dependent receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0151\tPA0151\t\tGO:0007166\tPMID:18086184\tNAS\t\tP\tprobable TonB-dependent receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0151\tPA0151\t\tGO:0019867\tPMID:18086184\tIDA\t\tC\tprobable TonB-dependent receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0176\taer2\t\tGO:0009454\tPMID:14987771\tIMP\t\tP\taerotaxis transducer Aer2\tmethyl-accepting chemotaxis protein|aer2|aerotaxis transducer Aer2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0183\tatsA\t\tGO:0004065\tPMID:7744061\tIDA\t\tF\tarylsulfatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0183\tatsA\t\tGO:0008081\tPMID:19554727\tIDA\t\tF\tarylsulfatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0220\tPA0220\t\tGO:0051615\tPMID:18833300\tIMP\t\tP\tamino acid APC family transporter\tamino acid APC family transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0247\tpobA\t\tGO:0018659\tPMID:2465205\tISS\t\tF\tp-hydroxybenzoate hydroxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0247\tpobA\t\tGO:0043639\tPMID:2465205\tISS\t\tP\tp-hydroxybenzoate hydroxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0262\tvgrG2b\t\tGO:0033103\tPMID:21325275\tIGC\t\tP\tVgrG2b\tVgrG2b|vgrG2b\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0262\tvgrG2b\t\tGO:0033104\tPMID:21325275\tIGC\t\tC\tVgrG2b\tVgrG2b|vgrG2b\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0289\tgpuR\t\tGO:0051345\tPMID:16339950\tIDA\t\tP\ttranscriptional activator GpuR\tgpuR|transcriptional activator GpuR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0291\toprE\t\tGO:0015288\tPMID:2120174\tIMP\t\tF\tAnaerobically-induced outer membrane porin OprE precursor\tPorin E1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0291\toprE\t\tGO:0019867\tPMID:2120174\tIDA\t\tC\tAnaerobically-induced outer membrane porin OprE precursor\tPorin E1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0292\taguA\t\tGO:0047632\tPMID:11673419\tIDA\t\tF\tagmatine deiminase\tagmatine iminohydrolase|aguA|agmatine deiminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0292\taguA\t\tGO:0033388\tPMID:6423933\tIMP\t\tP\tagmatine deiminase\tagmatine iminohydrolase|aguA|agmatine deiminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0293\taguB\t\tGO:0050126\tPMID:6423933\tIMP\t\tF\tN-carbamoylputrescine amidohydrolase\tN-carbamoylputrescine amidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0293\taguB\t\tGO:0033388\tPMID:6423933\tIMP\t\tP\tN-carbamoylputrescine amidohydrolase\tN-carbamoylputrescine amidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0294\taguR\t\tGO:0051346\tPMID:11673419\tIMP\t\tP\ttranscriptional regulator AguR\taguR|transcriptional regulator AguR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0296\tspuI\t\tGO:0046203\tPMID:12081945\tIMP\t\tP\tGlutamylpolyamine synthetase\tspuI|Glutamylpolyamine synthetase|pauA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0296\tspuI\t\tGO:0009447\tPMID:12081945\tIMP\t\tP\tGlutamylpolyamine synthetase\tspuI|Glutamylpolyamine synthetase|pauA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0297\tspuA\t\tGO:0046203\tPMID:21622750\tIMP\t\tP\tprobable glutamine amidotransferase\tycjL|spuA|pauD1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0298\tspuB\t\tGO:0046203\tPMID:21622750\tIMP\t\tP\tGlutamylpolyamine synthetase\tspuB|Glutamylpolyamine synthetase|pauA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0299\tspuC\t\tGO:0008483\tPMID:21622750\tIMP\t\tF\tPolyamine:pyruvate transaminase\tspuC|Polyamine:pyruvate transaminase|spuC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0299\tspuC\t\tGO:0009447\tPMID:18192388\tIMP\t\tP\tPolyamine:pyruvate transaminase\tspuC|Polyamine:pyruvate transaminase|spuC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0300\tspuD\t\tGO:0019810\tPMID:22300763\tIDA\t\tF\tpolyamine transport protein\tpotF2|spuD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0300\tspuD\t\tGO:0015846\tPMID:12081945\tIMP\t\tP\tpolyamine transport protein\tpotF2|spuD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0301\tspuE\t\tGO:0019809\tPMID:22300763\tIDA\t\tF\tpolyamine transport protein\tpotF3|spuE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0301\tspuE\t\tGO:0015846\tPMID:12081945\tIMP\t\tP\tpolyamine transport protein\tpotF3|spuE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0301\tspuE\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tpolyamine transport protein\tpotF3|spuE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0302\tspuF\t\tGO:0015848\tPMID:12081945\tIMP\t\tP\tpolyamine transport protein PotG\tpotG|spuF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0302\tspuF\t\tGO:0015847\tPMID:12081945\tIMP\t\tP\tpolyamine transport protein PotG\tpotG|spuF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0303\tspuG\t\tGO:0015848\tPMID:12081945\tIMP\t\tP\tpolyamine transport protein PotH\tpotH|spuG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0303\tspuG\t\tGO:0015847\tPMID:12081945\tIMP\t\tP\tpolyamine transport protein PotH\tpotH|spuG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0304\tspuH\t\tGO:0015848\tPMID:12081945\tIMP\t\tP\tpolyamine transport protein PotI\tpotI|spuH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0304\tspuH\t\tGO:0015847\tPMID:12081945\tIMP\t\tP\tpolyamine transport protein PotI\tpotI|spuH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0305\thacB\t\tGO:0016811\tPMID:21372094\tIDA\t\tF\tacylhomoserine lactone acylase B\tacylhomoserine lactone acylase B|hacB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0317\tPA0317\t\tGO:0051990\tPMID:28827360\tIMP\t\tF\tD-2-hydroxyglutarate dehydrogenase\tD-2-hydroxyglutarate dehydrogenase|hypothetical protein|D2HGDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0317\tPA0317\t\tGO:0006564\tPMID:28827360\tIMP\t\tP\tD-2-hydroxyglutarate dehydrogenase\tD-2-hydroxyglutarate dehydrogenase|hypothetical protein|D2HGDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0317\tPA0317\t\tGO:0006564\tPMID:28827360\tIGI\t\tP\tD-2-hydroxyglutarate dehydrogenase\tD-2-hydroxyglutarate dehydrogenase|hypothetical protein|D2HGDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0320\tcarO\t\tGO:0046689\tPMID:22990488\tIMP\t\tP\tcalcium-regulated OB-fold protein CarO\tYgiW|ygiW|carO|calcium-regulated OB-fold protein CarO\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0320\tcarO\t\tGO:0046686\tPMID:22990488\tIMP\t\tP\tcalcium-regulated OB-fold protein CarO\tYgiW|ygiW|carO|calcium-regulated OB-fold protein CarO\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0320\tcarO\t\tGO:0046677\tPMID:22990488\tIMP\t\tP\tcalcium-regulated OB-fold protein CarO\tYgiW|ygiW|carO|calcium-regulated OB-fold protein CarO\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0321\tPA0321\t\tGO:0006595\tPMID:26956223\tIDA\t\tP\tacetylpolyamine amidohydrolase\tacetylpolyamine amidohydrolase|probable acetylpolyamine aminohydrolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0321\tPA0321\t\tGO:0016787\tPMID:26956223\tIDA\t\tF\tacetylpolyamine amidohydrolase\tacetylpolyamine amidohydrolase|probable acetylpolyamine aminohydrolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0328\taaaA\t\tGO:0004177\tPMID:22927813\tIMP\t\tF\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA|aaaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0328\taaaA\t\tGO:0009405\tPMID:22927813\tIMP\t\tP\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA|aaaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0328\taaaA\t\tGO:0048870\tPMID:22927813\tIDA\t\tP\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA|aaaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0328\taaaA\t\tGO:0019867\tPMID:22927813\tIGI\t\tC\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA|aaaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0328\taaaA\t\tGO:0015474\tPMID:22927813\tIDA\t\tF\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA|aaaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0336\trppH\t\tGO:0034353\tPMID:28833678\tIMP\t\tF\tRNA pyrophosphohydrolase, RppH\tdinucleoside oligophosphate pyrophosphatase|ygdP|Nudix hydrolase YgdP|Nudix hydrolase YgdP|ygdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0355\tpfpI\t\tGO:0071978\tPMID:22123702\tIMP\t\tP\tprotease PfpI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0355\tpfpI\t\tGO:0071236\tPMID:22123702\tIMP\t\tP\tprotease PfpI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0355\tpfpI\t\tGO:0044010\tPMID:22123702\tIMP\t\tP\tprotease PfpI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0355\tpfpI\t\tGO:0044011\tPMID:22123702\tIMP\t\tP\tprotease PfpI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0357\tmutM\t\tGO:0016787\tPMID:12445642\tIDA\t\tF\tformamidopyrimidine-DNA glycosylase\tfpg|mutY|mutM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0357\tmutM\t\tGO:0006281\tPMID:12445642\tIDA\t\tP\tformamidopyrimidine-DNA glycosylase\tfpg|mutY|mutM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0357\tmutM\t\tGO:0006281\tPMID:12445642\tIGI\t\tP\tformamidopyrimidine-DNA glycosylase\tfpg|mutY|mutM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0372\tPA0372\t\tGO:0018189\tPMID:21262231\tISS\tUniProtKB:E9RGH7\tP\tprobable zinc protease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0372\tPA0372\t\tGO:0008237\tPMID:21262231\tISS\tUniProtKB:E9RGH7\tF\tprobable zinc protease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0372\tPA0372\t\tGO:0019867\tPMID:21262231\tISS\tUniProtKB:E9RGH7\tC\tprobable zinc protease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0376\trpoH\t\tGO:0006355\tPMID:7698670\tISS\t\tP\tsigma factor RpoH\theat-shock sigma factor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0378\tPA0378\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT51\tF\tprobable transglycosylase\tmgtA|monofunctional biosynthetic peptidoglycan transglycosylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0393\tproC\t\tGO:0004735\tPMID:8479442\tTAS\t\tF\tpyrroline-5-carboxylate reductase\tdelta-1-pyrroline-5-carboxylate reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0393\tproC\t\tGO:0006561\tPMID:8479442\tTAS\t\tP\tpyrroline-5-carboxylate reductase\tdelta-1-pyrroline-5-carboxylate reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0395\tpilT\t\tGO:0044096\tPMID:20595000\tTAS\t\tC\ttwitching motility protein PilT\ttype 4 fimbrial biogenesis protein PilT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0395\tpilT\t\tGO:0043108\tPMID:20595000\tTAS\t\tP\ttwitching motility protein PilT\ttype 4 fimbrial biogenesis protein PilT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0395\tpilT\t\tGO:0043107\tPMID:20595000\tTAS\t\tP\ttwitching motility protein PilT\ttype 4 fimbrial biogenesis protein PilT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0395\tpilT\t\tGO:0016887\tPMID:18174131\tIDA\t\tF\ttwitching motility protein PilT\ttype 4 fimbrial biogenesis protein PilT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0396\tpilU\t\tGO:0043107\tPMID:7854122\tIMP\t\tP\ttwitching motility protein PilU\ttype 4 fimbrial biogenesis protein PilU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0396\tpilU\t\tGO:0016888\tPMID:18174131\tIDA\t\tF\ttwitching motility protein PilU\ttype 4 fimbrial biogenesis protein PilU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0423\tpasP\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tPasP\tyceI|pasP|PasP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0424\tmexR\t\tGO:0045892\tPMID:10671465\tIMP\t\tP\tmultidrug resistance operon repressor MexR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0424\tmexR\t\tGO:0044212\tPMID:11208776\tIDA\t\tF\tmultidrug resistance operon repressor MexR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0424\tmexR\t\tGO:0034763\tPMID:8878574\tIMP\t\tP\tmultidrug resistance operon repressor MexR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0424\tmexR\t\tGO:0050709\tPMID:8878574\tIMP\t\tP\tmultidrug resistance operon repressor MexR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0424\tmexR\t\tGO:0045892\tPMID:10671465\tIMP\t\tP\tmultidrug resistance operon repressor MexR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0424\tmexR\t\tGO:0034763\tPMID:8878574\tIMP\t\tP\tmultidrug resistance operon repressor MexR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0425\tmexA\t\tGO:0015238\tPMID:8540696\tIMP\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexA precursor\tRND multidrug efflux membrane fusion protein MexA precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0425\tmexA\t\tGO:0046677\tPMID:8540696\tIDA\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexA precursor\tRND multidrug efflux membrane fusion protein MexA precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0425\tmexA\t\tGO:0015238\tPMID:8540696\tIMP\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexA precursor\tRND multidrug efflux membrane fusion protein MexA precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0426\tmexB\t\tGO:0015238\tPMID:8540696\tIGC\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexB\tRND multidrug efflux transporter MexB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0427\toprM\t\tGO:0015238\tPMID:8540696\tIMP\t\tF\tMajor intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0428\tPA0428\t\tGO:0071978\tPMID:17158671\tIMP\t\tP\tprobable ATP-dependent RNA helicase\trhlE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0428\tPA0428\t\tGO:0044010\tPMID:17158671\tIMP\t\tP\tprobable ATP-dependent RNA helicase\trhlE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0448\tgcdR\t\tGO:0043565\tPMID:26967762\tIDA\t\tF\ttranscriptional regulator, GcdR\tgcdR|transcriptional regulator, GcdR|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0470\tfiuA\t\tGO:0042928\tPMID:20047910\tIMP\t\tP\tFerrichrome receptor FiuA\tfiuA|Ferrichrome receptor FiuA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0470\tfiuA\t\tGO:0042929\tPMID:20047910\tIMP\t\tF\tFerrichrome receptor FiuA\tfiuA|Ferrichrome receptor FiuA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0470\tfiuA\t\tGO:0042929\tPMID:16484199\tIMP\t\tF\tFerrichrome receptor FiuA\tfiuA|Ferrichrome receptor FiuA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0470\tfiuA\t\tGO:0038023\tPMID:16484199\tIMP\t\tF\tFerrichrome receptor FiuA\tfiuA|Ferrichrome receptor FiuA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0470\tfiuA\t\tGO:0042928\tPMID:16484199\tIMP\t\tP\tFerrichrome receptor FiuA\tfiuA|Ferrichrome receptor FiuA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0470\tfiuA\t\tGO:0007166\tPMID:16484199\tIMP\t\tP\tFerrichrome receptor FiuA\tfiuA|Ferrichrome receptor FiuA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0470\tfiuA\t\tGO:0019867\tPMID:16484199\tIDA\t\tC\tFerrichrome receptor FiuA\tfiuA|Ferrichrome receptor FiuA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0471\tfiuR\t\tGO:0016989\tPMID:16484199\tIMP\t\tF\tFiuR\tfiuR|FiuR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0471\tfiuR\t\tGO:0034756\tPMID:16484199\tIMP\t\tP\tFiuR\tfiuR|FiuR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0471\tfiuR\t\tGO:0005886\tPMID:16484199\tISS\t\tC\tFiuR\tfiuR|FiuR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0472\tfiuI\t\tGO:0016987\tPMID:16484199\tIMP\t\tF\tFiuI\tfiuI|FiuI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0472\tfiuI\t\tGO:0034756\tPMID:16484199\tIMP\t\tP\tFiuI\tfiuI|FiuI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0509\tnirN\t\tGO:0006783\tPMID:25204657\tIDA\t\tP\tNirN\tNirN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0510\tnirE\t\tGO:0009108\tPMID:19754882\tIMP\t\tP\tNirE\tnirE|NirE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0510\tnirE\t\tGO:0009061\tPMID:8982003\tIMP\t\tP\tNirE\tnirE|NirE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0510\tnirE\t\tGO:0006783\tPMID:8982003\tIMP\t\tP\tNirE\tnirE|NirE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0510\tnirE\t\tGO:0008168\tPMID:19754882\tIDA\t\tF\tNirE\tnirE|NirE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0511\tnirJ\t\tGO:0006783\tPMID:8982003\tIMP\t\tP\theme d1 biosynthesis protein NirJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0512\tnirH\t\tGO:0009108\tPMID:8982003\tIMP\t\tP\tNirH\tnirH|NirH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0512\tnirH\t\tGO:0006783\tPMID:8982003\tIMP\t\tP\tNirH\tnirH|NirH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0513\tnirG\t\tGO:0009108\tPMID:8982003\tIMP\t\tP\tNirG\tnirG|NirG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0513\tnirG\t\tGO:0006783\tPMID:8982003\tIMP\t\tP\tNirG\tnirG|NirG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0514\tnirL\t\tGO:0006783\tPMID:8982003\tIMP\t\tP\theme d1 biosynthesis protein NirL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0519\tnirS\t\tGO:0050421\tPMID:14711008\tTAS\t\tF\tnitrite reductase precursor\tcytochrome oxidase|cytochrome cd1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0527\tdnr\t\tGO:0051173\tPMID:20553552\tIMP\t\tP\ttranscriptional regulator Dnr\tdissimilative nitrate respiration regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0527\tdnr\t\tGO:0051353\tPMID:9767567\tIMP\t\tP\ttranscriptional regulator Dnr\tdissimilative nitrate respiration regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0527\tdnr\t\tGO:0071731\tPMID:7664887\tIMP\t\tP\ttranscriptional regulator Dnr\tdissimilative nitrate respiration regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0538\tdsbB\t\tGO:0055114\tPMID:24327342\tIMP\t\tP\tdisulfide bond formation protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0538\tdsbB\t\tGO:0006457\tPMID:24327342\tIMP\t\tP\tdisulfide bond formation protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0572\tPA0572\t\tGO:0015628\tPMID:20947426\tIDA\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0572\tPA0572\t\tGO:0043952\tPMID:20947426\tIDA\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0572\tPA0572\t\tGO:0052051\tPMID:22309196\tIDA\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0576\trpoD\t\tGO:0016987\tPMID:1902749\tISS\t\tF\tsigma factor RpoD\trpoDA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0595\tlptD\t\tGO:0015921\tPMID:20167788\tIDA\t\tP\tLPS-assembly protein LptD\timp|lptD|ostA|LPS-assembly protein LptD|organic solvent tolerance protein OstA precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0595\tlptD\t\tGO:0015921\tPMID:25735820\tIDA\t\tP\tLPS-assembly protein LptD\timp|lptD|ostA|LPS-assembly protein LptD|organic solvent tolerance protein OstA precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0595\tlptD\t\tGO:0032885\tPMID:29923820\tIDA\t\tP\tLPS-assembly protein LptD\timp|lptD|ostA|LPS-assembly protein LptD|organic solvent tolerance protein OstA precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0609\ttrpE\t\tGO:0004049\tPMID:2153661\tIMP\t\tF\tanthranilate synthetase component I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0609\ttrpE\t\tGO:0000162\tPMID:2153661\tIMP\t\tP\tanthranilate synthetase component I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0610\tprtN\t\tGO:1900378\tPMID:8444788\tIMP\t\tP\ttranscriptional regulator PrtN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0611\tprtR\t\tGO:1900377\tPMID:8444788\tIMP\t\tP\ttranscriptional regulator PrtR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0612\tptrB\t\tGO:1900378\tPMID:16109947\tIMP\t\tP\trepressor, PtrB\tptrB| New product name: repressor, PtrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0612\tptrB\t\tGO:0031328\tPMID:18227247\tIMP\t\tP\trepressor, PtrB\tptrB| New product name: repressor, PtrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0649\ttrpG\t\tGO:0004049\tPMID:2153661\tIMP\t\tF\tanthranilate synthase component II\tpabA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0649\ttrpG\t\tGO:0000162\tPMID:2153661\tIMP\t\tP\tanthranilate synthase component II\tpabA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0651\ttrpC\t\tGO:0004425\tPMID:22555873\tIDA\t\tF\tindole-3-glycerol-phosphate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0651\ttrpC\t\tGO:0000162\tPMID:22555873\tIMP\t\tP\tindole-3-glycerol-phosphate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0652\tvfr\t\tGO:0043902\tPMID:9190808\tIMP\t\tP\ttranscriptional regulator Vfr\tcyclic AMP receptor-like protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0652\tvfr\t\tGO:0009405\tPMID:14977975\tIMP\t\tP\ttranscriptional regulator Vfr\tcyclic AMP receptor-like protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0672\themO\t\tGO:0006788\tPMID:22493498\tIMP\t\tP\theme oxygenase\tpigA|hemO|heme oxygenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0674\tvreA\t\tGO:0038023\tPMID:19730690\tISA\tPDB:2O5P\tF\tVreA\tpigC|vreA|VreA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0674\tvreA\t\tGO:0042597\tPMID:19730690\tIDA\t\tC\tVreA\tpigC|vreA|VreA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0675\tvreI\t\tGO:0016987\tPMID:19730690\tIMP\t\tF\tECF sigma factor, VreI\tvreI|ECF sigma factor, VreI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0675\tvreI\t\tGO:0009405\tPMID:19730690\tIMP\t\tP\tECF sigma factor, VreI\tvreI|ECF sigma factor, VreI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0675\tvreI\t\tGO:0005829\tPMID:19730690\tNAS\t\tC\tECF sigma factor, VreI\tvreI|ECF sigma factor, VreI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0676\tvreR\t\tGO:0016989\tPMID:19730690\tIMP\t\tF\tsigma factor regulator, VreR\tvreR|sigma factor regulator, VreR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0676\tvreR\t\tGO:0005886\tPMID:19730690\tISS\t\tC\tsigma factor regulator, VreR\tvreR|sigma factor regulator, VreR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0677\thxcW\t\tGO:0015627\tPMID:11985723\tISS\tPseudoCAP:PA3098\tC\tHxcW\thxcW|HxcW|HxcW putative pseudopilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0678\thxcU\t\tGO:0015627\tPMID:11985723\tISS\t\tC\tHxcU\thxcU|HxcU|HxcU putative pseudopilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0679\thxcP\t\tGO:0015627\tPMID:11985723\tISS\t\tC\tHxcP\thxcP|HxcP|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0680\thxcV\t\tGO:0015627\tPMID:11985723\tISS\tPseudoCAP:PA3099\tC\tHxcV\thxcV|HxcV|HxcV putative pseudopilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0681\thxcT\t\tGO:0015627\tPMID:21586577\tIDA\t\tC\tHxcT\thxcT|HxcT|HxcT pseudopilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0682\thxcX\t\tGO:0015627\tPMID:11985723\tISS\tPseudoCAP:PA3097\tC\tHxcX\thxcX|HxcX|HxcX atypical pseudopilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0683\thxcY\t\tGO:0015627\tPMID:11985723\tISS\t\tC\tHxcY\thxcY|HxcY|probable type II secretion system protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0684\thxcZ\t\tGO:0015627\tPMID:11985723\tISS\t\tC\tHxcZ\thxcZ|HxcZ|probable type II secretion system protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0685\thxcQ\t\tGO:0015627\tPMID:19815547\tIDA\t\tC\tHxcQ\thxcQ|HxcQ|probable type II secretion system protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0686\thxcR\t\tGO:0015627\tPMID:11985723\tIMP\t\tC\tHxcR\thxcR|HxcR|probable type II secretion system protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0687\thxcS\t\tGO:0015627\tPMID:11985723\tISS\t\tC\tHxcS\thxcS|HxcS|probable type II secretion system protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0688\tlapA\t\tGO:0015628\tPMID:11985723\tIDA\t\tP\tlow-molecular-weight alkaline phosphatase A, LapA\tlapA|low-molecular-weight alkaline phosphatase A, LapA|probable binding protein component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0688\tlapA\t\tGO:0043952\tPMID:11985723\tIDA\t\tP\tlow-molecular-weight alkaline phosphatase A, LapA\tlapA|low-molecular-weight alkaline phosphatase A, LapA|probable binding protein component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0689\tlapB\t\tGO:0015628\tPMID:22835944\tIDA\t\tP\tlow-molecular-weight alkaline phosphatase B, LapB\tlapB|low-molecular-weight alkaline phosphatase B, LapB|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0689\tlapB\t\tGO:0043952\tPMID:22835944\tIDA\t\tP\tlow-molecular-weight alkaline phosphatase B, LapB\tlapB|low-molecular-weight alkaline phosphatase B, LapB|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0690\tpdtA\t\tGO:0046819\tPMID:25009238\tIMP\t\tP\tphosphate depletion regulated TPS partner A, PdtA\tPdtA|pdtA|phosphate depletion regulated TPS partner A, PdtA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0690\tpdtA\t\tGO:0009405\tPMID:25009238\tIMP\t\tP\tphosphate depletion regulated TPS partner A, PdtA\tPdtA|pdtA|phosphate depletion regulated TPS partner A, PdtA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0690\tpdtA\t\tGO:0098046\tPMID:25009238\tIDA\t\tC\tphosphate depletion regulated TPS partner A, PdtA\tPdtA|pdtA|phosphate depletion regulated TPS partner A, PdtA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0691\tphdA\t\tGO:0097351\tPMID:21696457\tISS\tPseudoCAP:PFL_2819\tF\tprevent-host-death protein A\tPhdA|phdA|prevent-host-death protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0691\tphdA\t\tGO:0044010\tPMID:21696457\tIMP\t\tP\tprevent-host-death protein A\tPhdA|phdA|prevent-host-death protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0691\tphdA\t\tGO:0008219\tPMID:21696457\tIMP\t\tP\tprevent-host-death protein A\tPhdA|phdA|prevent-host-death protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0692\tpdtB\t\tGO:0046819\tPMID:25009238\tIMP\t\tP\tphosphate depletion regulated TPS partner B, PdtB\tPdtB|pdtB|phosphate depletion regulated TPS partner B, PdtB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0692\tpdtB\t\tGO:0098046\tPMID:25009238\tIMP\t\tC\tphosphate depletion regulated TPS partner B, PdtB\tPdtB|pdtB|phosphate depletion regulated TPS partner B, PdtB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0705\tmigA\t\tGO:0016757\tPMID:18178733\tIDA\t\tF\talpha-1,6-rhamnosyltransferase MigA\tmigA|alpha-1,6-rhamnosyltransferase MigA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0705\tmigA\t\tGO:0009244\tPMID:18178733\tIMP\t\tP\talpha-1,6-rhamnosyltransferase MigA\tmigA|alpha-1,6-rhamnosyltransferase MigA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0705\tmigA\t\tGO:0015920\tPMID:19589832\tIDA\t\tP\talpha-1,6-rhamnosyltransferase MigA\tmigA|alpha-1,6-rhamnosyltransferase MigA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0705\tmigA\t\tGO:0044010\tPMID:19717596\tIDA\t\tP\talpha-1,6-rhamnosyltransferase MigA\tmigA|alpha-1,6-rhamnosyltransferase MigA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0705\tmigA\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\talpha-1,6-rhamnosyltransferase MigA\tmigA|alpha-1,6-rhamnosyltransferase MigA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0707\ttoxR\t\tGO:0045893\tPMID:3031589\tIDA\t\tP\ttranscriptional regulator ToxR\tregA|transcriptional regulator RegA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0732\tPA0732\t\tGO:0071972\tPMID:23062283\tISS\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0732\tPA0732\t\tGO:0008234\tPMID:23062283\tISS\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0745\tdspI\t\tGO:0098786\tPMID:23935049\tISS\tPseudoCAP:PA14_54640\tP\tDspI\tdspI|DspI|probable enoyl-CoA hydratase/isomerase|dispersion inducer\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:1902201\tPMID:16291668\tIMP\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:0032885\tPMID:14645293\tIMP\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:0016987\tPMID:7644517\tIDA\t\tF\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:1902884\tPMID:7961422\tIMP\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:1900189\tPMID:20348252\tIMP\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:1900233\tPMID:20348252\tIMP\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:0071236\tPMID:18838593\tIMP\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:0000345\tPMID:7644517\tIDA\t\tC\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:1900036\tPMID:9159526\tIDA\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:0009405\tPMID:8698507\tIMP\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:0036460\tPMID:19226327\tIDA\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:0032885\tPMID:7928961\tIMP\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0763\tmucA\t\tGO:0016989\tPMID:22842599\tIMP\t\tF\tanti-sigma factor MucA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0763\tmucA\t\tGO:0032885\tPMID:8759866\tIMP\t\tP\tanti-sigma factor MucA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0764\tmucB\t\tGO:0032885\tPMID:9171421\tIMP\t\tP\tnegative regulator for alginate biosynthesis MucB\talgN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0765\tmucC\t\tGO:0032885\tPMID:8550474\tIMP\t\tP\tpositive regulator for alginate biosynthesis MucC\tAlgM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0766\tmucD\t\tGO:0004252\tPMID:16376476\tISS\tRefSeq:NP_414703.1\tF\tserine protease MucD precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0766\tmucD\t\tGO:0007165\tPMID:21036998\tIDA\t\tP\tserine protease MucD precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0766\tmucD\t\tGO:0042597\tPMID:21713511\tIDA\t\tC\tserine protease MucD precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0768\tlepB\t\tGO:0008233\tPMID:22730125\tIDA\t\tF\tsignal peptidase I\tSPASE I|lep|leader peptidase 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0779\tasrA\t\tGO:0080164\tPMID:18043907\tIMP\t\tP\tAsrA\taminoglycoside-induced stress response ATP-dependent protease|asrA|AsrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0779\tasrA\t\tGO:0071236\tPMID:21357290\tIMP\t\tP\tAsrA\taminoglycoside-induced stress response ATP-dependent protease|asrA|AsrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0780\tpruR\t\tGO:2001158\tPMID:12270821\tIMP\t\tP\tproline utilization regulator\tprobable transcriptional regulator|pruR|proline utilization regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0782\tputA\t\tGO:0010133\tPMID:6819140\tIDA\t\tP\tproline dehydrogenase PutA\tpruB|pruA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0782\tputA\t\tGO:0004657\tPMID:6819140\tIDA\t\tF\tproline dehydrogenase PutA\tpruB|pruA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0782\tputA\t\tGO:0003842\tPMID:6819140\tIDA\t\tF\tproline dehydrogenase PutA\tpruB|pruA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0783\tputP\t\tGO:0010133\tPMID:12270821\tIMP\t\tP\tsodium/proline symporter PutP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0783\tputP\t\tGO:0015193\tPMID:12270821\tIMP\t\tF\tsodium/proline symporter PutP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0783\tputP\t\tGO:1903809\tPMID:18833300\tIMP\t\tP\tsodium/proline symporter PutP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0785\tazoR1\t\tGO:0016655\tPMID:24915188\tIDA\t\tF\tFMN-dependent NADH-azoreductase 1, AzoR1\tazoR|azobenzene reductase, AzoR|azoR1|FMN-dependent NADH-azoreductase 1, AzoR1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0788\tPA0788\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:NC\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0795\tprpC\t\tGO:0036440\tPMID:7626013\tIDA\t\tF\tcitrate synthase 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0795\tprpC\t\tGO:0045239\tPMID:7626013\tIDA\t\tC\tcitrate synthase 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0795\tprpC\t\tGO:0006099\tPMID:7626013\tIDA\t\tP\tcitrate synthase 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0807\tampDh3\t\tGO:0008745\tPMID:23510438\tIDA\t\tF\tAmpDh3\tampDh3|AmpDh3 (changed from conserved hypothetical protein)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0807\tampDh3\t\tGO:0009276\tPMID:23510438\tIDA\t\tC\tAmpDh3\tampDh3|AmpDh3 (changed from conserved hypothetical protein)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0807\tampDh3\t\tGO:0033252\tPMID:23510438\tIDA\t\tP\tAmpDh3\tampDh3|AmpDh3 (changed from conserved hypothetical protein)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0070930\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0031647\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0831\toruR\t\tGO:0006593\tPMID:9401045\tIMP\t\tP\ttranscriptional regulator OruR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0842\tPA0842\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0015628\tPMID:11726509\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0052051\tPMID:2120196\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0016298\tPMID:2120196\tIDA\t\tF\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0034480\tPMID:12410824\tIDA\t\tF\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0044179\tPMID:12410824\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0044179\tPMID:23667230\tIMP\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:23667230\tIMP\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:21562128\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:21562128\tIMP\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:21041488\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:2496027\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:8282618\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0005615\tPMID:16484187\tIMP\t\tC\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0033188\tPMID:12799377\tIDA\t\tF\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0005615\tPMID:9199466\tIDA\t\tC\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0005615\tPMID:19360133\tIDA\t\tC\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0845\tcerN\t\tGO:0017040\tPMID:10593963\tIMP\t\tF\tCerN\tCerN|cerN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0845\tcerN\t\tGO:0051872\tPMID:24465209\tIDA\t\tP\tCerN\tCerN|cerN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0847\tPA0847\t\tGO:0052621\tPMID:16477007\tIDA\t\tF\tdiguanylate cyclase\tdiguanylate cyclase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0852\tcbpD\t\tGO:0015628\tPMID:10671445\tIDA\t\tP\tchitin-binding protein CbpD precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0852\tcbpD\t\tGO:0043952\tPMID:10671445\tIDA\t\tP\tchitin-binding protein CbpD precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0852\tcbpD\t\tGO:0052051\tPMID:10671445\tIDA\t\tP\tchitin-binding protein CbpD precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0852\tcbpD\t\tGO:0008061\tPMID:10671445\tIDA\t\tF\tchitin-binding protein CbpD precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0852\tcbpD\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tchitin-binding protein CbpD precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0870\tphhC\t\tGO:0006559\tPMID:8939433\tISS\t\tP\taromatic amino acid aminotransferase\taspC|tyrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0871\tphhB\t\tGO:0006559\tPMID:8939433\tISS\t\tP\tpterin-4-alpha-carbinolamine dehydratase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0872\tphhA\t\tGO:0006559\tPMID:8939433\tISS\t\tP\tphenylalanine-4-hydroxylase\tphenylalanine 4-monooxygenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0873\tphhR\t\tGO:0006559\tPMID:8939433\tIMP\t\tP\ttranscriptional regulator PhhR\ttyrR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0888\taotJ\t\tGO:1902023\tPMID:9791103\tIGI\t\tP\targinine/ornithine binding protein AotJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0888\taotJ\t\tGO:0015822\tPMID:9791103\tIGI\t\tP\targinine/ornithine binding protein AotJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0888\taotJ\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\targinine/ornithine binding protein AotJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0888\taotJ\t\tGO:1902765\tPMID:18833300\tIMP\t\tP\targinine/ornithine binding protein AotJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0888\taotJ\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\targinine/ornithine binding protein AotJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0889\taotQ\t\tGO:1902023\tPMID:9791103\tIGI\t\tP\targinine/ornithine transport protein AotQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0889\taotQ\t\tGO:0015822\tPMID:9791103\tIGI\t\tP\targinine/ornithine transport protein AotQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0889\taotQ\t\tGO:1902765\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0889\taotQ\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0890\taotM\t\tGO:1902023\tPMID:9791103\tIGI\t\tP\targinine/ornithine transport protein AotM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0890\taotM\t\tGO:0015822\tPMID:9791103\tIGI\t\tP\targinine/ornithine transport protein AotM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0890\taotM\t\tGO:1902765\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0890\taotM\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0892\taotP\t\tGO:1902023\tPMID:9791103\tIGI\t\tP\targinine/ornithine transport protein AotP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0892\taotP\t\tGO:0015822\tPMID:9791103\tIGI\t\tP\targinine/ornithine transport protein AotP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0892\taotP\t\tGO:1902765\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0892\taotP\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0893\targR\t\tGO:1900081\tPMID:9286981\tIMP\t\tP\ttranscriptional regulator ArgR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0893\targR\t\tGO:1900079\tPMID:9286981\tIMP\t\tP\ttranscriptional regulator ArgR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0895\taruC\t\tGO:0003992\tPMID:16593724\tIDA\t\tF\tN2-Succinylornithine 5-aminotransferase (SOAT) = N2-acetylornithine 5-aminotransferase (ACOAT)\tdapC|argD|astC|succinylornithine aminotransferase|N2-Succinylornithine 5-aminotransferase (SOAT) = N2-acetylornithine 5-aminotransferase (ACOAT)|N-succinylglutamate 5-semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0895\taruC\t\tGO:0006526\tPMID:16593724\tIDA\t\tP\tN2-Succinylornithine 5-aminotransferase (SOAT) = N2-acetylornithine 5-aminotransferase (ACOAT)\tdapC|argD|astC|succinylornithine aminotransferase|N2-Succinylornithine 5-aminotransferase (SOAT) = N2-acetylornithine 5-aminotransferase (ACOAT)|N-succinylglutamate 5-semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0895\taruC\t\tGO:0006527\tPMID:16593724\tIDA\t\tP\tN2-Succinylornithine 5-aminotransferase (SOAT) = N2-acetylornithine 5-aminotransferase (ACOAT)\tdapC|argD|astC|succinylornithine aminotransferase|N2-Succinylornithine 5-aminotransferase (SOAT) = N2-acetylornithine 5-aminotransferase (ACOAT)|N-succinylglutamate 5-semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0896\taruF\t\tGO:0006527\tPMID:16593724\tIDA\t\tP\tsubunit I of arginine N2-succinyltransferase = ornithine N2-succinyltransferase\tsubunit I of arginine N2-succinyltransferase = ornithine N2-succinyltransferase|arginine/ornithine succinyltransferase AI subunit|aruAI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0897\taruG\t\tGO:0006527\tPMID:16593724\tIDA\t\tP\tsubunit II of arginine N2-succinyltransferase = ornithine N2-succinyltransferase\tsubunit II of arginine N2-succinyltransferase = ornithine N2-succinyltransferase|arginine/ornithine succinyltransferase AII subunit|aruAII\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0898\taruD\t\tGO:0006527\tPMID:16593724\tIDA\t\tP\tN-Succinylglutamate 5-semialdehyde dehydrogenase\tastD|N-Succinylglutamate 5-semialdehyde dehydrogenase|succinylglutamate 5-semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0899\taruB\t\tGO:0006527\tPMID:16593724\tIDA\t\tP\tN2-Succinylarginine dihydrolase\tN2-Succinylarginine dihydrolase|succinylarginine dihydrolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0901\taruE\t\tGO:0006527\tPMID:16593724\tIDA\t\tP\tN-Succinylglutamate desuccinylase\tastE|N-Succinylglutamate desuccinylase|succinylglutamate desuccinylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:0009372\tPMID:11673439\tIMP\t\tP\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:0009405\tPMID:16622241\tIMP\t\tP\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:1900190\tPMID:20735777\tIMP\t\tP\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:0030254\tPMID:19426209\tIMP\t\tP\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:0003729\tPMID:19426209\tIPI\tPseudoCAP:PA0081\tF\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:0003729\tPMID:19426209\tIPI\tPseudoCAP:PA4492\tF\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:0003729\tPMID:19426209\tIPI\tPseudoCAP:PA0082\tF\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:0003729\tPMID:19426209\tIPI\tPseudoCAP:PA0527.1\tF\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:0003729\tPMID:19426209\tIPI\tPseudoCAP:PA3621.1\tF\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:0033103\tPMID:19426209\tIMP\t\tP\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:0043455\tPMID:11673439\tIMP\t\tP\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0906\talpR\t\tGO:0006974\tPMID:26100878\tIDA\t\tP\tlysis phenotype repressor, AlpR\talpR|lysis phenotype repressor, AlpR|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0906\talpR\t\tGO:0045892\tPMID:26100878\tIDA\t\tP\tlysis phenotype repressor, AlpR\talpR|lysis phenotype repressor, AlpR|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0906\talpR\t\tGO:0001896\tPMID:26100878\tIMP\t\tP\tlysis phenotype repressor, AlpR\talpR|lysis phenotype repressor, AlpR|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0907\talpA\t\tGO:0006974\tPMID:26100878\tIDA\t\tP\tlysis phenotype activator, AlpA\talpA|lysis phenotype activator, AlpA|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0907\talpA\t\tGO:0043068\tPMID:26100878\tIMP\t\tP\tlysis phenotype activator, AlpA\talpA|lysis phenotype activator, AlpA|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0907\talpA\t\tGO:0001896\tPMID:26100878\tIMP\t\tP\tlysis phenotype activator, AlpA\talpA|lysis phenotype activator, AlpA|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0908\talpB\t\tGO:0071236\tPMID:20679510\tIMP\t\tP\tAlpB\talpB|AlpB|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0908\talpB\t\tGO:0006974\tPMID:26100878\tIDA\t\tP\tAlpB\talpB|AlpB|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0908\talpB\t\tGO:0001896\tPMID:26100878\tIMP\t\tP\tAlpB\talpB|AlpB|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0909\talpC\t\tGO:0006974\tPMID:26100878\tIDA\t\tP\tAlpC\talpC|AlpC|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0909\talpC\t\tGO:0001896\tPMID:26100878\tIMP\t\tP\tAlpC\talpC|AlpC|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0910\talpD\t\tGO:0006974\tPMID:26100878\tIDA\t\tP\tAlpD\talpD|AlpD|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0910\talpD\t\tGO:0001896\tPMID:26100878\tIMP\t\tP\tAlpD\talpD|AlpD|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0911\talpE\t\tGO:0006974\tPMID:26100878\tIDA\t\tP\tAlpE\talpE|AlpE|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0911\talpE\t\tGO:0001896\tPMID:26100878\tIMP\t\tP\tAlpE\talpE|AlpE|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0913\tmgtE\t\tGO:0000287\tPMID:24722909\tIMP\t\tF\tMgtE\tMgtE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0913\tmgtE\t\tGO:0015693\tPMID:24722909\tIMP\t\tP\tMgtE\tMgtE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0919\tPA0919\t\tGO:0055091\tPMID:23792962\tIMP\t\tP\talanyl-phosphatidylglycerol hydrolase\talanyl-phosphatidylglycerol hydrolase|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0919\tPA0919\t\tGO:0016787\tPMID:23792962\tIDA\t\tF\talanyl-phosphatidylglycerol hydrolase\talanyl-phosphatidylglycerol hydrolase|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0920\tPA0920\t\tGO:0047637\tPMID:26261323\tIDA\t\tF\talanyl-phosphatidylglycerol synthase\talanyl-phosphatidylglycerol synthase|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0920\tPA0920\t\tGO:0055091\tPMID:26261323\tIDA\t\tP\talanyl-phosphatidylglycerol synthase\talanyl-phosphatidylglycerol synthase|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0928\tgacS\t\tGO:0000155\tPMID:7604262\tISS\t\tF\tsensor/response regulator hybrid\tlemA|gacS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0928\tgacS\t\tGO:2000147\tPMID:11447209\tIMP\t\tP\tsensor/response regulator hybrid\tlemA|gacS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0928\tgacS\t\tGO:1900378\tPMID:11447209\tIMP\t\tP\tsensor/response regulator hybrid\tlemA|gacS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0931\tpirA\t\tGO:0042931\tPMID:15899402\tIMP\t\tF\tferric enterobactin receptor PirA\tpirA|ferric enterobactin receptor PirA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0931\tpirA\t\tGO:0015344\tPMID:15899402\tIMP\t\tF\tferric enterobactin receptor PirA\tpirA|ferric enterobactin receptor PirA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0931\tpirA\t\tGO:0042930\tPMID:15899402\tIMP\t\tP\tferric enterobactin receptor PirA\tpirA|ferric enterobactin receptor PirA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0931\tpirA\t\tGO:0015891\tPMID:15899402\tIMP\t\tP\tferric enterobactin receptor PirA\tpirA|ferric enterobactin receptor PirA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0934\trelA\t\tGO:0015968\tPMID:15385461\tIMP\t\tP\tGTP pyrophosphokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0934\trelA\t\tGO:0009405\tPMID:15385461\tIMP\t\tP\tGTP pyrophosphokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0938\twzz2\t\tGO:0009243\tPMID:12534470\tEXP\t\tP\tWzz2\twzz2|Wzz2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0938\twzz2\t\tGO:0016020\tPMID:23955007\tIDA\t\tC\tWzz2\twzz2|Wzz2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0938\twzz2\t\tGO:0009276\tPMID:24309320\tIDA\t\tC\tWzz2\twzz2|Wzz2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0938\twzz2\t\tGO:0043165\tPMID:12534470\tIDA\t\tP\tWzz2\twzz2|Wzz2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0938\twzz2\t\tGO:0043165\tPMID:24309320\tIDA\t\tP\tWzz2\twzz2|Wzz2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0938\twzz2\t\tGO:0043165\tPMID:20418877\tISS\t\tP\tWzz2\twzz2|Wzz2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0938\twzz2\t\tGO:0005886\tPMID:12534470\tIDA\t\tC\tWzz2\twzz2|Wzz2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0938\twzz2\t\tGO:0005886\tPMID:23955007\tIDA\t\tC\tWzz2\twzz2|Wzz2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0938\twzz2\t\tGO:0098567\tPMID:12534470\tIDA\t\tC\tWzz2\twzz2|Wzz2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0944\tpurN\t\tGO:0071978\tPMID:17158671\tIMP\t\tP\tphosphoribosylaminoimidazole synthetase\tphosphoribosylformylglycinamidine cyclo-ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0944\tpurN\t\tGO:0044010\tPMID:17158671\tIMP\t\tP\tphosphoribosylaminoimidazole synthetase\tphosphoribosylformylglycinamidine cyclo-ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0949\twrbA\t\tGO:0016655\tPMID:16672604\tIDA\t\tF\tTrp repressor binding protein WrbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0949\twrbA\t\tGO:0034599\tPMID:25085734\tIMP\t\tP\tTrp repressor binding protein WrbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0949\twrbA\t\tGO:0003955\tPMID:25085734\tIMP\t\tF\tTrp repressor binding protein WrbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0958\toprD\t\tGO:0015288\tPMID:2120174\tIMP\t\tF\tBasic amino acid, basic peptide and imipenem outer membrane porin OprD precursor\tProtein D2|Porin D\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0958\toprD\t\tGO:0019867\tPMID:2120174\tIDA\t\tC\tBasic amino acid, basic peptide and imipenem outer membrane porin OprD precursor\tProtein D2|Porin D\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0967\truvB\t\tGO:0006281\tPMID:10913087\tIMP\t\tP\tHolliday junction DNA helicase RuvB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0967\truvB\t\tGO:0071247\tPMID:16105671\tIMP\t\tP\tHolliday junction DNA helicase RuvB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0967\truvB\t\tGO:0006281\tPMID:16105671\tIMP\t\tP\tHolliday junction DNA helicase RuvB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0967\truvB\t\tGO:0072715\tPMID:16105671\tIMP\t\tP\tHolliday junction DNA helicase RuvB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0996\tpqsA\t\tGO:0044550\tPMID:12426334\tIMP\t\tP\tPqsA\tpqsA|PqsA|probable coenzyme A ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0997\tpqsB\t\tGO:0044550\tPMID:12426334\tIMP\t\tP\tPqsB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0998\tpqsC\t\tGO:0044550\tPMID:12426334\tIMP\t\tP\tPqsC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0999\tpqsD\t\tGO:0044550\tPMID:12426334\tIMP\t\tP\t3-oxoacyl-[acyl-carrier-protein] synthase III\tfabH1|acetyl CoA ACP transacetylase|beta-ketoacyl-ACP synthase III\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0999\tpqsD\t\tGO:0016746\tPMID:18728009\tIDA\t\tF\t3-oxoacyl-[acyl-carrier-protein] synthase III\tfabH1|acetyl CoA ACP transacetylase|beta-ketoacyl-ACP synthase III\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1000\tpqsE\t\tGO:0044550\tPMID:12426334\tIMP\t\tP\tQuinolone signal response protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1001\tphnA\t\tGO:0004049\tPMID:2153661\tIMP\t\tF\tanthranilate synthase component I\tphenazine biosynthesis protein PhnA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1001\tphnA\t\tGO:0002047\tPMID:2153661\tIMP\t\tP\tanthranilate synthase component I\tphenazine biosynthesis protein PhnA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1002\tphnB\t\tGO:0004049\tPMID:2153661\tIMP\t\tF\tanthranilate synthase component II\tphenazine biosynthesis protein PhnB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1002\tphnB\t\tGO:0002047\tPMID:2153661\tIMP\t\tP\tanthranilate synthase component II\tphenazine biosynthesis protein PhnB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1003\tmvfR\t\tGO:0051349\tPMID:14739337\tIMP\t\tP\tTranscriptional regulator MvfR\tpqsR|Transcriptional regulator MvfR|mvfR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1003\tmvfR\t\tGO:0043902\tPMID:15686549\tIMP\t\tP\tTranscriptional regulator MvfR\tpqsR|Transcriptional regulator MvfR|mvfR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1003\tmvfR\t\tGO:0034762\tPMID:19497948\tIMP\t\tP\tTranscriptional regulator MvfR\tpqsR|Transcriptional regulator MvfR|mvfR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1003\tmvfR\t\tGO:0044212\tPMID:16735731\tIDA\t\tF\tTranscriptional regulator MvfR\tpqsR|Transcriptional regulator MvfR|mvfR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1005\tPA1005\t\tGO:0008237\tPMID:9015299\tISS\tUniProtKB:P47154\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1006\tPA1006\t\tGO:0006875\tPMID:23409003\tIMP\t\tP\tProtein PA1006\tyrkI|Protein PA1006|conserved hypothetical protein|YhhP/TusA homolog\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1006\tPA1006\t\tGO:0042128\tPMID:23409004\tIMP\t\tP\tProtein PA1006\tyrkI|Protein PA1006|conserved hypothetical protein|YhhP/TusA homolog\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1006\tPA1006\t\tGO:0009405\tPMID:23409004\tIMP\t\tP\tProtein PA1006\tyrkI|Protein PA1006|conserved hypothetical protein|YhhP/TusA homolog\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1006\tPA1006\t\tGO:0044010\tPMID:23409004\tIMP\t\tP\tProtein PA1006\tyrkI|Protein PA1006|conserved hypothetical protein|YhhP/TusA homolog\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1006\tPA1006\t\tGO:0005515\tPMID:23409003\tIPI\tPseudoCAP:PA3667\tF\tProtein PA1006\tyrkI|Protein PA1006|conserved hypothetical protein|YhhP/TusA homolog\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1006\tPA1006\t\tGO:0005515\tPMID:23409003\tIPI\tPseudoCAP:PA3668\tF\tProtein PA1006\tyrkI|Protein PA1006|conserved hypothetical protein|YhhP/TusA homolog\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1006\tPA1006\t\tGO:0005515\tPMID:23409003\tIPI\tPseudoCAP:PA3814\tF\tProtein PA1006\tyrkI|Protein PA1006|conserved hypothetical protein|YhhP/TusA homolog\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1006\tPA1006\t\tGO:0046916\tPMID:23409003\tIMP\t\tP\tProtein PA1006\tyrkI|Protein PA1006|conserved hypothetical protein|YhhP/TusA homolog\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1014\twapB\t\tGO:0008919\tPMID:21441506\tIDA\t\tF\t1,2-glucosyltransferase WapB\t1,2-glucosyltransferase WapB|wapB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1014\twapB\t\tGO:0009244\tPMID:23750877\tISS\t\tP\t1,2-glucosyltransferase WapB\t1,2-glucosyltransferase WapB|wapB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1014\twapB\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\t1,2-glucosyltransferase WapB\t1,2-glucosyltransferase WapB|wapB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1024\tPA1024\t\tGO:0016491\tPMID:27502282\tIDA\t\tF\tNADH:quinone reductase\t2-Nitropropane Dioxygenase (changed from hypothetical protein)|NADH:quinone reductase|2-Nitropropane Dioxygenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1024\tPA1024\t\tGO:0055114\tPMID:27502282\tIDA\t\tP\tNADH:quinone reductase\t2-Nitropropane Dioxygenase (changed from hypothetical protein)|NADH:quinone reductase|2-Nitropropane Dioxygenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1032\tquiP\t\tGO:0016811\tPMID:16461666\tIMP\t\tF\tQuiP\tpac|quiP|acyl-homoserine lactone acylase, QuiP|QuiP (changed from probable penicillin amidase)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1047\tPA1047\t\tGO:0052689\tPMID:17631636\tISS\t\tF\tprobable esterase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1047\tPA1047\t\tGO:0042597\tPMID:17631636\tISS\t\tC\tprobable esterase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1049\tpdxH\t\tGO:0004733\tPMID:7860596\tISS\t\tF\tpyridoxine 5'-phosphate oxidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1054\tshaA\t\tGO:0015385\tPMID:16030218\tIMP\t\tF\tShaA\tphaA|ShaA|shaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1054\tshaA\t\tGO:0035725\tPMID:16030218\tIMP\t\tP\tShaA\tphaA|ShaA|shaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1055\tshaB\t\tGO:0015385\tPMID:16030218\tIMP\t\tF\tShaB\tphaC|ShaB|shaB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1055\tshaB\t\tGO:0035725\tPMID:16030218\tIMP\t\tP\tShaB\tphaC|ShaB|shaB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1056\tshaC\t\tGO:0015385\tPMID:16030218\tIMP\t\tF\tShaC\tphaD|ShaC|shaC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1056\tshaC\t\tGO:0035725\tPMID:16030218\tIMP\t\tP\tShaC\tphaD|ShaC|shaC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1057\tshaD\t\tGO:0015385\tPMID:16030218\tIMP\t\tF\tShaD\tphaE|ShaD|shaD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1057\tshaD\t\tGO:0035725\tPMID:16030218\tIMP\t\tP\tShaD\tphaE|ShaD|shaD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1058\tshaE\t\tGO:0015385\tPMID:16030218\tIMP\t\tF\tShaE\tphaF|ShaE|shaE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1058\tshaE\t\tGO:0035725\tPMID:16030218\tIMP\t\tP\tShaE\tphaF|ShaE|shaE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1059\tshaF\t\tGO:0015385\tPMID:16030218\tIMP\t\tF\tShaF\tphaG|ShaF|shaF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1059\tshaF\t\tGO:0035725\tPMID:16030218\tIMP\t\tP\tShaF\tphaG|ShaF|shaF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1070\tbraG\t\tGO:0042941\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1070\tbraG\t\tGO:0015808\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1071\tbraF\t\tGO:0042941\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1071\tbraF\t\tGO:0015808\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1071\tbraF\t\tGO:1903806\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1071\tbraF\t\tGO:1903805\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1072\tbraE\t\tGO:0042941\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1073\tbraD\t\tGO:0042941\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1073\tbraD\t\tGO:0015808\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1073\tbraD\t\tGO:1903806\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1074\tbraC\t\tGO:0015803\tPMID:2509433\tIDA\t\tP\tbranched-chain amino acid transport protein BraC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1074\tbraC\t\tGO:0042941\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1074\tbraC\t\tGO:0015808\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1074\tbraC\t\tGO:1903806\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1074\tbraC\t\tGO:1903805\tPMID:18833300\tIMP\t\tP\tbranched-chain amino acid transport protein BraC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1077\tflgB\t\tGO:0044780\tPMID:2129540\tISS\t\tP\tflagellar basal-body rod protein FlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1077\tflgB\t\tGO:0009429\tPMID:2129540\tISS\t\tC\tflagellar basal-body rod protein FlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1078\tflgC\t\tGO:0044780\tPMID:2129540\tISS\t\tP\tflagellar basal-body rod protein FlgC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1078\tflgC\t\tGO:0009429\tPMID:2129540\tISS\t\tC\tflagellar basal-body rod protein FlgC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1079\tflgD\t\tGO:0009424\tPMID:8157595\tISS\t\tC\tflagellar basal-body rod modification protein FlgD\tflagellar hook cap (scaffold)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1079\tflgD\t\tGO:0032947\tPMID:8157595\tISS\t\tF\tflagellar basal-body rod modification protein FlgD\tflagellar hook cap (scaffold)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1081\tflgF\t\tGO:0044780\tPMID:2129540\tISS\t\tP\tflagellar basal-body rod protein FlgF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1081\tflgF\t\tGO:0009429\tPMID:2129540\tISS\t\tC\tflagellar basal-body rod protein FlgF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1082\tflgG\t\tGO:0044780\tPMID:2129540\tISS\t\tP\tflagellar basal-body rod protein FlgG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1082\tflgG\t\tGO:0009426\tPMID:2129540\tISS\t\tC\tflagellar basal-body rod protein FlgG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1083\tflgH\t\tGO:0071973\tPMID:2544561\tISS\t\tP\tflagellar L-ring protein precursor FlgH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1083\tflgH\t\tGO:0009427\tPMID:2544561\tISS\t\tC\tflagellar L-ring protein precursor FlgH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1084\tflgI\t\tGO:0009428\tPMID:2544561\tISS\t\tC\tflagellar P-ring protein precursor FlgI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1084\tflgI\t\tGO:0044780\tPMID:2544561\tISS\t\tP\tflagellar P-ring protein precursor FlgI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1085\tflgJ\t\tGO:0003796\tPMID:10049388\tISS\t\tF\tflagellar protein FlgJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1085\tflgJ\t\tGO:0044780\tPMID:10049388\tISS\t\tP\tflagellar protein FlgJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1086\tflgK\t\tGO:0009424\tPMID:2193164\tISS\t\tC\tflagellar hook-associated protein 1 FlgK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1086\tflgK\t\tGO:0044780\tPMID:2193164\tISS\t\tP\tflagellar hook-associated protein 1 FlgK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1087\tflgL\t\tGO:0009424\tPMID:2193164\tISS\t\tC\tflagellar hook-associated protein type 3 FlgL\tflaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1087\tflgL\t\tGO:0044780\tPMID:2193164\tISS\t\tP\tflagellar hook-associated protein type 3 FlgL\tflaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1091\tfgtA\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tflagellar glycosyl transferase, FgtA\tfgtA|flagellar glycosyl transferase, FgtA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1092\tfliC\t\tGO:0071973\tPMID:9423837\tIDA\t\tP\tflagellin type B\tflagellar filament protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1094\tfliD\t\tGO:0007155\tPMID:9488388\tIDA\t\tP\tflagellar capping protein FliD\thook-associated protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1094\tfliD\t\tGO:0009421\tPMID:9488388\tIDA\t\tC\tflagellar capping protein FliD\thook-associated protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:2000155\tPMID:12218010\tIMP\t\tP\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:0006351\tPMID:9287015\tIDA\t\tP\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:0006355\tPMID:12218010\tIDA\t\tP\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:0010811\tPMID:9287015\tIMP\t\tP\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:1901202\tPMID:18485075\tIMP\t\tP\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:0035438\tPMID:18485075\tIDA\t\tF\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:1902021\tPMID:9287015\tIMP\t\tP\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:1902021\tPMID:14617143\tIMP\t\tP\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:0000987\tPMID:18485075\tIDA\t\tF\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:0001217\tPMID:22581773\tIMP\t\tF\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:0001216\tPMID:22581773\tIMP\t\tF\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1097\tfleQ\t\tGO:0035438\tPMID:24167275\tIPI\tCHEBI:49537\tF\ttranscriptional regulator FleQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1098\tfleS\t\tGO:0000160\tPMID:7591148\tIDA\t\tP\ttwo-component sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1098\tfleS\t\tGO:0000155\tPMID:7591148\tISS\t\tF\ttwo-component sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1098\tfleS\t\tGO:0000155\tPMID:7591148\tISA\tPseudoCAP:PAK_04273\tF\ttwo-component sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1099\tfleR\t\tGO:0045785\tPMID:7591148\tIMP\t\tP\ttwo-component response regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1099\tfleR\t\tGO:0000156\tPMID:7591148\tISS\t\tF\ttwo-component response regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1099\tfleR\t\tGO:2000155\tPMID:7591148\tIMP\t\tP\ttwo-component response regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1099\tfleR\t\tGO:1900191\tPMID:15231779\tIMP\t\tP\ttwo-component response regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1099\tfleR\t\tGO:0000156\tPMID:7591148\tISA\tPseudoCAP:PAK_04272\tF\ttwo-component response regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1100\tfliE\t\tGO:0009424\tPMID:1551848\tISS\t\tC\tflagellar hook-basal body complex protein FliE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1100\tfliE\t\tGO:0009425\tPMID:1551848\tISS\t\tC\tflagellar hook-basal body complex protein FliE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1102\tfliG\t\tGO:0009288\tPMID:8224881\tISS\t\tC\tflagellar motor switch protein FliG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1102\tfliG\t\tGO:0003774\tPMID:8224881\tISS\t\tF\tflagellar motor switch protein FliG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1104\tfliI\t\tGO:0005524\tPMID:8491729\tISS\t\tF\tflagellum-specific ATP synthase FliI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1104\tfliI\t\tGO:0016887\tPMID:8491729\tISS\t\tF\tflagellum-specific ATP synthase FliI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1107\troeA\t\tGO:0052621\tPMID:20978535\tIDA\t\tF\tRoeA\tRoeA|roeA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1107\troeA\t\tGO:0045226\tPMID:20978535\tIMP\t\tP\tRoeA\tRoeA|roeA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1107\troeA\t\tGO:0052621\tPMID:16477007\tIDA\t\tF\tRoeA\tRoeA|roeA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1120\ttpbB\t\tGO:0052621\tPMID:19543378\tIMP\t\tF\tdiguanylate cyclase TpbB\tyfiN|YfiN|tpbB|diguanylate cyclase TpbB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1120\ttpbB\t\tGO:0052621\tPMID:16477007\tIDA\t\tF\tdiguanylate cyclase TpbB\tyfiN|YfiN|tpbB|diguanylate cyclase TpbB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1120\ttpbB\t\tGO:0052621\tPMID:19543378\tISS\tPseudoCAP:PA14_49890\tF\tdiguanylate cyclase TpbB\tyfiN|YfiN|tpbB|diguanylate cyclase TpbB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1130\trhlC\t\tGO:0016740\tPMID:11359576\tIDA\t\tF\trhamnosyltransferase 2\trhlC|rhamnosyltransferase 2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1130\trhlC\t\tGO:0009247\tPMID:11359576\tIDA\t\tP\trhamnosyltransferase 2\trhlC|rhamnosyltransferase 2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1130\trhlC\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\trhamnosyltransferase 2\trhlC|rhamnosyltransferase 2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1150\tpys2\t\tGO:0019835\tPMID:8491711\tIDA\t\tP\tpyocin S2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1151\timm2\t\tGO:0030153\tPMID:8491711\tIDA\t\tP\tpyocin S2 immunity protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1155\tnrdB\t\tGO:0005971\tPMID:16829681\tIDA\t\tC\tNrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase\tNrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1155\tnrdB\t\tGO:0009263\tPMID:16829681\tIDA\t\tP\tNrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase\tNrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1155\tnrdB\t\tGO:0005506\tPMID:16829681\tIDA\t\tF\tNrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase\tNrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1156\tnrdA\t\tGO:0005971\tPMID:16829681\tIDA\t\tC\tNrdA, catalytic component of class Ia ribonucleotide reductase\tNrdA, catalytic component of class Ia ribonucleotide reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1163\tndvB\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tNdvB\tndvB|NdvB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1165\tpcpS\t\tGO:0016740\tPMID:12381736\tIDA\t\tF\tPcpS\tPseudomonas aeruginosa carrier protein synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1171\tsltB2\t\tGO:0008933\tPMID:11790124\tISS\tUniProtKB:P41052\tF\tSltB2\tsltB2|SltB2|probable transglycolase|soluble lytic transglycosylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1171\tsltB2\t\tGO:0009254\tPMID:11790124\tISS\tUniProtKB:P41052\tP\tSltB2\tsltB2|SltB2|probable transglycolase|soluble lytic transglycosylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1172\tnapC\t\tGO:0008940\tPMID:7639719\tISS\t\tF\tcytochrome c-type protein NapC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1175\tnapD\t\tGO:0008940\tPMID:7639719\tISS\t\tF\tNapD protein of periplasmic nitrate reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1176\tnapF\t\tGO:0009325\tPMID:15371424\tISS\t\tC\tferredoxin protein NapF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1177\tnapE\t\tGO:0009325\tPMID:9560320\tISS\t\tC\tperiplasmic nitrate reductase protein NapE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1178\toprH\t\tGO:0001530\tPMID:21865172\tIDA\t\tF\tPhoP/Q and low Mg2+ inducible outer membrane protein H1 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1178\toprH\t\tGO:0009279\tPMID:2498288\tIDA\t\tC\tPhoP/Q and low Mg2+ inducible outer membrane protein H1 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1178\toprH\t\tGO:0016021\tPMID:2498288\tIDA\t\tC\tPhoP/Q and low Mg2+ inducible outer membrane protein H1 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1179\tphoP\t\tGO:0071073\tPMID:10567263\tIMP\t\tP\ttwo-component response regulator PhoP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1179\tphoP\t\tGO:0071236\tPMID:21968359\tISS\tPseudoCAP:Y880_RS20140\tP\ttwo-component response regulator PhoP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1180\tphoQ\t\tGO:0071236\tPMID:21968359\tISS\tPseudoCAP:Y880_RS20135\tP\ttwo-component sensor PhoQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1183\tdctA\t\tGO:0015740\tPMID:21725012\tIMP\t\tP\tC4-dicarboxylate transport protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1183\tdctA\t\tGO:0015741\tPMID:21725012\tISS\t\tP\tC4-dicarboxylate transport protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1183\tdctA\t\tGO:0015740\tPMID:21725012\tIDA\t\tP\tC4-dicarboxylate transport protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1183\tdctA\t\tGO:0006835\tPMID:21725012\tIMP\t\tP\tC4-dicarboxylate transport protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1198\tPA1198\t\tGO:0008239\tPMID:23062283\tISS\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1199\tPA1199\t\tGO:0008239\tPMID:23062283\tISS\t\tF\tprobable lipoprotein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1204\tPA1204\t\tGO:0016655\tPMID:24915188\tIDA\t\tF\tNAD(P)H quinone oxidoreductase\tyieF|oxidoreductase|NAD(P)H quinone oxidoreductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1204\tPA1204\t\tGO:0003955\tPMID:25085734\tIMP\t\tF\tNAD(P)H quinone oxidoreductase\tyieF|oxidoreductase|NAD(P)H quinone oxidoreductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1207\tkefB\t\tGO:0015503\tPMID:7934942\tISS\t\tF\tglutathione-regulated potassium-efflux system protein KefB\ttrkB|kefC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1225\tPA1225\t\tGO:0003960\tPMID:29715013\tIDA\t\tF\tFAD-dependent NADPH:quinone reductase\tFAD-dependent NADPH:quinone reductase|probable NAD(P)H dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1242\tsprP\t\tGO:0008233\tPMID:24376018\tIDA\t\tF\tSprP\tSprP|sprP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1242\tsprP\t\tGO:1900377\tPMID:24376018\tIMP\t\tP\tSprP\tSprP|sprP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1242\tsprP\t\tGO:1900232\tPMID:24376018\tIMP\t\tP\tSprP\tSprP|sprP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1242\tsprP\t\tGO:0071978\tPMID:24376018\tIMP\t\tP\tSprP\tSprP|sprP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1242\tsprP\t\tGO:0043107\tPMID:24376018\tIMP\t\tP\tSprP\tSprP|sprP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1242\tsprP\t\tGO:0071977\tPMID:24376018\tIMP\t\tP\tSprP\tSprP|sprP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1242\tsprP\t\tGO:0004252\tPMID:26175208\tIDA\t\tF\tSprP\tSprP|sprP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1246\taprD\t\tGO:0046903\tPMID:1427098\tIDA\t\tP\talkaline protease secretion protein AprD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1247\taprE\t\tGO:0046903\tPMID:1427098\tIDA\t\tP\talkaline protease secretion protein AprE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1248\taprF\t\tGO:0046903\tPMID:1427098\tIDA\t\tP\tAlkaline protease secretion outer membrane protein AprF precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1249\taprA\t\tGO:0008233\tPMID:22859302\tIDA\t\tF\talkaline metalloproteinase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1249\taprA\t\tGO:0010765\tPMID:22859302\tIDA\t\tP\talkaline metalloproteinase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1249\taprA\t\tGO:0009405\tPMID:22131330\tIDA\t\tP\talkaline metalloproteinase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1249\taprA\t\tGO:0001869\tPMID:22131330\tIDA\t\tP\talkaline metalloproteinase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1249\taprA\t\tGO:0045959\tPMID:22131330\tIDA\t\tP\talkaline metalloproteinase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1252\tdpkA\t\tGO:0019470\tPMID:27145750\tIDA\t\tP\tDpkA\tdpkA|DpkA|probable L-malate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1253\tlhpG\t\tGO:0047533\tPMID:22833679\tIDA\t\tF\talpha-ketoglutaric semialdehyde dehydrogenase, LhpG\tlhpG|alpha-ketoglutaric semialdehyde dehydrogenase, LhpG|probable semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1253\tlhpG\t\tGO:0019470\tPMID:22833679\tIDA\t\tP\talpha-ketoglutaric semialdehyde dehydrogenase, LhpG\tlhpG|alpha-ketoglutaric semialdehyde dehydrogenase, LhpG|probable semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1254\tlhpC\t\tGO:0047425\tPMID:22833679\tIDA\t\tF\tdelta1-pyrroline-4-hydroxy-2-carboxylate deaminase, LphC\tlhpC|delta1-pyrroline-4-hydroxy-2-carboxylate deaminase, LphC|probable dihydrodipicolinate synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1254\tlhpC\t\tGO:0019470\tPMID:22833679\tIDA\t\tP\tdelta1-pyrroline-4-hydroxy-2-carboxylate deaminase, LphC\tlhpC|delta1-pyrroline-4-hydroxy-2-carboxylate deaminase, LphC|probable dihydrodipicolinate synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1255\tlhpK\t\tGO:0047580\tPMID:27145750\tIMP\t\tF\tD-hydroxyproline epimerase, LhpK\tlhpK|D-hydroxyproline epimerase, LhpK|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1256\tlhpO\t\tGO:0034589\tPMID:18833300\tIMP\t\tP\tABC transporter ATP-binding protein, LhpO\tamino acid ABC transporter ATP binding protein|lhpO|ABC transporter ATP-binding protein, LhpO\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1257\tlhpN\t\tGO:0034589\tPMID:18833300\tIMP\t\tP\tamino acid ABC transporter membrane protein, LhpN\tamino acid ABC transporter membrane protein|lhpN|amino acid ABC transporter membrane protein, LhpN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1258\tlhpM\t\tGO:0034589\tPMID:27145750\tIGC\t\tP\tPermease of ABC transporter, LhpM\tlhpM|Permease of ABC transporter, LhpM|probable permease of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1259\tlhpH\t\tGO:0019470\tPMID:27145750\tIMP\t\tP\tLhpH\tlhpH|LhpH|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1260\tlhpP\t\tGO:0034589\tPMID:18833300\tIMP\t\tP\tABC transporter periplasmic-binding protein, LhpP\tamino acid ABC transporter periplasmic binding protein|lhpP|ABC transporter periplasmic-binding protein, LhpP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1261\tlhpR\t\tGO:0051957\tPMID:27145750\tIMP\t\tP\tTranscriptional regulator, LhpR\tlhpR|Transcriptional regulator, LhpR|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1261\tlhpR\t\tGO:0045764\tPMID:27145750\tIMP\t\tP\tTranscriptional regulator, LhpR\tlhpR|Transcriptional regulator, LhpR|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1266\tlhpE\t\tGO:0019470\tPMID:27145750\tIMP\t\tP\tD-hydroxyproline dehydrogenase alpha-subunit, LphE\tlhpE|D-hydroxyproline dehydrogenase alpha-subunit, LphE|probable oxidoreductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1267\tlhpB\t\tGO:0019470\tPMID:27145750\tIMP\t\tP\tD-hydroxyproline dehydrogenase beta-subunit, LphB\tlhpB|D-hydroxyproline dehydrogenase beta-subunit, LphB|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1268\tlhpA\t\tGO:0047580\tPMID:27145750\tIMP\t\tF\tHydroxyproline 2-epimerase, LhpA\tlhpA|Hydroxyproline 2-epimerase, LhpA|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1272\tcobO\t\tGO:0008817\tPMID:1917862\tISS\t\tF\tcob(I)alamin adenosyltransferase\tcobA|btuR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1275\tcobD\t\tGO:0009236\tPMID:2211520\tISS\t\tP\tcobalamin biosynthetic protein CobD\tcbiB|cobalamin biosynthetic protein CbiB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1276\tcobC\t\tGO:0009236\tPMID:2211520\tISS\t\tP\tcobalamin biosynthetic protein CobC\tcobD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1277\tcobQ\t\tGO:0051921\tPMID:1655697\tISS\t\tF\tcobyric acid synthase\tcbiP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1300\tPA1300\t\tGO:0016987\tPMID:18086184\tISS\tUniProtKB:P23484\tF\tECF sigma factor\tECF sigma factor|probable sigma-70 factor, ECF subfamily\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1300\tPA1300\t\tGO:0034756\tPMID:18086184\tISS\tUniProtKB:P23484\tP\tECF sigma factor\tECF sigma factor|probable sigma-70 factor, ECF subfamily\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1300\tPA1300\t\tGO:0005829\tPMID:18086184\tNAS\t\tC\tECF sigma factor\tECF sigma factor|probable sigma-70 factor, ECF subfamily\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1301\tPA1301\t\tGO:0016989\tPMID:18086184\tISS\t\tF\tprobable transmembrane sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1302\tPA1302\t\tGO:0038023\tPMID:18086184\tISS\t\tF\tprobable heme utilization protein precursor\thxuC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1302\tPA1302\t\tGO:0015232\tPMID:18086184\tISS\tUniProtKB:E7A868\tF\tprobable heme utilization protein precursor\thxuC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1302\tPA1302\t\tGO:0007166\tPMID:18086184\tISS\tUniProtKB:E7A868\tP\tprobable heme utilization protein precursor\thxuC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1302\tPA1302\t\tGO:0015886\tPMID:18086184\tISS\tUniProtKB:E7A868\tP\tprobable heme utilization protein precursor\thxuC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1302\tPA1302\t\tGO:0019867\tPMID:18086184\tISS\tUniProtKB:E7A868\tC\tprobable heme utilization protein precursor\thxuC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1303\tPA1303\t\tGO:0008233\tPMID:22730125\tIDA\t\tF\tsignal peptidase\tsignal peptidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1303\tPA1303\t\tGO:0045861\tPMID:22730125\tIMP\t\tP\tsignal peptidase\tsignal peptidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1303\tPA1303\t\tGO:2000145\tPMID:22730125\tIMP\t\tP\tsignal peptidase\tsignal peptidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1303\tPA1303\t\tGO:0051055\tPMID:22730125\tIMP\t\tP\tsignal peptidase\tsignal peptidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1303\tPA1303\t\tGO:1900376\tPMID:22730125\tIMP\t\tP\tsignal peptidase\tsignal peptidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1310\tphnW\t\tGO:0030170\tPMID:6406228\tISS\t\tF\t2-aminoethylphosphonate:pyruvate aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1310\tphnW\t\tGO:0047304\tPMID:6406228\tISS\t\tF\t2-aminoethylphosphonate:pyruvate aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1311\tphnX\t\tGO:0050194\tPMID:9332393\tIDA\t\tF\t2-phosphonoacetaldehyde hydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1311\tphnX\t\tGO:0019700\tPMID:9332393\tIDA\t\tP\t2-phosphonoacetaldehyde hydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1317\tcyoA\t\tGO:0009319\tPMID:2162835\tISS\t\tC\tcytochrome o ubiquinol oxidase subunit II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1335\taauR\t\tGO:0043565\tPMID:18310026\tISO\tPseudoCAP:PP_1066\tF\tAauR\tAauR|aauR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1335\taauR\t\tGO:0000155\tPMID:18310026\tISS\tPseudoCAP:PP_1066\tF\tAauR\tAauR|aauR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1336\taauS\t\tGO:0000156\tPMID:17021207\tISS\t\tF\tAauS\tAauS|aauS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1338\tggt\t\tGO:0036374\tPMID:2892489\tISS\t\tF\tgamma-glutamyltranspeptidase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1338\tggt\t\tGO:0042597\tPMID:1360205\tISS\t\tC\tgamma-glutamyltranspeptidase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1338\tggt\t\tGO:0050896\tPMID:2892489\tISS\t\tP\tgamma-glutamyltranspeptidase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1339\taatP\t\tGO:0043190\tPMID:25082951\tISS\t\tC\tAatP\tamino acid ABC transporter ATP binding protein|AatP|aatP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1339\taatP\t\tGO:0051938\tPMID:18310026\tISO\tPseudoCAP:PP_1068\tP\tAatP\tamino acid ABC transporter ATP binding protein|AatP|aatP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1339\taatP\t\tGO:0070778\tPMID:18310026\tISO\tPseudoCAP:PP_1068\tP\tAatP\tamino acid ABC transporter ATP binding protein|AatP|aatP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1339\taatP\t\tGO:0006868\tPMID:18310026\tIMP\tPseudoCAP:PP_1068\tP\tAatP\tamino acid ABC transporter ATP binding protein|AatP|aatP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1339\taatP\t\tGO:0042940\tPMID:25082951\tIMP\t\tP\tAatP\tamino acid ABC transporter ATP binding protein|AatP|aatP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1339\taatP\t\tGO:0051938\tPMID:18833300\tIMP\t\tP\tAatP\tamino acid ABC transporter ATP binding protein|AatP|aatP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1340\taatM\t\tGO:0043190\tPMID:25082951\tISS\t\tC\tAatM\tamino acid ABC transporter membrane protein|AatM|aatM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1340\taatM\t\tGO:0006868\tPMID:18310026\tIMP\t\tP\tAatM\tamino acid ABC transporter membrane protein|AatM|aatM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1340\taatM\t\tGO:0042940\tPMID:25082951\tIMP\t\tP\tAatM\tamino acid ABC transporter membrane protein|AatM|aatM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1340\taatM\t\tGO:0051938\tPMID:18833300\tIMP\t\tP\tAatM\tamino acid ABC transporter membrane protein|AatM|aatM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1340\taatM\t\tGO:1903803\tPMID:18833300\tIMP\t\tP\tAatM\tamino acid ABC transporter membrane protein|AatM|aatM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1341\taatQ\t\tGO:0043190\tPMID:25082951\tISS\t\tC\tAatQ\tamino acid ABC transporter membrane protein|AatQ|aatQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1341\taatQ\t\tGO:0051938\tPMID:18833300\tIMP\t\tP\tAatQ\tamino acid ABC transporter membrane protein|AatQ|aatQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1342\taatJ\t\tGO:0051938\tPMID:18310026\tISO\tPseudoCAP:PP_1071\tP\tAatJ\tAatJ|aatJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1342\taatJ\t\tGO:0070778\tPMID:18310026\tISO\tPseudoCAP:PP_1071\tP\tAatJ\tAatJ|aatJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1342\taatJ\t\tGO:0006868\tPMID:18310026\tISO\tPseudoCAP:PP_1071\tP\tAatJ\tAatJ|aatJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1342\taatJ\t\tGO:0006868\tPMID:18310026\tIMP\tPseudoCAP:PP_1071\tP\tAatJ\tAatJ|aatJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1342\taatJ\t\tGO:0042940\tPMID:25082951\tIMP\t\tP\tAatJ\tAatJ|aatJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1342\taatJ\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tAatJ\tAatJ|aatJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1361\tnorM\t\tGO:0015238\tPMID:9661020\tISS\t\tF\tNorM\tydhE|norM|NorM|pmpM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1361\tnorM\t\tGO:0015307\tPMID:14679249\tIDA\t\tF\tNorM\tydhE|norM|NorM|pmpM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1361\tnorM\t\tGO:0005886\tPMID:14679249\tIDA\t\tC\tNorM\tydhE|norM|NorM|pmpM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1361\tnorM\t\tGO:0098567\tPMID:14679249\tIDA\t\tC\tNorM\tydhE|norM|NorM|pmpM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1363\tPA1363\t\tGO:0016987\tPMID:18086184\tISS\t\tF\tECF sigma factor\tECF sigma factor|probable sigma-70 factor, ECF subfamily\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1363\tPA1363\t\tGO:0034756\tPMID:18086184\tISS\t\tP\tECF sigma factor\tECF sigma factor|probable sigma-70 factor, ECF subfamily\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1363\tPA1363\t\tGO:0005829\tPMID:18086184\tNAS\t\tC\tECF sigma factor\tECF sigma factor|probable sigma-70 factor, ECF subfamily\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1364\tPA1364\t\tGO:0016989\tPMID:18086184\tNAS\t\tF\tprobable transmembrane sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1365\tPA1365\t\tGO:0038023\tPMID:18086184\tISS\tUniProtKB:D8MZE3\tF\tprobable siderophore receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1365\tPA1365\t\tGO:0015344\tPMID:18086184\tISS\tUniProtKB:D8MZE3\tF\tprobable siderophore receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1365\tPA1365\t\tGO:0007166\tPMID:18086184\tISS\tUniProtKB:D8MZE3\tP\tprobable siderophore receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1365\tPA1365\t\tGO:0015891\tPMID:18086184\tISS\tUniProtKB:D8MZE3\tP\tprobable siderophore receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1365\tPA1365\t\tGO:0019867\tPMID:18086184\tISS\tUniProtKB:D8MZE3\tC\tprobable siderophore receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1373\tfabF2\t\tGO:0004315\tPMID:9013860\tISS\t\tF\t3-oxoacyl-acyl carrier protein synthase II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1375\tpdxB\t\tGO:0033711\tPMID:2681152\tISS\t\tF\terythronate-4-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1375\tpdxB\t\tGO:0008615\tPMID:2681152\tISS\t\tP\terythronate-4-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1375\tpdxB\t\tGO:0042823\tPMID:2681152\tISS\t\tP\terythronate-4-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1375\tpdxB\t\tGO:0051287\tPMID:2681152\tISS\t\tF\terythronate-4-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1384\tgalE\t\tGO:0003978\tPMID:7507102\tISS\t\tF\tUDP-glucose 4-epimerase\tgalactowaldenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1384\tgalE\t\tGO:0033499\tPMID:7507102\tISS\t\tP\tUDP-glucose 4-epimerase\tgalactowaldenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1384\tgalE\t\tGO:0006012\tPMID:7507102\tISS\t\tP\tUDP-glucose 4-epimerase\tgalactowaldenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1384\tgalE\t\tGO:0044248\tPMID:7507102\tISS\t\tP\tUDP-glucose 4-epimerase\tgalactowaldenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1385\tPA1385\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1389\tPA1389\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1391\tPA1391\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1393\tcysC\t\tGO:0004020\tPMID:2828368\tISS\t\tF\tadenosine 5'-phosphosulfate (APS) kinase\tadenylylsulfate kinase|ATP:APS 3'-phosphotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1393\tcysC\t\tGO:0000103\tPMID:2828368\tISS\t\tP\tadenosine 5'-phosphosulfate (APS) kinase\tadenylylsulfate kinase|ATP:APS 3'-phosphotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1393\tcysC\t\tGO:0016301\tPMID:2828368\tISS\t\tF\tadenosine 5'-phosphosulfate (APS) kinase\tadenylylsulfate kinase|ATP:APS 3'-phosphotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1409\taphA\t\tGO:0004040\tPMID:8824626\tISS\t\tF\tacetylpolyamine aminohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1409\taphA\t\tGO:0009446\tPMID:18192388\tISS\t\tP\tacetylpolyamine aminohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1409\taphA\t\tGO:0006595\tPMID:26956223\tIDA\t\tP\tacetylpolyamine aminohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1409\taphA\t\tGO:0016787\tPMID:26956223\tIDA\t\tF\tacetylpolyamine aminohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1421\tgbuA\t\tGO:0047971\tPMID:3141581\tIDA\t\tF\tguanidinobutyrase\tspeB2|agmatinase, agmatine ureohydrolase, AUH, proclavaminate amidino hydrolase, proclavaminic acid amidino hydrolase, PAH|4-guanidinobutanoate amidinohydrolase|guanidinobutyrase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1421\tgbuA\t\tGO:0006527\tPMID:3141581\tIDA\t\tP\tguanidinobutyrase\tspeB2|agmatinase, agmatine ureohydrolase, AUH, proclavaminate amidino hydrolase, proclavaminic acid amidino hydrolase, PAH|4-guanidinobutanoate amidinohydrolase|guanidinobutyrase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1422\tgbuR\t\tGO:0051345\tPMID:12029055\tIMP\t\tP\tGbuR\tgbuR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1422\tgbuR\t\tGO:1900081\tPMID:12029055\tIMP\t\tP\tGbuR\tgbuR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1423\tbdlA\t\tGO:0009405\tPMID:24901523\tIMP\t\tP\tBdlA\tbiofilm dispersion locus A|bdlA|BdlA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1430\tlasR\t\tGO:0051544\tPMID:1902216\tIMP\t\tP\ttranscriptional regulator LasR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1430\tlasR\t\tGO:0009405\tPMID:8454322\tIMP\t\tP\ttranscriptional regulator LasR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1430\tlasR\t\tGO:0003700\tPMID:1902216\tIDA\t\tF\ttranscriptional regulator LasR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1430\tlasR\t\tGO:0060310\tPMID:1902216\tIMP\t\tP\ttranscriptional regulator LasR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1430\tlasR\t\tGO:0006355\tPMID:1902216\tIDA\t\tP\ttranscriptional regulator LasR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1431\trsaL\t\tGO:1900377\tPMID:18045385\tIMP\t\tP\tregulatory protein RsaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1431\trsaL\t\tGO:0060311\tPMID:19878323\tIMP\t\tP\tregulatory protein RsaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1431\trsaL\t\tGO:0051713\tPMID:19878323\tIMP\t\tP\tregulatory protein RsaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1431\trsaL\t\tGO:2000146\tPMID:19878323\tIMP\t\tP\tregulatory protein RsaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1431\trsaL\t\tGO:1900192\tPMID:19878323\tIMP\t\tP\tregulatory protein RsaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1431\trsaL\t\tGO:0003677\tPMID:16385073\tIDA\t\tF\tregulatory protein RsaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1431\trsaL\t\tGO:0006355\tPMID:16385073\tIDA\t\tP\tregulatory protein RsaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1431\trsaL\t\tGO:0009372\tPMID:10094696\tIDA\t\tP\tregulatory protein RsaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1432\tlasI\t\tGO:0007165\tPMID:8493556\tIDA\t\tP\tautoinducer synthesis protein LasI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1443\tfliM\t\tGO:0003774\tPMID:8757287\tISS\t\tF\tflagellar motor switch protein FliM\tflaii protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1443\tfliM\t\tGO:0009425\tPMID:8757287\tISS\t\tC\tflagellar motor switch protein FliM\tflaii protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1443\tfliM\t\tGO:0071973\tPMID:8757287\tISS\t\tP\tflagellar motor switch protein FliM\tflaii protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1447\tfliQ\t\tGO:0016021\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1447\tfliQ\t\tGO:0009306\tPMID:10049367\tISS\t\tP\tflagellar biosynthetic protein FliQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1447\tfliQ\t\tGO:0009288\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1448\tfliR\t\tGO:0016021\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1448\tfliR\t\tGO:0009288\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1448\tfliR\t\tGO:0009306\tPMID:10049367\tISS\t\tP\tflagellar biosynthetic protein FliR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1449\tflhB\t\tGO:0098562\tPMID:8002587\tISS\t\tC\tflagellar biosynthetic protein FlhB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1449\tflhB\t\tGO:0009306\tPMID:10049367\tISS\t\tP\tflagellar biosynthetic protein FlhB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1449\tflhB\t\tGO:0009288\tPMID:10049367\tISS\t\tC\tflagellar biosynthetic protein FlhB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1452\tflhA\t\tGO:0098562\tPMID:8002587\tISS\t\tC\tflagellar biosynthesis protein FlhA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1452\tflhA\t\tGO:0009306\tPMID:10049367\tISS\t\tP\tflagellar biosynthesis protein FlhA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1452\tflhA\t\tGO:0009288\tPMID:10049367\tISS\t\tC\tflagellar biosynthesis protein FlhA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1453\tflhF\t\tGO:0005525\tPMID:1447978\tISS\t\tF\tflagellar biosynthesis protein FlhF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1453\tflhF\t\tGO:0009288\tPMID:1447978\tISS\t\tC\tflagellar biosynthesis protein FlhF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1453\tflhF\t\tGO:0044781\tPMID:17660418\tISS\t\tP\tflagellar biosynthesis protein FlhF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1454\tfleN\t\tGO:0005524\tPMID:10629180\tIDA\t\tF\tflagellar synthesis regulator FleN\tmotR|MotR|fleN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1455\tfliA\t\tGO:2000147\tPMID:1560774\tIMP\t\tP\tsigma factor FliA\trpoF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1456\tcheY\t\tGO:0050920\tPMID:1560774\tISS\t\tP\ttwo-component response regulator CheY\tregulatory component of sensory transduction system for chemotaxis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1456\tcheY\t\tGO:1900192\tPMID:18485000\tIMP\t\tP\ttwo-component response regulator CheY\tregulatory component of sensory transduction system for chemotaxis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1456\tcheY\t\tGO:0000156\tPMID:8104179\tISS\t\tF\ttwo-component response regulator CheY\tregulatory component of sensory transduction system for chemotaxis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1457\tcheZ\t\tGO:0006935\tPMID:7860605\tIMP\t\tP\tchemotaxis protein CheZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1457\tcheZ\t\tGO:0071978\tPMID:7860605\tIMP\t\tP\tchemotaxis protein CheZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1460\tmotC\t\tGO:0071973\tPMID:15375113\tIMP\t\tP\tMotC\tmotA|MotA|motC|MotC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1460\tmotC\t\tGO:0071978\tPMID:15629949\tIMP\t\tP\tMotC\tmotA|MotA|motC|MotC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1461\tmotD\t\tGO:0071973\tPMID:15375113\tIMP\t\tP\tMotD\tmotB|MotB|motD|MotD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1461\tmotD\t\tGO:0071978\tPMID:15629949\tIMP\t\tP\tMotD\tmotB|MotB|motD|MotD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1475\tccmA\t\tGO:0017004\tPMID:7635817\tISS\t\tP\theme exporter protein CcmA\thelA|cycV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1476\tccmB\t\tGO:0017004\tPMID:7635817\tISS\t\tP\theme exporter protein CcmB\thelB|cycW|cyt10\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1477\tccmC\t\tGO:0017004\tPMID:7635817\tISS\t\tP\theme exporter protein CcmC\thelC|cycZ|pfcyt1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1477\tccmC\t\tGO:0002049\tPMID:16824107\tIMP\t\tP\theme exporter protein CcmC\thelC|cycZ|pfcyt1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1477\tccmC\t\tGO:0071978\tPMID:16824107\tIMP\t\tP\theme exporter protein CcmC\thelC|cycZ|pfcyt1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1477\tccmC\t\tGO:0071977\tPMID:16824107\tIMP\t\tP\theme exporter protein CcmC\thelC|cycZ|pfcyt1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1477\tccmC\t\tGO:0043107\tPMID:16824107\tIMP\t\tP\theme exporter protein CcmC\thelC|cycZ|pfcyt1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1477\tccmC\t\tGO:0009247\tPMID:16824107\tIMP\t\tP\theme exporter protein CcmC\thelC|cycZ|pfcyt1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1477\tccmC\t\tGO:0004096\tPMID:16824107\tIMP\t\tF\theme exporter protein CcmC\thelC|cycZ|pfcyt1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1479\tccmE\t\tGO:0017004\tPMID:7635817\tISS\t\tP\tcytochrome C-type biogenesis protein CcmE\tcycJ|pfcyt3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1480\tccmF\t\tGO:0017004\tPMID:7635817\tISS\t\tP\tcytochrome C-type biogenesis protein CcmF\tccl1|cycK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1480\tccmF\t\tGO:0002049\tPMID:16824107\tIMP\t\tP\tcytochrome C-type biogenesis protein CcmF\tccl1|cycK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1480\tccmF\t\tGO:0071978\tPMID:16824107\tIMP\t\tP\tcytochrome C-type biogenesis protein CcmF\tccl1|cycK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1480\tccmF\t\tGO:0071977\tPMID:16824107\tIMP\t\tP\tcytochrome C-type biogenesis protein CcmF\tccl1|cycK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1480\tccmF\t\tGO:0043107\tPMID:16824107\tIMP\t\tP\tcytochrome C-type biogenesis protein CcmF\tccl1|cycK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1480\tccmF\t\tGO:0004096\tPMID:16824107\tIMP\t\tF\tcytochrome C-type biogenesis protein CcmF\tccl1|cycK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1481\tccmG\t\tGO:0017004\tPMID:7635817\tISS\t\tP\tcytochrome C biogenesis protein CcmG\tdsbE|Thiol:disulfide interchange protein DsbE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1482\tccmH\t\tGO:0017004\tPMID:7635817\tISS\t\tP\tcytochrome C-type biogenesis protein CcmH\tcycL|ccl2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1486\tbapF\t\tGO:0004177\tPMID:23728237\tIDA\t\tF\tbeta-peptidyl aminopeptidase\tbeta-peptidyl aminopeptidase|bapF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1493\tcysP\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tsulfate-binding protein of ABC transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1494\tmuiA\t\tGO:0032885\tPMID:24115673\tIMP\t\tP\tmucoidy inhibitor gene A\tmucoidy inhibitor gene A|muiA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1498\tpykF\t\tGO:0004743\tPMID:7559366\tISS\tUniProtKB:P21599\tF\tpyruvate kinase I\tpyk-I|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1498\tpykF\t\tGO:0042866\tPMID:7559366\tISS\t\tP\tpyruvate kinase I\tpyk-I|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1502\tgcl\t\tGO:0009028\tPMID:18176558\tISS\t\tF\tglyoxylate carboligase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1502\tgcl\t\tGO:0030976\tPMID:18176558\tISS\t\tF\tglyoxylate carboligase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1502\tgcl\t\tGO:0009436\tPMID:4892366\tISS\t\tP\tglyoxylate carboligase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1502\tgcl\t\tGO:0046296\tPMID:4892366\tISS\t\tP\tglyoxylate carboligase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1509\ttplEi\t\tGO:0005515\tPMID:27477276\tIPI\tPseudoCAP:PA1510\tF\timmunity protein, TplEi\tTli4|tli4|tplEi|immunity protein, TplEi\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1510\ttplE\t\tGO:0044167\tPMID:27477276\tEXP\t\tC\ttype 6 PGAP1-like effector, TplE\tTle4|tle4|tplE|type 6 PGAP1-like effector, TplE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1510\ttplE\t\tGO:0030968\tPMID:27477276\tEXP\t\tP\ttype 6 PGAP1-like effector, TplE\tTle4|tle4|tplE|type 6 PGAP1-like effector, TplE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1510\ttplE\t\tGO:0006914\tPMID:27477276\tEXP\t\tP\ttype 6 PGAP1-like effector, TplE\tTle4|tle4|tplE|type 6 PGAP1-like effector, TplE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1511\tvgrG2a\t\tGO:0033103\tPMID:21325275\tIGC\t\tP\tVgrG2a\tVgrG2a|vgrG2a\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1511\tvgrG2a\t\tGO:0033104\tPMID:21325275\tIGC\t\tC\tVgrG2a\tVgrG2a|vgrG2a\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1525\talkB2\t\tGO:0018685\tPMID:11872725\tIGI\t\tF\talkane-1-monooxygenase 2\talkB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1525\talkB2\t\tGO:0043448\tPMID:14574114\tIGI\t\tP\talkane-1-monooxygenase 2\talkB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1528\tzipA\t\tGO:0000917\tPMID:9008158\tISS\t\tP\tcell division protein ZipA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1529\tlig\t\tGO:0003911\tPMID:15583169\tISS\t\tF\tDNA ligase\tligA|dnaL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1529\tlig\t\tGO:0006259\tPMID:15583169\tISS\t\tP\tDNA ligase\tligA|dnaL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1530.1\tffs\t\tGO:0048500\tPMID:12140321\tISS\tRefSeq:NC_000913.3\tC\t4.5S RNA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1532\tdnaX\t\tGO:0043846\tPMID:15611049\tIDA\t\tC\tDNA polymerase subunits gamma and tau\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1532\tdnaX\t\tGO:0006260\tPMID:15611049\tIDA\t\tP\tDNA polymerase subunits gamma and tau\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1532\tdnaX\t\tGO:0030337\tPMID:7494000\tISS\t\tF\tDNA polymerase subunits gamma and tau\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1534\trecR\t\tGO:0000731\tPMID:9108043\tISS\t\tP\trecombination protein RecR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1534\trecR\t\tGO:0009411\tPMID:9108043\tISS\t\tP\trecombination protein RecR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1535\tPA1535\t\tGO:0034824\tPMID:18310025\tIDA\t\tF\tcitronellyl-CoA dehydrogenase\tcitronellyl-CoA dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1535\tPA1535\t\tGO:0034824\tPMID:20490788\tIDA\t\tF\tcitronellyl-CoA dehydrogenase\tcitronellyl-CoA dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1535\tPA1535\t\tGO:0046247\tPMID:20490788\tIDA\t\tP\tcitronellyl-CoA dehydrogenase\tcitronellyl-CoA dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1543\tapt\t\tGO:0003999\tPMID:4328693\tISS\t\tF\tadenine phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1543\tapt\t\tGO:0006168\tPMID:4328693\tISS\t\tP\tadenine phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1543\tapt\t\tGO:0005829\tPMID:16858726\tISS\t\tC\tadenine phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1543\tapt\t\tGO:0042802\tPMID:4328693\tISS\t\tF\tadenine phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1543\tapt\t\tGO:0000287\tPMID:4328693\tISS\t\tF\tadenine phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:1900081\tPMID:1900277\tIMP\t\tP\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:0044212\tPMID:1900277\tIDA\t\tF\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:0051353\tPMID:9767567\tIMP\t\tP\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:0036294\tPMID:1787798\tIMP\t\tP\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:0046202\tPMID:1787798\tIMP\t\tP\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:1900275\tPMID:25073853\tIMP\t\tP\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:0006355\tPMID:20553552\tIMP\t\tP\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:0006355\tPMID:1900277\tIMP\t\tP\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:0036293\tPMID:7768875\tIDA\t\tP\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1546\themN\t\tGO:0004109\tPMID:9767567\tIGI\t\tF\toxygen-independent coproporphyrinogen III oxidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1552\tccoP1\t\tGO:0004129\tPMID:14763990\tIMP\t\tF\tCytochrome c oxidase, cbb3-type, CcoP subunit\tccoP1|Cytochrome c oxidase, cbb3-type, CcoP subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1553\tccoO1\t\tGO:0004129\tPMID:14763990\tIMP\t\tF\tCytochrome c oxidase, cbb3-type, CcoO subunit\tfixO|ccoO|ccoO1|Cytochrome c oxidase, cbb3-type, CcoO subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1554\tccoN1\t\tGO:0004129\tPMID:14763990\tIMP\t\tF\tCytochrome c oxidase, cbb3-type, CcoN subunit\tccoN|fixN|cytN|cytochrome c oxidase polypeptide I homolog (heme b/copper cytochrome c oxidase subunit)|ccoN1|Cytochrome c oxidase, cbb3-type, CcoN subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1555\tccoP2\t\tGO:0004129\tPMID:14763990\tIMP\t\tF\tCytochrome c oxidase, cbb3-type, CcoP subunit\tccoP|fixP|ccoP2|Cytochrome c oxidase, cbb3-type, CcoP subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1556\tccoO2\t\tGO:0004129\tPMID:14763990\tIMP\t\tF\tCytochrome c oxidase, cbb3-type, CcoO subunit\tccoO|fixO|ccoO2|Cytochrome c oxidase, cbb3-type, CcoO subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1557\tccoN2\t\tGO:0004129\tPMID:14763990\tIMP\t\tF\tCytochrome c oxidase, cbb3-type, CcoN subunit\tccoN|fixN|cytN|cytochrome c oxidase poly peptide I homolog (heme b/copper cytochrome c oxidase sub unit)|ccoN2|Cytochrome c oxidase, cbb3-type, CcoN subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1561\taer\t\tGO:0009454\tPMID:14987771\tIMP\t\tP\taerotaxis receptor Aer\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1562\tacnA\t\tGO:0009061\tPMID:12486059\tISS\tUniProtKB:P25516\tP\taconitate hydratase 1\tacn|aconitase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1562\tacnA\t\tGO:0006979\tPMID:12486059\tISS\tUniProtKB:P25516\tP\taconitate hydratase 1\tacn|aconitase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1562\tacnA\t\tGO:0005737\tPMID:12486059\tISS\tUniProtKB:P25516\tC\taconitate hydratase 1\tacn|aconitase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1562\tacnA\t\tGO:0003994\tPMID:7588761\tISS\tUniProtKB:P25516\tF\taconitate hydratase 1\tacn|aconitase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1562\tacnA\t\tGO:0005506\tPMID:12486059\tISS\tUniProtKB:P25516\tF\taconitate hydratase 1\tacn|aconitase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1562\tacnA\t\tGO:0051539\tPMID:7588761\tISS\tUniProtKB:P25516\tF\taconitate hydratase 1\tacn|aconitase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1565\tpauB2\t\tGO:0006598\tPMID:21622750\tIMP\t\tP\tFAD-dependent oxidoreductase\tFAD-dependent oxidoreductase|pauB2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1566\tpauA3\t\tGO:0006598\tPMID:21622750\tIMP\t\tP\tGlutamylpolyamine synthetase\tGlutamylpolyamine synthetase|pauA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1580\tgltA\t\tGO:0036440\tPMID:7626013\tIDA\t\tF\tcitrate synthase\tcisY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1580\tgltA\t\tGO:0045239\tPMID:7626013\tIDA\t\tC\tcitrate synthase\tcisY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1580\tgltA\t\tGO:0006099\tPMID:7626013\tIDA\t\tP\tcitrate synthase\tcisY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1581\tsdhC\t\tGO:0008177\tPMID:9822661\tISS\t\tF\tsuccinate dehydrogenase (C subunit)\tcybA|succinate dehydrogenase (cytochrome b-556 subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1581\tsdhC\t\tGO:0009055\tPMID:12788489\tISS\t\tF\tsuccinate dehydrogenase (C subunit)\tcybA|succinate dehydrogenase (cytochrome b-556 subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1581\tsdhC\t\tGO:0020037\tPMID:9521736\tISS\t\tF\tsuccinate dehydrogenase (C subunit)\tcybA|succinate dehydrogenase (cytochrome b-556 subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1581\tsdhC\t\tGO:0048039\tPMID:9822661\tISS\t\tF\tsuccinate dehydrogenase (C subunit)\tcybA|succinate dehydrogenase (cytochrome b-556 subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1581\tsdhC\t\tGO:0017004\tPMID:9521736\tISS\t\tP\tsuccinate dehydrogenase (C subunit)\tcybA|succinate dehydrogenase (cytochrome b-556 subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1582\tsdhD\t\tGO:0017004\tPMID:9521736\tISS\t\tP\tsuccinate dehydrogenase (D subunit)\tsuccinate dehydrogenase hydrophobic membrane anchor protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1582\tsdhD\t\tGO:0009055\tPMID:12788489\tISS\t\tF\tsuccinate dehydrogenase (D subunit)\tsuccinate dehydrogenase hydrophobic membrane anchor protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1582\tsdhD\t\tGO:0020037\tPMID:9521736\tISS\t\tF\tsuccinate dehydrogenase (D subunit)\tsuccinate dehydrogenase hydrophobic membrane anchor protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1583\tsdhA\t\tGO:0006099\tPMID:15543598\tISS\t\tP\tsuccinate dehydrogenase (A subunit)\tsuccinate dehydrogenase (flavoprotein subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1583\tsdhA\t\tGO:0009055\tPMID:12788489\tISS\t\tF\tsuccinate dehydrogenase (A subunit)\tsuccinate dehydrogenase (flavoprotein subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1583\tsdhA\t\tGO:0000104\tPMID:6383359\tISS\t\tF\tsuccinate dehydrogenase (A subunit)\tsuccinate dehydrogenase (flavoprotein subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1584\tsdhB\t\tGO:0009055\tPMID:16864590\tISS\tUniProtKB:P07014\tF\tsuccinate dehydrogenase (B subunit)\tsuccinate dehydrogenase iron-sulfur protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1584\tsdhB\t\tGO:0051539\tPMID:3008846\tISS\tUniProtKB:P07014\tF\tsuccinate dehydrogenase (B subunit)\tsuccinate dehydrogenase iron-sulfur protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1584\tsdhB\t\tGO:0051538\tPMID:2987254\tISS\tUniProtKB:P07014\tF\tsuccinate dehydrogenase (B subunit)\tsuccinate dehydrogenase iron-sulfur protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1584\tsdhB\t\tGO:0051537\tPMID:1312028\tISS\tUniProtKB:P07014\tF\tsuccinate dehydrogenase (B subunit)\tsuccinate dehydrogenase iron-sulfur protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1584\tsdhB\t\tGO:0051536\tPMID:2997176\tISS\tUniProtKB:P07014\tF\tsuccinate dehydrogenase (B subunit)\tsuccinate dehydrogenase iron-sulfur protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1585\tsucA\t\tGO:0004591\tPMID:17367808\tISS\t\tF\t2-oxoglutarate dehydrogenase (E1 subunit)\talpha-ketoglutarate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1585\tsucA\t\tGO:0006099\tPMID:6284701\tISS\t\tP\t2-oxoglutarate dehydrogenase (E1 subunit)\talpha-ketoglutarate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1586\tsucB\t\tGO:0006099\tPMID:6284701\tISS\t\tP\tdihydrolipoamide succinyltransferase (E2 subunit)\t2-oxoglutarate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1586\tsucB\t\tGO:0004149\tPMID:5335914\tISS\t\tF\tdihydrolipoamide succinyltransferase (E2 subunit)\t2-oxoglutarate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1586\tsucB\t\tGO:0045252\tPMID:5335914\tISS\t\tC\tdihydrolipoamide succinyltransferase (E2 subunit)\t2-oxoglutarate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1587\tlpd\t\tGO:0009405\tPMID:23071278\tIDA\t\tP\tdihydrolipoamide dehydrogenase Lpd\tlpdA|LPD-GLC, L-factor for glycine oxidation system|dihydrolipoamide dehydrogenase (E3 subunit)|dihydrolipoamide dehydrogenase Lpd|lpd\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1587\tlpd\t\tGO:0020012\tPMID:23071278\tIDA\t\tP\tdihydrolipoamide dehydrogenase Lpd\tlpdA|LPD-GLC, L-factor for glycine oxidation system|dihydrolipoamide dehydrogenase (E3 subunit)|dihydrolipoamide dehydrogenase Lpd|lpd\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1588\tsucC\t\tGO:0046777\tPMID:10671455\tIDA\t\tP\tsuccinyl-CoA synthetase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1588\tsucC\t\tGO:0009142\tPMID:10671455\tIDA\t\tP\tsuccinyl-CoA synthetase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1588\tsucC\t\tGO:0004775\tPMID:10671455\tIDA\t\tF\tsuccinyl-CoA synthetase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1588\tsucC\t\tGO:0004550\tPMID:10671455\tIDA\t\tF\tsuccinyl-CoA synthetase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1588\tsucC\t\tGO:0042709\tPMID:10671455\tIDA\t\tC\tsuccinyl-CoA synthetase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1589\tsucD\t\tGO:0009142\tPMID:10671455\tIDA\t\tP\tsuccinyl-CoA synthetase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1589\tsucD\t\tGO:0004775\tPMID:10671455\tIDA\t\tF\tsuccinyl-CoA synthetase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1589\tsucD\t\tGO:0004550\tPMID:10671455\tIDA\t\tF\tsuccinyl-CoA synthetase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1589\tsucD\t\tGO:0042709\tPMID:10671455\tIDA\t\tC\tsuccinyl-CoA synthetase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1590\tbraB\t\tGO:0015803\tPMID:1544899\tIDA\t\tP\tbranched chain amino acid transporter\tBraB protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1609\tfabB\t\tGO:0004315\tPMID:7002930\tISS\t\tF\tbeta-ketoacyl-ACP synthase I\tFabB|KAS I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1609\tfabB\t\tGO:0006636\tPMID:9286984\tIMP\t\tP\tbeta-ketoacyl-ACP synthase I\tFabB|KAS I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1610\tfabA\t\tGO:0008693\tPMID:8910376\tISS\t\tF\tbeta-hydroxydecanoyl-ACP dehydrase\tFabA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1610\tfabA\t\tGO:0006636\tPMID:9286984\tIMP\t\tP\tbeta-hydroxydecanoyl-ACP dehydrase\tFabA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1611\tPA1611\t\tGO:0000155\tPMID:16182517\tIDA\t\tF\thybrid sensor kinase\thybrid sensor kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1614\tgpsA\t\tGO:0047952\tPMID:355254\tISS\t\tF\tglycerol-3-phosphate dehydrogenase, biosynthetic\tgpdA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1614\tgpsA\t\tGO:0046474\tPMID:4591941\tISS\t\tP\tglycerol-3-phosphate dehydrogenase, biosynthetic\tgpdA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1632\tkdpF\t\tGO:0031004\tPMID:9789555\tISS\t\tC\tKdpF protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1632\tkdpF\t\tGO:0008556\tPMID:9789555\tISS\t\tF\tKdpF protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1632\tkdpF\t\tGO:0006813\tPMID:9789555\tISS\t\tP\tKdpF protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1633\tkdpA\t\tGO:0031004\tPMID:9789555\tISS\t\tC\tpotassium-transporting ATPase, A chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1633\tkdpA\t\tGO:0008556\tPMID:9789555\tISS\t\tF\tpotassium-transporting ATPase, A chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1633\tkdpA\t\tGO:0006813\tPMID:9789555\tISS\t\tP\tpotassium-transporting ATPase, A chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1634\tkdpB\t\tGO:0031004\tPMID:9789555\tISS\t\tC\tpotassium-transporting ATPase, B chain\tatkB|P-type ATPase potassium ion transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1634\tkdpB\t\tGO:0008556\tPMID:9789555\tISS\t\tF\tpotassium-transporting ATPase, B chain\tatkB|P-type ATPase potassium ion transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1634\tkdpB\t\tGO:0006813\tPMID:9789555\tISS\t\tP\tpotassium-transporting ATPase, B chain\tatkB|P-type ATPase potassium ion transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1635\tkdpC\t\tGO:0031004\tPMID:9789555\tISS\t\tC\tpotassium-transporting ATPase, C chain\tatkC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1635\tkdpC\t\tGO:0008556\tPMID:9789555\tISS\t\tF\tpotassium-transporting ATPase, C chain\tatkC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1635\tkdpC\t\tGO:0006813\tPMID:9789555\tISS\t\tP\tpotassium-transporting ATPase, C chain\tatkC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1636\tkdpD\t\tGO:0000155\tPMID:8276778\tISS\t\tF\ttwo-component sensor KdpD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1636\tkdpD\t\tGO:0007234\tPMID:8276778\tISS\t\tP\ttwo-component sensor KdpD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1637\tkdpE\t\tGO:0000160\tPMID:8437514\tISS\t\tP\ttwo-component response regulator KdpE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1642\tselD\t\tGO:0070329\tPMID:2405383\tISS\tUniProtKB:P16456\tP\tselenophosphate synthetase\tselenide,water dikinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1642\tselD\t\tGO:0016260\tPMID:2405383\tISS\tUniProtKB:P16456\tP\tselenophosphate synthetase\tselenide,water dikinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1642\tselD\t\tGO:0000287\tPMID:22081394\tISS\tUniProtKB:P16456\tF\tselenophosphate synthetase\tselenide,water dikinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1642\tselD\t\tGO:0004756\tPMID:1606960\tISS\tUniProtKB:P16456\tF\tselenophosphate synthetase\tselenide,water dikinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1656\thsiA2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tHsiA2\tHsiA2|hsiA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1657\thsiB2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tHsiB2\tHsiB2|hsiB2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1657\thsiB2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tHsiB2\tHsiB2|hsiB2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1658\thsiC2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tHsiC2\tHsiC2|hsiC2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1659\thsiF2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tHsiF2\tHsiF2|hsiF2|tssE2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1659\thsiF2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tHsiF2\tHsiF2|hsiF2|tssE2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1660\thsiG2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tHsiG2\tHsiG2|hsiG2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1660\thsiG2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tHsiG2\tHsiG2|hsiG2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1661\thsiH2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tHsiH2\tHsiH2|hsiH2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1661\thsiH2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tHsiH2\tHsiH2|hsiH2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1662\tclpV2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tclpV2\tclpV2|clpV2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1663\tsfa2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tSfa2\tSfa2|sfa2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1664\torfX\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tOrfX\tOrfX|orfX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1665\tfha2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tFha2\tFha2|fha2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1665\tfha2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tFha2\tFha2|fha2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1666\tlip2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tLip2\tLip2|lip2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1666\tlip2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tLip2\tLip2|lip2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1667\thsiJ2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tHsiJ2\tHsiJ2|hsiJ2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1667\thsiJ2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tHsiJ2\tHsiJ2|hsiJ2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1668\tdotU2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tDotU2\tDotU2|dotU2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1669\ticmF2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tIcmF2\tIcmF2|icmF2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1669\ticmF2\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tIcmF2\tIcmF2|icmF2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1670\tstp1\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tStp1\tStp1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1671\tstk1\t\tGO:0033103\tPMID:18524912\tIGC\t\tP\tStk1\tStk1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1674\tfolE2\t\tGO:0008616\tPMID:18931107\tISS\t\tP\tGTP cyclohydrolase I precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1674\tfolE2\t\tGO:0003934\tPMID:8618856\tISS\t\tF\tGTP cyclohydrolase I precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1686\talkA\t\tGO:0003905\tPMID:7982966\tISS\t\tF\tDNA-3-methyladenine glycosidase II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1686\talkA\t\tGO:0006284\tPMID:7982966\tISS\t\tP\tDNA-3-methyladenine glycosidase II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1686\talkA\t\tGO:0006307\tPMID:3536857\tISS\t\tP\tDNA-3-methyladenine glycosidase II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1694\tpscQ\t\tGO:0030254\tPMID:22320351\tISS\tUniProtKB:P42713\tP\ttranslocation protein in type III secretion\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1695\tpscP\t\tGO:0030254\tPMID:10217778\tISS\tUniProtKB:P68587\tP\ttranslocation protein in type III secretion\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1696\tpscO\t\tGO:0030254\tPMID:9683485\tISS\tUniProtKB:O30878\tP\ttranslocation protein in type III secretion\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1698\tpopN\t\tGO:0050709\tPMID:15619427\tIMP\t\tP\tType III secretion outer membrane protein PopN precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1698\tpopN\t\tGO:0030254\tPMID:17237176\tIMP\t\tP\tType III secretion outer membrane protein PopN precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1698\tpopN\t\tGO:0005515\tPMID:17237176\tIPI\tPseudoCAP:PA1699\tF\tType III secretion outer membrane protein PopN precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1699\tpcr1\t\tGO:0050709\tPMID:17237176\tIMP\t\tP\tPcr1\tpcr1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1699\tpcr1\t\tGO:0030254\tPMID:17237176\tIMP\t\tP\tPcr1\tpcr1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1699\tpcr1\t\tGO:0005515\tPMID:17237176\tIPI\tPseudoCAP:PA1698\tF\tPcr1\tpcr1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1699\tpcr1\t\tGO:0005515\tPMID:17237176\tIPI\tPseudoCAP:PA1702\tF\tPcr1\tpcr1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1700\tpcr2\t\tGO:0030254\tPMID:17237176\tIMP\t\tP\tPcr2\tpcr2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1701\tpcr3\t\tGO:0030254\tPMID:17237176\tIMP\t\tP\tPcr3\tpcr3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1701\tpcr3\t\tGO:0005515\tPMID:17237176\tIPI\tPseudoCAP:PA1702\tF\tPcr3\tpcr3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1702\tpcr4\t\tGO:0030254\tPMID:17237176\tIMP\t\tP\tPcr4\tpcr4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1702\tpcr4\t\tGO:0030254\tPMID:17237176\tIMP\t\tP\tPcr4\tpcr4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1702\tpcr4\t\tGO:0005515\tPMID:17237176\tIPI\tPseudoCAP:PA1701\tF\tPcr4\tpcr4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1702\tpcr4\t\tGO:0005515\tPMID:17237176\tIPI\tPseudoCAP:PA1699\tF\tPcr4\tpcr4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1703\tpcrD\t\tGO:0050709\tPMID:11095918\tIMP\t\tP\ttype III secretory apparatus protein PcrD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1704\tpcrR\t\tGO:0006355\tPMID:1695896\tISS\t\tP\ttranscriptional regulator protein PcrR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1704\tpcrR\t\tGO:0071277\tPMID:1695896\tISS\t\tP\ttranscriptional regulator protein PcrR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1705\tpcrG\t\tGO:0050709\tPMID:15619427\tIMP\t\tP\tregulator in type III secretion\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1706\tpcrV\t\tGO:0030254\tPMID:21479247\tIMP\t\tP\ttype III secretion protein PcrV\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1706\tpcrV\t\tGO:0030257\tPMID:21479247\tIDA\t\tC\ttype III secretion protein PcrV\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1706\tpcrV\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\ttype III secretion protein PcrV\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1707\tpcrH\t\tGO:0030254\tPMID:14673772\tIMP\t\tP\tregulatory protein PcrH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1707\tpcrH\t\tGO:0051131\tPMID:14673772\tIMP\t\tP\tregulatory protein PcrH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1708\tpopB\t\tGO:0051087\tPMID:12654846\tIDA\t\tF\ttranslocator protein PopB\tpepB|PepB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1708\tpopB\t\tGO:0042000\tPMID:9767584\tIGI\t\tP\ttranslocator protein PopB\tpepB|PepB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1709\tpopD\t\tGO:0051087\tPMID:12654846\tIDA\t\tF\tTranslocator outer membrane protein PopD precursor\tpepD|PepD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1709\tpopD\t\tGO:0042000\tPMID:9767584\tIGI\t\tP\tTranslocator outer membrane protein PopD precursor\tpepD|PepD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1710\texsC\t\tGO:0030254\tPMID:15225323\tIMP\t\tP\tExsC, exoenzyme S synthesis protein C precursor.\tS synthesis trans-regulatory protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1710\texsC\t\tGO:0045893\tPMID:15225323\tIMP\t\tP\tExsC, exoenzyme S synthesis protein C precursor.\tS synthesis trans-regulatory protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1711\texsE\t\tGO:0051087\tPMID:20536183\tIDA\t\tF\tExsE\texsE|ExsE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1711\texsE\t\tGO:0030254\tPMID:15911752\tIMP\t\tP\tExsE\texsE|ExsE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1711\texsE\t\tGO:0071277\tPMID:15911752\tIDA\t\tP\tExsE\texsE|ExsE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1711\texsE\t\tGO:0050709\tPMID:15911752\tIMP\t\tP\tExsE\texsE|ExsE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1713\texsA\t\tGO:0006355\tPMID:7635828\tIDA\t\tP\ttranscriptional regulator ExsA\tS synthesis trans-regulatory protein ExsA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1713\texsA\t\tGO:0044212\tPMID:7635828\tIDA\t\tF\ttranscriptional regulator ExsA\tS synthesis trans-regulatory protein ExsA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1713\texsA\t\tGO:0050709\tPMID:1655713\tIMP\t\tP\ttranscriptional regulator ExsA\tS synthesis trans-regulatory protein ExsA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1714\texsD\t\tGO:0050709\tPMID:12421316\tIMP\t\tP\tExsD\texsD|ExsD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1714\texsD\t\tGO:0045892\tPMID:12421316\tIMP\t\tP\tExsD\texsD|ExsD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1714\texsD\t\tGO:0043392\tPMID:20008065\tIDA\t\tP\tExsD\texsD|ExsD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1714\texsD\t\tGO:0032091\tPMID:20008065\tIDA\t\tP\tExsD\texsD|ExsD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1714\texsD\t\tGO:0071277\tPMID:12421316\tIMP\t\tP\tExsD\texsD|ExsD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1715\tpscB\t\tGO:0030254\tPMID:8971719\tIGC\t\tP\ttype III export apparatus protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1716\tpscC\t\tGO:0030254\tPMID:8971719\tIMP\t\tP\tType III secretion outer membrane protein PscC precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1717\tpscD\t\tGO:0030254\tPMID:8971719\tIGC\t\tP\ttype III export protein PscD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1718\tpscE\t\tGO:0030254\tPMID:8971719\tIGC\t\tP\ttype III export protein PscE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1719\tpscF\t\tGO:0030254\tPMID:8971719\tIGC\t\tP\ttype III export protein PscF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1719\tpscF\t\tGO:0030257\tPMID:16239085\tIDA\t\tC\ttype III export protein PscF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1719\tpscF\t\tGO:0030254\tPMID:16239085\tIDA\t\tP\ttype III export protein PscF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1720\tpscG\t\tGO:0030254\tPMID:8971719\tIGC\t\tP\ttype III export protein PscG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1721\tpscH\t\tGO:0030254\tPMID:8971719\tIGC\t\tP\ttype III export protein PscH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1722\tpscI\t\tGO:0030254\tPMID:8971719\tIGC\t\tP\ttype III export protein PscI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1723\tpscJ\t\tGO:0030254\tPMID:8971719\tIGC\t\tP\ttype III export protein PscJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1724\tpscK\t\tGO:0030254\tPMID:8971719\tIGC\t\tP\ttype III export protein PscK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1725\tpscL\t\tGO:0030254\tPMID:8971719\tIGC\t\tP\ttype III export protein PscL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1726\tbglX\t\tGO:0008422\tPMID:8757730\tISS\t\tF\tperiplasmic beta-glucosidase\tgentobiase|cellobiase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1726\tbglX\t\tGO:0015926\tPMID:8757730\tISS\t\tF\tperiplasmic beta-glucosidase\tgentobiase|cellobiase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1726\tbglX\t\tGO:0042597\tPMID:8757730\tISS\t\tC\tperiplasmic beta-glucosidase\tgentobiase|cellobiase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1727\tmucR\t\tGO:0052621\tPMID:23729646\tIDA\t\tF\tMucR\tmucR|MucR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1727\tmucR\t\tGO:0071111\tPMID:23729646\tIDA\t\tF\tMucR\tmucR|MucR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1727\tmucR\t\tGO:0052621\tPMID:16477007\tIDA\t\tF\tMucR\tmucR|MucR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1727\tmucR\t\tGO:0071732\tPMID:23729646\tIMP\t\tP\tMucR\tmucR|MucR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1727\tmucR\t\tGO:0071111\tPMID:23729646\tIDA\t\tF\tMucR\tmucR|MucR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1750\tPA1750\t\tGO:0009073\tPMID:15575692\tISS\tUniProtKB:P00888\tP\tphospho-2-dehydro-3-deoxyheptonate aldolase\t3-deoxy-d-arabino-heptulosonate 7-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1750\tPA1750\t\tGO:0003849\tPMID:9387\tISS\t\tF\tphospho-2-dehydro-3-deoxyheptonate aldolase\t3-deoxy-d-arabino-heptulosonate 7-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1750\tPA1750\t\tGO:0042802\tPMID:9387\tISS\t\tF\tphospho-2-dehydro-3-deoxyheptonate aldolase\t3-deoxy-d-arabino-heptulosonate 7-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1754\tcysB\t\tGO:0019344\tPMID:9218775\tIMP\t\tP\ttranscriptional regulator CysB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1754\tcysB\t\tGO:0045893\tPMID:20370820\tIDA\t\tP\ttranscriptional regulator CysB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1754\tcysB\t\tGO:0044212\tPMID:20370820\tIDA\t\tF\ttranscriptional regulator CysB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1756\tcysH\t\tGO:0009973\tPMID:10613872\tIGI\t\tF\t3'-phosphoadenosine-5'-phosphosulfate reductase\tPAPS reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1756\tcysH\t\tGO:0000103\tPMID:10613872\tIMP\t\tP\t3'-phosphoadenosine-5'-phosphosulfate reductase\tPAPS reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1757\tthrH\t\tGO:0006564\tPMID:10220164\tIGI\t\tP\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1757\tthrH\t\tGO:0009088\tPMID:10220164\tIGI\t\tP\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1757\tthrH\t\tGO:0004413\tPMID:10220164\tIGI\t\tF\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1757\tthrH\t\tGO:0004647\tPMID:10220164\tIGI\t\tF\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1757\tthrH\t\tGO:0043899\tPMID:14699121\tIDA\t\tF\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1757\tthrH\t\tGO:0009088\tPMID:10220164\tIMP\t\tP\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1757\tthrH\t\tGO:0046654\tPMID:16605270\tISS\tUniProtKB:P05041\tP\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1757\tthrH\t\tGO:0046820\tPMID:2251281\tISS\tUniProtKB:P05041\tF\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1757\tthrH\t\tGO:0000287\tPMID:2251281\tISS\tUniProtKB:P05041\tF\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1770\tppsA\t\tGO:0004743\tPMID:1310524\tISS\t\tF\tphosphoenolpyruvate synthase\twater dikinase|PEP synthase|Pyruvate\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1770\tppsA\t\tGO:0006094\tPMID:4383555\tISS\tUniProtKB:P23538\tP\tphosphoenolpyruvate synthase\twater dikinase|PEP synthase|Pyruvate\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1776\tsigX\t\tGO:0016987\tPMID:10438740\tIDA\t\tF\tECF sigma factor SigX\tsigX|ECF sigma factor, SigX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1776\tsigX\t\tGO:0030307\tPMID:10438740\tIMP\t\tP\tECF sigma factor SigX\tsigX|ECF sigma factor, SigX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1777\toprF\t\tGO:0015288\tPMID:2836364\tTAS\t\tF\tMajor porin and structural outer membrane porin OprF precursor\tPorin F\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1777\toprF\t\tGO:0019867\tPMID:2836364\tTAS\t\tC\tMajor porin and structural outer membrane porin OprF precursor\tPorin F\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1777\toprF\t\tGO:0044406\tPMID:21189321\tIMP\t\tP\tMajor porin and structural outer membrane porin OprF precursor\tPorin F\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1777\toprF\t\tGO:0001851\tPMID:25964476\tIPI\tUniProtKB:P01024\tF\tMajor porin and structural outer membrane porin OprF precursor\tPorin F\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1779\tPA1779\t\tGO:0008940\tPMID:8468296\tISS\t\tF\tassimilatory nitrate reductase\tnasC|nasA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1780\tnirD\t\tGO:0006783\tPMID:8982003\tIMP\t\tP\tassimilatory nitrite reductase small subunit\tnasE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1781\tnirB\t\tGO:0009703\tPMID:11004182\tISS\t\tF\tassimilatory nitrite reductase large subunit\tnasD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1785\tnasT\t\tGO:0031564\tPMID:22493305\tISS\t\tP\tNasT\tnasT|NasT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1785\tnasT\t\tGO:0090352\tPMID:22493305\tIMP\t\tP\tNasT\tnasT|NasT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1787\tacnB\t\tGO:0003994\tPMID:8000525\tISS\t\tF\taconitate hydratase 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1793\tppiB\t\tGO:0016859\tPMID:1606970\tISS\t\tF\tpeptidyl-prolyl cis-trans isomerase B\tcypB|PPIase B|Rotamase B\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1796\tfolD\t\tGO:0019238\tPMID:1748668\tISS\t\tF\t5,10-methylene-tetrahydrofolate dehydrogenase / cyclohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1796\tfolD\t\tGO:0003959\tPMID:1748668\tISS\t\tF\t5,10-methylene-tetrahydrofolate dehydrogenase / cyclohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1798\tparS\t\tGO:0000155\tPMID:20547815\tIMP\t\tF\ttwo-component sensor, ParS\tparS|two-component sensor, ParS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1799\tparR\t\tGO:0000156\tPMID:20547815\tIMP\t\tF\ttwo-component response regulator, ParR\tparR|two-component response regulator, ParR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1799\tparR\t\tGO:0071073\tPMID:20547815\tIMP\t\tP\ttwo-component response regulator, ParR\tparR|two-component response regulator, ParR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1801\tclpP\t\tGO:0071978\tPMID:22123702\tIMP\t\tP\tClpP\tprotease ti\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1801\tclpP\t\tGO:0071236\tPMID:22123702\tIMP\t\tP\tClpP\tprotease ti\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1801\tclpP\t\tGO:0044010\tPMID:22123702\tIMP\t\tP\tClpP\tprotease ti\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1801\tclpP\t\tGO:0044011\tPMID:22123702\tIMP\t\tP\tClpP\tprotease ti\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1801\tclpP\t\tGO:0008233\tPMID:8831780\tISS\t\tF\tClpP\tprotease ti\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0071236\tPMID:17259618\tIMP\t\tP\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0044010\tPMID:17259618\tIMP\t\tP\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0071978\tPMID:17259618\tIMP\t\tP\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0043107\tPMID:17259618\tIMP\t\tP\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0071977\tPMID:17259618\tIMP\t\tP\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0004176\tPMID:8294008\tISS\t\tF\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0042493\tPMID:17893152\tIMP\t\tP\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0009405\tPMID:23145092\tIMP\t\tP\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0030254\tPMID:23145092\tIMP\t\tP\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1804\thupB\t\tGO:0008301\tPMID:2265752\tISS\t\tF\tDNA-binding protein HU\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1805\tppiD\t\tGO:0003755\tPMID:20920237\tISS\t\tF\tpeptidyl-prolyl cis-trans isomerase D\tPPIase D|Rotamase D\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1806\tfabI\t\tGO:0016631\tPMID:10464225\tIDA\t\tF\tNADH-dependent enoyl-ACP reductase\tenvM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1807\tnppD\t\tGO:0006857\tPMID:23979749\tIMP\t\tP\tNppD\tnppD|NppD|probable ATP-binding component of ABC transporter|oppE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1807\tnppD\t\tGO:0015198\tPMID:23979749\tIMP\t\tF\tNppD\tnppD|NppD|probable ATP-binding component of ABC transporter|oppE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1808\tnppC\t\tGO:0006857\tPMID:23979749\tIGC\t\tP\tNppC\tnppC|NppC|probable permease of ABC transporter|oppD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1809\tnppB\t\tGO:0006857\tPMID:23979749\tIGC\t\tP\tNppB\tnppB|NppB|probable permease of ABC transporter|oppC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1810\tnppA2\t\tGO:0006857\tPMID:23979749\tIMP\t\tP\tNppA2\tnppA2|NppA2|probable binding protein component of ABC transporter|oppB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1810\tnppA2\t\tGO:0015198\tPMID:23979749\tIMP\t\tF\tNppA2\tnppA2|NppA2|probable binding protein component of ABC transporter|oppB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1811\tnppA1\t\tGO:0006857\tPMID:23979749\tIMP\t\tP\tNppA1\tnppA1|NppA1|probable solute-binding protein|oppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1811\tnppA1\t\tGO:0015198\tPMID:23979749\tIMP\t\tF\tNppA1\tnppA1|NppA1|probable solute-binding protein|oppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1815\trnhA\t\tGO:0004523\tPMID:2171503\tISS\t\tF\tribonuclease H\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1816\tdnaQ\t\tGO:0043845\tPMID:9705512\tISS\t\tC\tDNA polymerase III, epsilon chain\tmutD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1820\tnhaB\t\tGO:0015385\tPMID:1317851\tISS\t\tF\tsodium/proton antiporter NhaB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1823\tnudC\t\tGO:0016787\tPMID:24989777\tIMP\t\tF\tNudC\tyjaD|nudC|NudC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1838\tcysI\t\tGO:0009970\tPMID:9611812\tIDA\t\tP\tsulfite reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1843\tmetH\t\tGO:0008705\tPMID:11479715\tISS\t\tF\tmethionine synthase\t5-methyltetrahydrofolate--homocysteine S-methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1844\ttse1\t\tGO:0004040\tPMID:21776080\tIDA\t\tF\tTse1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1861\tmodC\t\tGO:0015412\tPMID:8564363\tISS\t\tF\tmolybdenum transport protein ModC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1862\tmodB\t\tGO:0015098\tPMID:8564363\tISS\t\tF\tmolybdenum transport protein ModB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1863\tmodA\t\tGO:0030973\tPMID:8564363\tISS\t\tF\tmolybdate-binding periplasmic protein precursor ModA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1867\txphA\t\tGO:0015627\tPMID:17351035\tIDA\t\tC\tXphA\txphA|XphA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1868\txqhA\t\tGO:0015627\tPMID:17351035\tIDA\t\tC\tsecretion protein XqhA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1871\tlasA\t\tGO:0004175\tPMID:9642203\tIDA\t\tF\tLasA protease precursor\tstaphylolytic protease preproenzyme LasA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1871\tlasA\t\tGO:0015628\tPMID:9642203\tIDA\t\tP\tLasA protease precursor\tstaphylolytic protease preproenzyme LasA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1871\tlasA\t\tGO:0043952\tPMID:9642203\tIDA\t\tP\tLasA protease precursor\tstaphylolytic protease preproenzyme LasA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1871\tlasA\t\tGO:0006508\tPMID:1597429\tIDA\t\tP\tLasA protease precursor\tstaphylolytic protease preproenzyme LasA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1871\tlasA\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tLasA protease precursor\tstaphylolytic protease preproenzyme LasA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1886\tpolB\t\tGO:0034061\tPMID:9079692\tISS\t\tF\tDNA polymerase II\tdinA|DNA-directed DNA polymerase II\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1898\tqscR\t\tGO:1900377\tPMID:11226312\tIMP\t\tP\tquorum-sensing control repressor\tphzR|qscR|quorum-sensing control repressor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1898\tqscR\t\tGO:0044212\tPMID:16390453\tIDA\t\tF\tquorum-sensing control repressor\tphzR|qscR|quorum-sensing control repressor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1898\tqscR\t\tGO:0009372\tPMID:16390453\tIDA\t\tP\tquorum-sensing control repressor\tphzR|qscR|quorum-sensing control repressor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1899\tphzA2\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tprobable phenazine biosynthesis protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1900\tphzB2\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tprobable phenazine biosynthesis protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1901\tphzC2\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tphenazine biosynthesis protein PhzC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1902\tphzD2\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tphenazine biosynthesis protein PhzD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1903\tphzE2\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tphenazine biosynthesis protein PhzE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1904\tphzF2\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tprobable phenazine biosynthesis protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1905\tphzG2\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tprobable pyridoxamine 5'-phosphate oxidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1910\tfemA\t\tGO:0015891\tPMID:18086184\tIMP\t\tP\tferric-mycobactin receptor, FemA\tufrA|femA|ferric-mycobactin receptor, FemA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1910\tfemA\t\tGO:0016987\tPMID:18086184\tIMP\t\tF\tferric-mycobactin receptor, FemA\tufrA|femA|ferric-mycobactin receptor, FemA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1910\tfemA\t\tGO:0034756\tPMID:18086184\tIMP\t\tP\tferric-mycobactin receptor, FemA\tufrA|femA|ferric-mycobactin receptor, FemA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1910\tfemA\t\tGO:0005829\tPMID:18086184\tNAS\t\tC\tferric-mycobactin receptor, FemA\tufrA|femA|ferric-mycobactin receptor, FemA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1911\tfemR\t\tGO:0016989\tPMID:18086184\tISS\t\tF\tsigma factor regulator, FemR\tfemR|sigma factor regulator, FemR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1912\tfemI\t\tGO:0015344\tPMID:18086184\tIMP\t\tF\tECF sigma factor, FemI\tfemI|ECF sigma factor, FemI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1912\tfemI\t\tGO:0038023\tPMID:18086184\tISS\t\tF\tECF sigma factor, FemI\tfemI|ECF sigma factor, FemI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1912\tfemI\t\tGO:0015891\tPMID:18086184\tIMP\t\tP\tECF sigma factor, FemI\tfemI|ECF sigma factor, FemI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1912\tfemI\t\tGO:0007166\tPMID:18086184\tISS\t\tP\tECF sigma factor, FemI\tfemI|ECF sigma factor, FemI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1919\tnrdG\t\tGO:0004748\tPMID:8954104\tISS\tUniProtKB:P0A9N8\tF\tclass III (anaerobic) ribonucleoside-triphosphate reductase activating protein, 'activase', NrdG\tnrdG|class III (anaerobic) ribonucleoside-triphosphate reductase activating protein, 'activase', NrdG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1920\tnrdD\t\tGO:0009405\tPMID:17481950\tIMP\t\tP\tclass III (anaerobic) ribonucleoside-triphosphate reductase subunit, NrdD\tnrdD|class III (anaerobic) ribonucleoside-triphosphate reductase subunit, NrdD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1920\tnrdD\t\tGO:0004748\tPMID:8954104\tISS\tUniProtKB:P28903\tF\tclass III (anaerobic) ribonucleoside-triphosphate reductase subunit, NrdD\tnrdD|class III (anaerobic) ribonucleoside-triphosphate reductase subunit, NrdD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1927\tmetE\t\tGO:0003871\tPMID:1339288\tISS\t\tF\t5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase\tcobalamin-independent methionine synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1928\trimJ\t\tGO:0006473\tPMID:19352641\tISS\t\tP\tribosomal protein alanine acetyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1928\trimJ\t\tGO:0043687\tPMID:19352641\tISS\t\tP\tribosomal protein alanine acetyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1948\trbsC\t\tGO:0015628\tPMID:7901198\tIDA\t\tP\tmembrane protein component of ABC ribose transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1948\trbsC\t\tGO:0043952\tPMID:7901198\tIDA\t\tP\tmembrane protein component of ABC ribose transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1948\trbsC\t\tGO:0052051\tPMID:3148812\tIDA\t\tP\tmembrane protein component of ABC ribose transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1950\trbsK\t\tGO:0004747\tPMID:6327617\tISS\t\tF\tribokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1951\tfapF\t\tGO:0044010\tPMID:20572935\tIGI\t\tP\tFapF\tFapF|fapF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1951\tfapF\t\tGO:1990000\tPMID:23504942\tIMP\t\tP\tFapF\tFapF|fapF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1952\tfapE\t\tGO:0044010\tPMID:20572935\tIGI\t\tP\tFapE\tFapE|fapE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1952\tfapE\t\tGO:1990000\tPMID:23504942\tIMP\t\tP\tFapE\tFapE|fapE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1953\tfapD\t\tGO:0044010\tPMID:20572935\tIGI\t\tP\tFapD\tFapD|fapD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1953\tfapD\t\tGO:1990000\tPMID:23504942\tIMP\t\tP\tFapD\tFapD|fapD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1954\tfapC\t\tGO:0044010\tPMID:20572935\tIGI\t\tP\tFapC\tFapC|fapC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1954\tfapC\t\tGO:1990000\tPMID:23504942\tIMP\t\tP\tFapC\tFapC|fapC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1954\tfapC\t\tGO:0009405\tPMID:17481950\tIMP\t\tP\tFapC\tFapC|fapC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1955\tfapB\t\tGO:0044010\tPMID:20572935\tIGI\t\tP\tFapB\tFapB|fapB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1955\tfapB\t\tGO:1990000\tPMID:23504942\tIMP\t\tP\tFapB\tFapB|fapB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1956\tfapA\t\tGO:0044010\tPMID:20572935\tIGI\t\tP\tFapA\tFapA|fapA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1956\tfapA\t\tGO:1990000\tPMID:23504942\tIMP\t\tP\tFapA\tFapA|fapA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1962\tazoR2\t\tGO:0016655\tPMID:24915188\tIDA\t\tF\tFMN-dependent NADH-azoreductase 2, AzoR2\tazoR2|FMN-dependent NADH-azoreductase 2, AzoR2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1971\tbraZ\t\tGO:0015803\tPMID:1900503\tIDA\t\tP\tbranched chain amino acid transporter BraZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1973\tpqqF\t\tGO:0018189\tPMID:7665488\tISS\t\tP\tpyrroloquinoline quinone biosynthesis protein F\tcoenzyme PQQ synthesis protein F\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1973\tpqqF\t\tGO:0008237\tPMID:8606199\tISS\tRefSeq:YP_002963390.1\tF\tpyrroloquinoline quinone biosynthesis protein F\tcoenzyme PQQ synthesis protein F\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1973\tpqqF\t\tGO:0042597\tPMID:8606199\tISS\tRefSeq:YP_002963390.1\tC\tpyrroloquinoline quinone biosynthesis protein F\tcoenzyme PQQ synthesis protein F\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1976\tercS'\t\tGO:1900065\tPMID:20093290\tIMP\t\tP\tErcS'\tercS'|ErcS'\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1976\tercS'\t\tGO:0000155\tPMID:20093290\tISS\t\tF\tErcS'\tercS'|ErcS'\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1979\teraS\t\tGO:0000155\tPMID:12686116\tISS\t\tF\tsensor kinase, EraS\texaD|ExaD|eraS|sensor kinase, EraS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1979\teraS\t\tGO:0045893\tPMID:12686116\tIMP\t\tP\tsensor kinase, EraS\texaD|ExaD|eraS|sensor kinase, EraS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1979\teraS\t\tGO:0000155\tPMID:11158353\tISS\t\tF\tsensor kinase, EraS\texaD|ExaD|eraS|sensor kinase, EraS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1980\teraR\t\tGO:0000156\tPMID:11158353\tISS\t\tF\tresponse regulator EraR\texaE|ExaE|eraR|response regulator EraR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1980\teraR\t\tGO:0000156\tPMID:12686116\tISS\t\tF\tresponse regulator EraR\texaE|ExaE|eraR|response regulator EraR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1980\teraR\t\tGO:0045893\tPMID:12686116\tIMP\t\tP\tresponse regulator EraR\texaE|ExaE|eraR|response regulator EraR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1982\texaA\t\tGO:0018468\tPMID:9826187\tIDA\t\tF\tquinoprotein ethanol dehydrogenase\tquinoprotein alcohol dehydrogenase|quinoprotein ethanol dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1982\texaA\t\tGO:0006069\tPMID:10075429\tIDA\t\tP\tquinoprotein ethanol dehydrogenase\tquinoprotein alcohol dehydrogenase|quinoprotein ethanol dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1983\texaB\t\tGO:0006069\tPMID:10075429\tIMP\t\tP\tcytochrome c550\tcytochrome c(EDH)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1984\texaC\t\tGO:0004029\tPMID:10075429\tISS\t\tF\tNAD+ dependent aldehyde dehydrogenase ExaC\texaC1|exaC|NAD+ dependent aldehyde dehydrogenase ExaC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1984\texaC\t\tGO:0006069\tPMID:10075429\tISS\t\tP\tNAD+ dependent aldehyde dehydrogenase ExaC\texaC1|exaC|NAD+ dependent aldehyde dehydrogenase ExaC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1992\tercS\t\tGO:0000155\tPMID:20093290\tISS\t\tF\tErcS\tercS|ErcS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1996\tppiC1\t\tGO:0000413\tPMID:8163020\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase C1\tParvulin, PPIase C|Rotamase C\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1998\tdhcR\t\tGO:0003700\tPMID:19406895\tIMP\t\tF\ttranscriptional regulator, DhcR\tdhcR|DhcR, transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1998\tdhcR\t\tGO:0009896\tPMID:19406895\tIMP\t\tP\ttranscriptional regulator, DhcR\tdhcR|DhcR, transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1999\tdhcA\t\tGO:0042413\tPMID:19406895\tIMP\t\tP\tdehydrocarnitine CoA transferase, subunit A\tpcaI|atoD|scoA|dhcA|dehydrocarnitine CoA transferase, subunit A|DhcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2000\tdhcB\t\tGO:0042413\tPMID:19406895\tIMP\t\tP\tdehydrocarnitine CoA transferase, subunit B\tatoA|scoB|dhcB|dehydrocarnitine CoA transferase, subunit B|DhcB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2005\thbcR\t\tGO:0044212\tPMID:26311173\tIDA\t\tF\tHbcR\thbcR|HbcR|probable transcriptional regulator|(R)-3-hydroxybutyrate catabolism regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2007\tmaiA\t\tGO:0016034\tPMID:9417084\tISS\t\tF\tmaleylacetoacetate isomerase\tglutathione transferase zeta 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2007\tmaiA\t\tGO:0006559\tPMID:9417084\tISS\t\tP\tmaleylacetoacetate isomerase\tglutathione transferase zeta 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2008\tfahA\t\tGO:0004334\tPMID:8364576\tISS\t\tF\tfumarylacetoacetase\tfumarylacetoacetate hydrolase|beta-diketonase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2008\tfahA\t\tGO:0006572\tPMID:8364576\tISS\t\tP\tfumarylacetoacetase\tfumarylacetoacetate hydrolase|beta-diketonase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2009\thmgA\t\tGO:0004411\tPMID:7673153\tISS\t\tF\thomogentisate 1,2-dioxygenase\thomogentisicase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2009\thmgA\t\tGO:0006559\tPMID:7673153\tISS\t\tP\thomogentisate 1,2-dioxygenase\thomogentisicase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2011\tliuE\t\tGO:0008300\tPMID:16517656\tIMP\t\tP\t3-hydroxy-3-methylglutaryl-CoA lyase\tmvaB|gnyL|HMG-CoA lyase|HMG lyase, MvaB|Hydroxymethylglutaryl-coenzymeA lyase, GnyH|liuE|3-hydroxy-3-methylglutaryl-CoA lyase|3-hydroxy-gamma-carboxygeranoyl-CoA lyase, GnyL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2011\tliuE\t\tGO:0004419\tPMID:16517656\tIMP\t\tF\t3-hydroxy-3-methylglutaryl-CoA lyase\tmvaB|gnyL|HMG-CoA lyase|HMG lyase, MvaB|Hydroxymethylglutaryl-coenzymeA lyase, GnyH|liuE|3-hydroxy-3-methylglutaryl-CoA lyase|3-hydroxy-gamma-carboxygeranoyl-CoA lyase, GnyL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2011\tliuE\t\tGO:0046247\tPMID:19459965\tIMP\t\tP\t3-hydroxy-3-methylglutaryl-CoA lyase\tmvaB|gnyL|HMG-CoA lyase|HMG lyase, MvaB|Hydroxymethylglutaryl-coenzymeA lyase, GnyH|liuE|3-hydroxy-3-methylglutaryl-CoA lyase|3-hydroxy-gamma-carboxygeranoyl-CoA lyase, GnyL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2011\tliuE\t\tGO:0006552\tPMID:19459965\tIMP\t\tP\t3-hydroxy-3-methylglutaryl-CoA lyase\tmvaB|gnyL|HMG-CoA lyase|HMG lyase, MvaB|Hydroxymethylglutaryl-coenzymeA lyase, GnyH|liuE|3-hydroxy-3-methylglutaryl-CoA lyase|3-hydroxy-gamma-carboxygeranoyl-CoA lyase, GnyL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2012\tliuD\t\tGO:0008300\tPMID:16517656\tIMP\t\tP\tmethylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)\taccA|mccA|gnyA|alpha subunit of geranoyl-CoA carboxylase, GnyA|MccA|liuD|methylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2012\tliuD\t\tGO:0004485\tPMID:16517656\tIMP\t\tF\tmethylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)\taccA|mccA|gnyA|alpha subunit of geranoyl-CoA carboxylase, GnyA|MccA|liuD|methylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2012\tliuD\t\tGO:0004485\tPMID:18469096\tIDA\t\tF\tmethylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)\taccA|mccA|gnyA|alpha subunit of geranoyl-CoA carboxylase, GnyA|MccA|liuD|methylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2012\tliuD\t\tGO:0006552\tPMID:16820476\tIMP\t\tP\tmethylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)\taccA|mccA|gnyA|alpha subunit of geranoyl-CoA carboxylase, GnyA|MccA|liuD|methylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2012\tliuD\t\tGO:0046247\tPMID:16820476\tIMP\t\tP\tmethylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)\taccA|mccA|gnyA|alpha subunit of geranoyl-CoA carboxylase, GnyA|MccA|liuD|methylcrotonyl-CoA carboxylase, alpha-subunit (biotin-containing)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2013\tliuC\t\tGO:0008300\tPMID:16517656\tIMP\t\tP\tputative 3-methylglutaconyl-CoA hydratase\tmenB|gnyH|gamma-carboxygeranoyl-CoA hydratase, GnyH|liuC|putative 3-methylglutaconyl-CoA hydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2013\tliuC\t\tGO:0004490\tPMID:16517656\tIMP\t\tF\tputative 3-methylglutaconyl-CoA hydratase\tmenB|gnyH|gamma-carboxygeranoyl-CoA hydratase, GnyH|liuC|putative 3-methylglutaconyl-CoA hydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2013\tliuC\t\tGO:0006552\tPMID:16820476\tIMP\t\tP\tputative 3-methylglutaconyl-CoA hydratase\tmenB|gnyH|gamma-carboxygeranoyl-CoA hydratase, GnyH|liuC|putative 3-methylglutaconyl-CoA hydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2013\tliuC\t\tGO:0046247\tPMID:16820476\tIMP\t\tP\tputative 3-methylglutaconyl-CoA hydratase\tmenB|gnyH|gamma-carboxygeranoyl-CoA hydratase, GnyH|liuC|putative 3-methylglutaconyl-CoA hydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2014\tliuB\t\tGO:0008300\tPMID:16517656\tIMP\t\tP\tmethylcrotonyl-CoA carboxylase, beta-subunit\tgnyB|MccB|beta subunit of geranoyl-CoA carboxylase, GnyB|liuB|methylcrotonyl-CoA carboxylase, beta-subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2014\tliuB\t\tGO:0004485\tPMID:16517656\tIMP\t\tF\tmethylcrotonyl-CoA carboxylase, beta-subunit\tgnyB|MccB|beta subunit of geranoyl-CoA carboxylase, GnyB|liuB|methylcrotonyl-CoA carboxylase, beta-subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2014\tliuB\t\tGO:0004485\tPMID:18469096\tIDA\t\tF\tmethylcrotonyl-CoA carboxylase, beta-subunit\tgnyB|MccB|beta subunit of geranoyl-CoA carboxylase, GnyB|liuB|methylcrotonyl-CoA carboxylase, beta-subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2015\tliuA\t\tGO:0008300\tPMID:16517656\tIMP\t\tP\tputative isovaleryl-CoA dehydrogenase\tgnyD|ivd|Ivd|Citronelloyl-CoA dehydrogenase, GnyD|liuA|putative isovaleryl-CoA dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2015\tliuA\t\tGO:0008470\tPMID:16517656\tIMP\t\tF\tputative isovaleryl-CoA dehydrogenase\tgnyD|ivd|Ivd|Citronelloyl-CoA dehydrogenase, GnyD|liuA|putative isovaleryl-CoA dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2015\tliuA\t\tGO:0008470\tPMID:18625020\tIDA\t\tF\tputative isovaleryl-CoA dehydrogenase\tgnyD|ivd|Ivd|Citronelloyl-CoA dehydrogenase, GnyD|liuA|putative isovaleryl-CoA dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2016\tliuR\t\tGO:0008300\tPMID:15345388\tIMP\t\tP\tregulator of liu genes\tgnyR|GnyR|liuR|regulator of liu genes|Regulatory gene of gnyRDBHAL cluster, GnyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2016\tliuR\t\tGO:0006351\tPMID:18820024\tISS\t\tP\tregulator of liu genes\tgnyR|GnyR|liuR|regulator of liu genes|Regulatory gene of gnyRDBHAL cluster, GnyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2016\tliuR\t\tGO:0006521\tPMID:18820024\tISS\t\tP\tregulator of liu genes\tgnyR|GnyR|liuR|regulator of liu genes|Regulatory gene of gnyRDBHAL cluster, GnyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0046677\tPMID:10952562\tIMP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0015238\tPMID:10543738\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0015238\tPMID:9925549\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0046677\tPMID:10952562\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0046677\tPMID:16030228\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0042493\tPMID:16030228\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2019\tmexX\t\tGO:0046677\tPMID:10952562\tIMP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tamrA|mexX|mexG|RND multidrug efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2019\tmexX\t\tGO:0015238\tPMID:10543738\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tamrA|mexX|mexG|RND multidrug efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2019\tmexX\t\tGO:0015238\tPMID:9925549\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tamrA|mexX|mexG|RND multidrug efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2019\tmexX\t\tGO:0046677\tPMID:10952562\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tamrA|mexX|mexG|RND multidrug efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2019\tmexX\t\tGO:0046677\tPMID:16030228\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tamrA|mexX|mexG|RND multidrug efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2019\tmexX\t\tGO:0042493\tPMID:16030228\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tamrA|mexX|mexG|RND multidrug efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2020\tmexZ\t\tGO:0044212\tPMID:15336398\tIDA\t\tF\tMexZ\tamrR|mexZ|MexZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2020\tmexZ\t\tGO:0045892\tPMID:15336398\tIMP\t\tP\tMexZ\tamrR|mexZ|MexZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2020\tmexZ\t\tGO:0006355\tPMID:15336398\tIDA\t\tP\tMexZ\tamrR|mexZ|MexZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2020\tmexZ\t\tGO:0032410\tPMID:15105120\tIMP\t\tP\tMexZ\tamrR|mexZ|MexZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2020\tmexZ\t\tGO:0034763\tPMID:15105120\tIMP\t\tP\tMexZ\tamrR|mexZ|MexZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2023\tgalU\t\tGO:0003983\tPMID:7499387\tISS\t\tF\tUTP--glucose-1-phosphate uridylyltransferase\tgtaB|hasC|glucose-1-phosphate uridylyltransferase|UDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2023\tgalU\t\tGO:0009244\tPMID:12044687\tIMP\t\tP\tUTP--glucose-1-phosphate uridylyltransferase\tgtaB|hasC|glucose-1-phosphate uridylyltransferase|UDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2023\tgalU\t\tGO:0009405\tPMID:15213167\tIMP\t\tP\tUTP--glucose-1-phosphate uridylyltransferase\tgtaB|hasC|glucose-1-phosphate uridylyltransferase|UDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2041\tPA2041\t\tGO:0009447\tPMID:23719730\tISS\t\tP\tAmino acid permease\tAmino acid permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2050\tPA2050\t\tGO:0016987\tPMID:18086184\tIMP\t\tF\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2050\tPA2050\t\tGO:0010959\tPMID:18086184\tIMP\t\tP\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2050\tPA2050\t\tGO:0005829\tPMID:18086184\tNAS\t\tC\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2051\tPA2051\t\tGO:0016989\tPMID:18086184\tISS\t\tF\tprobable transmembrane sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2052\tcynS\t\tGO:0008824\tPMID:2822670\tISS\t\tF\tcyanate lyase\tcyanate hydrolase|cyanase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2053\tcynT\t\tGO:0004089\tPMID:23728627\tIDA\t\tF\tcarbonate dehydratase\tcarbonic anhydrase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2053\tcynT\t\tGO:0008270\tPMID:23728627\tIDA\t\tF\tcarbonate dehydratase\tcarbonic anhydrase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2053\tcynT\t\tGO:0004089\tPMID:1740425\tISS\t\tF\tcarbonate dehydratase\tcarbonic anhydrase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2057\tsppR\t\tGO:0038023\tPMID:18086184\tISS\t\tF\tTonB-dependent receptor, SppR\tsppR|TonB-dependent receptor, SppR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2057\tsppR\t\tGO:0007166\tPMID:18086184\tISS\t\tP\tTonB-dependent receptor, SppR\tsppR|TonB-dependent receptor, SppR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2057\tsppR\t\tGO:0019867\tPMID:18086184\tIDA\t\tC\tTonB-dependent receptor, SppR\tsppR|TonB-dependent receptor, SppR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2064\tpcoB\t\tGO:0005375\tPMID:1924351\tISS\t\tF\tcopper resistance protein B precursor\tcopB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2065\tpcoA\t\tGO:0005507\tPMID:8594334\tISS\t\tF\tcopper resistance protein A precursor\tcopA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2070\tPA2070\t\tGO:0038023\tPMID:18086184\tISS\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2070\tPA2070\t\tGO:0007166\tPMID:18086184\tISS\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2070\tPA2070\t\tGO:0019867\tPMID:18086184\tIDA\t\tC\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2071\tfusA2\t\tGO:0003746\tPMID:6322136\tISS\t\tF\telongation factor G\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2077\tPA2077\t\tGO:0031408\tPMID:24980978\tIMP\t\tP\toleate 10S-lipoxygenase\toleate 10S-lipoxygenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2077\tPA2077\t\tGO:0051213\tPMID:24980978\tIMP\t\tF\toleate 10S-lipoxygenase\toleate 10S-lipoxygenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2078\tPA2078\t\tGO:0031408\tPMID:24980978\tIMP\t\tP\t(7S,10S)-hydroperoxide diol synthase\t(7S,10S)-hydroperoxide diol synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2080\tkynU\t\tGO:0019441\tPMID:17337571\tIMP\t\tP\tkynureninase KynU\tkynureninase KynU|kynU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2081\tkynB\t\tGO:0019441\tPMID:17337571\tIMP\t\tP\tkynurenine formamidase, KynB\tkynB|kynurenine formamidase, KynB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2081\tkynB\t\tGO:0004061\tPMID:14592712\tIDA\t\tF\tkynurenine formamidase, KynB\tkynB|kynurenine formamidase, KynB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2082\tkynR\t\tGO:0030429\tPMID:9628740\tISS\t\tF\tKynR\tKynR|kynR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2089\tPA2089\t\tGO:0038023\tPMID:18086184\tISS\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2089\tPA2089\t\tGO:0007166\tPMID:18086184\tISS\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2089\tPA2089\t\tGO:0019867\tPMID:18086184\tIDA\t\tC\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2093\tPA2093\t\tGO:0016987\tPMID:18086184\tIMP\t\tF\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2093\tPA2093\t\tGO:0034756\tPMID:18086184\tIMP\t\tP\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2093\tPA2093\t\tGO:0005829\tPMID:18086184\tNAS\t\tC\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2094\tPA2094\t\tGO:0016989\tPMID:18086184\tISS\t\tF\tprobable transmembrane sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2118\tada\t\tGO:0008168\tPMID:2987251\tISS\t\tF\tO6-methylguanine-DNA methyltransferase\ttranscriptional regulator Ada\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2119\tPA2119\t\tGO:0003824\tPMID:2144274\tISS\t\tF\talcohol dehydrogenase (Zn-dependent)\tadh\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2126\tcgrC\t\tGO:0044212\tPMID:21926232\tIDA\t\tF\tcupA gene regulator C, CgrC\tcupA gene regulator C, CgrC|cgrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2126\tcgrC\t\tGO:0005515\tPMID:21926232\tIPI\tPseudoCAP:PA2127\tF\tcupA gene regulator C, CgrC\tcupA gene regulator C, CgrC|cgrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2126\tcgrC\t\tGO:0071453\tPMID:17890313\tIEP\t\tP\tcupA gene regulator C, CgrC\tcupA gene regulator C, CgrC|cgrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2126\tcgrC\t\tGO:0071453\tPMID:20553552\tIEP\t\tP\tcupA gene regulator C, CgrC\tcupA gene regulator C, CgrC|cgrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2127\tcgrA\t\tGO:0044212\tPMID:21926232\tIDA\t\tF\tcupA gene regulator A, CgrA\tcupA gene regulator A, CgrA|cgrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2127\tcgrA\t\tGO:0005515\tPMID:21926232\tIPI\tPseudoCAP:PA2126\tF\tcupA gene regulator A, CgrA\tcupA gene regulator A, CgrA|cgrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2127\tcgrA\t\tGO:0071453\tPMID:17890313\tIEP\t\tP\tcupA gene regulator A, CgrA\tcupA gene regulator A, CgrA|cgrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2127\tcgrA\t\tGO:0071453\tPMID:20553552\tIEP\t\tP\tcupA gene regulator A, CgrA\tcupA gene regulator A, CgrA|cgrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2128\tcupA1\t\tGO:0072707\tPMID:19638175\tIEP\t\tP\tfimbrial subunit CupA1\tprobable fimbrial protein (precursor)|component of adhesin|cupA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2128\tcupA1\t\tGO:0098743\tPMID:19638175\tIMP\t\tP\tfimbrial subunit CupA1\tprobable fimbrial protein (precursor)|component of adhesin|cupA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2128\tcupA1\t\tGO:0071453\tPMID:17581126\tIEP\t\tP\tfimbrial subunit CupA1\tprobable fimbrial protein (precursor)|component of adhesin|cupA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2128\tcupA1\t\tGO:0071407\tPMID:17803773\tIMP\t\tP\tfimbrial subunit CupA1\tprobable fimbrial protein (precursor)|component of adhesin|cupA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2128\tcupA1\t\tGO:0071407\tPMID:17803773\tIEP\t\tP\tfimbrial subunit CupA1\tprobable fimbrial protein (precursor)|component of adhesin|cupA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2128\tcupA1\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tfimbrial subunit CupA1\tprobable fimbrial protein (precursor)|component of adhesin|cupA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2128\tcupA1\t\tGO:0071453\tPMID:17890313\tIEP\t\tP\tfimbrial subunit CupA1\tprobable fimbrial protein (precursor)|component of adhesin|cupA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2129\tcupA2\t\tGO:0007155\tPMID:11381121\tIMP\t\tP\tchaperone CupA2\tprobable pili assembly chaperone|component of adhesin|cupA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2129\tcupA2\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tchaperone CupA2\tprobable pili assembly chaperone|component of adhesin|cupA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2129\tcupA2\t\tGO:0097311\tPMID:14731271\tIMP\t\tC\tchaperone CupA2\tprobable pili assembly chaperone|component of adhesin|cupA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2129\tcupA2\t\tGO:0071453\tPMID:17581126\tIEP\t\tP\tchaperone CupA2\tprobable pili assembly chaperone|component of adhesin|cupA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2130\tcupA3\t\tGO:0015473\tPMID:11381121\tISS\t\tF\tusher CupA3\tprobable fimbrial biogenesis usher protein|cupA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2130\tcupA3\t\tGO:0007155\tPMID:11381121\tIMP\t\tP\tusher CupA3\tprobable fimbrial biogenesis usher protein|cupA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2130\tcupA3\t\tGO:0007155\tPMID:15090530\tIMP\t\tP\tusher CupA3\tprobable fimbrial biogenesis usher protein|cupA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2130\tcupA3\t\tGO:0009405\tPMID:19047519\tIMP\t\tP\tusher CupA3\tprobable fimbrial biogenesis usher protein|cupA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2130\tcupA3\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tusher CupA3\tprobable fimbrial biogenesis usher protein|cupA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2130\tcupA3\t\tGO:0098743\tPMID:19638175\tIMP\t\tP\tusher CupA3\tprobable fimbrial biogenesis usher protein|cupA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2130\tcupA3\t\tGO:0071453\tPMID:17581126\tIEP\t\tP\tusher CupA3\tprobable fimbrial biogenesis usher protein|cupA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2131\tcupA4\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tfimbrial subunit CupA4\tcupA4|fimbrial subunit CupA4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2131\tcupA4\t\tGO:0071453\tPMID:17581126\tIEP\t\tP\tfimbrial subunit CupA4\tcupA4|fimbrial subunit CupA4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2132\tcupA5\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tchaperone CupA5\tprobable pili assembly chaperone|cupA5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2132\tcupA5\t\tGO:0071453\tPMID:17581126\tIEP\t\tP\tchaperone CupA5\tprobable pili assembly chaperone|cupA5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2133\tPA2133\t\tGO:0071111\tPMID:16477007\tIDA\t\tF\tCyclic-guanylate-specific phosphodiesterase\tCyclic-guanylate-specific phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2133\tPA2133\t\tGO:1900191\tPMID:16186483\tIMP\t\tP\tCyclic-guanylate-specific phosphodiesterase\tCyclic-guanylate-specific phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2133\tPA2133\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tCyclic-guanylate-specific phosphodiesterase\tCyclic-guanylate-specific phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2138\tligD\t\tGO:0003887\tPMID:15520014\tIDA\t\tF\tMultifunctional non-homologous end joining protein LigD\tligD|Multifunctional non-homologous end joining protein LigD|probable ATP-dependent DNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2138\tligD\t\tGO:0003910\tPMID:15520014\tIDA\t\tF\tMultifunctional non-homologous end joining protein LigD\tligD|Multifunctional non-homologous end joining protein LigD|probable ATP-dependent DNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2138\tligD\t\tGO:0004532\tPMID:15897197\tIDA\t\tF\tMultifunctional non-homologous end joining protein LigD\tligD|Multifunctional non-homologous end joining protein LigD|probable ATP-dependent DNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2138\tligD\t\tGO:0016779\tPMID:15520014\tIDA\t\tF\tMultifunctional non-homologous end joining protein LigD\tligD|Multifunctional non-homologous end joining protein LigD|probable ATP-dependent DNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2138\tligD\t\tGO:0071897\tPMID:15520014\tIDA\t\tP\tMultifunctional non-homologous end joining protein LigD\tligD|Multifunctional non-homologous end joining protein LigD|probable ATP-dependent DNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2138\tligD\t\tGO:0090503\tPMID:15897197\tIDA\t\tP\tMultifunctional non-homologous end joining protein LigD\tligD|Multifunctional non-homologous end joining protein LigD|probable ATP-dependent DNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2144\tglgP\t\tGO:0044042\tPMID:3047129\tISS\t\tP\tglycogen phosphorylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2144\tglgP\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT36\tF\tglycogen phosphorylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2147\tkatE\t\tGO:0004096\tPMID:1987146\tISS\t\tF\tcatalase HPII\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2153\tglgB\t\tGO:0003844\tPMID:3013861\tISS\t\tF\t1,4-alpha-glucan branching enzyme\tglycogen branching enzyme\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2165\tPA2165\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT5\tF\tprobable glycogen synthase\tglgA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2196\tPA2196\t\tGO:0000976\tPMID:24070609\tIDA\t\tF\tTetR family transcriptional regulator\tTetR family transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2200\tPA2200\t\tGO:0071111\tPMID:16477007\tIDA\t\tF\tCyclic-guanylate-specific phosphodiesterase\tCyclic-guanylate-specific phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2206\tPA2206\t\tGO:0044212\tPMID:23382903\tIDA\t\tF\tLysR-type transcriptional regulator\tLysR-type transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2206\tPA2206\t\tGO:1901031\tPMID:23382903\tIMP\t\tP\tLysR-type transcriptional regulator\tLysR-type transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2227\tvqsM\t\tGO:0043902\tPMID:16194239\tIMP\t\tP\tAraC-type transcriptional regulator VqsM\tvqsM|AraC-type transcriptional regulator VqsM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2231\tpslA\t\tGO:0044010\tPMID:19659934\tIDA\t\tP\tPslA\tPslA|pslA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2231\tpslA\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\tPslA\tPslA|pslA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2232\tpslB\t\tGO:0044010\tPMID:19659934\tIDA\t\tP\tPslB\tPslB|pslB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2232\tpslB\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\tPslB\tPslB|pslB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2232\tpslB\t\tGO:0050089\tPMID:19659934\tIMP\t\tF\tPslB\tPslB|pslB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2233\tpslC\t\tGO:0044010\tPMID:19659934\tIDA\t\tP\tPslC\tPslC|pslC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2233\tpslC\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\tPslC\tPslC|pslC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2233\tpslC\t\tGO:0016757\tPMID:21991261\tISS\tUniProtKB:O08912\tF\tPslC\tPslC|pslC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2233\tpslC\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tPslC\tPslC|pslC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2234\tpslD\t\tGO:0044010\tPMID:16598021\tIMP\t\tP\tPslD\tPslD|pslD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2234\tpslD\t\tGO:0030114\tPMID:16598021\tIMP\t\tC\tPslD\tPslD|pslD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2234\tpslD\t\tGO:0044010\tPMID:23657259\tIDA\t\tP\tPslD\tPslD|pslD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2234\tpslD\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\tPslD\tPslD|pslD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2235\tpslE\t\tGO:0044010\tPMID:19659934\tIDA\t\tP\tPslE\tPslE|pslE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2235\tpslE\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\tPslE\tPslE|pslE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2236\tpslF\t\tGO:0044010\tPMID:19659934\tIDA\t\tP\tPslF\tPslF|pslF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2236\tpslF\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\tPslF\tPslF|pslF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2236\tpslF\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tPslF\tPslF|pslF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2237\tpslG\t\tGO:0044010\tPMID:19659934\tIDA\t\tP\tPslG\tPslG|pslG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2237\tpslG\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\tPslG\tPslG|pslG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2238\tpslH\t\tGO:0044010\tPMID:19659934\tIDA\t\tP\tPslH\tPslH|pslH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2238\tpslH\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\tPslH\tPslH|pslH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2238\tpslH\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tPslH\tPslH|pslH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2239\tpslI\t\tGO:0044010\tPMID:19659934\tIDA\t\tP\tPslI\tPslI|pslI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2239\tpslI\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\tPslI\tPslI|pslI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2239\tpslI\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tPslI\tPslI|pslI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2240\tpslJ\t\tGO:0044010\tPMID:19659934\tIDA\t\tP\tPslJ\tPslJ|pslJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2240\tpslJ\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\tPslJ\tPslJ|pslJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2241\tpslK\t\tGO:0044010\tPMID:19659934\tIDA\t\tP\tPslL\tPslL|pslK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2241\tpslK\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\tPslL\tPslL|pslK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2242\tpslL\t\tGO:0044010\tPMID:19659934\tIDA\t\tP\thypothetical protein\tpslL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2242\tpslL\t\tGO:0045226\tPMID:19659934\tIMP\t\tP\thypothetical protein\tpslL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2247\tbkdA1\t\tGO:0043436\tPMID:3416875\tISS\t\tP\t2-oxoisovalerate dehydrogenase (alpha subunit)\tbranched-chain alpha-keto acid decarboxylase|3-methyl-2-oxobutanoate dehydrogenase (lipoamide)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2248\tbkdA2\t\tGO:0043436\tPMID:3416875\tISS\t\tP\t2-oxoisovalerate dehydrogenase (beta subunit)\tbranched-chain alpha-keto acid decarboxylase|3-methyl-2-oxobutanoate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2249\tbkdB\t\tGO:0043436\tPMID:3046941\tISS\t\tP\tbranched-chain alpha-keto acid dehydrogenase (lipoamide component)\tdihydrolipoamide branched chain transacylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2250\tlpdV\t\tGO:0043436\tPMID:2917566\tISS\t\tP\tlipoamide dehydrogenase-Val\tlipoamide dehydrogenase (E3 subunit)|Lpd-Val\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2250\tlpdV\t\tGO:0006520\tPMID:2917566\tISS\t\tP\tlipoamide dehydrogenase-Val\tlipoamide dehydrogenase (E3 subunit)|Lpd-Val\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2258\tptxR\t\tGO:1900377\tPMID:16803594\tIMP\t\tP\ttranscriptional regulator PtxR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2258\tptxR\t\tGO:0045862\tPMID:16803594\tIMP\t\tP\ttranscriptional regulator PtxR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2258\tptxR\t\tGO:0003950\tPMID:8843437\tIMP\t\tF\ttranscriptional regulator PtxR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2258\tptxR\t\tGO:0044212\tPMID:22844393\tIDA\t\tF\ttranscriptional regulator PtxR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2258\tptxR\t\tGO:0045893\tPMID:22844393\tIDA\t\tP\ttranscriptional regulator PtxR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2259\tptxS\t\tGO:0045892\tPMID:22844393\tIDA\t\tP\ttranscriptional regulator PtxS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2277\tarsR\t\tGO:0048583\tPMID:9802012\tISA\tUniProtKB:P37309\tP\tArsR protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2278\tarsB\t\tGO:0046685\tPMID:9802012\tISS\t\tP\tArsB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2279\tarsC\t\tGO:0046685\tPMID:9802012\tISS\t\tP\tArsC protein\tarsenate reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2280\tPA2280\t\tGO:0016655\tPMID:22304305\tIDA\t\tF\toxidoreductase\tarsH|oxidoreductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2283\tPA2283\t\tGO:0008237\tPMID:9015299\tISS\tUniProtKB:P47154\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2283\tPA2283\t\tGO:0044183\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2283\tPA2283\t\tGO:0031072\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2283\tPA2283\t\tGO:0005886\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tC\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2286\tPA2286\t\tGO:0008237\tPMID:9015299\tISS\tUniProtKB:P47154\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2286\tPA2286\t\tGO:0044183\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2286\tPA2286\t\tGO:0031072\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2286\tPA2286\t\tGO:0005886\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tC\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2290\tgcd\t\tGO:0006091\tPMID:8419307\tISS\t\tP\tglucose dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2290\tgcd\t\tGO:0004344\tPMID:8419307\tISS\t\tF\tglucose dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2290\tgcd\t\tGO:0044248\tPMID:8419307\tISS\t\tP\tglucose dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2320\tgntR\t\tGO:0003700\tPMID:28752954\tIDA\t\tF\ttranscriptional regulator GntR\tgnuR|gluconate repressor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2320\tgntR\t\tGO:0010906\tPMID:28752954\tIMP\t\tP\ttranscriptional regulator GntR\tgnuR|gluconate repressor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2321\tgntK\t\tGO:0004340\tPMID:8655507\tISS\t\tF\tGntK\tgntV|gntK|gnuK|gluconate kinase|GntK|gluconokinase|gluconokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2322\tgntP\t\tGO:0015725\tPMID:9045817\tISS\t\tP\tGntP\tgntU|gntT|gnuT|gntP|GntP|gluconate permease|gluconate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2373\tvgrG3\t\tGO:0033103\tPMID:21325275\tIGC\t\tP\tVgrG3\tVgrG3|vgrG3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2373\tvgrG3\t\tGO:0033104\tPMID:21325275\tIGC\t\tC\tVgrG3\tVgrG3|vgrG3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2382\tlldA\t\tGO:0004459\tPMID:30066495\tIGI\tPseudoCAP:PA4771\tF\tL-lactate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0002049\tPMID:12686626\tISS\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0016811\tPMID:16495538\tIDA\t\tF\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0071978\tPMID:18245294\tIMP\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0009405\tPMID:19778968\tIMP\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0044010\tPMID:19778968\tIMP\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0005737\tPMID:22498339\tIDA\t\tC\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0002049\tPMID:22498339\tIDA\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0047379\tPMID:21892836\tIMP\t\tF\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0002049\tPMID:21892836\tIMP\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0046677\tPMID:21833667\tIMP\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0002049\tPMID:19787431\tIMP\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0071978\tPMID:19778968\tIGI\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0071978\tPMID:18245294\tIEP\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2386\tpvdA\t\tGO:0002049\tPMID:20650894\tIDA\t\tP\tL-ornithine N5-oxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2386\tpvdA\t\tGO:0002049\tPMID:15317763\tIMP\t\tP\tL-ornithine N5-oxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2386\tpvdA\t\tGO:0005737\tPMID:22498339\tIDA\t\tC\tL-ornithine N5-oxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2386\tpvdA\t\tGO:0005737\tPMID:18757814\tIDA\t\tC\tL-ornithine N5-oxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2387\tfpvI\t\tGO:0016987\tPMID:16077110\tISS\t\tF\tFpvI\tfpvI|FpvI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2387\tfpvI\t\tGO:0048518\tPMID:12562796\tIMP\t\tP\tFpvI\tfpvI|FpvI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2387\tfpvI\t\tGO:0016987\tPMID:12562796\tIMP\t\tF\tFpvI\tfpvI|FpvI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2387\tfpvI\t\tGO:0016987\tPMID:12492864\tIMP\t\tF\tFpvI\tfpvI|FpvI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2387\tfpvI\t\tGO:0016987\tPMID:12492864\tISA\tPseudoCAP:PA3899|PseudoCAP:PA2426|PseudoCAP:PFL_2529\tF\tFpvI\tfpvI|FpvI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2387\tfpvI\t\tGO:0016987\tPMID:12492864\tIDA\t\tF\tFpvI\tfpvI|FpvI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2388\tfpvR\t\tGO:0016989\tPMID:12492864\tIMP\t\tF\tFpvR\tfpvR|FpvR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2388\tfpvR\t\tGO:1900705\tPMID:12492864\tIMP\t\tP\tFpvR\tfpvR|FpvR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2388\tfpvR\t\tGO:0016989\tPMID:12492864\tIMP\t\tF\tFpvR\tfpvR|FpvR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2388\tfpvR\t\tGO:0016989\tPMID:22040024\tIPI\tPseudoCAP:PA2426\tF\tFpvR\tfpvR|FpvR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2388\tfpvR\t\tGO:0016989\tPMID:22040024\tIPI\tPseudoCAP:PA2387\tF\tFpvR\tfpvR|FpvR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:1990281\tPMID:22187978\tIDA\t\tC\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:1990281\tPMID:22187978\tIMP\t\tC\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:1990281\tPMID:23766114\tIMP\t\tC\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:1990281\tPMID:19906986\tIMP\t\tC\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:1990281\tPMID:19906986\tIDA\t\tC\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:1990281\tPMID:21035449\tIDA\t\tC\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:0015562\tPMID:22187978\tIMP\t\tF\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:0015562\tPMID:22187978\tIDA\t\tF\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:0015562\tPMID:23766114\tIMP\t\tF\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:0015562\tPMID:19906986\tIMP\t\tF\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:0015562\tPMID:19906986\tIDA\t\tF\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:0015562\tPMID:21035449\tIDA\t\tF\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2389\tpvdR\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\tPvdR\tpvdR|PvdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:1990281\tPMID:22187978\tIDA\t\tC\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:1990281\tPMID:22187978\tIMP\t\tC\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:1990281\tPMID:23766114\tIMP\t\tC\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:1990281\tPMID:19906986\tIMP\t\tC\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:1990281\tPMID:19906986\tIDA\t\tC\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:1990281\tPMID:21035449\tIDA\t\tC\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:0015562\tPMID:22187978\tIMP\t\tF\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:0015562\tPMID:22187978\tIDA\t\tF\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:0015562\tPMID:23766114\tIMP\t\tF\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:0015562\tPMID:19906986\tIMP\t\tF\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:0015562\tPMID:19906986\tIDA\t\tF\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:0015562\tPMID:21035449\tIDA\t\tF\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2390\tpvdT\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\tPvdT\tpvdT|PvdT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:1990281\tPMID:22187978\tIMP\t\tC\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:1990281\tPMID:22187978\tIDA\t\tC\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:1990281\tPMID:23766114\tIMP\t\tC\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:1990281\tPMID:19906986\tIDA\t\tC\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:1990281\tPMID:19906986\tIMP\t\tC\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:1990281\tPMID:21035449\tIDA\t\tC\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:0015562\tPMID:22187978\tIMP\t\tF\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:0015562\tPMID:22187978\tIDA\t\tF\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:0015562\tPMID:23766114\tIMP\t\tF\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:0015562\tPMID:19906986\tIDA\t\tF\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:0015562\tPMID:19906986\tIMP\t\tF\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:0015562\tPMID:21035449\tIDA\t\tF\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2391\topmQ\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2392\tpvdP\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tPvdP\tpvdP|PvdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2392\tpvdP\t\tGO:0004503\tPMID:24816606\tIDA\t\tF\tPvdP\tpvdP|PvdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2392\tpvdP\t\tGO:0002049\tPMID:24816606\tIDA\t\tP\tPvdP\tpvdP|PvdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2392\tpvdP\t\tGO:0002049\tPMID:19787431\tIMP\t\tP\tPvdP\tpvdP|PvdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2392\tpvdP\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\tPvdP\tpvdP|PvdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2392\tpvdP\t\tGO:0002049\tPMID:12207696\tIMP\t\tP\tPvdP\tpvdP|PvdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2393\tPA2393\t\tGO:0016805\tPMID:15687295\tISS\t\tF\tputative dipeptidase\tputative dipeptidase|probable dipeptidase precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2393\tPA2393\t\tGO:0016805\tPMID:1313537\tISS\t\tF\tputative dipeptidase\tputative dipeptidase|probable dipeptidase precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2393\tPA2393\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\tputative dipeptidase\tputative dipeptidase|probable dipeptidase precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2393\tPA2393\t\tGO:0016805\tPMID:12207696\tISS\t\tF\tputative dipeptidase\tputative dipeptidase|probable dipeptidase precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2393\tPA2393\t\tGO:0002049\tPMID:12207696\tIMP\t\tP\tputative dipeptidase\tputative dipeptidase|probable dipeptidase precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2394\tpvdN\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tPvdN\tpvdN|PvdN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2394\tpvdN\t\tGO:0002049\tPMID:16621825\tIDA\t\tP\tPvdN\tpvdN|PvdN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2394\tpvdN\t\tGO:0030288\tPMID:16621825\tIDA\t\tC\tPvdN\tpvdN|PvdN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2394\tpvdN\t\tGO:0002049\tPMID:19787431\tIMP\t\tP\tPvdN\tpvdN|PvdN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2394\tpvdN\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\tPvdN\tpvdN|PvdN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2394\tpvdN\t\tGO:0008483\tPMID:12207696\tISS\t\tF\tPvdN\tpvdN|PvdN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2394\tpvdN\t\tGO:0002049\tPMID:12207696\tIMP\t\tP\tPvdN\tpvdN|PvdN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2395\tpvdO\t\tGO:0002049\tPMID:19787431\tIMP\t\tP\tPvdO\tpvdO|PvdO\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2395\tpvdO\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\tPvdO\tpvdO|PvdO\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2395\tpvdO\t\tGO:0002049\tPMID:12207696\tIMP\t\tP\tPvdO\tpvdO|PvdO\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2396\tpvdF\t\tGO:0002049\tPMID:11390682\tIMP\t\tP\tpyoverdine synthetase F\tpvdF|pyoverdine synthetase F\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2396\tpvdF\t\tGO:0033608\tPMID:11390682\tIDA\t\tF\tpyoverdine synthetase F\tpvdF|pyoverdine synthetase F\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2397\tpvdE\t\tGO:0002049\tPMID:8918232\tIMP\t\tP\tpyoverdine biosynthesis protein PvdE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2397\tpvdE\t\tGO:0042626\tPMID:8918232\tISS\t\tF\tpyoverdine biosynthesis protein PvdE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2397\tpvdE\t\tGO:0042626\tPMID:19787431\tIMP\t\tF\tpyoverdine biosynthesis protein PvdE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2398\tfpvA\t\tGO:0038023\tPMID:1903349\tIMP\t\tF\tferripyoverdine receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2398\tfpvA\t\tGO:0038023\tPMID:8335619\tISS\t\tF\tferripyoverdine receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2398\tfpvA\t\tGO:0002049\tPMID:12029043\tIMP\t\tP\tferripyoverdine receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2398\tfpvA\t\tGO:0038023\tPMID:15968062\tIMP\t\tF\tferripyoverdine receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2398\tfpvA\t\tGO:0038023\tPMID:18641139\tIDA\t\tF\tferripyoverdine receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2399\tpvdD\t\tGO:0002049\tPMID:9770291\tIMP\t\tP\tpyoverdine synthetase D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2399\tpvdD\t\tGO:0003824\tPMID:9770291\tIMP\t\tF\tpyoverdine synthetase D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2399\tpvdD\t\tGO:0003824\tPMID:12700264\tIMP\t\tF\tpyoverdine synthetase D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2399\tpvdD\t\tGO:0003824\tPMID:15271355\tIMP\t\tF\tpyoverdine synthetase D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2399\tpvdD\t\tGO:0002049\tPMID:12700264\tIMP\t\tP\tpyoverdine synthetase D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2399\tpvdD\t\tGO:0002049\tPMID:15271355\tIMP\t\tP\tpyoverdine synthetase D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2399\tpvdD\t\tGO:0003824\tPMID:7798141\tISA\tGenBank:AAB60198.1\tF\tpyoverdine synthetase D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2400\tpvdJ\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tPvdJ\tPA2401|PvdJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2400\tpvdJ\t\tGO:0003824\tPMID:19854904\tIMP\t\tF\tPvdJ\tPA2401|PvdJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2400\tpvdJ\t\tGO:0002049\tPMID:19854904\tIMP\t\tP\tPvdJ\tPA2401|PvdJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2403\tfpvG\t\tGO:0002049\tPMID:12207696\tIMP\t\tP\tFpvG\tfpvG|FpvG|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2412\tPA2412\t\tGO:0002049\tPMID:17502378\tIMP\t\tP\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2412\tPA2412\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2412\tPA2412\t\tGO:0016790\tPMID:12207696\tISS\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2412\tPA2412\t\tGO:0002049\tPMID:12207696\tIMP\t\tP\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2413\tpvdH\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tL-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tpvdH|L-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2413\tpvdH\t\tGO:0008483\tPMID:15317763\tIDA\t\tF\tL-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tpvdH|L-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2413\tpvdH\t\tGO:0002049\tPMID:15317763\tIDA\t\tP\tL-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tpvdH|L-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2413\tpvdH\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\tL-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tpvdH|L-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2416\ttreA\t\tGO:0015927\tPMID:2820965\tIMP\t\tF\tperiplasmic trehalase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2416\ttreA\t\tGO:0044248\tPMID:2820965\tIMP\t\tP\tperiplasmic trehalase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2424\tpvdL\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tPvdL\tpvdL|PvdL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2424\tpvdL\t\tGO:0003824\tPMID:21892836\tIDA\t\tF\tPvdL\tpvdL|PvdL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2424\tpvdL\t\tGO:0002049\tPMID:21892836\tIDA\t\tP\tPvdL\tpvdL|PvdL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2424\tpvdL\t\tGO:0003824\tPMID:19854904\tIMP\t\tF\tPvdL\tpvdL|PvdL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2424\tpvdL\t\tGO:0002049\tPMID:19854904\tIMP\t\tP\tPvdL\tpvdL|PvdL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2424\tpvdL\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\tPvdL\tpvdL|PvdL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2424\tpvdL\t\tGO:0003824\tPMID:12354233\tIDA\t\tF\tPvdL\tpvdL|PvdL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2424\tpvdL\t\tGO:0002049\tPMID:12354233\tIDA\t\tP\tPvdL\tpvdL|PvdL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2425\tpvdG\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tPvdG\tpvdG|PvdG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2425\tpvdG\t\tGO:0002049\tPMID:12686626\tIMP\t\tP\tPvdG\tpvdG|PvdG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:0016987\tPMID:16077110\tISS\t\tF\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:1900378\tPMID:15073293\tIMP\t\tP\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:0006355\tPMID:7751284\tIMP\t\tP\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:1900378\tPMID:18047579\tIDA\t\tP\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:1900378\tPMID:18048935\tIMP\t\tP\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:1900378\tPMID:10692351\tIDA\t\tP\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:0016987\tPMID:10692351\tIDA\t\tF\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:1900378\tPMID:7651323\tIMP\t\tP\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:1900378\tPMID:8636031\tIMP\t\tP\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:0016987\tPMID:10873648\tIDA\t\tF\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:0005515\tPMID:16077110\tIPI\tPseudoCAP:PA2388\tF\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2432\tbexR\t\tGO:0040029\tPMID:20041030\tEXP\t\tP\tbistable expression regulator, BexR\tbexR|bistable expression regulator, BexR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2442\tgcvT2\t\tGO:0004047\tPMID:8188235\tISS\t\tF\tglycine cleavage system protein T2\taminomethyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2443\tsdaA\t\tGO:0003941\tPMID:2504697\tISS\t\tF\tL-serine dehydratase\tL-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2449\tgcsR\t\tGO:1900378\tPMID:23457254\tIMP\t\tP\tGcsR\ttranscriptional regulator|gcsR|GcsR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2449\tgcsR\t\tGO:0045764\tPMID:23457254\tIMP\t\tP\tGcsR\ttranscriptional regulator|gcsR|GcsR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2449\tgcsR\t\tGO:0043565\tPMID:27303730\tIDA\t\tF\tGcsR\ttranscriptional regulator|gcsR|GcsR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2449\tgcsR\t\tGO:0016791\tPMID:27303730\tIDA\t\tF\tGcsR\ttranscriptional regulator|gcsR|GcsR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2449\tgcsR\t\tGO:0006546\tPMID:27303730\tIMP\t\tP\tGcsR\ttranscriptional regulator|gcsR|GcsR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2466\tfoxA\t\tGO:0015344\tPMID:16484199\tIMP\t\tF\tFerrioxamine receptor FoxA\toptS|foxA|Ferrioxamine receptor FoxA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2466\tfoxA\t\tGO:0015344\tPMID:16484199\tIMP\t\tF\tFerrioxamine receptor FoxA\toptS|foxA|Ferrioxamine receptor FoxA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2466\tfoxA\t\tGO:0038023\tPMID:16484199\tIMP\t\tF\tFerrioxamine receptor FoxA\toptS|foxA|Ferrioxamine receptor FoxA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2466\tfoxA\t\tGO:0015891\tPMID:16484199\tIMP\t\tP\tFerrioxamine receptor FoxA\toptS|foxA|Ferrioxamine receptor FoxA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2466\tfoxA\t\tGO:0007166\tPMID:16484199\tIMP\t\tP\tFerrioxamine receptor FoxA\toptS|foxA|Ferrioxamine receptor FoxA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2466\tfoxA\t\tGO:0019867\tPMID:16484199\tIDA\t\tC\tFerrioxamine receptor FoxA\toptS|foxA|Ferrioxamine receptor FoxA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2467\tfoxR\t\tGO:0016989\tPMID:16484199\tIMP\t\tF\tAnti-sigma factor FoxR\tfoxR|Anti-sigma factor FoxR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2467\tfoxR\t\tGO:0034756\tPMID:16484199\tIMP\t\tP\tAnti-sigma factor FoxR\tfoxR|Anti-sigma factor FoxR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2468\tfoxI\t\tGO:0016987\tPMID:16484199\tISS\t\tF\tECF sigma factor FoxI\tfoxI|ECF sigma factor FoxI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2468\tfoxI\t\tGO:0016987\tPMID:16484199\tIMP\t\tF\tECF sigma factor FoxI\tfoxI|ECF sigma factor FoxI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2468\tfoxI\t\tGO:0034756\tPMID:16484199\tIMP\t\tP\tECF sigma factor FoxI\tfoxI|ECF sigma factor FoxI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2468\tfoxI\t\tGO:0005829\tPMID:16484199\tNAS\t\tC\tECF sigma factor FoxI\tfoxI|ECF sigma factor FoxI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2491\tmexS\t\tGO:1900377\tPMID:21075931\tIMP\t\tP\tMexS\tmexS|MexS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2491\tmexS\t\tGO:0050709\tPMID:21075931\tIMP\t\tP\tMexS\tmexS|MexS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2491\tmexS\t\tGO:0034763\tPMID:15687188\tIMP\t\tP\tMexS\tmexS|MexS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2492\tmexT\t\tGO:0050709\tPMID:21075931\tIMP\t\tP\ttranscriptional regulator MexT\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2492\tmexT\t\tGO:0045861\tPMID:21075931\tIMP\t\tP\ttranscriptional regulator MexT\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2492\tmexT\t\tGO:1900377\tPMID:21075931\tIMP\t\tP\ttranscriptional regulator MexT\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2492\tmexT\t\tGO:0044212\tPMID:20727012\tIDA\t\tF\ttranscriptional regulator MexT\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2492\tmexT\t\tGO:0045893\tPMID:10515918\tIMP\t\tP\ttranscriptional regulator MexT\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2493\tmexE\t\tGO:0015238\tPMID:9044268\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexE precursor\tRND multidrug efflux membrane fusion protein MexE precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2494\tmexF\t\tGO:0015238\tPMID:9044268\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexF\tRND multidrug efflux transporter MexF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2495\toprN\t\tGO:0015238\tPMID:9044268\tIDA\t\tF\tMultidrug efflux outer membrane protein OprN precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2509\tcatB\t\tGO:0043639\tPMID:3609743\tISS\t\tP\tmuconate cycloisomerase I\tcis|cis-muconate lactonizing enzyme I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2509\tcatB\t\tGO:0044248\tPMID:3609743\tISS\t\tP\tmuconate cycloisomerase I\tcis|cis-muconate lactonizing enzyme I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2511\tantR\t\tGO:0044212\tPMID:18424436\tIDA\t\tF\tAntR\tantR|AntR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2516\txylZ\t\tGO:0006091\tPMID:1938949\tISS\t\tP\ttoluate 1,2-dioxygenase electron transfer component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2516\txylZ\t\tGO:0018623\tPMID:1938949\tISS\t\tF\ttoluate 1,2-dioxygenase electron transfer component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2516\txylZ\t\tGO:0044248\tPMID:1938949\tISS\t\tP\ttoluate 1,2-dioxygenase electron transfer component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2519\txylS\t\tGO:1901434\tPMID:8473862\tISS\t\tP\ttranscriptional regulator XylS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2523\tczcR\t\tGO:0000156\tPMID:10570969\tISS\t\tF\tCzcR\tCzcR|czcR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2523\tczcR\t\tGO:0032411\tPMID:14679195\tIMP\t\tP\tCzcR\tCzcR|czcR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2523\tczcR\t\tGO:0043902\tPMID:22666466\tIMP\t\tP\tCzcR\tCzcR|czcR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2523\tczcR\t\tGO:1900377\tPMID:22666466\tIMP\t\tP\tCzcR\tCzcR|czcR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2523\tczcR\t\tGO:1900233\tPMID:22666466\tIMP\t\tP\tCzcR\tCzcR|czcR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2523\tczcR\t\tGO:0045862\tPMID:22666466\tIMP\t\tP\tCzcR\tCzcR|czcR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2524\tczcS\t\tGO:0000155\tPMID:10570969\tISS\t\tF\tCzcS\tCzcS|czcS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2532\ttpx\t\tGO:0070301\tPMID:22609922\tIMP\t\tP\tthiol peroxidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2532\ttpx\t\tGO:0008379\tPMID:22609922\tIDA\t\tF\tthiol peroxidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2545\txthA\t\tGO:0008853\tPMID:7885481\tISS\t\tF\texodeoxyribonuclease III\texonuclease III\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2561\tctpH\t\tGO:0006935\tPMID:10852870\tIMP\t\tP\tCtpH\tCtpH|ctpH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2561\tctpH\t\tGO:0010247\tPMID:10852870\tIMP\t\tP\tCtpH\tCtpH|ctpH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2570\tlecA\t\tGO:0006928\tPMID:16689730\tIDA\t\tP\tLecA\tpa1L|PA-I galactophilic lectin|lecA (changed from pa1L)|LecA (changed from PA-I galactophilic lectin)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2570\tlecA\t\tGO:0007157\tPMID:16689730\tIDA\t\tP\tLecA\tpa1L|PA-I galactophilic lectin|lecA (changed from pa1L)|LecA (changed from PA-I galactophilic lectin)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2572\tPA2572\t\tGO:2000145\tPMID:19170727\tIMP\t\tP\tprobable two-component response regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2574\talkB1\t\tGO:0018685\tPMID:11872725\tIGI\t\tF\talkane-1-monooxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2574\talkB1\t\tGO:0043448\tPMID:14574114\tIGI\t\tP\talkane-1-monooxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2579\tkynA\t\tGO:0004833\tPMID:14592712\tISS\t\tF\tL-Tryptophan:oxygen 2,3-oxidoreductase (decyclizing) KynA\tL-Tryptophan:oxygen 2,3-oxidoreductase (decyclizing) KynA|kynA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2580\tPA2580\t\tGO:0034599\tPMID:25085734\tIMP\t\tP\tconserved hypothetical protein\tmdaB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2580\tPA2580\t\tGO:0003955\tPMID:25085734\tIMP\t\tF\tconserved hypothetical protein\tmdaB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2584\tpgsA\t\tGO:0008444\tPMID:3003065\tISS\t\tF\tCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase\tphosphatidylglycerophosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2585\tuvrC\t\tGO:0033683\tPMID:2843804\tISS\t\tP\texcinuclease ABC subunit C\tUvrABC endonuclease subunit C|UvrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2586\tgacA\t\tGO:0000156\tPMID:7604262\tISS\t\tF\tresponse regulator GacA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2586\tgacA\t\tGO:1900233\tPMID:11401724\tIMP\t\tP\tresponse regulator GacA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2587\tpqsH\t\tGO:0044550\tPMID:20662781\tIDA\t\tP\tprobable FAD-dependent monooxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2587\tpqsH\t\tGO:0004497\tPMID:20662781\tIDA\t\tF\tprobable FAD-dependent monooxygenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2590\tPA2590\t\tGO:0038023\tPMID:18086184\tISS\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2590\tPA2590\t\tGO:0007166\tPMID:18086184\tISS\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2590\tPA2590\t\tGO:0019867\tPMID:18086184\tIDA\t\tC\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2591\tvqsR\t\tGO:0043902\tPMID:15073293\tIMP\t\tP\tVqsR\tvqsR|VqsR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2591\tvqsR\t\tGO:1900378\tPMID:15073293\tIMP\t\tP\tVqsR\tvqsR|VqsR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2592\tPA2592\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tprobable periplasmic spermidine/putrescine-binding protein\tpotF5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2611\tcysG\t\tGO:0004851\tPMID:2407234\tISS\t\tF\tsiroheme synthase\turoporphyrinogen III methylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2612\tserS\t\tGO:0006520\tPMID:7537870\tISS\t\tP\tseryl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2612\tserS\t\tGO:0004828\tPMID:7537870\tISS\t\tF\tseryl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2614\tlolA\t\tGO:0044874\tPMID:17350955\tIDA\t\tP\tlipoprotein localization protein LolA\tlipoprotein localization protein LolA|periplasmic chaperone LolA|lolA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2615\tftsK\t\tGO:0071236\tPMID:20679510\tIMP\t\tP\tcell division protein FtsK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2619\tinfA\t\tGO:0003743\tPMID:9135158\tISS\t\tF\tinitiation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2620\tclpA\t\tGO:0006508\tPMID:2185473\tISS\t\tP\tATP-binding protease component ClpA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2621\tclpS\t\tGO:0071978\tPMID:22123702\tIMP\t\tP\tClpS\tClpS|clpS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2621\tclpS\t\tGO:0071236\tPMID:22123702\tIMP\t\tP\tClpS\tClpS|clpS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2621\tclpS\t\tGO:0044010\tPMID:22123702\tIMP\t\tP\tClpS\tClpS|clpS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2621\tclpS\t\tGO:0044011\tPMID:22123702\tIMP\t\tP\tClpS\tClpS|clpS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2623\ticd\t\tGO:0004739\tPMID:2682654\tISS\t\tF\tisocitrate dehydrogenase\ticdA|oxalosuccinate decarboxylase|IDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2623\ticd\t\tGO:0006091\tPMID:2682654\tISS\t\tP\tisocitrate dehydrogenase\ticdA|oxalosuccinate decarboxylase|IDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2623\ticd\t\tGO:0006520\tPMID:2682654\tISS\t\tP\tisocitrate dehydrogenase\ticdA|oxalosuccinate decarboxylase|IDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2623\ticd\t\tGO:0015976\tPMID:2682654\tISS\t\tP\tisocitrate dehydrogenase\ticdA|oxalosuccinate decarboxylase|IDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2623\ticd\t\tGO:0044248\tPMID:2682654\tISS\t\tP\tisocitrate dehydrogenase\ticdA|oxalosuccinate decarboxylase|IDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2626\ttrmU\t\tGO:0030488\tPMID:9811540\tISS\t\tP\ttRNA methyltransferase\tasuE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2634\taceA\t\tGO:1900232\tPMID:23363478\tIMP\t\tP\tisocitrate lyase AceA\taceA|isocitrate lyase|isocitrate lyase AceA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2634\taceA\t\tGO:0004451\tPMID:17319879\tIDA\t\tF\tisocitrate lyase AceA\taceA|isocitrate lyase|isocitrate lyase AceA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2634\taceA\t\tGO:0009405\tPMID:18524916\tIMP\t\tP\tisocitrate lyase AceA\taceA|isocitrate lyase|isocitrate lyase AceA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2649\tnuoN\t\tGO:0071236\tPMID:24041903\tIMP\t\tP\tNADH dehydrogenase I chain N\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2652\tPA2652\t\tGO:0050918\tPMID:17933940\tIMP\t\tP\tmethyl-accepting chemotaxis protein\tmethyl-accepting chemotaxis protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2652\tPA2652\t\tGO:0071310\tPMID:17933940\tIMP\t\tP\tmethyl-accepting chemotaxis protein\tmethyl-accepting chemotaxis protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2652\tPA2652\t\tGO:0006935\tPMID:17933940\tIMP\t\tP\tmethyl-accepting chemotaxis protein\tmethyl-accepting chemotaxis protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2656\tbqsS\t\tGO:0071282\tPMID:22194456\tISS\tPseudoCAP:PA14_29740\tP\ttwo-component sensor BqsS\tcarS|two-component sensor CarS|probable two-component sensor|bqsS|two-component sensor BqsS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2657\tbqsR\t\tGO:0071282\tPMID:22194456\tISS\tPseudoCAP:PA14_29730\tP\ttwo-component response regulator BqsR\tcarR|two-component response regulator CarR|probable two-component response regulator|bqsR|two-component response regulator BqsR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2667\tmvaU\t\tGO:0044212\tPMID:19684136\tIDA\t\tF\tMvaU\tMvaU|mvaU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2667\tmvaU\t\tGO:0010963\tPMID:19684136\tIMP\t\tP\tMvaU\tMvaU|mvaU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2667\tmvaU\t\tGO:1900377\tPMID:19684136\tIMP\t\tP\tMvaU\tMvaU|mvaU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2684\ttse5\t\tGO:0033103\tPMID:24794869\tIMP\t\tP\tTse5\trhs|rhsP1|RhsP1|Tse5|tse5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2684\ttse5\t\tGO:0033103\tPMID:24589350\tIDA\t\tP\tTse5\trhs|rhsP1|RhsP1|Tse5|tse5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2684\ttse5\t\tGO:0097351\tPMID:24794869\tIMP\t\tF\tTse5\trhs|rhsP1|RhsP1|Tse5|tse5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2684\ttse5\t\tGO:0009405\tPMID:24794869\tIMP\t\tP\tTse5\trhs|rhsP1|RhsP1|Tse5|tse5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2684\ttse5\t\tGO:0009405\tPMID:24589350\tIDA\t\tP\tTse5\trhs|rhsP1|RhsP1|Tse5|tse5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2685\tvgrG4\t\tGO:0033103\tPMID:21325275\tIMP\t\tP\tVgrG4\tvgrG1c|VgrG1c\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2685\tvgrG4\t\tGO:0033104\tPMID:21325275\tIMP\t\tC\tVgrG4\tvgrG1c|VgrG1c\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2685\tvgrG4\t\tGO:0033103\tPMID:20114026\tIDA\t\tP\tVgrG4\tvgrG1c|VgrG1c\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2685\tvgrG4\t\tGO:0033104\tPMID:20114026\tIDA\t\tC\tVgrG4\tvgrG1c|VgrG1c\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2686\tpfeR\t\tGO:0000160\tPMID:8808923\tIDA\t\tP\ttwo-component response regulator PfeR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2686\tpfeR\t\tGO:0000156\tPMID:8361354\tISS\t\tF\ttwo-component response regulator PfeR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2686\tpfeR\t\tGO:0044212\tPMID:8361354\tIDA\t\tF\ttwo-component response regulator PfeR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2687\tpfeS\t\tGO:0000160\tPMID:8808923\tIDA\t\tP\ttwo-component sensor PfeS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2687\tpfeS\t\tGO:0000155\tPMID:8361354\tISS\t\tF\ttwo-component sensor PfeS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2688\tpfeA\t\tGO:0042931\tPMID:8419284\tIMP\t\tF\tFerric enterobactin receptor, outer membrane protein PfeA precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2688\tpfeA\t\tGO:0015344\tPMID:8419284\tIMP\t\tF\tFerric enterobactin receptor, outer membrane protein PfeA precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2688\tpfeA\t\tGO:0042930\tPMID:8419284\tIMP\t\tP\tFerric enterobactin receptor, outer membrane protein PfeA precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2688\tpfeA\t\tGO:0015891\tPMID:8419284\tIMP\t\tP\tFerric enterobactin receptor, outer membrane protein PfeA precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2688\tpfeA\t\tGO:0019867\tPMID:8419284\tIDA\t\tC\tFerric enterobactin receptor, outer membrane protein PfeA precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2689\tpfeE\t\tGO:0016788\tPMID:30086222\tIDA\t\tF\testerase, PfeE\tpfeE|esterase, PfeE|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2694\ttrx2\t\tGO:0015036\tPMID:23771858\tISS\t\tF\tTrx2\tTrx2|trx2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2709\tcysK\t\tGO:0004124\tPMID:3062311\tISS\t\tF\tcysteine synthase A\tO-acetylserine sulfhydrolase A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2717\tcpo\t\tGO:0016691\tPMID:8344520\tISS\t\tF\tchloroperoxidase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2738\thimA\t\tGO:0006355\tPMID:7867950\tISS\t\tP\tintegration host factor, alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2738\thimA\t\tGO:0044267\tPMID:7867950\tISS\t\tP\tintegration host factor, alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2742\trpmI\t\tGO:0006412\tPMID:3298224\tISS\t\tP\t50S ribosomal protein L35\tRibosomal protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2749\tendA\t\tGO:0004536\tPMID:1452026\tISS\t\tF\tDNA-specific endonuclease I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2755\teco\t\tGO:0020012\tPMID:29636440\tIDA\t\tP\tecotin precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2761\tPA2761\t\tGO:0031459\tPMID:24097953\tIDA\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2761\tPA2761\t\tGO:1901053\tPMID:24097953\tIDA\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2762\tPA2762\t\tGO:0031459\tPMID:24097953\tIDA\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2771\tPA2771\t\tGO:0052621\tPMID:27388857\tIDA\t\tF\tdiguanylate cyclase with a self-blocked I-site, Dcsbis\tdiguanylate cyclase with a self-blocked I-site, Dcsbis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2780\tbswR\t\tGO:0043565\tPMID:24497189\tIDA\t\tF\tbacterial swarming regulator BswR\tbswR|bacterial swarming regulator BswR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2780\tbswR\t\tGO:0045893\tPMID:24497189\tIDA\t\tP\tbacterial swarming regulator BswR\tbswR|bacterial swarming regulator BswR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2780\tbswR\t\tGO:1900192\tPMID:24497189\tIMP\t\tP\tbacterial swarming regulator BswR\tbswR|bacterial swarming regulator BswR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2780\tbswR\t\tGO:2000146\tPMID:24497189\tIMP\t\tP\tbacterial swarming regulator BswR\tbswR|bacterial swarming regulator BswR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2782\tbamI\t\tGO:0005515\tPMID:25488299\tIPI\tPseudoCAP:PA2783\tF\tbiofilm-associated metzincin Inhibitor, BamI\tbamI|biofilm-associated metzincin Inhibitor, BamI|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2782\tbamI\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tbiofilm-associated metzincin Inhibitor, BamI\tbamI|biofilm-associated metzincin Inhibitor, BamI|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2783\tmep72\t\tGO:0009279\tPMID:24279383\tIDA\t\tC\tMep72\tMep72|mep72\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2783\tmep72\t\tGO:0004175\tPMID:24279383\tIDA\t\tF\tMep72\tMep72|mep72\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2783\tmep72\t\tGO:0008237\tPMID:24279383\tIGI\t\tF\tMep72\tMep72|mep72\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2783\tmep72\t\tGO:0019867\tPMID:25488299\tIDA\t\tC\tMep72\tMep72|mep72\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2783\tmep72\t\tGO:0005515\tPMID:25488299\tIPI\tPseudoCAP:PA2782\tF\tMep72\tMep72|mep72\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2783\tmep72\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tMep72\tMep72|mep72\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2783\tmep72\t\tGO:0015628\tPMID:25488299\tIGI\t\tP\tMep72\tMep72|mep72\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2783\tmep72\t\tGO:0097264\tPMID:25488299\tIDA\t\tP\tMep72\tMep72|mep72\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2783\tmep72\t\tGO:0005515\tPMID:25488299\tIPI\tPseudoCAP:PA1706\tF\tMep72\tMep72|mep72\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2783\tmep72\t\tGO:0005515\tPMID:25488299\tIPI\tPseudoCAP:PA3841\tF\tMep72\tMep72|mep72\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2787\tcpg2\t\tGO:0046657\tPMID:3838935\tISS\t\tP\tcarboxypeptidase G2 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2787\tcpg2\t\tGO:0004180\tPMID:12176387\tISS\tUniProtKB:P45494\tF\tcarboxypeptidase G2 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2796\ttal\t\tGO:0016744\tPMID:7592346\tISS\t\tF\ttransaldolase\tdihydroxyacetone transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2796\ttal\t\tGO:0015976\tPMID:7592346\tISS\t\tP\ttransaldolase\tdihydroxyacetone transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2796\ttal\t\tGO:0044248\tPMID:7592346\tISS\t\tP\ttransaldolase\tdihydroxyacetone transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2808\tptrA\t\tGO:0050709\tPMID:15469505\tIMP\t\tP\tPseudomonas type III repressor A\tptrA| New product name: repressor, PtrA|Pseudomonas type III repressor A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2808\tptrA\t\tGO:0045892\tPMID:15469505\tIDA\t\tP\tPseudomonas type III repressor A\tptrA| New product name: repressor, PtrA|Pseudomonas type III repressor A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2808\tptrA\t\tGO:1990169\tPMID:21531801\tIDA\t\tP\tPseudomonas type III repressor A\tptrA| New product name: repressor, PtrA|Pseudomonas type III repressor A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2809\tcopR\t\tGO:0000156\tPMID:17449606\tISS\t\tF\ttwo-component response regulator, CopR\tcopR| two-component response regulator, CopR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2809\tcopR\t\tGO:0045892\tPMID:17449606\tIDA\t\tP\ttwo-component response regulator, CopR\tcopR| two-component response regulator, CopR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2810\tcopS\t\tGO:0000155\tPMID:17449606\tISS\t\tF\ttwo-component sensor, CopS\tcopS| two-component sensor, CopS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2818\tarr\t\tGO:0046677\tPMID:16121184\tIMP\t\tP\taminoglycoside response regulator\tarr|aminoglycoside response regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2818\tarr\t\tGO:1900190\tPMID:16121184\tIDA\t\tP\taminoglycoside response regulator\tarr|aminoglycoside response regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2818\tarr\t\tGO:0004114\tPMID:16121184\tIDA\t\tF\taminoglycoside response regulator\tarr|aminoglycoside response regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2825\tospR\t\tGO:1900407\tPMID:19943895\tIMP\t\tP\tOspR\tospR|OspR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2825\tospR\t\tGO:1900378\tPMID:19943895\tIMP\t\tP\tOspR\tospR|OspR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2827\tPA2827\t\tGO:0009405\tPMID:23687271\tIMP\t\tP\tconserved hypothetical protein\tyeaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2827\tPA2827\t\tGO:1901530\tPMID:23687271\tIMP\t\tP\tconserved hypothetical protein\tyeaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2827\tPA2827\t\tGO:0034599\tPMID:23687271\tIMP\t\tP\tconserved hypothetical protein\tyeaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2827\tPA2827\t\tGO:0008113\tPMID:23687271\tISS\t\tF\tconserved hypothetical protein\tyeaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2830\thtpX\t\tGO:0044183\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\theat shock protein HtpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2830\thtpX\t\tGO:0008237\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\theat shock protein HtpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2830\thtpX\t\tGO:0031072\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\theat shock protein HtpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2830\thtpX\t\tGO:0005886\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tC\theat shock protein HtpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2849\tohrR\t\tGO:0045892\tPMID:20139188\tIMP\t\tP\tOhrR\tohrR|OhrR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2849\tohrR\t\tGO:0044212\tPMID:20139188\tIDA\t\tF\tOhrR\tohrR|OhrR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2849\tohrR\t\tGO:1900407\tPMID:20139188\tIMP\t\tP\tOhrR\tohrR|OhrR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2853\toprI\t\tGO:0019867\tPMID:6183370\tIDA\t\tC\tOuter membrane lipoprotein OprI precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2854\tPA2854\t\tGO:0071972\tPMID:17369299\tISS\t\tF\tconserved hypothetical protein\terfK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2854\tPA2854\t\tGO:0008234\tPMID:19965429\tISS\t\tF\tconserved hypothetical protein\terfK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2856\ttesA\t\tGO:0004064\tPMID:20931591\tIDA\t\tF\tlysophospholipase A\tapeA|lecithinase B|lysophospholipase L1|lysophospholipase A|TesA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2856\ttesA\t\tGO:0004622\tPMID:23874889\tIDA\t\tF\tlysophospholipase A\tapeA|lecithinase B|lysophospholipase L1|lysophospholipase A|TesA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2856\ttesA\t\tGO:0047617\tPMID:8098033\tISS\t\tF\tlysophospholipase A\tapeA|lecithinase B|lysophospholipase L1|lysophospholipase A|TesA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2862\tlipA\t\tGO:0016298\tPMID:1748875\tIDA\t\tF\tlactonizing lipase precursor\ttriacylglycerol lipase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2862\tlipA\t\tGO:0015628\tPMID:7946464\tIDA\t\tP\tlactonizing lipase precursor\ttriacylglycerol lipase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2862\tlipA\t\tGO:0043952\tPMID:7946464\tIDA\t\tP\tlactonizing lipase precursor\ttriacylglycerol lipase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2862\tlipA\t\tGO:0016298\tPMID:3096967\tIDA\t\tF\tlactonizing lipase precursor\ttriacylglycerol lipase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2863\tlipH\t\tGO:0044248\tPMID:1748875\tIDA\t\tP\tlipase modulator protein\tlif\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2866\tmttC\t\tGO:0035473\tPMID:7946464\tISS\t\tF\tsecretion protein MttC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2870\tPA2870\t\tGO:0052621\tPMID:16477007\tIDA\t\tF\tdiguanylate cyclase\tdiguanylate cyclase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2873\ttgpA\t\tGO:0003810\tPMID:23209712\tIDA\t\tF\ttransglutaminase protein A, TgpA\ttgpA|transglutaminase protein A, TgpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2876\tpyrF\t\tGO:0006221\tPMID:2956254\tISS\t\tP\torotidine 5'-phosphate decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2877\tPA2877\t\tGO:0009405\tPMID:24829363\tIMP\t\tP\tprobable transcriptional regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2884\tPA2884\t\tGO:0080120\tPMID:10747800\tISS\tUniProtKB:Q03530\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2884\tPA2884\t\tGO:0008237\tPMID:10747800\tISS\tUniProtKB:Q03530\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2885\tatuR\t\tGO:0045827\tPMID:16820476\tIMP\t\tP\tputative repressor of atu genes\tatuR|putative repressor of atu genes\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2885\tatuR\t\tGO:0046247\tPMID:20487029\tIDA\t\tP\tputative repressor of atu genes\tatuR|putative repressor of atu genes\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2885\tatuR\t\tGO:0003677\tPMID:20487029\tIDA\t\tF\tputative repressor of atu genes\tatuR|putative repressor of atu genes\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2885\tatuR\t\tGO:0045892\tPMID:20487029\tIMP\t\tP\tputative repressor of atu genes\tatuR|putative repressor of atu genes\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2886\tatuA\t\tGO:0046247\tPMID:20490788\tIMP\t\tP\texpressed protein with apparent function in citronellol catabolism\tatuA|expressed protein with apparent function in citronellol catabolism\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2888\tatuC\t\tGO:0047925\tPMID:18469096\tIDA\t\tF\tgeranyl-CoA carboxylase, beta-subunit\tgeranyl-coenzymeA-carboxylase subunit, AtuC|atuC|geranyl-CoA carboxylase, beta-subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2888\tatuC\t\tGO:0046247\tPMID:18469096\tIDA\t\tP\tgeranyl-CoA carboxylase, beta-subunit\tgeranyl-coenzymeA-carboxylase subunit, AtuC|atuC|geranyl-CoA carboxylase, beta-subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2889\tatvR\t\tGO:0034824\tPMID:18310025\tIDA\t\tF\tatypical virulence-related response regulator AtvR\tatuD|putative citronellyl-CoA dehydrogenase involved in catabolism of citronellol|citronellyl-CoA dehydrogenase, AtuD|atvR|atypical virulence-related response regulator AtvR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2889\tatvR\t\tGO:0046247\tPMID:18310025\tIMP\t\tP\tatypical virulence-related response regulator AtvR\tatuD|putative citronellyl-CoA dehydrogenase involved in catabolism of citronellol|citronellyl-CoA dehydrogenase, AtuD|atvR|atypical virulence-related response regulator AtvR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2889\tatvR\t\tGO:0046247\tPMID:18310025\tIDA\t\tP\tatypical virulence-related response regulator AtvR\tatuD|putative citronellyl-CoA dehydrogenase involved in catabolism of citronellol|citronellyl-CoA dehydrogenase, AtuD|atvR|atypical virulence-related response regulator AtvR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2889\tatvR\t\tGO:0035556\tPMID:28533471\tISS\tPseudoCAP:PA14_26570\tP\tatypical virulence-related response regulator AtvR\tatuD|putative citronellyl-CoA dehydrogenase involved in catabolism of citronellol|citronellyl-CoA dehydrogenase, AtuD|atvR|atypical virulence-related response regulator AtvR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2889\tatvR\t\tGO:0071454\tPMID:28533471\tISS\tPseudoCAP:PA14_26570\tP\tatypical virulence-related response regulator AtvR\tatuD|putative citronellyl-CoA dehydrogenase involved in catabolism of citronellol|citronellyl-CoA dehydrogenase, AtuD|atvR|atypical virulence-related response regulator AtvR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2890\tatuE\t\tGO:0046247\tPMID:18310025\tIGC\t\tP\tputative isohexenylglutaconyl-CoA hydratase\tgamma-carboxygeranyl-CoA hydratase|atuE|putative isohexenylglutaconyl-CoA hydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2891\tatuF\t\tGO:0047925\tPMID:18469096\tIDA\t\tF\tgeranyl-CoA carboxylase, alpha-subunit (biotin-containing)\tgamma-carboxygeranyl-CoA hydratase|atuF|geranyl-CoA carboxylase, alpha-subunit (biotin-containing)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2891\tatuF\t\tGO:0046247\tPMID:18469096\tIDA\t\tP\tgeranyl-CoA carboxylase, alpha-subunit (biotin-containing)\tgamma-carboxygeranyl-CoA hydratase|atuF|geranyl-CoA carboxylase, alpha-subunit (biotin-containing)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2892\tatuG\t\tGO:0046247\tPMID:18310025\tIGC\t\tP\tGCase, alpha-subunit (biotin-containing)\tputative short chain dehydrogenase involved in catabolism of citronellol|atuG|putative short chain dehydrogenase involved in catabolism of citronellol\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2895\tsbrR\t\tGO:0016989\tPMID:26620262\tIMP\t\tF\tSbrR\tsbrR|SbrR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2895\tsbrR\t\tGO:2000143\tPMID:26620262\tIMP\t\tP\tSbrR\tsbrR|SbrR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2896\tsbrI\t\tGO:0016987\tPMID:26620262\tIPI\tPseudoCAP:PA2895\tF\tSbrI\tsbrI|SbrI|probable sigma-70 factor, ECF subfamily\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2903\tcobJ\t\tGO:0009236\tPMID:8226690\tISS\t\tP\tprecorrin-3 methylase CobJ\tcbiH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2905\tcobH\t\tGO:0009236\tPMID:1732194\tISS\t\tP\tprecorrin isomerase CobH\tcbiC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2907\tcobL\t\tGO:0009236\tPMID:1732195\tISS\t\tP\tprecorrin-6y-dependent methyltransferase CobL\tcbiT|cbiE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2908\tcbiD\t\tGO:0009236\tPMID:9742226\tISS\t\tP\tcobalamin biosynthetic protein CbiD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2924\thisQ\t\tGO:0015817\tPMID:1733937\tISS\t\tP\thistidine transport system permease HisQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2924\thisQ\t\tGO:0006810\tPMID:1733937\tISS\t\tP\thistidine transport system permease HisQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2924\thisQ\t\tGO:0016020\tPMID:1733937\tISS\t\tC\thistidine transport system permease HisQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2931\tcifR\t\tGO:0045892\tPMID:18458065\tIMP\t\tP\tCifR\tcifR|CifR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2931\tcifR\t\tGO:0044212\tPMID:18458065\tIDA\t\tF\tCifR\tcifR|CifR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2934\tcif\t\tGO:0004301\tPMID:20118260\tIDA\t\tF\tCFTR inhibitory factor, Cif\tcif|CFTR inhibitory factor, Cif\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2934\tcif\t\tGO:0009405\tPMID:16236828\tIDA\t\tP\tCFTR inhibitory factor, Cif\tcif|CFTR inhibitory factor, Cif\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2934\tcif\t\tGO:2000157\tPMID:21455491\tIDA\t\tP\tCFTR inhibitory factor, Cif\tcif|CFTR inhibitory factor, Cif\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2934\tcif\t\tGO:2001226\tPMID:16236828\tIDA\t\tP\tCFTR inhibitory factor, Cif\tcif|CFTR inhibitory factor, Cif\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2939\tPA2939\t\tGO:0015628\tPMID:9642203\tIDA\t\tP\tprobable aminopeptidase\tpepB|pepB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2939\tPA2939\t\tGO:0043952\tPMID:9642203\tIDA\t\tP\tprobable aminopeptidase\tpepB|pepB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2939\tPA2939\t\tGO:0006508\tPMID:11533066\tIDA\t\tP\tprobable aminopeptidase\tpepB|pepB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2950\tpfm\t\tGO:0004318\tPMID:27965638\tIMP\t\tF\tproton motive force protein, PMF\tproton motive force protein, PMF|pfm|fabV|enoyl-acyl-carrier protein reductase FabV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2950\tpfm\t\tGO:0006633\tPMID:27965638\tIMP\tPseudoCAP:PA2950\tP\tproton motive force protein, PMF\tproton motive force protein, PMF|pfm|fabV|enoyl-acyl-carrier protein reductase FabV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2961\tholB\t\tGO:0009360\tPMID:8509334\tISS\t\tC\tDNA polymerase III, delta prime subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2965\tfabF1\t\tGO:0006633\tPMID:9013860\tISS\t\tP\tbeta-ketoacyl-acyl carrier protein synthase II\tFabF protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2966\tacpP\t\tGO:0006633\tPMID:1556094\tISS\t\tP\tacyl carrier protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2967\tfabG\t\tGO:0004316\tPMID:10781572\tIGI\t\tF\t3-oxoacyl-[acyl-carrier-protein] reductase\tFabG protein|beta-ketoacyl acyl carrier protein reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2968\tfabD\t\tGO:0006633\tPMID:10464226\tIDA\t\tP\tmalonyl-CoA-[acyl-carrier-protein] transacylase\tFabD protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2969\tplsX\t\tGO:0006633\tPMID:24224907\tISS\t\tP\tfatty acid biosynthesis protein PlsX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2970\trpmF\t\tGO:0006412\tPMID:2477362\tISS\t\tP\t50S ribosomal protein L32\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2973\tPA2973\t\tGO:0008236\tPMID:18476724\tISS\tUniProtKB:P08395\tF\tprobable peptidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2973\tPA2973\t\tGO:0006465\tPMID:18476724\tISS\tUniProtKB:P08395\tP\tprobable peptidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2973\tPA2973\t\tGO:0005886\tPMID:18476724\tISS\tUniProtKB:P08395\tC\tprobable peptidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2978\tptpA\t\tGO:0006468\tPMID:8550407\tISS\t\tP\tphosphotyrosine protein phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2986\tlolC\t\tGO:0044874\tPMID:17350955\tIDA\t\tP\tlipoprotein localization protein LolC\tlolC|lipoprotein localization protein LolC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2987\tlolD\t\tGO:0044874\tPMID:17350955\tIDA\t\tP\tlipoprotein localization protein LolD\tycfV|lolD|lipoprotein localization protein LolD|probable ATP-binding component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2988\tlolE\t\tGO:0044874\tPMID:17350955\tIDA\t\tP\tlipoprotein localization protein LolE\tlolE|lipoprotein localization protein LolE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3005\tnagZ\t\tGO:0016998\tPMID:10940025\tISS\t\tP\tbeta-N-acetyl-D-glucosaminidase\tycfO\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3006\tpsrA\t\tGO:0045893\tPMID:16428760\tIMP\t\tP\ttranscriptional regulator PsrA\tpsrA|transcriptional regulator PsrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3006\tpsrA\t\tGO:0044212\tPMID:16428760\tIDA\t\tF\ttranscriptional regulator PsrA\tpsrA|transcriptional regulator PsrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3006\tpsrA\t\tGO:0050714\tPMID:16428760\tIMP\t\tP\ttranscriptional regulator PsrA\tpsrA|transcriptional regulator PsrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3006\tpsrA\t\tGO:0006355\tPMID:11371535\tIGI\t\tP\ttranscriptional regulator PsrA\tpsrA|transcriptional regulator PsrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3007\tlexA\t\tGO:0006355\tPMID:1494343\tIDA\t\tP\trepressor protein LexA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3007\tlexA\t\tGO:0009432\tPMID:7027255\tISS\t\tP\trepressor protein LexA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3011\ttopA\t\tGO:0003916\tPMID:7779808\tISS\t\tF\tDNA topoisomerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3028\tmoeA2\t\tGO:0006777\tPMID:9515915\tISS\t\tP\tmolybdenum cofactor biosynthesis protein A2\tmolybdopterin biosynthetic protein MoeA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3032\tsnr1\t\tGO:0042128\tPMID:11222615\tIDA\t\tP\tcytochrome c Snr1\tcytochrome c Hsc|snr1|cytochrome c Snr1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3038\topdQ\t\tGO:0010167\tPMID:26459101\tIDA\t\tP\tOpdQ\topdQ|OpdQ|probable porin|OccK6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3038\topdQ\t\tGO:0071453\tPMID:26459101\tIDA\t\tP\tOpdQ\topdQ|OpdQ|probable porin|OccK6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3044\trocsS2\t\tGO:0000155\tPMID:15659157\tISS\t\tF\tTwo-component sensor RocS2\tTwo-component sensor RocS2|rocsS2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3045\trocA2\t\tGO:0000156\tPMID:15659157\tISS\t\tF\tTwo-component response regulator, RocA2\tTwo-component response regulator, RocA2|rocA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3045\trocA2\t\tGO:0051051\tPMID:21205015\tIMP\t\tP\tTwo-component response regulator, RocA2\tTwo-component response regulator, RocA2|rocA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3047\tPA3047\t\tGO:0042597\tPMID:18266856\tISS\t\tC\tprobable D-alanyl-D-alanine carboxypeptidase\tdacB|probable penicillin-binding protein 4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3047\tPA3047\t\tGO:0004185\tPMID:25495032\tIDA\t\tF\tprobable D-alanyl-D-alanine carboxypeptidase\tdacB|probable penicillin-binding protein 4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3047\tPA3047\t\tGO:0004175\tPMID:25495032\tIDA\t\tF\tprobable D-alanyl-D-alanine carboxypeptidase\tdacB|probable penicillin-binding protein 4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3047\tPA3047\t\tGO:0009252\tPMID:25495032\tIDA\t\tP\tprobable D-alanyl-D-alanine carboxypeptidase\tdacB|probable penicillin-binding protein 4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3049\trmf\t\tGO:0017148\tPMID:2181444\tISS\t\tP\tribosome modulation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3058\tpelG\t\tGO:0044010\tPMID:22176658\tIMP\t\tP\tPelG\tPelG|pelG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3058\tpelG\t\tGO:0045226\tPMID:22176658\tIMP\t\tP\tPelG\tPelG|pelG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3058\tpelG\t\tGO:0015774\tPMID:21991261\tISS\tUniProtKB:Q9KRU4\tP\tPelG\tPelG|pelG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3059\tpelF\t\tGO:0044010\tPMID:23435893\tIDA\t\tP\tPelF\tPelF|pelF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3059\tpelF\t\tGO:0045226\tPMID:23435893\tIMP\t\tP\tPelF\tPelF|pelF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3059\tpelF\t\tGO:0016757\tPMID:23435893\tIDA\t\tF\tPelF\tPelF|pelF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3059\tpelF\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tPelF\tPelF|pelF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3060\tpelE\t\tGO:0044010\tPMID:22176658\tIMP\t\tP\tPelE\tPelE|pelE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3060\tpelE\t\tGO:0045226\tPMID:22176658\tIMP\t\tP\tPelE\tPelE|pelE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3061\tpelD\t\tGO:0044010\tPMID:22176658\tIMP\t\tP\tPelD\tPelD|pelD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3061\tpelD\t\tGO:0045226\tPMID:22176658\tIMP\t\tP\tPelD\tPelD|pelD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3061\tpelD\t\tGO:0035438\tPMID:22605337\tIPI\tCHEBI:49537\tF\tPelD\tPelD|pelD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3061\tpelD\t\tGO:0035438\tPMID:22810222\tIPI\tCHEBI:49537\tF\tPelD\tPelD|pelD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3062\tpelC\t\tGO:0044010\tPMID:22176658\tIMP\t\tP\tPelC\tPelC|pelC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3062\tpelC\t\tGO:0045226\tPMID:22176658\tIMP\t\tP\tPelC\tPelC|pelC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3062\tpelC\t\tGO:0015774\tPMID:17524545\tIMP\t\tP\tPelC\tPelC|pelC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3063\tpelB\t\tGO:0044010\tPMID:22176658\tIMP\t\tP\tPelB\tPelB|pelB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3063\tpelB\t\tGO:0045226\tPMID:22176658\tIMP\t\tP\tPelB\tPelB|pelB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3063\tpelB\t\tGO:0015774\tPMID:20159471\tISS\t\tP\tPelB\tPelB|pelB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3064\tpelA\t\tGO:0019213\tPMID:23504011\tIDA\t\tF\tPelA\tPelA|pelA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3064\tpelA\t\tGO:0044010\tPMID:23504011\tIMP\t\tP\tPelA\tPelA|pelA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3064\tpelA\t\tGO:0045226\tPMID:23504011\tIMP\t\tP\tPelA\tPelA|pelA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3077\tcprR\t\tGO:0000156\tPMID:23006746\tISS\t\tF\tCprR\tcationic peptide resistance regulator|cprR|CprR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3077\tcprR\t\tGO:0071073\tPMID:23006746\tIMP\t\tP\tCprR\tcationic peptide resistance regulator|cprR|CprR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3078\tcprS\t\tGO:0000155\tPMID:23006746\tISS\t\tF\tCprS\tcationic peptide resistance sensor|cprS|CprS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3083\tpepN\t\tGO:0008233\tPMID:3018440\tISS\t\tF\taminopeptidase N\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3095\txcpZ\t\tGO:0015628\tPMID:9818381\tIDA\t\tP\tgeneral secretion pathway protein M\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3095\txcpZ\t\tGO:0015627\tPMID:16168578\tIDA\t\tC\tgeneral secretion pathway protein M\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3096\txcpY\t\tGO:0015628\tPMID:9818381\tIDA\t\tP\tgeneral secretion pathway protein L\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3096\txcpY\t\tGO:0015627\tPMID:16168578\tIDA\t\tC\tgeneral secretion pathway protein L\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3097\txcpX\t\tGO:0015628\tPMID:9818381\tIDA\t\tP\tgeneral secretion pathway protein K\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3097\txcpX\t\tGO:0015627\tPMID:9466253\tIDA\t\tC\tgeneral secretion pathway protein K\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3098\txcpW\t\tGO:0015628\tPMID:9818381\tIDA\t\tP\tgeneral secretion pathway protein J\tpddD|PilD-dependent protein PddD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3098\txcpW\t\tGO:0015627\tPMID:8331069\tIDA\t\tC\tgeneral secretion pathway protein J\tpddD|PilD-dependent protein PddD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3099\txcpV\t\tGO:0015628\tPMID:9818381\tIDA\t\tP\tgeneral secretion pathway protein I\tpddC|PilD-dependent protein PddC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3099\txcpV\t\tGO:0015627\tPMID:8331069\tIDA\t\tC\tgeneral secretion pathway protein I\tpddC|PilD-dependent protein PddC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3100\txcpU\t\tGO:0015628\tPMID:9818381\tIDA\t\tP\tGeneral secretion pathway outer membrane protein H precursor\tpddB|PilD-dependent protein PddB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3100\txcpU\t\tGO:0071978\tPMID:17158671\tIMP\t\tP\tGeneral secretion pathway outer membrane protein H precursor\tpddB|PilD-dependent protein PddB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3100\txcpU\t\tGO:0044010\tPMID:17158671\tIMP\t\tP\tGeneral secretion pathway outer membrane protein H precursor\tpddB|PilD-dependent protein PddB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3100\txcpU\t\tGO:0015627\tPMID:8331069\tIDA\t\tC\tGeneral secretion pathway outer membrane protein H precursor\tpddB|PilD-dependent protein PddB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3101\txcpT\t\tGO:0015628\tPMID:9818381\tIDA\t\tP\tgeneral secretion pathway protein G\tpddA|PilD-dependent protein PddA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3101\txcpT\t\tGO:0015627\tPMID:8331069\tIDA\t\tC\tgeneral secretion pathway protein G\tpddA|PilD-dependent protein PddA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3102\txcpS\t\tGO:0015628\tPMID:9818381\tIDA\t\tP\tgeneral secretion pathway protein F\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3102\txcpS\t\tGO:0015627\tPMID:16168578\tIDA\t\tC\tgeneral secretion pathway protein F\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3103\txcpR\t\tGO:0015628\tPMID:9818381\tIDA\t\tP\tgeneral secretion pathway protein E\ttype II traffic warden ATPase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3103\txcpR\t\tGO:0015627\tPMID:16168578\tIDA\t\tC\tgeneral secretion pathway protein E\ttype II traffic warden ATPase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3104\txcpP\t\tGO:0015628\tPMID:9818381\tIDA\t\tP\tsecretion protein XcpP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3104\txcpP\t\tGO:0015627\tPMID:10383969\tIDA\t\tC\tsecretion protein XcpP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3105\txcpQ\t\tGO:0015628\tPMID:9818381\tIDA\t\tP\tgeneral secretion pathway protein D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3105\txcpQ\t\tGO:0015627\tPMID:9466268\tIDA\t\tC\tgeneral secretion pathway protein D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3107\tmetZ\t\tGO:0009086\tPMID:7704274\tIMP\t\tP\to-succinylhomoserine sulfhydrylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3113\ttrpF\t\tGO:0000162\tPMID:2299982\tISS\t\tP\tN-(5'phosphoribosyl)anthranilate (PRA) isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3113\ttrpF\t\tGO:0008881\tPMID:2299982\tISS\t\tF\tN-(5'phosphoribosyl)anthranilate (PRA) isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3115\tfimV\t\tGO:0015627\tPMID:21527471\tIMP\t\tC\tMotility protein FimV\tfimV|motility protein FimV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3115\tfimV\t\tGO:0044096\tPMID:21097635\tIMP\t\tC\tMotility protein FimV\tfimV|motility protein FimV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3115\tfimV\t\tGO:0042834\tPMID:21097635\tIDA\t\tF\tMotility protein FimV\tfimV|motility protein FimV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3133\tsawR\t\tGO:0048023\tPMID:29146265\tIMP\t\tP\tSawR\tsawR|SawR|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3141\twbpM\t\tGO:0009243\tPMID:10639466\tIMP\t\tP\tnucleotide sugar epimerase/dehydratase WbpM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3141\twbpM\t\tGO:0006045\tPMID:11580835\tIDA\t\tP\tnucleotide sugar epimerase/dehydratase WbpM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3142\tPA3142\t\tGO:0016757\tPMID:9680202\tISS\t\tF\tintegrase\tintegrase|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3143\tPA3143\t\tGO:0016757\tPMID:9680202\tISS\t\tF\ttransposase\ttransposase|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3144\tPA3144\t\tGO:0016757\tPMID:9680202\tISS\t\tF\ttransposase with Helix-turn-helix Hin domain\ttransposase with Helix-turn-helix Hin domain|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3145\twbpL\t\tGO:0016757\tPMID:9680202\tIMP\t\tF\tglycosyltransferase WbpL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3145\twbpL\t\tGO:0009103\tPMID:9680202\tIMP\t\tP\tglycosyltransferase WbpL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3145\twbpL\t\tGO:0009243\tPMID:9680202\tIDA\t\tP\tglycosyltransferase WbpL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3145\twbpL\t\tGO:0016757\tPMID:9680202\tISS\t\tF\tglycosyltransferase WbpL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3146\twbpK\t\tGO:0009243\tPMID:10627048\tIDA\t\tP\tprobable NAD-dependent epimerase/dehydratase WbpK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3146\twbpK\t\tGO:0051287\tPMID:10627048\tISS\tUniProtKB:P0A1P4\tF\tprobable NAD-dependent epimerase/dehydratase WbpK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3147\twbpJ\t\tGO:0016757\tPMID:8939432\tISS\tUniProtKB:Q45380\tF\tprobable glycosyl transferase WbpJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3147\twbpJ\t\tGO:0016020\tPMID:8939432\tISS\tUniProtKB:Q45380\tC\tprobable glycosyl transferase WbpJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3147\twbpJ\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyl transferase WbpJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3147\twbpJ\t\tGO:0044010\tPMID:24412364\tIDA\t\tP\tprobable glycosyl transferase WbpJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3148\twbpI\t\tGO:0000271\tPMID:10930727\tIMP\t\tP\tUDP-N-acetylglucosamine 2-epimerase WbpI\tUDP-N-acetylglucosamine 2-epimerase WbpI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3148\twbpI\t\tGO:0008761\tPMID:10930727\tIMP\t\tF\tUDP-N-acetylglucosamine 2-epimerase WbpI\tUDP-N-acetylglucosamine 2-epimerase WbpI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3148\twbpI\t\tGO:0050378\tPMID:17346239\tEXP\t\tF\tUDP-N-acetylglucosamine 2-epimerase WbpI\tUDP-N-acetylglucosamine 2-epimerase WbpI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3148\twbpI\t\tGO:0009243\tPMID:10930727\tIMP\t\tP\tUDP-N-acetylglucosamine 2-epimerase WbpI\tUDP-N-acetylglucosamine 2-epimerase WbpI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3149\twbpH\t\tGO:0016757\tPMID:8939432\tISS\tUniProtKB:Q45380\tF\tprobable glycosyltransferase WbpH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3149\twbpH\t\tGO:0009243\tPMID:8939432\tISS\tUniProtKB:Q45380\tP\tprobable glycosyltransferase WbpH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3149\twbpH\t\tGO:0043165\tPMID:8939432\tISS\tUniProtKB:Q45380\tP\tprobable glycosyltransferase WbpH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3149\twbpH\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyltransferase WbpH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3150\twbpG\t\tGO:0016787\tPMID:18621892\tIEA\t\tF\tLPS biosynthesis protein WbpG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3150\twbpG\t\tGO:0009103\tPMID:18621892\tIEA\t\tP\tLPS biosynthesis protein WbpG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3150\twbpG\t\tGO:0009276\tPMID:18621892\tIEA\t\tC\tLPS biosynthesis protein WbpG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3151\thisF2\t\tGO:0009243\tPMID:18621892\tEXP\t\tP\timidazoleglycerol-phosphate synthase, cyclase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3152\thisH2\t\tGO:0009243\tPMID:18621892\tEXP\t\tP\tglutamine amidotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0006810\tPMID:9922263\tIDA\t\tP\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0009276\tPMID:9922263\tIDA\t\tC\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0016020\tPMID:9922263\tIDA\t\tC\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0015297\tPMID:24023388\tEXP\t\tF\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0034203\tPMID:20824106\tIDA\t\tP\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0043165\tPMID:22554073\tIDA\t\tP\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0009243\tPMID:9922263\tIDA\t\tP\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0005886\tPMID:24023388\tIDA\t\tC\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0098567\tPMID:20824106\tIDA\t\tC\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0015299\tPMID:24023388\tIDA\t\tF\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0015992\tPMID:24023388\tIDA\t\tP\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0015774\tPMID:8606190\tISS\tRefSeq:NP_461033.1\tP\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3154\twzy\t\tGO:0009103\tPMID:20824106\tIDA\t\tP\tB-band O-antigen polymerase\trfc\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3154\twzy\t\tGO:0009276\tPMID:20824106\tIDA\t\tC\tB-band O-antigen polymerase\trfc\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3154\twzy\t\tGO:0016020\tPMID:20824106\tIDA\t\tC\tB-band O-antigen polymerase\trfc\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3154\twzy\t\tGO:0008755\tPMID:21498511\tIDA\t\tF\tB-band O-antigen polymerase\trfc\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3154\twzy\t\tGO:0009243\tPMID:20824106\tIDA\t\tP\tB-band O-antigen polymerase\trfc\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3154\twzy\t\tGO:0043165\tPMID:8939432\tIDA\t\tP\tB-band O-antigen polymerase\trfc\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3154\twzy\t\tGO:0008755\tPMID:24309320\tIDA\t\tF\tB-band O-antigen polymerase\trfc\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3154\twzy\t\tGO:0043165\tPMID:20418877\tISS\tUniProtKB:P27835\tP\tB-band O-antigen polymerase\trfc\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3154\twzy\t\tGO:0005886\tPMID:21498511\tIDA\t\tC\tB-band O-antigen polymerase\trfc\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3154\twzy\t\tGO:0098567\tPMID:20824106\tIDA\t\tC\tB-band O-antigen polymerase\trfc\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3154\twzy\t\tGO:0016757\tPMID:20418877\tISS\tUniProtKB:P27835\tF\tB-band O-antigen polymerase\trfc\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3155\twbpE\t\tGO:0000271\tPMID:19282284\tIDA\t\tP\tUDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE\tUDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3155\twbpE\t\tGO:0008483\tPMID:19282284\tEXP\t\tF\tUDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE\tUDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3155\twbpE\t\tGO:0006065\tPMID:19282284\tEXP\t\tP\tUDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE\tUDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3155\twbpE\t\tGO:0009243\tPMID:18621892\tEXP\t\tP\tUDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE\tUDP-2-acetamido-2-dideoxy-d-ribo-hex-3-uluronic acid transaminase, wbpE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3156\twbpD\t\tGO:0000271\tPMID:19282284\tIDA\t\tP\tUDP-2-acetamido-3-amino-2,3-dideoxy-d-glucuronic acid N-acetyltransferase, WbpD\tUDP-2-acetamido-3-amino-2,3-dideoxy-d-glucuronic acid N-acetyltransferase, WbpD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3156\twbpD\t\tGO:0016407\tPMID:19282284\tEXP\t\tF\tUDP-2-acetamido-3-amino-2,3-dideoxy-d-glucuronic acid N-acetyltransferase, WbpD\tUDP-2-acetamido-3-amino-2,3-dideoxy-d-glucuronic acid N-acetyltransferase, WbpD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3156\twbpD\t\tGO:0009243\tPMID:16102001\tEXP\t\tP\tUDP-2-acetamido-3-amino-2,3-dideoxy-d-glucuronic acid N-acetyltransferase, WbpD\tUDP-2-acetamido-3-amino-2,3-dideoxy-d-glucuronic acid N-acetyltransferase, WbpD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3156\twbpD\t\tGO:0006065\tPMID:16102001\tEXP\t\tP\tUDP-2-acetamido-3-amino-2,3-dideoxy-d-glucuronic acid N-acetyltransferase, WbpD\tUDP-2-acetamido-3-amino-2,3-dideoxy-d-glucuronic acid N-acetyltransferase, WbpD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3157\tPA3157\t\tGO:0016020\tPMID:12057956\tIEA\t\tC\tprobable acetyltransferase\twbpC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3158\twbpB\t\tGO:0000271\tPMID:19282284\tIDA\t\tP\tUDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase, WbpB\tUDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase,  WbpB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3158\twbpB\t\tGO:0009243\tPMID:1982284\tEXP\t\tP\tUDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase, WbpB\tUDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase,  WbpB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3158\twbpB\t\tGO:0006065\tPMID:18621892\tEXP\t\tP\tUDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase, WbpB\tUDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase,  WbpB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3158\twbpB\t\tGO:0003954\tPMID:18621892\tEXP\t\tF\tUDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase, WbpB\tUDP-2-acetamido-2-deoxy-d-glucuronic acid 3-dehydrogenase,  WbpB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3159\twbpA\t\tGO:0000271\tPMID:15226302\tIDA\t\tP\tUDP-N-acetyl-d-glucosamine 6-Dehydrogenase\tUDP-N-acetyl-d-glucosamine 6-Dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3159\twbpA\t\tGO:0047004\tPMID:15226302\tEXP\t\tF\tUDP-N-acetyl-d-glucosamine 6-Dehydrogenase\tUDP-N-acetyl-d-glucosamine 6-Dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3159\twbpA\t\tGO:0003954\tPMID:18621892\tEXP\t\tF\tUDP-N-acetyl-d-glucosamine 6-Dehydrogenase\tUDP-N-acetyl-d-glucosamine 6-Dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3159\twbpA\t\tGO:0009243\tPMID:18621892\tEXP\t\tP\tUDP-N-acetyl-d-glucosamine 6-Dehydrogenase\tUDP-N-acetyl-d-glucosamine 6-Dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3160\twzz\t\tGO:0009243\tPMID:9045803\tIDA\t\tP\tO-antigen chain length regulator\trol|cld|O-antigen chain length regulator Rol|Wzz|wzz1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3160\twzz\t\tGO:0043165\tPMID:24309320\tIDA\t\tP\tO-antigen chain length regulator\trol|cld|O-antigen chain length regulator Rol|Wzz|wzz1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3160\twzz\t\tGO:0043165\tPMID:12534470\tIDA\t\tP\tO-antigen chain length regulator\trol|cld|O-antigen chain length regulator Rol|Wzz|wzz1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3160\twzz\t\tGO:0043165\tPMID:20418877\tISS\tUniProtKB:P0AG00\tP\tO-antigen chain length regulator\trol|cld|O-antigen chain length regulator Rol|Wzz|wzz1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3160\twzz\t\tGO:0098567\tPMID:9045803\tIDA\t\tC\tO-antigen chain length regulator\trol|cld|O-antigen chain length regulator Rol|Wzz|wzz1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3161\thimD\t\tGO:0006259\tPMID:8892836\tISS\t\tP\tintegration host factor beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3161\thimD\t\tGO:0016070\tPMID:8892836\tISS\t\tP\tintegration host factor beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3161\thimD\t\tGO:0044267\tPMID:8892836\tISS\t\tP\tintegration host factor beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3162\trpsA\t\tGO:0006412\tPMID:9677288\tISS\t\tP\t30S ribosomal protein S1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3163\tcmk\t\tGO:0009117\tPMID:7836281\tISS\t\tP\tcytidylate kinase\tcytidine monophosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3165\thisC2\t\tGO:0000105\tPMID:22232166\tISS\t\tP\thistidinol-phosphate aminotransferase\timidazole acetol-phosphate transaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3166\tpheA\t\tGO:0009094\tPMID:1919506\tISS\t\tP\tchorismate mutase\tprephenate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3167\tserC\t\tGO:0009070\tPMID:8706854\tISS\t\tP\t3-phosphoserine aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3167\tserC\t\tGO:0008615\tPMID:8706854\tISS\t\tP\t3-phosphoserine aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3170\tPA3170\t\tGO:0004000\tPMID:23050701\tIDA\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3174\thutR\t\tGO:0006351\tPMID:22225844\tIDA\t\tP\tHutR\thutR|HutR|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3174\thutR\t\tGO:0006548\tPMID:22225844\tIDA\t\tP\tHutR\thutR|HutR|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3175\thutE\t\tGO:0050415\tPMID:16475788\tIDA\t\tF\tHutE\thutE|HutE|probable arginase family protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3175\thutE\t\tGO:0006548\tPMID:22225844\tIMP\t\tP\tHutE\thutE|HutE|probable arginase family protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3176\tgltS\t\tGO:0005313\tPMID:20557112\tISS\t\tF\tglutamate/sodium ion symporter, GltS\tglutamate/sodium ion symporter, GltS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3177\tPA3177\t\tGO:0052621\tPMID:30082282\tIMP\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3186\toprB\t\tGO:0008643\tPMID:7768797\tIDA\t\tP\tGlucose/carbohydrate outer membrane porin OprB precursor\tD1|carbohydrate-selective porin OprB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3191\tgtrS\t\tGO:0000155\tPMID:8830708\tISS\t\tF\tglucose transport sensor, GtrS\tglucose transport sensor, GtrS|gtrS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3192\tgltR\t\tGO:0000156\tPMID:8830708\tISS\t\tF\ttwo-component response regulator GltR\tTranscriptional regulator GltR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3192\tgltR\t\tGO:0010828\tPMID:8830708\tIMP\t\tP\ttwo-component response regulator GltR\tTranscriptional regulator GltR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3206\tcpxS\t\tGO:0046677\tPMID:30209218\tIMP\t\tP\tCpxS\tcpxS|CpxS|probable two-component sensor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3217\tcyaB\t\tGO:0004016\tPMID:12586068\tIMP\t\tF\tCyaB\tadenylate cyclase|cyaB|CyaB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3217\tcyaB\t\tGO:0006171\tPMID:12586068\tIMP\t\tP\tCyaB\tadenylate cyclase|cyaB|CyaB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3217\tcyaB\t\tGO:0009405\tPMID:14977975\tIMP\t\tP\tCyaB\tadenylate cyclase|cyaB|CyaB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3223\tazoR3\t\tGO:0050446\tPMID:20417637\tISS\t\tF\tAzoR3, azoreductase 3\tazoR3|AzoR3, azoreductase 3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3223\tazoR3\t\tGO:0016655\tPMID:24915188\tIDA\t\tF\tAzoR3, azoreductase 3\tazoR3|AzoR3, azoreductase 3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3225\tPA3225\t\tGO:0044212\tPMID:28584154\tIDA\t\tF\ttranscriptional regulator\ttranscriptional regulator|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3225\tPA3225\t\tGO:0010629\tPMID:28584154\tIMP\t\tP\ttranscriptional regulator\ttranscriptional regulator|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3227\tppiA\t\tGO:0003755\tPMID:2007139\tISS\t\tF\tpeptidyl-prolyl cis-trans isomerase A\tcypH|Rotamase A, PPIase A|Cyclophilin A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3227\tppiA\t\tGO:0044267\tPMID:2007139\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase A\tcypH|Rotamase A, PPIase A|Cyclophilin A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3236\tbetX\t\tGO:0031460\tPMID:19919675\tIMP\t\tP\tBetX\tBetX|betX|betaine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3236\tbetX\t\tGO:0050997\tPMID:19919675\tIDA\t\tF\tBetX\tBetX|betX|betaine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3236\tbetX\t\tGO:0031460\tPMID:19919675\tIMP\t\tP\tBetX\tBetX|betX|betaine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3236\tbetX\t\tGO:0031457\tPMID:19919675\tIMP\t\tP\tBetX\tBetX|betX|betaine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3236\tbetX\t\tGO:0015418\tPMID:19919675\tIDA\t\tF\tBetX\tBetX|betX|betaine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3236\tbetX\t\tGO:0042597\tPMID:19919675\tIDA\t\tC\tBetX\tBetX|betX|betaine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3236\tbetX\t\tGO:0043190\tPMID:19919675\tIDA\t\tC\tBetX\tBetX|betX|betaine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3242\thtrB2\t\tGO:0008913\tPMID:26223882\tIDA\t\tF\ttemperature-regulated acyltransferase HtrB1\thtrB|htrB2|HtrB2|probable lauroyl acyltransferase|temperature-regulated acyltransferase HtrB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3242\thtrB2\t\tGO:0009245\tPMID:26223882\tIDA\t\tP\ttemperature-regulated acyltransferase HtrB1\thtrB|htrB2|HtrB2|probable lauroyl acyltransferase|temperature-regulated acyltransferase HtrB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3257\talgO\t\tGO:0042493\tPMID:1447154\tISS\t\tP\tAlgO\ttsp|algO|prc|AlgO|periplasmic tail-specific protease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3257\talgO\t\tGO:0004252\tPMID:24373018\tISS\tPseudoCAP:PP_1719\tF\tAlgO\ttsp|algO|prc|AlgO|periplasmic tail-specific protease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3257\talgO\t\tGO:0007165\tPMID:24373018\tIMP\t\tP\tAlgO\ttsp|algO|prc|AlgO|periplasmic tail-specific protease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3271\tPA3271\t\tGO:0000160\tPMID:22168309\tISS\tUniProtKB:P0AEC3\tP\tprobable two-component sensor\tprobable sensory transduction histidine kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3271\tPA3271\t\tGO:0000155\tPMID:22168309\tIDA\t\tF\tprobable two-component sensor\tprobable sensory transduction histidine kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3271\tPA3271\t\tGO:1900376\tPMID:22168309\tIMP\t\tP\tprobable two-component sensor\tprobable sensory transduction histidine kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3294\tvgrG4a\t\tGO:0033103\tPMID:21325275\tIGC\t\tP\tVgrG4a\tVgrG4a|vgrG4a\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3294\tvgrG4a\t\tGO:0033104\tPMID:21325275\tIGC\t\tC\tVgrG4a\tVgrG4a|vgrG4a\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3296\tphoA\t\tGO:0004035\tPMID:2129542\tISS\t\tF\talkaline phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3296\tphoA\t\tGO:0015628\tPMID:3138529\tIDA\t\tP\talkaline phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3296\tphoA\t\tGO:0043952\tPMID:3138529\tIDA\t\tP\talkaline phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3297\tPA3297\t\tGO:0006364\tPMID:27014238\tIMP\t\tP\tprobable ATP-dependent helicase\thrpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3297\tPA3297\t\tGO:0046677\tPMID:27014238\tIMP\t\tP\tprobable ATP-dependent helicase\thrpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3299\tfadD1\t\tGO:0042758\tPMID:21042406\tIDA\t\tP\tlong-chain-fatty-acid--CoA ligase\tacyl coenzyme A synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3299\tfadD1\t\tGO:0006631\tPMID:21042406\tIDA\t\tP\tlong-chain-fatty-acid--CoA ligase\tacyl coenzyme A synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3299\tfadD1\t\tGO:0044255\tPMID:21042406\tIDA\t\tP\tlong-chain-fatty-acid--CoA ligase\tacyl coenzyme A synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3308\thepA\t\tGO:0004386\tPMID:9614128\tISS\t\tF\tRNA helicase HepA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3311\tnbdA\t\tGO:0071111\tPMID:23729646\tIDA\t\tF\tNbdA\tNbdA|nbdA|NO-induced biofilm dispersion locus A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3311\tnbdA\t\tGO:0071732\tPMID:23729646\tIMP\t\tP\tNbdA\tNbdA|nbdA|NO-induced biofilm dispersion locus A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3311\tnbdA\t\tGO:0071111\tPMID:23729646\tIDA\t\tF\tNbdA\tNbdA|nbdA|NO-induced biofilm dispersion locus A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3319\tplcN\t\tGO:0015628\tPMID:11726509\tIDA\t\tP\tnon-hemolytic phospholipase C precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3319\tplcN\t\tGO:0016298\tPMID:2120196\tIDA\t\tF\tnon-hemolytic phospholipase C precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3339\tplpD\t\tGO:0016298\tPMID:20192961\tIDA\t\tF\tpatatin-like protein, PlpD\tPlpD| patatin-like protein, PlpD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3339\tplpD\t\tGO:0046819\tPMID:20192961\tIDA\t\tP\tpatatin-like protein, PlpD\tPlpD| patatin-like protein, PlpD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3339\tplpD\t\tGO:0005576\tPMID:20192961\tIDA\t\tC\tpatatin-like protein, PlpD\tPlpD| patatin-like protein, PlpD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3339\tplpD\t\tGO:0009279\tPMID:20192961\tIDA\t\tC\tpatatin-like protein, PlpD\tPlpD| patatin-like protein, PlpD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3343\thsbD\t\tGO:0052621\tPMID:16477007\tIDA\t\tF\tdiguanylate cyclase HsbD\tdiguanylate cyclase|hsbD|diguanylate cyclase HsbD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3344\trecQ\t\tGO:0004386\tPMID:2164680\tISS\t\tF\tATP-dependent DNA helicase RecQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3344\trecQ\t\tGO:0008094\tPMID:2164680\tISS\t\tF\tATP-dependent DNA helicase RecQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3345\thptB\t\tGO:0009927\tPMID:16182517\tIDA\t\tF\tHistidine phosphotransfer protein HptB\tHistidine phosphotransfer protein HptB|hptB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3345\thptB\t\tGO:1900191\tPMID:16182517\tIMP\t\tP\tHistidine phosphotransfer protein HptB\tHistidine phosphotransfer protein HptB|hptB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3345\thptB\t\tGO:0050921\tPMID:16182517\tIMP\t\tP\tHistidine phosphotransfer protein HptB\tHistidine phosphotransfer protein HptB|hptB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3345\thptB\t\tGO:2000145\tPMID:16182517\tIMP\t\tP\tHistidine phosphotransfer protein HptB\tHistidine phosphotransfer protein HptB|hptB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3346\thsbR\t\tGO:0000156\tPMID:16182517\tIDA\t\tF\tHptB-dependent secretion and biofilm regulator HsbR\ttwo-component response regulator|hsbR|HptB-dependent secretion and biofilm regulator HsbR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3351\tflgM\t\tGO:0016989\tPMID:11872701\tIMP\t\tF\tFlgM\tflgM|FlgM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3357\tdsdA\t\tGO:0031363\tPMID:3053699\tISS\t\tP\tD-serine dehydratase\tD-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3357\tdsdA\t\tGO:0008721\tPMID:26957519\tIDA\t\tF\tD-serine dehydratase\tD-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3361\tlecB\t\tGO:0030246\tPMID:15870442\tIDA\t\tF\tfucose-binding lectin PA-IIL\tLecB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3361\tlecB\t\tGO:0044010\tPMID:15870442\tIDA\t\tP\tfucose-binding lectin PA-IIL\tLecB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3363\tamiR\t\tGO:0031564\tPMID:8918468\tIDA\t\tP\taliphatic amidase regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3363\tamiR\t\tGO:0051345\tPMID:2513374\tIMP\t\tP\taliphatic amidase regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3363\tamiR\t\tGO:0034251\tPMID:2495988\tIDA\t\tP\taliphatic amidase regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3363\tamiR\t\tGO:0015976\tPMID:2495988\tIDA\t\tP\taliphatic amidase regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3363\tamiR\t\tGO:0044248\tPMID:2495988\tIDA\t\tP\taliphatic amidase regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3364\tamiC\t\tGO:0051346\tPMID:10893220\tIDA\t\tP\taliphatic amidase expression-regulating protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3364\tamiC\t\tGO:0033218\tPMID:8253087\tIDA\t\tF\taliphatic amidase expression-regulating protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3364\tamiC\t\tGO:0034251\tPMID:7813419\tIDA\t\tP\taliphatic amidase expression-regulating protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3366\tamiE\t\tGO:0015976\tPMID:3108029\tIDA\t\tP\taliphatic amidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3366\tamiE\t\tGO:0043605\tPMID:3108029\tIDA\t\tP\taliphatic amidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3382\tphnE\t\tGO:0006810\tPMID:2155230\tISS\t\tP\tphosphonate transport protein PhnE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3382\tphnE\t\tGO:0019634\tPMID:2155230\tISS\t\tP\tphosphonate transport protein PhnE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:2000147\tPMID:16352829\tIMP\t\tP\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:1900233\tPMID:10476040\tIMP\t\tP\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0044780\tPMID:16952938\tIMP\t\tP\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0001150\tPMID:8899712\tIDA\t\tF\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0000986\tPMID:24603766\tIDA\t\tF\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0032885\tPMID:23354748\tIMP\t\tP\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0032885\tPMID:10476040\tIMP\t\tP\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0009405\tPMID:20709902\tIMP\t\tP\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:1900232\tPMID:24603766\tIMP\t\tP\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0043107\tPMID:16352829\tIMP\t\tP\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:1902201\tPMID:16952938\tIMP\t\tP\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0003677\tPMID:16352829\tIDA\t\tF\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0044212\tPMID:16952938\tIDA\t\tF\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3391\tnosR\t\tGO:0006091\tPMID:1644760\tISS\t\tP\tregulatory protein NosR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3391\tnosR\t\tGO:0019333\tPMID:1644760\tISS\t\tP\tregulatory protein NosR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3392\tnosZ\t\tGO:0019333\tPMID:2170125\tISS\t\tP\tnitrous-oxide reductase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3397\tfprA\t\tGO:0042167\tPMID:17915950\tISS\t\tP\tFprA\tNADPH:ferredoxin reductase|NADP+-dependent ferredoxin reductase|FPR|fprA|fpr|FprA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3397\tfprA\t\tGO:0006091\tPMID:17915950\tISS\t\tP\tFprA\tNADPH:ferredoxin reductase|NADP+-dependent ferredoxin reductase|FPR|fprA|fpr|FprA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3397\tfprA\t\tGO:0042167\tPMID:17915950\tIDA\t\tP\tFprA\tNADPH:ferredoxin reductase|NADP+-dependent ferredoxin reductase|FPR|fprA|fpr|FprA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3406\thasD\t\tGO:0006810\tPMID:9244262\tISS\t\tP\ttransport protein HasD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3406\thasD\t\tGO:0015439\tPMID:9244262\tISS\t\tF\ttransport protein HasD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3408\thasR\t\tGO:0020037\tPMID:10658665\tIDA\t\tF\tHeme uptake outer membrane receptor HasR precursor\tHaem uptake outer membrane receptor HasR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3408\thasR\t\tGO:0015232\tPMID:10658665\tIMP\t\tF\tHeme uptake outer membrane receptor HasR precursor\tHaem uptake outer membrane receptor HasR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3408\thasR\t\tGO:0038023\tPMID:18086184\tISS\tUniProtKB:Q79AD2\tF\tHeme uptake outer membrane receptor HasR precursor\tHaem uptake outer membrane receptor HasR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3408\thasR\t\tGO:0015886\tPMID:10658665\tIMP\t\tP\tHeme uptake outer membrane receptor HasR precursor\tHaem uptake outer membrane receptor HasR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3408\thasR\t\tGO:0007166\tPMID:18086184\tISS\tUniProtKB:Q79AD2\tP\tHeme uptake outer membrane receptor HasR precursor\tHaem uptake outer membrane receptor HasR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3408\thasR\t\tGO:0019867\tPMID:10658665\tIMP\t\tC\tHeme uptake outer membrane receptor HasR precursor\tHaem uptake outer membrane receptor HasR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3409\thasS\t\tGO:0016989\tPMID:18086184\tISS\tUniProtKB:Q79AD3\tF\tHasS\tHasS|hasS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3410\thasI\t\tGO:0016987\tPMID:18086184\tISS\tUniProtKB:Q79AD4\tF\tHasI\tHasI|hasI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3410\thasI\t\tGO:0034756\tPMID:18086184\tISS\tUniProtKB:Q79AD4\tP\tHasI\tHasI|hasI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3410\thasI\t\tGO:0005829\tPMID:18086184\tNAS\t\tC\tHasI\tHasI|hasI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3418\tldh\t\tGO:0050049\tPMID:1400267\tISS\t\tF\tleucine dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3438\tfolE1\t\tGO:0006729\tPMID:1985963\tISS\t\tP\tGTP cyclohydrolase I precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3439\tfolX\t\tGO:0006729\tPMID:19897652\tIDA\t\tP\td-erythro-7,8-dihydroneopterin triphosphate epimerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3450\tlsfA\t\tGO:0051920\tPMID:25329795\tISS\tPseudoCAP:PA14_19490\tF\t1-Cys peroxiredoxin LsfA\tlsfA|1-Cys peroxiredoxin LsfA|probable antioxidant protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3450\tlsfA\t\tGO:0042542\tPMID:25329795\tISS\tPseudoCAP:PA14_19490\tP\t1-Cys peroxiredoxin LsfA\tlsfA|1-Cys peroxiredoxin LsfA|probable antioxidant protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3452\tmqoA\t\tGO:0006091\tPMID:9660197\tISS\t\tP\tmalate:quinone oxidoreductase\tmalate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3452\tmqoA\t\tGO:0006099\tPMID:9660197\tISS\t\tP\tmalate:quinone oxidoreductase\tmalate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3477\trhlR\t\tGO:0046889\tPMID:8144472\tIMP\t\tP\ttranscriptional regulator RhlR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3477\trhlR\t\tGO:0045862\tPMID:8522523\tIMP\t\tP\ttranscriptional regulator RhlR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3477\trhlR\t\tGO:1900378\tPMID:8522523\tIMP\t\tP\ttranscriptional regulator RhlR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3478\trhlB\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT1\tF\trhamnosyltransferase chain B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3484\ttse3\t\tGO:0003796\tPMID:21776080\tIDA\t\tF\tTse3\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3486\tvgrG4b\t\tGO:0033103\tPMID:21325275\tIGC\t\tP\tVgrG4b\tVgrG4b|vgrG4b\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3486\tvgrG4b\t\tGO:0033104\tPMID:21325275\tIGC\t\tC\tVgrG4b\tVgrG4b|vgrG4b\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3487\ttle5\t\tGO:0004630\tPMID:24832454\tIMP\t\tF\tTle5\tpldA|phospholipase D|Tle5|tle5|PldA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3495\tnth\t\tGO:0004519\tPMID:2669955\tISS\t\tF\tendonuclease III\tDNA lyase|deoxyribonuclease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3524\tgloA1\t\tGO:0019243\tPMID:15270717\tISS\t\tP\tlactoylglutathione lyase\tS-D-lactoylglutathione methylglyoxal lyase|ketone-aldehyde mutase|aldoketomutase|glyoxalase I|methylglyoxalase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3527\tpyrC\t\tGO:0006221\tPMID:2885307\tISS\t\tP\tdihydroorotase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3528\trnt\t\tGO:0004532\tPMID:1704882\tISS\t\tF\tribonuclease T\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3528\trnt\t\tGO:0016070\tPMID:1704882\tISS\t\tP\tribonuclease T\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3529\tPA3529\t\tGO:0008785\tPMID:21674802\tIDA\t\tF\talkylhydroperoxide reductase C\ttsaA|alkylhydroperoxide reductase C\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3530\tbfd\t\tGO:0051537\tPMID:17915950\tIDA\t\tF\tbacterioferritin-associated ferredoxin Bfd\tbfd|bacterioferritin-associated ferredoxin|Bfd|bacterioferritin-associated ferredoxin Bfd\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3530\tbfd\t\tGO:0005515\tPMID:19575528\tIPI\tPseudoCAP:PA3531\tF\tbacterioferritin-associated ferredoxin Bfd\tbfd|bacterioferritin-associated ferredoxin|Bfd|bacterioferritin-associated ferredoxin Bfd\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3531\tbfrB\t\tGO:0006880\tPMID:21574546\tIDA\t\tP\tbacterioferritin\tcytochrome b-1 (cytochrome b-557)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3533\tgrxD\t\tGO:0071236\tPMID:25593012\tIMP\t\tP\tGrxD\tydhD|grxD|GrxD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0042121\tPMID:7521247\tIDA\t\tP\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0051287\tPMID:12705829\tIDA\t\tF\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0047919\tPMID:7521247\tIDA\t\tF\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0044010\tPMID:7521247\tIDA\t\tP\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0047919\tPMID:2470755\tIDA\t\tF\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0009607\tPMID:18455339\tIDA\t\tP\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0009628\tPMID:24496793\tIDA\t\tP\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0006970\tPMID:2496102\tIDA\t\tP\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0036460\tPMID:17020580\tIDA\t\tP\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0042121\tPMID:7521247\tIMP\t\tP\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3541\talg8\t\tGO:0042121\tPMID:18524915\tIMP\t\tP\talginate biosynthesis protein Alg8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3541\talg8\t\tGO:0042121\tPMID:8294014\tISS\t\tP\talginate biosynthesis protein Alg8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3541\talg8\t\tGO:0050896\tPMID:8294014\tISS\t\tP\talginate biosynthesis protein Alg8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3541\talg8\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\talginate biosynthesis protein Alg8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3542\talg44\t\tGO:0042121\tPMID:18524915\tIMP\t\tP\talginate biosynthesis protein Alg44\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3542\talg44\t\tGO:0004467\tPMID:16797016\tIDA\t\tF\talginate biosynthesis protein Alg44\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3542\talg44\t\tGO:0009276\tPMID:16797016\tIDA\t\tC\talginate biosynthesis protein Alg44\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3542\talg44\t\tGO:0042121\tPMID:16797016\tIDA\t\tP\talginate biosynthesis protein Alg44\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3542\talg44\t\tGO:0044010\tPMID:16797016\tIDA\t\tP\talginate biosynthesis protein Alg44\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3543\talgK\t\tGO:0042121\tPMID:9457868\tIMP\t\tP\talginate biosynthetic protein AlgK precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3543\talgK\t\tGO:0042121\tPMID:9457868\tIDA\t\tP\talginate biosynthetic protein AlgK precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3543\talgK\t\tGO:0042710\tPMID:9457868\tIDA\t\tP\talginate biosynthetic protein AlgK precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3544\talgE\t\tGO:0042121\tPMID:23335756\tIMP\t\tP\tAlginate production outer membrane protein AlgE precursor\talg76|alginate production protein AlgE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3544\talgE\t\tGO:0016020\tPMID:1743507\tISS\t\tC\tAlginate production outer membrane protein AlgE precursor\talg76|alginate production protein AlgE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3544\talgE\t\tGO:0042121\tPMID:1743507\tISS\t\tP\tAlginate production outer membrane protein AlgE precursor\talg76|alginate production protein AlgE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3544\talgE\t\tGO:0050896\tPMID:10411261\tISS\t\tP\tAlginate production outer membrane protein AlgE precursor\talg76|alginate production protein AlgE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3545\talgG\t\tGO:0042121\tPMID:12581364\tIMP\t\tP\talginate-c5-mannuronan-epimerase AlgG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3545\talgG\t\tGO:0042121\tPMID:8144447\tIDA\t\tP\talginate-c5-mannuronan-epimerase AlgG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3545\talgG\t\tGO:0050896\tPMID:8144447\tIDA\t\tP\talginate-c5-mannuronan-epimerase AlgG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3546\talgX\t\tGO:0042121\tPMID:8550492\tIMP\t\tP\talginate biosynthesis protein AlgX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3546\talgX\t\tGO:0044010\tPMID:15489449\tIDA\t\tP\talginate biosynthesis protein AlgX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3546\talgX\t\tGO:0042121\tPMID:15489449\tIDA\t\tP\talginate biosynthesis protein AlgX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3546\talgX\t\tGO:0042597\tPMID:15489449\tIDA\t\tC\talginate biosynthesis protein AlgX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3546\talgX\t\tGO:0050896\tPMID:15489449\tIDA\t\tP\talginate biosynthesis protein AlgX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3547\talgL\t\tGO:0042121\tPMID:8550492\tIMP\t\tP\tpoly(beta-d-mannuronate) lyase precursor AlgL\tAlginate lyase (AlgL)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3547\talgL\t\tGO:0004794\tPMID:8370530\tIDA\t\tF\tpoly(beta-d-mannuronate) lyase precursor AlgL\tAlginate lyase (AlgL)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3547\talgL\t\tGO:0042122\tPMID:8370530\tIDA\t\tP\tpoly(beta-d-mannuronate) lyase precursor AlgL\tAlginate lyase (AlgL)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3547\talgL\t\tGO:0050896\tPMID:8370530\tIDA\t\tP\tpoly(beta-d-mannuronate) lyase precursor AlgL\tAlginate lyase (AlgL)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3548\talgI\t\tGO:0051979\tPMID:12003941\tIMP\t\tP\talginate o-acetyltransferase AlgI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3549\talgJ\t\tGO:0051979\tPMID:12003941\tIMP\t\tP\talginate o-acetyltransferase AlgJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3549\talgJ\t\tGO:0051979\tPMID:8636017\tIDA\t\tP\talginate o-acetyltransferase AlgJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3549\talgJ\t\tGO:0042121\tPMID:8636017\tIDA\t\tP\talginate o-acetyltransferase AlgJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3549\talgJ\t\tGO:0050896\tPMID:8636017\tIDA\t\tP\talginate o-acetyltransferase AlgJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3550\talgF\t\tGO:0051979\tPMID:12003941\tIMP\t\tP\talginate o-acetyltransferase AlgF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3550\talgF\t\tGO:0051979\tPMID:7934909\tIDA\t\tP\talginate o-acetyltransferase AlgF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3550\talgF\t\tGO:0050896\tPMID:7934909\tIDA\t\tP\talginate o-acetyltransferase AlgF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3551\talgA\t\tGO:0042121\tPMID:1846611\tIMP\t\tP\tphosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase\tAlginate biosynthesis protein AlgA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3551\talgA\t\tGO:0004476\tPMID:1846611\tIDA\t\tF\tphosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase\tAlginate biosynthesis protein AlgA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3551\talgA\t\tGO:0004475\tPMID:1846611\tIDA\t\tF\tphosphomannose isomerase / guanosine 5'-diphospho-D-mannose pyrophosphorylase\tAlginate biosynthesis protein AlgA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3552\tarnB\t\tGO:1901760\tPMID:12704196\tISS\t\tP\tArnB\tpmrH|arnB|ArnB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3553\tarnC\t\tGO:1901760\tPMID:15695810\tISS\t\tP\tArnC\tpmrF|arnC|ArnC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3553\tarnC\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tArnC\tpmrF|arnC|ArnC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3554\tarnA\t\tGO:1901760\tPMID:15695810\tISS\t\tP\tArnA\tPmrI|arnA|ArnA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3555\tarnD\t\tGO:1901760\tPMID:15695810\tISS\t\tP\tArnD\tamrJ|arnD|ArnD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3556\tarnT\t\tGO:1901760\tPMID:11535604\tISS\t\tP\tinner membrane L-Ara4N transferase ArnT\tpqaB|pmrK|arnT|inner membrane L-Ara4N transferase ArnT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3556\tarnT\t\tGO:0009276\tPMID:11535604\tISS\t\tC\tinner membrane L-Ara4N transferase ArnT\tpqaB|pmrK|arnT|inner membrane L-Ara4N transferase ArnT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3556\tarnT\t\tGO:0016020\tPMID:11535604\tISS\t\tC\tinner membrane L-Ara4N transferase ArnT\tpqaB|pmrK|arnT|inner membrane L-Ara4N transferase ArnT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3556\tarnT\t\tGO:0046677\tPMID:11535604\tISS\t\tP\tinner membrane L-Ara4N transferase ArnT\tpqaB|pmrK|arnT|inner membrane L-Ara4N transferase ArnT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3556\tarnT\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT83\tF\tinner membrane L-Ara4N transferase ArnT\tpqaB|pmrK|arnT|inner membrane L-Ara4N transferase ArnT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3557\tarnE\t\tGO:1901760\tPMID:17928292\tISS\t\tP\tArnE\tpmrL|arnE|ArnE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3558\tarnF\t\tGO:1901760\tPMID:17928292\tISS\t\tP\tArnF\tpmrM|arnF|ArnF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3560\tfruA\t\tGO:0032445\tPMID:18833300\tIMP\t\tP\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3562\tfruI\t\tGO:0032445\tPMID:18833300\tIMP\t\tP\tphosphotransferase system transporter enzyme I, FruI\tfruI|ptsI|phosphotransferase system transporter enzyme I, FruI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3563\tfruR\t\tGO:0006355\tPMID:9237914\tISS\t\tP\tfructose transport system repressor FruR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3563\tfruR\t\tGO:0006810\tPMID:9237914\tISS\t\tP\tfructose transport system repressor FruR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3563\tfruR\t\tGO:0015976\tPMID:9237914\tISS\t\tP\tfructose transport system repressor FruR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3563\tfruR\t\tGO:0044248\tPMID:9237914\tISS\t\tP\tfructose transport system repressor FruR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3571\tmmsR\t\tGO:2000284\tPMID:1339433\tIMP\t\tP\ttranscriptional regulator MmsR\tMmsAB operon regulatory protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3574\tnalD\t\tGO:0051051\tPMID:15855496\tIMP\t\tP\tNalD\tnalD|NalD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3574\tnalD\t\tGO:0044212\tPMID:17028276\tIDA\t\tF\tNalD\tnalD|NalD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3574\tnalD\t\tGO:0045892\tPMID:17028276\tIMP\t\tP\tNalD\tnalD|NalD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3574\tnalD\t\tGO:0003677\tPMID:17028276\tIDA\t\tF\tNalD\tnalD|NalD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3574\tnalD\t\tGO:0032410\tPMID:17028276\tIMP\t\tP\tNalD\tnalD|NalD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3574\tnalD\t\tGO:0034763\tPMID:17028276\tIMP\t\tP\tNalD\tnalD|NalD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3583\tglpR\t\tGO:0010677\tPMID:8752340\tIMP\t\tP\tglycerol-3-phosphate regulon repressor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3604\terdR\t\tGO:1900065\tPMID:20093290\tIMP\t\tP\tresponse regulator ErdR\tErdR|response regulator ErdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3604\terdR\t\tGO:0000156\tPMID:20093290\tISS\t\tF\tresponse regulator ErdR\tErdR|response regulator ErdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3604\terdR\t\tGO:0000156\tPMID:20093290\tIDA\t\tF\tresponse regulator ErdR\tErdR|response regulator ErdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3607\tpotA\t\tGO:0015847\tPMID:8416922\tISS\t\tP\tpolyamine transport protein PotA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3608\tpotB\t\tGO:0015847\tPMID:8416922\tISS\t\tP\tpolyamine transport protein PotB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3609\tpotC\t\tGO:0015847\tPMID:8416922\tISS\t\tP\tpolyamine transport protein PotC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3610\tpotD\t\tGO:0015847\tPMID:8416922\tISS\t\tP\tpolyamine transport protein PotD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3617\trecA\t\tGO:0006281\tPMID:2823059\tISS\t\tP\tRecA protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3620\tmutS\t\tGO:0006281\tPMID:1651234\tISS\t\tP\tDNA mismatch repair protein MutS\tfdv\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3622\trpoS\t\tGO:0016987\tPMID:7959068\tISS\t\tF\tsigma factor RpoS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3622\trpoS\t\tGO:1900233\tPMID:20735777\tIMP\t\tP\tsigma factor RpoS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3622\trpoS\t\tGO:1900377\tPMID:10383954\tIMP\t\tP\tsigma factor RpoS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3622\trpoS\t\tGO:2000145\tPMID:10383954\tIMP\t\tP\tsigma factor RpoS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3622\trpoS\t\tGO:1900034\tPMID:10383954\tIMP\t\tP\tsigma factor RpoS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3622\trpoS\t\tGO:1901000\tPMID:10383954\tIMP\t\tP\tsigma factor RpoS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3622\trpoS\t\tGO:1900407\tPMID:10383954\tIMP\t\tP\tsigma factor RpoS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3622\trpoS\t\tGO:0050921\tPMID:15687221\tIMP\t\tP\tsigma factor RpoS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3622\trpoS\t\tGO:0006355\tPMID:10383954\tIDA\t\tP\tsigma factor RpoS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3624\tpcm\t\tGO:0044267\tPMID:9573145\tISS\t\tP\tL-isoaspartate protein carboxylmethyltransferase type II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3624\tpcm\t\tGO:0030091\tPMID:9573145\tISS\t\tP\tL-isoaspartate protein carboxylmethyltransferase type II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3625\tsurE\t\tGO:0030091\tPMID:9785447\tISS\t\tP\tsurvival protein SurE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3628\tPA3628\t\tGO:0046294\tPMID:8892832\tISS\tUniProtKB:A1AXZ2\tP\tputative esterase\tyeiG|putative esterase|probable esterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3628\tPA3628\t\tGO:0052689\tPMID:8892832\tISS\tUniProtKB:A1AXZ2\tF\tputative esterase\tyeiG|putative esterase|probable esterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3629\tadhC\t\tGO:0046294\tPMID:11133961\tISS\tUniProtKB:P45382\tP\talcohol dehydrogenase class III\tglutathione-dependent formaldehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3629\tadhC\t\tGO:0018467\tPMID:11133961\tISS\tUniProtKB:P45382\tF\talcohol dehydrogenase class III\tglutathione-dependent formaldehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3635\teno\t\tGO:0006091\tPMID:8988374\tISS\t\tP\tenolase\tphosphopyruvate hydratase|2-phosphoglycerate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3635\teno\t\tGO:0015976\tPMID:8988374\tISS\t\tP\tenolase\tphosphopyruvate hydratase|2-phosphoglycerate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3635\teno\t\tGO:0044248\tPMID:8988374\tISS\t\tP\tenolase\tphosphopyruvate hydratase|2-phosphoglycerate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3635\teno\t\tGO:0044267\tPMID:8988374\tISS\t\tP\tenolase\tphosphopyruvate hydratase|2-phosphoglycerate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3636\tkdsA\t\tGO:0009276\tPMID:10220877\tIDA\t\tC\t2-dehydro-3-deoxyphosphooctonate aldolase\t3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase|Kdo-8-P synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3636\tkdsA\t\tGO:0015976\tPMID:10220877\tIDA\t\tP\t2-dehydro-3-deoxyphosphooctonate aldolase\t3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase|Kdo-8-P synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3636\tkdsA\t\tGO:0009103\tPMID:10220877\tIDA\t\tP\t2-dehydro-3-deoxyphosphooctonate aldolase\t3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase|Kdo-8-P synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3636\tkdsA\t\tGO:0009103\tPMID:21042030\tIMP\t\tP\t2-dehydro-3-deoxyphosphooctonate aldolase\t3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase|Kdo-8-P synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3636\tkdsA\t\tGO:0036104\tPMID:10220877\tIDA\t\tP\t2-dehydro-3-deoxyphosphooctonate aldolase\t3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase|Kdo-8-P synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3637\tpyrG\t\tGO:0009117\tPMID:3298209\tISS\t\tP\tCTP synthase\tUTP--ammonia ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3640\tdnaE\t\tGO:0034061\tPMID:8375647\tISS\t\tF\tDNA polymerase III, alpha chain\tpolC|DNA nucleotidyltransferase (DNA-directed)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3643\tlpxB\t\tGO:0009103\tPMID:3531165\tISS\t\tP\tlipid A-disaccharide synthase\tpgsB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3643\tlpxB\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT19\tF\tlipid A-disaccharide synthase\tpgsB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3644\tlpxA\t\tGO:0009103\tPMID:1904818\tIDA\t\tP\tUDP-N-acetylglucosamine acyltransferase\tacyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3645\tfabZ\t\tGO:0006633\tPMID:8805534\tISS\t\tP\t(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase\tsefA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3645\tfabZ\t\tGO:0044255\tPMID:8805534\tISS\t\tP\t(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase\tsefA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3646\tlpxD\t\tGO:0016746\tPMID:8293817\tISS\t\tF\tUDP-3-O-[3-hydroxylauroyl] glucosamine N-acyltransferase\tomsA|firA|FirA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3646\tlpxD\t\tGO:0009245\tPMID:25173672\tISS\tPseudoCAP:PA14_17180\tP\tUDP-3-O-[3-hydroxylauroyl] glucosamine N-acyltransferase\tomsA|firA|FirA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3648\topr86\t\tGO:0009279\tPMID:12522254\tISA\tUniProtKB:Q9K1H0\tC\touter membrane protein Opr86\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3648\topr86\t\tGO:1990063\tPMID:12522254\tISA\tUniProtKB:Q9K1H0\tC\touter membrane protein Opr86\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3649\tmucP\t\tGO:0007165\tPMID:21036998\tIDA\t\tP\tMucP\trseP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3649\tmucP\t\tGO:0008237\tPMID:9234758\tISO\tUniProtKB:P0AEH1\tF\tMucP\trseP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3649\tmucP\t\tGO:0005886\tPMID:21036998\tISS\t\tC\tMucP\trseP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3651\tcdsA\t\tGO:0004605\tPMID:2995359\tISS\t\tF\tphosphatidate cytidylyltransferase\tCDP-diglyceride pyrophosphorylase|CDP-diacylglycerol synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3653\tfrr\t\tGO:0006412\tPMID:9973356\tIDA\t\tP\tribosome recycling factor\trrf|ribosome releasing factor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3654\tpyrH\t\tGO:0033862\tPMID:7711027\tISS\t\tF\turidylate kinase\tsmbA|uridine monophosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3655\ttsf\t\tGO:0003746\tPMID:8596629\tISS\t\tF\telongation factor Ts\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3656\trpsB\t\tGO:0003735\tPMID:2459390\tISS\t\tF\t30S ribosomal protein S2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3657\tmap\t\tGO:0004177\tPMID:2651123\tISS\t\tF\tmethionine aminopeptidase\tMAP|peptidase M\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3658\tglnD\t\tGO:0070569\tPMID:1683868\tISS\t\tF\tprotein-PII uridylyltransferase\tnfrX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3667\tPA3667\t\tGO:0005515\tPMID:23409003\tIPI\tPseudoCAP:PA3668\tF\tprobable pyridoxal-phosphate dependent enzyme\tNifS-like protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3667\tPA3667\t\tGO:0005515\tPMID:23409003\tIPI\tPseudoCAP:PA1006\tF\tprobable pyridoxal-phosphate dependent enzyme\tNifS-like protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3668\tPA3668\t\tGO:0005515\tPMID:23409003\tIPI\tPseudoCAP:PA3667\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3668\tPA3668\t\tGO:0005515\tPMID:23409003\tIPI\tPseudoCAP:PA1006\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3676\tmexK\t\tGO:0046677\tPMID:12193619\tIMP\t\tP\tMexK\tprobable RND efflux transporter|MexK|mexK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3677\tmexJ\t\tGO:0046677\tPMID:12193619\tIMP\t\tP\tMexJ\tprobable RND efflux membrane fusion protein precursor|MexJ|mexJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3678\tmexL\t\tGO:0045892\tPMID:12193619\tIMP\t\tP\tMexL\tMexL|mexL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3678\tmexL\t\tGO:0043565\tPMID:15855505\tIDA\t\tF\tMexL\tMexL|mexL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3685\tyeaZ\t\tGO:0002949\tPMID:22378793\tISS\tUniProtKB:P76256\tP\tYeaZ\tyeaZ|YeaZ|tRNA threonylcarbamoyladenosine biosynthesis protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3697\tPA3697\t\tGO:0080164\tPMID:18043907\tIMP\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3702\twspR\t\tGO:0052621\tPMID:12426335\tIMP\t\tF\tWspR\tWspR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3702\twspR\t\tGO:0052621\tPMID:16477007\tIDA\t\tF\tWspR\tWspR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3719\tarmR\t\tGO:0032411\tPMID:15387820\tIMP\t\tP\tantirepressor for MexR, ArmR\tarmR|antirepressor for MexR, ArmR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3721\tnalC\t\tGO:0032410\tPMID:15387820\tIMP\t\tP\tNalC\tnalC|NalC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3721\tnalC\t\tGO:0044212\tPMID:22393435\tIDA\t\tF\tNalC\tnalC|NalC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3721\tnalC\t\tGO:0045892\tPMID:22393435\tIMP\t\tP\tNalC\tnalC|NalC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3721\tnalC\t\tGO:0000976\tPMID:22393435\tIDA\t\tF\tNalC\tnalC|NalC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3721\tnalC\t\tGO:0032410\tPMID:15387820\tIMP\t\tP\tNalC\tnalC|NalC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3721\tnalC\t\tGO:0034763\tPMID:15387820\tIMP\t\tP\tNalC\tnalC|NalC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0051542\tPMID:1902216\tIGI\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0060309\tPMID:2842313\tISS\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0060309\tPMID:1902216\tIGI\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0071978\tPMID:18245294\tIMP\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0044010\tPMID:18245294\tIMP\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0071978\tPMID:18245294\tIMP\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0044010\tPMID:18245294\tIMP\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0015628\tPMID:9642203\tIDA\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0043952\tPMID:9642203\tIDA\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0052051\tPMID:15123664\tIDA\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0006508\tPMID:1597429\tIDA\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3725\trecJ\t\tGO:0004518\tPMID:2649886\tISS\t\tF\tsingle-stranded-DNA-specific exonuclease RecJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3736\thom\t\tGO:0004412\tPMID:10220164\tIDA\t\tF\thomoserine dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3736\thom\t\tGO:0009088\tPMID:10220164\tIDA\t\tP\thomoserine dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3737\tdsbC\t\tGO:0006457\tPMID:7536035\tISS\t\tP\tthiol:disulfide interchange protein DsbC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3737\tdsbC\t\tGO:0044267\tPMID:7536035\tISS\t\tP\tthiol:disulfide interchange protein DsbC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3742\trplS\t\tGO:0044391\tPMID:6423642\tISS\t\tC\t50S ribosomal protein L19\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3743\ttrmD\t\tGO:0030488\tPMID:6337136\tISS\t\tP\ttRNA (guanine-N1)-methyltransferase\tTrmD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3744\trimM\t\tGO:0044391\tPMID:9422595\tISS\t\tC\t16S rRNA processing protein\tRimM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3745\trpsP\t\tGO:0044391\tPMID:9288907\tISS\t\tC\t30S ribosomal protein S16\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3745\trpsP\t\tGO:0004530\tPMID:9288907\tISS\t\tF\t30S ribosomal protein S16\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3746\tffh\t\tGO:0046903\tPMID:8898086\tISS\t\tP\tsignal recognition particle protein Ffh\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3756\tPA3756\t\tGO:0071972\tPMID:11555281\tISS\tRefSeq:NP_414759.1\tF\thypothetical protein\tyafK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3756\tPA3756\t\tGO:0008234\tPMID:11555281\tISS\tRefSeq:NP_414759.1\tF\thypothetical protein\tyafK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3757\tnagR\t\tGO:0044212\tPMID:21169497\tIDA\t\tF\tTranscriptional regulator of N-Acetylglucosamine catabolism operon\tTranscriptional regulator of N-Acetylglucosamine catabolism operon|nagR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3757\tnagR\t\tGO:0009893\tPMID:21169497\tIMP\t\tP\tTranscriptional regulator of N-Acetylglucosamine catabolism operon\tTranscriptional regulator of N-Acetylglucosamine catabolism operon|nagR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3760\tPA3760\t\tGO:0015764\tPMID:18833300\tIMP\t\tP\tN-Acetyl-D-Glucosamine phosphotransferase system transporter\tnagF|N-Acetyl-D-Glucosamine phosphotransferase system transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3761\tnagE\t\tGO:0015764\tPMID:18833300\tIMP\t\tP\tN-Acetyl-D-Glucosamine phosphotransferase system transporter\tnagE|N-Acetyl-D-Glucosamine phosphotransferase system transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3769\tguaA\t\tGO:0006177\tPMID:3894345\tISS\t\tP\tGMP synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3774\tPA3774\t\tGO:0016787\tPMID:26956223\tIDA\t\tF\thistone deacetylase-like amidohydrolase\thistone deacetylase-like amidohydrolase|probable acetylpolyamine aminohydrolase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3777\txseA\t\tGO:0008855\tPMID:3021756\tISS\t\tF\texodeoxyribonuclease VII large subunit\tExonuclease VII\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0043683\tPMID:18776008\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0009297\tPMID:18776008\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0046903\tPMID:18776008\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0043683\tPMID:23547883\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0043683\tPMID:8973346\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0009297\tPMID:23547883\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0009297\tPMID:8973346\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0043107\tPMID:18776008\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0043107\tPMID:23547883\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0043107\tPMID:8973346\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0006928\tPMID:23547883\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0030911\tPMID:23547883\tIDA\t\tF\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3807\tndk\t\tGO:0042121\tPMID:8809750\tIDA\t\tP\tnucleoside diphosphate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3807\tndk\t\tGO:0006163\tPMID:8809750\tIDA\t\tP\tnucleoside diphosphate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3807\tndk\t\tGO:0006220\tPMID:8809750\tIDA\t\tP\tnucleoside diphosphate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3807\tndk\t\tGO:0004550\tPMID:8809750\tIDA\t\tF\tnucleoside diphosphate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3809\tfdx2\t\tGO:0006124\tPMID:1317854\tISS\t\tP\tferredoxin [2Fe-2S]\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3810\thscA\t\tGO:0006457\tPMID:8300516\tISS\t\tP\theat shock protein HscA\tHsc66\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3811\thscB\t\tGO:0006457\tPMID:21269500\tISS\t\tP\theat shock protein HscB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3814\tiscS\t\tGO:0005515\tPMID:23409003\tIPI\tPseudoCAP:PA1006\tF\tL-cysteine desulfurase (pyridoxal phosphate-dependent)\tIscS protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3816\tcysE\t\tGO:0016746\tPMID:7510287\tISS\t\tF\tO-acetylserine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3816\tcysE\t\tGO:0051188\tPMID:7510287\tISS\t\tP\tO-acetylserine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3820\tsecF\t\tGO:0046903\tPMID:8112309\tISS\t\tP\tsecretion protein SecF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3821\tsecD\t\tGO:0009306\tPMID:8313900\tISS\t\tP\tsecretion protein SecD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3821\tsecD\t\tGO:0046903\tPMID:8313900\tISS\t\tP\tsecretion protein SecD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3823\ttgt\t\tGO:0008479\tPMID:1706703\tISS\t\tF\tqueuine tRNA-ribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3823\ttgt\t\tGO:0044267\tPMID:1706703\tISS\t\tP\tqueuine tRNA-ribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3825\tPA3825\t\tGO:0071111\tPMID:16477007\tIDA\t\tF\tCyclic-guanylate-specific phosphodiesterase\tCyclic-guanylate-specific phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3827\tlptG\t\tGO:0015921\tPMID:18375759\tISS\tUniProtKB:P0ADC6\tP\tLipopolysaccharide export system permease protein LptG\tyjgQ|lptG|Lipopolysaccharide export system permease protein LptG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3827\tlptG\t\tGO:0042626\tPMID:23138981\tISS\tUniProtKB:P0ADC6\tF\tLipopolysaccharide export system permease protein LptG\tyjgQ|lptG|Lipopolysaccharide export system permease protein LptG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3828\tlptF\t\tGO:0015921\tPMID:18375759\tISS\tUniProtKB:P0AF98\tP\tLipopolysaccharide export system permease protein LptF\tyjgP|lptF|Lipopolysaccharide export system permease protein LptF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3828\tlptF\t\tGO:0042626\tPMID:23138981\tISS\tUniProtKB:P0AF98\tF\tLipopolysaccharide export system permease protein LptF\tyjgP|lptF|Lipopolysaccharide export system permease protein LptF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3831\tpepA\t\tGO:0016070\tPMID:9864319\tIMP\t\tP\tleucine aminopeptidase\tcarP|xerB|phpA|Aminopeptidase A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3831\tpepA\t\tGO:0008238\tPMID:8057849\tISS\t\tF\tleucine aminopeptidase\tcarP|xerB|phpA|Aminopeptidase A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3832\tholC\t\tGO:0009360\tPMID:8389364\tISS\t\tC\tDNA polymerase III, chi subunit\tHolC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3857\tpcs\t\tGO:0050520\tPMID:12169604\tIMP\t\tF\tphosphatidylcholine synthase\tpcs\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3857\tpcs\t\tGO:0050520\tPMID:22363496\tIMP\t\tF\tphosphatidylcholine synthase\tpcs\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3859\tPA3859\t\tGO:0052689\tPMID:15717224\tIDA\t\tF\tcarboxylesterase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3866\tPA3866\t\tGO:0019835\tPMID:7721800\tIDA\t\tP\tPyocin S4\tPyocin S4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3872\tnarI\t\tGO:0009325\tPMID:3053688\tISS\t\tC\trespiratory nitrate reductase gamma chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3873\tnarJ\t\tGO:0009325\tPMID:3053688\tISS\t\tC\trespiratory nitrate reductase delta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3885\ttpbA\t\tGO:0004725\tPMID:19543378\tIDA\t\tF\tprotein tyrosine phosphatase TpbA\ttpbA|protein tyrosine phosphatase TpbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3885\ttpbA\t\tGO:0042597\tPMID:19543378\tIDA\t\tC\tprotein tyrosine phosphatase TpbA\ttpbA|protein tyrosine phosphatase TpbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3885\ttpbA\t\tGO:0004725\tPMID:19543378\tISS\tPseudoCAP:PA14_13660\tF\tprotein tyrosine phosphatase TpbA\ttpbA|protein tyrosine phosphatase TpbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3885\ttpbA\t\tGO:0042597\tPMID:19543378\tISS\tPseudoCAP:PA14_13660\tC\tprotein tyrosine phosphatase TpbA\ttpbA|protein tyrosine phosphatase TpbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3888\topuCD\t\tGO:0031460\tPMID:17660277\tISS\tUniProtKB:Q87WH2\tP\tOpuC ABC transporter, permease protein, OpuCD\tOpuC ABC transporter, permease protein, OpuCD|opuCD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3888\topuCD\t\tGO:0071475\tPMID:17660277\tISS\tUniProtKB:Q87WH2\tP\tOpuC ABC transporter, permease protein, OpuCD\tOpuC ABC transporter, permease protein, OpuCD|opuCD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3888\topuCD\t\tGO:0015226\tPMID:17660277\tISS\tUniProtKB:Q87WH2\tF\tOpuC ABC transporter, permease protein, OpuCD\tOpuC ABC transporter, permease protein, OpuCD|opuCD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3888\topuCD\t\tGO:1902495\tPMID:17660277\tISS\tUniProtKB:Q87WH2\tC\tOpuC ABC transporter, permease protein, OpuCD\tOpuC ABC transporter, permease protein, OpuCD|opuCD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3888\topuCD\t\tGO:0055052\tPMID:17660277\tISS\tUniProtKB:Q87WH2\tC\tOpuC ABC transporter, permease protein, OpuCD\tOpuC ABC transporter, permease protein, OpuCD|opuCD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3888\topuCD\t\tGO:0015838\tPMID:17660277\tISS\tUniProtKB:Q87WH2\tP\tOpuC ABC transporter, permease protein, OpuCD\tOpuC ABC transporter, permease protein, OpuCD|opuCD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3889\topuCC\t\tGO:0031460\tPMID:17660277\tISS\tUniProtKB:Q87WH3\tP\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC|opuCC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3889\topuCC\t\tGO:0042597\tPMID:17660277\tISS\tUniProtKB:Q87WH3\tC\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC|opuCC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3889\topuCC\t\tGO:0071475\tPMID:17660277\tISS\tUniProtKB:Q87WH3\tP\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC|opuCC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3889\topuCC\t\tGO:0015838\tPMID:17660277\tISS\tUniProtKB:Q87WH3\tP\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC|opuCC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3889\topuCC\t\tGO:0015226\tPMID:17660277\tISS\tUniProtKB:Q87WH3\tF\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC|opuCC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3889\topuCC\t\tGO:0043190\tPMID:17660277\tISS\tUniProtKB:Q87WH3\tC\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC\tOpuC ABC transporter, periplasmic substrate-binding protein, OpuCC|opuCC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3890\topuCB\t\tGO:0031460\tPMID:17660277\tISS\tUniProtKB:Q87WH4\tP\tOpuC ABC transporter, permease protein, OpuCB\tOpuC ABC transporter, permease protein, OpuCB|opuCB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3890\topuCB\t\tGO:0071475\tPMID:17660277\tISS\tUniProtKB:Q87WH4\tP\tOpuC ABC transporter, permease protein, OpuCB\tOpuC ABC transporter, permease protein, OpuCB|opuCB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3890\topuCB\t\tGO:0015838\tPMID:17660277\tISS\tUniProtKB:Q87WH4\tP\tOpuC ABC transporter, permease protein, OpuCB\tOpuC ABC transporter, permease protein, OpuCB|opuCB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3890\topuCB\t\tGO:0015226\tPMID:17660277\tISS\tUniProtKB:Q87WH4\tF\tOpuC ABC transporter, permease protein, OpuCB\tOpuC ABC transporter, permease protein, OpuCB|opuCB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3890\topuCB\t\tGO:1902495\tPMID:17660277\tISS\tUniProtKB:Q87WH4\tC\tOpuC ABC transporter, permease protein, OpuCB\tOpuC ABC transporter, permease protein, OpuCB|opuCB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3890\topuCB\t\tGO:0043190\tPMID:17660277\tISS\tUniProtKB:Q87WH4\tC\tOpuC ABC transporter, permease protein, OpuCB\tOpuC ABC transporter, permease protein, OpuCB|opuCB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3891\topuCA\t\tGO:0000166\tPMID:17660277\tISS\tUniProtKB:Q87WH5\tF\tOpuC ABC transporter, ATP-binding protein, OpuCA\tOpuC ABC transporter, ATP-binding protein, OpuCA|opuCA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3891\topuCA\t\tGO:0015418\tPMID:17660277\tIDA\t\tF\tOpuC ABC transporter, ATP-binding protein, OpuCA\tOpuC ABC transporter, ATP-binding protein, OpuCA|opuCA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3891\topuCA\t\tGO:0071475\tPMID:17660277\tIDA\t\tP\tOpuC ABC transporter, ATP-binding protein, OpuCA\tOpuC ABC transporter, ATP-binding protein, OpuCA|opuCA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3891\topuCA\t\tGO:0015838\tPMID:17660277\tIDA\t\tP\tOpuC ABC transporter, ATP-binding protein, OpuCA\tOpuC ABC transporter, ATP-binding protein, OpuCA|opuCA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3891\topuCA\t\tGO:0031459\tPMID:17660277\tIDA\t\tF\tOpuC ABC transporter, ATP-binding protein, OpuCA\tOpuC ABC transporter, ATP-binding protein, OpuCA|opuCA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3891\topuCA\t\tGO:0033266\tPMID:17660277\tISS\tUniProtKB:Q87WH5\tF\tOpuC ABC transporter, ATP-binding protein, OpuCA\tOpuC ABC transporter, ATP-binding protein, OpuCA|opuCA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3891\topuCA\t\tGO:0031460\tPMID:17660277\tIDA\t\tP\tOpuC ABC transporter, ATP-binding protein, OpuCA\tOpuC ABC transporter, ATP-binding protein, OpuCA|opuCA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3891\topuCA\t\tGO:0015226\tPMID:17660277\tISS\tUniProtKB:Q87WH5\tF\tOpuC ABC transporter, ATP-binding protein, OpuCA\tOpuC ABC transporter, ATP-binding protein, OpuCA|opuCA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3891\topuCA\t\tGO:0043190\tPMID:17660277\tIDA\t\tC\tOpuC ABC transporter, ATP-binding protein, OpuCA\tOpuC ABC transporter, ATP-binding protein, OpuCA|opuCA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3899\tfecI\t\tGO:0016987\tPMID:18086184\tISS\tUniProtKB:P23484\tF\tFecI\tFecI|fecI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3899\tfecI\t\tGO:0034756\tPMID:18086184\tISS\tUniProtKB:P23484\tP\tFecI\tFecI|fecI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3899\tfecI\t\tGO:0005829\tPMID:18086184\tNAS\t\tC\tFecI\tFecI|fecI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3900\tfecR\t\tGO:0016989\tPMID:18086184\tISS\tUniProtKB:P23485\tF\tFecR\tFecR|fecR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3901\tfecA\t\tGO:0008199\tPMID:8471824\tISS\t\tF\tFe(III) dicitrate transport protein FecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3901\tfecA\t\tGO:0015682\tPMID:8471824\tISS\t\tP\tFe(III) dicitrate transport protein FecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3901\tfecA\t\tGO:0038023\tPMID:18086184\tISS\tUniProtKB:P13036\tF\tFe(III) dicitrate transport protein FecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3901\tfecA\t\tGO:0015746\tPMID:19118371\tIMP\t\tP\tFe(III) dicitrate transport protein FecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3901\tfecA\t\tGO:0007166\tPMID:18086184\tISS\tUniProtKB:P13036\tP\tFe(III) dicitrate transport protein FecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3909\teddB\t\tGO:0004536\tPMID:20370819\tIDA\t\tF\tExtracelullar DNA degradation protein, EddB\teddB|Extracelullar DNA degradation protein, EddB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3909\teddB\t\tGO:0006308\tPMID:20370819\tIMP\t\tP\tExtracelullar DNA degradation protein, EddB\teddB|Extracelullar DNA degradation protein, EddB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3916\tmoaE\t\tGO:0032324\tPMID:12571226\tISS\t\tP\tmolybdopterin converting factor, large subunit\tmolybdopterin biosynthetic protein E\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3917\tmoaD\t\tGO:0032324\tPMID:12571226\tISS\t\tP\tmolybdopterin converting factor, small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3933\tbetT3\t\tGO:0005275\tPMID:21478341\tIDA\t\tF\tBetT3\tbetT3|BetT3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3933\tbetT3\t\tGO:0033265\tPMID:21478341\tIDA\t\tF\tBetT3\tbetT3|BetT3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3933\tbetT3\t\tGO:0071475\tPMID:21478341\tIDA\t\tP\tBetT3\tbetT3|BetT3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3933\tbetT3\t\tGO:0042426\tPMID:21478341\tIDA\t\tP\tBetT3\tbetT3|BetT3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3933\tbetT3\t\tGO:0016021\tPMID:21478341\tIDA\t\tC\tBetT3\tbetT3|BetT3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3946\trocS1\t\tGO:0000155\tPMID:15659157\tISS\t\tF\ttwo-component sensor RocS1\trocS1|two-component sensor RocS1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3947\trocR\t\tGO:0045892\tPMID:15659157\tIMP\t\tP\tRocR\trocR|RocR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3947\trocR\t\tGO:0071111\tPMID:16477007\tIDA\t\tF\tRocR\trocR|RocR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3948\trocA1\t\tGO:0000156\tPMID:15659157\tISS\t\tF\tTwo-component response regulator RocA1\trocA1|two-component response regulator RocA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3948\trocA1\t\tGO:0045893\tPMID:15659157\tIMP\t\tP\tTwo-component response regulator RocA1\trocA1|two-component response regulator RocA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3976\tthiE\t\tGO:0009228\tPMID:8432721\tISS\t\tP\tthiamin-phosphate pyrophosphorylase\tthiC|thiamin-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3984\tlnt\t\tGO:0042160\tPMID:8344936\tISS\t\tP\tapolipoprotein N-acyltransferase\tcutE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3984\tlnt\t\tGO:0006878\tPMID:8344936\tISS\t\tP\tapolipoprotein N-acyltransferase\tcutE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3987\tleuS\t\tGO:0004823\tPMID:10024478\tISS\t\tF\tleucyl-tRNA synthetase\tleucine--tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3987\tleuS\t\tGO:0006418\tPMID:10024478\tISS\t\tP\tleucyl-tRNA synthetase\tleucine--tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3988\tlptE\t\tGO:0015921\tPMID:24990751\tISS\tUniProtKB:P0ADC1\tP\tLPS-assembly lipoprotein LptE\tlptE|LPS-assembly lipoprotein LptE|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3988\tlptE\t\tGO:0001530\tPMID:24938785\tISS\tUniProtKB:P0ADC1\tF\tLPS-assembly lipoprotein LptE\tlptE|LPS-assembly lipoprotein LptE|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3989\tholA\t\tGO:0009360\tPMID:8505304\tISS\t\tC\tDNA polymerase III, delta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3992\tsltB3\t\tGO:0008933\tPMID:27035839\tIDA\t\tF\tSltB3\tsltB3|SltB3|hypothetical protein|soluble lytic (exolytic) transglycosylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3992\tsltB3\t\tGO:0009254\tPMID:27035839\tIDA\t\tP\tSltB3\tsltB3|SltB3|hypothetical protein|soluble lytic (exolytic) transglycosylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3996\tlis\t\tGO:0051188\tPMID:8444795\tISS\t\tP\tlipoate synthase\tlipA|lipoic acid synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3999\tdacC\t\tGO:0004180\tPMID:19758330\tISS\t\tF\tD-ala-D-ala-carboxypeptidase\tdacD|D-ala-D-ala endopeptidase|penicillin-binding protein 6 precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3999\tdacC\t\tGO:0009252\tPMID:19758330\tISS\t\tP\tD-ala-D-ala-carboxypeptidase\tdacD|D-ala-D-ala endopeptidase|penicillin-binding protein 6 precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4001\tsltB1\t\tGO:0008933\tPMID:11790124\tIDA\t\tF\tsoluble lytic transglycosylase B\tmltB2|membrane-bound lytic transglycosylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4001\tsltB1\t\tGO:0009252\tPMID:11790124\tISS\t\tP\tsoluble lytic transglycosylase B\tmltB2|membrane-bound lytic transglycosylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4002\trodA\t\tGO:0042546\tPMID:9622350\tISS\t\tP\trod shape-determining protein\tmrdB|RodA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4003\tpbpA\t\tGO:0042546\tPMID:9139922\tISS\t\tP\tpenicillin-binding protein 2\tmrdA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4006\tnadD1\t\tGO:0004515\tPMID:10894752\tISS\t\tF\tnicotinate mononucleotide adenylyltransferase NadD1\tybeN|NAD biosynthetic protein NadD|nadD|nicotinic acid mononucleotide adenylyltransferase|nadD1|nicotinate mononucleotide adenylyltransferase NadD1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4007\tproA\t\tGO:0004350\tPMID:7035170\tISS\t\tF\tgamma-glutamyl phosphate reductase\tproB|Glutamate-semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4007\tproA\t\tGO:0006561\tPMID:7035170\tISS\t\tP\tgamma-glutamyl phosphate reductase\tproB|Glutamate-semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4019\tubiX\t\tGO:0004659\tPMID:26083743\tIDA\t\tF\tUbiX\tubiX|UbiX|probable aromatic acid decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4020\tmpl\t\tGO:0071236\tPMID:24041903\tIMP\t\tP\tUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase\tmurein tripeptide ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4024\teutB\t\tGO:0008851\tPMID:18444665\tISS\t\tF\tethanolamine ammonia-lyase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4031\tppa\t\tGO:0004427\tPMID:7971944\tISS\t\tF\tinorganic pyrophosphatase\tipyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4031\tppa\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tinorganic pyrophosphatase\tipyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4034\taqpZ\t\tGO:0015250\tPMID:7493926\tISS\t\tF\taquaporin Z\tbniP|bacterial nodulin-like intrinsic protein|water channel protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4034\taqpZ\t\tGO:0016020\tPMID:7493926\tISS\t\tC\taquaporin Z\tbniP|bacterial nodulin-like intrinsic protein|water channel protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4042\txseB\t\tGO:0008855\tPMID:6350262\tISS\t\tF\texodeoxyribonuclease VII small subunit\tExonuclease VII\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4043\tispA\t\tGO:0033850\tPMID:15809342\tISS\t\tF\tgeranyltranstransferase\tFPP synthase|farnesyldiphosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4047\tribA\t\tGO:0009231\tPMID:9574900\tISS\t\tP\tGTP cyclohydrolase II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4050\tpgpA\t\tGO:0008962\tPMID:1309518\tISS\t\tF\tphosphatidylglycerophosphatase A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4051\tthiL\t\tGO:0009030\tPMID:9188462\tISS\t\tF\tthiamine monophosphate kinase\tthiamin-phosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4052\tnusB\t\tGO:0031554\tPMID:10383769\tISS\t\tP\tNusB protein\tssyB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4053\tribE\t\tGO:0004746\tPMID:8144477\tISS\t\tF\t6,7-dimethyl-8-ribityllumazine synthase\tribH|lumazine synthase|riboflavin synthase beta chain\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4054\tribB\t\tGO:0004746\tPMID:9515916\tISS\t\tF\tGTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase\tribA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4054\tribB\t\tGO:0033215\tPMID:9515916\tISS\t\tP\tGTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase\tribA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4055\tribC\t\tGO:0004746\tPMID:11024263\tISS\t\tF\triboflavin synthase alpha chain\tribB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4056\tribD\t\tGO:0004746\tPMID:18500821\tISS\t\tF\triboflavin-specific deaminase/reductase\tribG|riboflavin biosynthetic protein RibG|bifunctional pyrimidine deaminase/reductase in pathway of riboflavin biosynthesis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4056\tribD\t\tGO:0019239\tPMID:18500821\tISS\t\tF\triboflavin-specific deaminase/reductase\tribG|riboflavin biosynthetic protein RibG|bifunctional pyrimidine deaminase/reductase in pathway of riboflavin biosynthesis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4056\tribD\t\tGO:0042602\tPMID:18500821\tISS\t\tF\triboflavin-specific deaminase/reductase\tribG|riboflavin biosynthetic protein RibG|bifunctional pyrimidine deaminase/reductase in pathway of riboflavin biosynthesis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4057\tnrdR\t\tGO:0051354\tPMID:25909779\tIMP\t\tP\tNrdR\tybaD|nrdR|NrdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4067\toprG\t\tGO:0055085\tPMID:19486157\tIDA\t\tP\tOuter membrane protein OprG precursor\tyciD|ompW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4079\tPA4079\t\tGO:0004090\tPMID:28524228\tIDA\t\tF\tNAD(P)H-dependent carbonyl reductase\tNAD(P)H-dependent carbonyl reductase|probable dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4088\tPA4088\t\tGO:0042286\tPMID:29684343\tEXP\t\tF\tglutamate-1-semialdehyde aminomutase\tglutamate-1-semialdehyde aminomutase|probable aminotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4091\thpaA\t\tGO:1901022\tPMID:8550403\tISS\t\tP\t4-hydroxyphenylacetate 3-monooxygenase large chain\tp-hydroxyphenylacetate 3-hydroxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4091\thpaA\t\tGO:0044248\tPMID:8550403\tISS\t\tP\t4-hydroxyphenylacetate 3-monooxygenase large chain\tp-hydroxyphenylacetate 3-hydroxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4092\thpaC\t\tGO:1901022\tPMID:8550403\tISS\t\tP\t4-hydroxyphenylacetate 3-monooxygenase small chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4092\thpaC\t\tGO:0044248\tPMID:8550403\tISS\t\tP\t4-hydroxyphenylacetate 3-monooxygenase small chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4101\tbfmR\t\tGO:0000156\tPMID:19936057\tISS\t\tF\tBfmR\tbfmR|BfmR|Biofilm maturation Regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4101\tbfmR\t\tGO:1900233\tPMID:19936057\tIMP\t\tP\tBfmR\tbfmR|BfmR|Biofilm maturation Regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4101\tbfmR\t\tGO:0043565\tPMID:25166864\tIDA\t\tF\tBfmR\tbfmR|BfmR|Biofilm maturation Regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4102\tbfmS\t\tGO:0000155\tPMID:19936057\tISS\t\tF\tBfmS\tbfmS|BfmS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4102\tbfmS\t\tGO:0009405\tPMID:25166864\tIMP\t\tP\tBfmS\tbfmS|BfmS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4107\tefhP\t\tGO:0006874\tPMID:24918783\tIMP\t\tP\tEfhP\tEfhP|efhP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4107\tefhP\t\tGO:0071277\tPMID:24918783\tIMP\t\tP\tEfhP\tEfhP|efhP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4108\tPA4108\t\tGO:2000147\tPMID:19170727\tIMP\t\tP\tcyclic di-GMP phosphodiesterase\tcyclic di-GMP phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4108\tPA4108\t\tGO:0071111\tPMID:19170727\tIDA\t\tF\tcyclic di-GMP phosphodiesterase\tcyclic di-GMP phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4108\tPA4108\t\tGO:1900231\tPMID:19170727\tIMP\t\tP\tcyclic di-GMP phosphodiesterase\tcyclic di-GMP phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4109\tampR\t\tGO:1900378\tPMID:22479525\tIMP\t\tP\ttranscriptional regulator AmpR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4109\tampR\t\tGO:1900232\tPMID:22479525\tIMP\t\tP\ttranscriptional regulator AmpR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4109\tampR\t\tGO:0050714\tPMID:22479525\tIMP\t\tP\ttranscriptional regulator AmpR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4109\tampR\t\tGO:0045862\tPMID:22479525\tIMP\t\tP\ttranscriptional regulator AmpR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4109\tampR\t\tGO:0006355\tPMID:22479525\tIDA\t\tP\ttranscriptional regulator AmpR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4110\tampC\t\tGO:0033252\tPMID:8405939\tIDA\t\tP\tbeta-lactamase precursor\tcephalosporinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4110\tampC\t\tGO:0050896\tPMID:8405939\tIDA\t\tP\tbeta-lactamase precursor\tcephalosporinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4114\tPA4114\t\tGO:0032917\tPMID:10359661\tISS\t\tP\tlysine decarboxylase\tbltD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4123\thpcC\t\tGO:1901022\tPMID:8550403\tISS\t\tP\t5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase\thpaE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4123\thpcC\t\tGO:0044248\tPMID:8550403\tISS\t\tP\t5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase\thpaE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4133\tPA4133\t\tGO:0009399\tPMID:8386371\tISS\t\tP\tcytochrome c oxidase subunit (cbb3-type)\tccoN|fixN|cytN|cytochrome c oxidase polypeptide I homolog  (heme b/copper cytochrome c oxidase subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4153\tPA4153\t\tGO:0000721\tPMID:7813883\tISS\t\tF\t2,3-butanediol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4153\tPA4153\t\tGO:0034078\tPMID:7813883\tISS\t\tP\t2,3-butanediol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4156\tfvbA\t\tGO:0015344\tPMID:21546589\tIMP\t\tF\tFvbA\tFvbA|fvbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4156\tfvbA\t\tGO:0015891\tPMID:21546589\tIMP\t\tP\tFvbA\tFvbA|fvbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4158\tfepC\t\tGO:0015685\tPMID:1787794\tISS\t\tP\tferric enterobactin transport protein FepC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4159\tfepB\t\tGO:0015685\tPMID:7551033\tISS\t\tP\tferrienterobactin-binding periplasmic protein precursor FepB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4160\tfepD\t\tGO:0015685\tPMID:1787794\tISS\t\tP\tferric enterobactin transport protein FepD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4161\tfepG\t\tGO:0015685\tPMID:1787794\tISS\t\tP\tferric enterobactin transport protein FepG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4175\tpiv\t\tGO:0006554\tPMID:11237336\tIDA\t\tP\tprotease IV\tprpL|probable endoproteinase Arg-C precursor|Pvds-regulated endoprotease, lysyl class|piv|protease IV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4175\tpiv\t\tGO:0008236\tPMID:11237336\tIDA\t\tF\tprotease IV\tprpL|probable endoproteinase Arg-C precursor|Pvds-regulated endoprotease, lysyl class|piv|protease IV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4175\tpiv\t\tGO:0015628\tPMID:18203852\tIDA\t\tP\tprotease IV\tprpL|probable endoproteinase Arg-C precursor|Pvds-regulated endoprotease, lysyl class|piv|protease IV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4175\tpiv\t\tGO:0043952\tPMID:18203852\tIDA\t\tP\tprotease IV\tprpL|probable endoproteinase Arg-C precursor|Pvds-regulated endoprotease, lysyl class|piv|protease IV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4175\tpiv\t\tGO:0006508\tPMID:9642237\tIDA\t\tP\tprotease IV\tprpL|probable endoproteinase Arg-C precursor|Pvds-regulated endoprotease, lysyl class|piv|protease IV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4175\tpiv\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tprotease IV\tprpL|probable endoproteinase Arg-C precursor|Pvds-regulated endoprotease, lysyl class|piv|protease IV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4178\teftM\t\tGO:0008168\tPMID:26677219\tIDA\t\tF\tSAM-dependent methyltransferase , EftM\teftM|SAM-dependent methyltransferase , EftM|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4184\tsouR\t\tGO:1901053\tPMID:26503852\tIMP\t\tP\tsarcosine oxidation and utilization regulator SouR\tsouR|sarcosine oxidation and utilization regulator SouR|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4196\tbfiR\t\tGO:0000156\tPMID:19936057\tISS\t\tF\tBfiR\tbfiR|BfiR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4197\tbfiS\t\tGO:0000155\tPMID:19936057\tISS\t\tF\tBfiS\tbfiS|BfiS|Biofilm initiation Sensor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4197\tbfiS\t\tGO:1900233\tPMID:19936057\tIMP\t\tP\tBfiS\tbfiS|BfiS|Biofilm initiation Sensor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4201\tddlA\t\tGO:0009252\tPMID:1554356\tISS\t\tP\tD-alanine-D-alanine ligase A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4201\tddlA\t\tGO:0008716\tPMID:1554356\tISS\t\tF\tD-alanine-D-alanine ligase A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4202\tnmoA\t\tGO:0018580\tPMID:25002579\tIDA\t\tF\tnitronate monooxygenase NmoA\tnitronate monooxygenase|nmoA|nitronate monooxygenase NmoA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4206\tmexH\t\tGO:0015238\tPMID:12937010\tIDA\t\tF\tprobable Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor\tprobable RND efflux membrane fusion protein precursor|mexH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4207\tmexI\t\tGO:0015238\tPMID:12937010\tIDA\t\tF\tprobable Resistance-Nodulation-Cell Division (RND) efflux transporter\tprobable RND efflux transporter|mexI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4208\topmD\t\tGO:0015238\tPMID:12937010\tIDA\t\tF\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4209\tphzM\t\tGO:0008757\tPMID:17253782\tIDA\t\tF\tprobable phenazine-specific methyltransferase\tprobable O-methyltransferase|phzM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4210\tphzA1\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tprobable phenazine biosynthesis protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4211\tphzB1\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tprobable phenazine biosynthesis protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4212\tphzC1\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tphenazine biosynthesis protein PhzC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4213\tphzD1\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tphenazine biosynthesis protein PhzD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4214\tphzE1\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tphenazine biosynthesis protein PhzE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4215\tphzF1\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tprobable phenazine biosynthesis protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4216\tphzG1\t\tGO:0002047\tPMID:11591691\tIDA\t\tP\tprobable pyridoxamine 5'-phosphate oxidase\tprobable phenazine biosynthesis protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4217\tphzS\t\tGO:0004497\tPMID:17012792\tIDA\t\tF\tflavin-containing monooxygenase\tprobable FAD-dependent monooxygenase|phzS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4218\tampP\t\tGO:0022857\tPMID:21192796\tIDA\t\tF\tAmpP\tfptX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4218\tampP\t\tGO:0046677\tPMID:21192796\tIDA\t\tP\tAmpP\tfptX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4218\tampP\t\tGO:0009276\tPMID:21192796\tIDA\t\tC\tAmpP\tfptX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4218\tampP\t\tGO:0033252\tPMID:21192796\tIDA\t\tP\tAmpP\tfptX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4229\tpchC\t\tGO:0042864\tPMID:15375116\tIMP\t\tP\tpyochelin biosynthetic protein PchC\tthioesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4230\tpchB\t\tGO:0009697\tPMID:7500944\tIDA\t\tP\tsalicylate biosynthesis protein PchB\tisochorismate-pyruvate lyase|chorismate mutase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4231\tpchA\t\tGO:0009697\tPMID:7500944\tIDA\t\tP\tsalicylate biosynthesis isochorismate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4231\tpchA\t\tGO:0008909\tPMID:12624097\tIDA\t\tF\tsalicylate biosynthesis isochorismate synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4235\tftnA\t\tGO:0006826\tPMID:21574546\tIDA\t\tP\tbacterial ferritin\tbacterial ferritin|ftnA|FtnA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4235\tftnA\t\tGO:0006880\tPMID:21574546\tIDA\t\tP\tbacterial ferritin\tbacterial ferritin|ftnA|FtnA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4235\tftnA\t\tGO:0008199\tPMID:21574546\tISS\t\tF\tbacterial ferritin\tbacterial ferritin|ftnA|FtnA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4236\tkatA\t\tGO:0004096\tPMID:10368148\tIDA\t\tF\tcatalase\tcatA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4237\trplQ\t\tGO:0006412\tPMID:3309351\tISS\t\tP\t50S ribosomal protein L17\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4238\trpoA\t\tGO:0006351\tPMID:1629175\tISS\t\tP\tDNA-directed RNA polymerase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4239\trpsD\t\tGO:0006412\tPMID:6379605\tISS\t\tP\t30S ribosomal protein S4\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4240\trpsK\t\tGO:0006412\tPMID:7007074\tISS\t\tP\t30S ribosomal protein S11\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4241\trpsM\t\tGO:0006412\tPMID:2989779\tISS\t\tP\t30S ribosomal protein S13\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4242\trpmJ\t\tGO:0006412\tPMID:3298224\tISS\t\tP\t50S ribosomal protein L36\tribosomal protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4243\tsecY\t\tGO:0015031\tPMID:17077865\tISS\t\tP\tsecretion protein SecY\tprlA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4244\trplO\t\tGO:0006412\tPMID:340263\tISS\t\tP\t50S ribosomal protein L15\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4245\trpmD\t\tGO:0006412\tPMID:776670\tISS\t\tP\t50S ribosomal protein L30\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4246\trpsE\t\tGO:0006412\tPMID:2989779\tISS\t\tP\t30S ribosomal protein S5\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4247\trplR\t\tGO:0006412\tPMID:1098937\tISS\t\tP\t50S ribosomal protein L18\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4248\trplF\t\tGO:0006412\tPMID:324885\tISS\t\tP\t50S ribosomal protein L6\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4249\trpsH\t\tGO:0006412\tPMID:1735715\tISS\t\tP\t30S ribosomal protein S8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4250\trpsN\t\tGO:0006412\tPMID:6222285\tISS\t\tP\t30S ribosomal protein S14\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4251\trplE\t\tGO:0006412\tPMID:6222285\tISS\t\tP\t50S ribosomal protein L5\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4252\trplX\t\tGO:0006412\tPMID:6222285\tISS\t\tP\t50S ribosomal protein L24\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4253\trplN\t\tGO:0006412\tPMID:6222285\tISS\t\tP\t50S ribosomal protein L14\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4254\trpsQ\t\tGO:0006412\tPMID:108517\tISS\t\tP\t30S ribosomal protein S17\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4255\trpmC\t\tGO:0006412\tPMID:1092361\tISS\t\tP\t50S ribosomal protein L29\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4256\trplP\t\tGO:0006412\tPMID:3297687\tISS\t\tP\t50S ribosomal protein L16\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4257\trpsC\t\tGO:0006412\tPMID:387449\tISS\t\tP\t30S ribosomal protein S3\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4258\trplV\t\tGO:0006412\tPMID:7007072\tISS\t\tP\t50S ribosomal protein L22\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4259\trpsS\t\tGO:0006412\tPMID:348496\tISS\t\tP\t30S ribosomal protein S19\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4260\trplB\t\tGO:0006412\tPMID:9531480\tISS\t\tP\t50S ribosomal protein L2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4261\trplW\t\tGO:0006412\tPMID:391594\tISS\t\tP\t50S ribosomal protein L23\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4262\trplD\t\tGO:0006412\tPMID:3892488\tISS\t\tP\t50S ribosomal protein L4\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4263\trplC\t\tGO:0006412\tPMID:3892488\tISS\t\tP\t50S ribosomal protein L3\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4264\trpsJ\t\tGO:0006412\tPMID:3892488\tISS\t\tP\t30S ribosomal protein S10\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4265\ttufA\t\tGO:0006412\tPMID:6796560\tISS\t\tP\telongation factor Tu\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4266\tfusA1\t\tGO:0006412\tPMID:6796560\tISS\t\tP\telongation factor G\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4267\trpsG\t\tGO:0006412\tPMID:7507167\tISS\t\tP\t30S ribosomal protein S7\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4268\trpsL\t\tGO:0006412\tPMID:10209746\tISS\t\tP\t30S ribosomal protein S12\tstr\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4269\trpoC\t\tGO:0006351\tPMID:6287430\tISS\t\tP\tDNA-directed RNA polymerase beta* chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4270\trpoB\t\tGO:0006351\tPMID:6266829\tISS\t\tP\tDNA-directed RNA polymerase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4271\trplL\t\tGO:0006412\tPMID:2751714\tISS\t\tP\t50S ribosomal protein L7 / L12\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4272\trplJ\t\tGO:0006412\tPMID:782920\tISS\t\tP\t50S ribosomal protein L10\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4273\trplA\t\tGO:0006412\tPMID:365581\tISS\t\tP\t50S ribosomal protein L1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4274\trplK\t\tGO:0006412\tPMID:2483975\tISS\t\tP\t50S ribosomal protein L11\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4276\tsecE\t\tGO:0015031\tPMID:2673920\tISS\t\tP\tsecretion protein SecE\tprlG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4277\ttufB\t\tGO:0006412\tPMID:7011904\tISS\t\tP\telongation factor Tu\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0008854\tPMID:1618858\tISS\t\tF\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0009338\tPMID:1618858\tISS\t\tC\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0004386\tPMID:9092551\tISS\t\tF\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0043142\tPMID:9092551\tISS\t\tF\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0004519\tPMID:1618858\tISS\t\tF\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0005524\tPMID:3298248\tISS\t\tF\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4284\trecB\t\tGO:0008854\tPMID:1618858\tISS\t\tF\texodeoxyribonuclease V beta chain\trorA|exonuclease V 135 kD polypeptide\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4284\trecB\t\tGO:0009338\tPMID:1618858\tISS\t\tC\texodeoxyribonuclease V beta chain\trorA|exonuclease V 135 kD polypeptide\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4285\trecC\t\tGO:0008854\tPMID:1618858\tISS\t\tF\texodeoxyribonuclease V gamma chain\texonuclease V|125 kD polypeptide\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4285\trecC\t\tGO:0009338\tPMID:1618858\tISS\t\tC\texodeoxyribonuclease V gamma chain\texonuclease V|125 kD polypeptide\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4293\tpprA\t\tGO:0000155\tPMID:12499175\tIDA\t\tF\ttwo-component sensor PprA\tpprA|two-component sensor PprA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4295\tfppA\t\tGO:0004190\tPMID:16788194\tISS\tUniProtKB:B8H2I9\tF\tFlp prepilin peptidase A, FppA\tfppA|Flp prepilin peptidase A, FppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4295\tfppA\t\tGO:0009297\tPMID:16788194\tIDA\t\tP\tFlp prepilin peptidase A, FppA\tfppA|Flp prepilin peptidase A, FppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4295\tfppA\t\tGO:0052001\tPMID:16788194\tISS\tUniProtKB:B8H2I9\tP\tFlp prepilin peptidase A, FppA\tfppA|Flp prepilin peptidase A, FppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4295\tfppA\t\tGO:0005886\tPMID:16788194\tISS\tUniProtKB:B8H2I9\tC\tFlp prepilin peptidase A, FppA\tfppA|Flp prepilin peptidase A, FppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4296\tpprB\t\tGO:0000156\tPMID:12499175\tIDA\t\tF\ttwo-component response regulator, PprB\tpprB|two-component response regulator, PprB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4296\tpprB\t\tGO:0045785\tPMID:19151143\tIMP\t\tP\ttwo-component response regulator, PprB\tpprB|two-component response regulator, PprB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4296\tpprB\t\tGO:0044212\tPMID:21091863\tIDA\t\tF\ttwo-component response regulator, PprB\tpprB|two-component response regulator, PprB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4296\tpprB\t\tGO:1900233\tPMID:21091863\tIMP\t\tP\ttwo-component response regulator, PprB\tpprB|two-component response regulator, PprB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4307\tpctC\t\tGO:0006935\tPMID:9353923\tIMP\t\tP\tchemotactic transducer PctC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4307\tpctC\t\tGO:0043200\tPMID:9353923\tIMP\t\tP\tchemotactic transducer PctC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4307\tpctC\t\tGO:0016597\tPMID:23650915\tIDA\t\tF\tchemotactic transducer PctC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4309\tpctA\t\tGO:0006935\tPMID:9353923\tIMP\t\tP\tchemotactic transducer PctA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4309\tpctA\t\tGO:0043200\tPMID:9353923\tIMP\t\tP\tchemotactic transducer PctA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4309\tpctA\t\tGO:0016597\tPMID:23650915\tIDA\t\tF\tchemotactic transducer PctA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4310\tpctB\t\tGO:0006935\tPMID:9353923\tIMP\t\tP\tchemotactic transducer PctB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4310\tpctB\t\tGO:0043200\tPMID:9353923\tIMP\t\tP\tchemotactic transducer PctB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4310\tpctB\t\tGO:0016597\tPMID:23650915\tIDA\t\tF\tchemotactic transducer PctB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4311\tPA4311\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4315\tmvaT\t\tGO:0044212\tPMID:19684136\tIDA\t\tF\ttranscriptional regulator MvaT, P16 subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4315\tmvaT\t\tGO:0010963\tPMID:19684136\tIMP\t\tP\ttranscriptional regulator MvaT, P16 subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4315\tmvaT\t\tGO:1900377\tPMID:19684136\tIMP\t\tP\ttranscriptional regulator MvaT, P16 subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4315\tmvaT\t\tGO:1900232\tPMID:15090530\tIMP\t\tP\ttranscriptional regulator MvaT, P16 subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0004743\tPMID:7559366\tISS\t\tF\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0042866\tPMID:7559366\tISS\t\tP\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4332\tsadC\t\tGO:0052621\tPMID:17586642\tIDA\t\tF\tSadC\tSadC|sadC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4332\tsadC\t\tGO:0044010\tPMID:17586642\tIMP\t\tP\tSadC\tSadC|sadC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4332\tsadC\t\tGO:0071978\tPMID:17586642\tIMP\t\tP\tSadC\tSadC|sadC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4332\tsadC\t\tGO:1900192\tPMID:26991003\tIDA\t\tP\tSadC\tSadC|sadC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4332\tsadC\t\tGO:0005515\tPMID:28263305\tEXP\tPseudoCAP:PA4379\tF\tSadC\tSadC|sadC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4350\tolsB\t\tGO:0046467\tPMID:15341653\tISS\t\tP\tOlsB\tOlsB|olsB|olsB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4351\tolsA\t\tGO:0016036\tPMID:21535098\tIMP\t\tP\tOlsA\tOlsA|olsA|olsA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4351\tolsA\t\tGO:0046467\tPMID:21535098\tIMP\t\tP\tOlsA\tOlsA|olsA|olsA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4354\tPA4354\t\tGO:1900231\tPMID:22820840\tIMP\t\tP\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4354\tPA4354\t\tGO:0044212\tPMID:22820840\tIDA\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4358\tfeoB\t\tGO:0003924\tPMID:26934982\tIDA\t\tF\tFeoB\tfeoB|FeoB|probable ferrous iron transport protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4363\ticiA\t\tGO:0043565\tPMID:26967762\tIDA\t\tF\tinhibitor of chromosome initiation IciA\tlysR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4367\tbifA\t\tGO:0044010\tPMID:17586641\tIMP\t\tP\tBifA\tbifA|BifA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4367\tbifA\t\tGO:0071111\tPMID:17586641\tIMP\t\tF\tBifA\tbifA|BifA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4367\tbifA\t\tGO:1900191\tPMID:17586641\tIMP\t\tP\tBifA\tbifA|BifA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4374\tmexV\t\tGO:0015238\tPMID:12951344\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexV\tprobable RND efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexV|mexV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4374\tmexV\t\tGO:0006811\tPMID:12951344\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexV\tprobable RND efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexV|mexV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4375\tmexW\t\tGO:0015238\tPMID:12951344\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexW\tprobable RND efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexW|mexW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4375\tmexW\t\tGO:0006811\tPMID:12951344\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexW\tprobable RND efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexW|mexW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4376\tpncB2\t\tGO:0004516\tPMID:2211655\tISS\t\tF\tnicotinate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4379\twarA\t\tGO:0005515\tPMID:28263305\tEXP\tPseudoCAP:PA4332\tF\tWarA\twarA|WarA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4379\twarA\t\tGO:0008168\tPMID:28263305\tIDA\t\tF\tWarA\twarA|WarA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4379\twarA\t\tGO:0035438\tPMID:28263305\tIDA\t\tF\tWarA\twarA|WarA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4380\tcolS\t\tGO:0071236\tPMID:23459479\tIGI\t\tP\ttwo-component sensor ColS\tcolS|two-component sensor ColS|probable two-component sensor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4381\tcolR\t\tGO:0071236\tPMID:23459479\tIGI\t\tP\ttwo-component response regulator ColR\tcolR|two-component response regulator ColR|probable two-component response regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4393\tampG\t\tGO:0022857\tPMID:20713660\tIMP\t\tF\tAmpG\tampG|AmpG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4393\tampG\t\tGO:0046677\tPMID:20713660\tIMP\t\tP\tAmpG\tampG|AmpG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4393\tampG\t\tGO:0009276\tPMID:20713660\tIMP\t\tC\tAmpG\tampG|AmpG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4393\tampG\t\tGO:0033252\tPMID:20713660\tIMP\t\tP\tAmpG\tampG|AmpG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4397\tpanE\t\tGO:0008677\tPMID:9721324\tISS\t\tF\tketopantoate reductase\tabpA|alternative pyrimidine biosynthesis protein|thiamin biosynthesis protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4398\tPA4398\t\tGO:2000147\tPMID:19592586\tISO\tPseudocap:PA14_57170\tP\ttwo-component sensor\thistidine kinase protein|two-component sensor|probable two-component sensor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4398\tPA4398\t\tGO:1900232\tPMID:19592586\tISO\tPseudocap:PA14_57170\tP\ttwo-component sensor\thistidine kinase protein|two-component sensor|probable two-component sensor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4400\tmutT\t\tGO:0016787\tPMID:12445642\tIDA\t\tF\tprobable pyrophosphohydrolase\tmutT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4400\tmutT\t\tGO:0006281\tPMID:12445642\tIDA\t\tP\tprobable pyrophosphohydrolase\tmutT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4400\tmutT\t\tGO:0006281\tPMID:12445642\tIGI\t\tP\tprobable pyrophosphohydrolase\tmutT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4403\tsecA\t\tGO:0015031\tPMID:2841285\tISS\t\tP\tsecretion protein SecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4406\tlpxC\t\tGO:0008759\tPMID:9068651\tIDA\t\tF\tUDP-3-O-acyl-N-acetylglucosamine deacetylase\tasmB|envA|EnvA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4406\tlpxC\t\tGO:0009245\tPMID:9068651\tIDA\t\tP\tUDP-3-O-acyl-N-acetylglucosamine deacetylase\tasmB|envA|EnvA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4407\tftsZ\t\tGO:0005525\tPMID:1528267\tISS\t\tF\tcell division protein FtsZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4407\tftsZ\t\tGO:0003924\tPMID:8412693\tISS\t\tF\tcell division protein FtsZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4410\tddlB\t\tGO:0008716\tPMID:1993184\tISS\t\tF\tD-alanine--D-alanine ligase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4412\tmurG\t\tGO:0050511\tPMID:10338150\tISS\t\tF\tUDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4412\tmurG\t\tGO:0009252\tPMID:1649817\tISS\t\tP\tUDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4412\tmurG\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT28\tF\tUDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4428\tsspA\t\tGO:0034198\tPMID:8022275\tISS\t\tP\tstringent starvation protein A\tpog|ssp\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4432\trpsI\t\tGO:0006412\tPMID:3884974\tISS\t\tP\t30S ribosomal protein S9\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4433\trplM\t\tGO:0006412\tPMID:3884974\tISS\t\tP\t50S ribosomal protein L13\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4442\tcysN\t\tGO:0009970\tPMID:9611812\tIDA\t\tP\tATP sulfurylase GTP-binding subunit/APS kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4444\tmltB1\t\tGO:0008933\tPMID:11790124\tIDA\t\tF\tsoluble and membrane-bound lytic transglycosylases\tmembrane-bound lytic transglycosylase, sMltB, soluble lytic transglycosylases B (SltB)|murein hydrolase B\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4444\tmltB1\t\tGO:0009252\tPMID:11790124\tISS\t\tP\tsoluble and membrane-bound lytic transglycosylases\tmembrane-bound lytic transglycosylase, sMltB, soluble lytic transglycosylases B (SltB)|murein hydrolase B\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4446\talgW\t\tGO:0008233\tPMID:19298369\tIDA\t\tF\tAlgW protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4447\thisC1\t\tGO:0004400\tPMID:11518529\tISS\t\tF\thistidinol-phosphate aminotransferase\this8|imidazole acetol-phosphate transaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4447\thisC1\t\tGO:0000105\tPMID:11518529\tISS\t\tP\thistidinol-phosphate aminotransferase\this8|imidazole acetol-phosphate transaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4448\thisD\t\tGO:0004399\tPMID:3018428\tISS\t\tF\thistidinol dehydrogenase\thisX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4450\tmurA\t\tGO:0009252\tPMID:7608103\tISS\t\tP\tUDP-N-acetylglucosamine 1-carboxyvinyltransferase\tenoylpyruvate transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4450\tmurA\t\tGO:0008760\tPMID:7608103\tISS\t\tF\tUDP-N-acetylglucosamine 1-carboxyvinyltransferase\tenoylpyruvate transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4455\tPA4455\t\tGO:0080033\tPMID:27064218\tIMP\t\tP\tprobable permease of ABC transporter\tyrbE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4459\tlptC\t\tGO:0015921\tPMID:23138981\tISS\tUniProtKB:P0ADV9\tP\tLipopolysaccharide export system protein LptC\tyrbK|lptC|Lipopolysaccharide export system protein LptC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4459\tlptC\t\tGO:0042626\tPMID:23138981\tISS\tUniProtKB:P0ADV9\tF\tLipopolysaccharide export system protein LptC\tyrbK|lptC|Lipopolysaccharide export system protein LptC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4459\tlptC\t\tGO:0001530\tPMID:23138981\tISS\tUniProtKB:P0ADV9\tF\tLipopolysaccharide export system protein LptC\tyrbK|lptC|Lipopolysaccharide export system protein LptC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4460\tlptH\t\tGO:0015921\tPMID:25735820\tIDA\t\tP\tLptH\tyhbN|lptH|LptH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4460\tlptH\t\tGO:0001530\tPMID:23138981\tISS\tUniProtKB:P0ADV1\tF\tLptH\tyhbN|lptH|LptH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4461\tlptB\t\tGO:0015921\tPMID:17056748\tISS\tUniProtKB:P0A9V1\tP\tLipopolysaccharide export system ATP-binding protein LptB\tyhbG|lptB|Lipopolysaccharide export system ATP-binding protein LptB|probable ATP-binding component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4461\tlptB\t\tGO:0042626\tPMID:24639492\tISS\tUniProtKB:P0A9V1\tF\tLipopolysaccharide export system ATP-binding protein LptB\tyhbG|lptB|Lipopolysaccharide export system ATP-binding protein LptB|probable ATP-binding component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4462\trpoN\t\tGO:1900191\tPMID:15231779\tIMP\t\tP\tRNA polymerase sigma-54 factor\tntrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4464\tptsN\t\tGO:0009401\tPMID:17416664\tISS\t\tP\tnitrogen regulatory IIA protein\tcomponent A|probable phosphotransferase enzyme II\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4470\tfumC1\t\tGO:0004333\tPMID:9045798\tIDA\t\tF\tfumarate hydratase\tfumarase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4470\tfumC1\t\tGO:0010106\tPMID:9045798\tIDA\t\tP\tfumarate hydratase\tfumarase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4472\tpmbA\t\tGO:0030651\tPMID:2082149\tISS\t\tP\tPmbA protein\ttldE|TldE protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4479\tmreD\t\tGO:0008360\tPMID:2687239\tISS\t\tP\trod shape-determining protein MreD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4482\tgatC\t\tGO:0050567\tPMID:9342321\tISS\t\tF\tGlu-tRNA(Gln) amidotransferase subunit C\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4482\tgatC\t\tGO:0030956\tPMID:9342321\tISS\t\tC\tGlu-tRNA(Gln) amidotransferase subunit C\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4483\tgatA\t\tGO:0050567\tPMID:9342321\tISS\t\tF\tGlu-tRNA(Gln) amidotransferase subunit A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4483\tgatA\t\tGO:0030956\tPMID:9342321\tISS\t\tC\tGlu-tRNA(Gln) amidotransferase subunit A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4484\tgatB\t\tGO:0050567\tPMID:9342321\tISS\t\tF\tGlu-tRNA(Gln) amidotransferase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4484\tgatB\t\tGO:0030956\tPMID:9342321\tISS\t\tC\tGlu-tRNA(Gln) amidotransferase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4493\troxR\t\tGO:0000156\tPMID:12139621\tISS\t\tF\tRoxR\troxR|RoxR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4493\troxR\t\tGO:0044212\tPMID:12139621\tIDA\t\tF\tRoxR\troxR|RoxR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4494\troxS\t\tGO:0000155\tPMID:12139621\tISS\t\tF\tRoxS\troxS|RoxS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4496\tdppA1\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tprobable binding protein component of ABC transporter\tdppA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4496\tdppA1\t\tGO:0042938\tPMID:25338022\tISS\tPseudoCAP:PA14_58350\tP\tprobable binding protein component of ABC transporter\tdppA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4496\tdppA1\t\tGO:0042277\tPMID:25338022\tISS\tPseudoCAP:PA14_58350\tF\tprobable binding protein component of ABC transporter\tdppA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4497\tdppA2\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tprobable binding protein component of ABC transporter\tdppA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4497\tdppA2\t\tGO:0042938\tPMID:25338022\tISS\tPseudoCAP:PA14_58360\tP\tprobable binding protein component of ABC transporter\tdppA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4497\tdppA2\t\tGO:0042277\tPMID:25338022\tISS\tPseudoCAP:PA14_58360\tF\tprobable binding protein component of ABC transporter\tdppA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4498\tmdpA\t\tGO:0016805\tPMID:18667554\tIDA\t\tF\tmetallo-dipeptidase aeruginosa, MdpA\tmdpA|metallo-dipeptidase aeruginosa, MdpA|probable metallopeptidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4498\tmdpA\t\tGO:0042938\tPMID:18667554\tIMP\t\tP\tmetallo-dipeptidase aeruginosa, MdpA\tmdpA|metallo-dipeptidase aeruginosa, MdpA|probable metallopeptidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4499\tpsdR\t\tGO:2000879\tPMID:18667554\tIDA\t\tP\tPseudomonas dipeptide regulator, PdsR\tpsdR|Pseudomonas dipeptide regulator, PdsR|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4500\tdppA3\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tprobable binding protein component of ABC transporter\tdppA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4500\tdppA3\t\tGO:0042938\tPMID:25338022\tISS\tPseudoCAP:PA14_58390\tP\tprobable binding protein component of ABC transporter\tdppA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4500\tdppA3\t\tGO:0042277\tPMID:25338022\tISS\tPseudoCAP:PA14_58390\tF\tprobable binding protein component of ABC transporter\tdppA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4501\topdD\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tGlycine-glutamate dipeptide porin OpdP\topdP|Glycine-glutamate dipeptide porin OpdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4501\topdD\t\tGO:0015288\tPMID:25338022\tIDA\t\tF\tGlycine-glutamate dipeptide porin OpdP\topdP|Glycine-glutamate dipeptide porin OpdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4502\tdppA4\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tprobable binding protein component of ABC transporter\tdppA4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4502\tdppA4\t\tGO:0042938\tPMID:25338022\tISS\tPseudoCAP:PA14_58420\tP\tprobable binding protein component of ABC transporter\tdppA4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4502\tdppA4\t\tGO:0042277\tPMID:25338022\tISS\tPseudoCAP:PA14_58420\tF\tprobable binding protein component of ABC transporter\tdppA4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4503\tdppB\t\tGO:0071916\tPMID:25338022\tIDA\t\tF\tdipeptide ABC transporter permease DppB\tdppB|dipeptide ABC transporter permease DppB|probable permease of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4503\tdppB\t\tGO:0042938\tPMID:25338022\tISS\tPseudoCAP:PA14_58440\tP\tdipeptide ABC transporter permease DppB\tdppB|dipeptide ABC transporter permease DppB|probable permease of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4503\tdppB\t\tGO:0042277\tPMID:25338022\tISS\tPseudoCAP:PA14_58350\tF\tdipeptide ABC transporter permease DppB\tdppB|dipeptide ABC transporter permease DppB|probable permease of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4504\tdppC\t\tGO:0071916\tPMID:25338022\tIDA\t\tF\tdipeptide ABC transporter permease DppC\tdppC|dipeptide ABC transporter permease DppC|probable permease of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4504\tdppC\t\tGO:0042938\tPMID:25338022\tISS\tPseudoCAP:PA14_58450\tP\tdipeptide ABC transporter permease DppC\tdppC|dipeptide ABC transporter permease DppC|probable permease of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4504\tdppC\t\tGO:0042277\tPMID:25338022\tISS\tPseudoCAP:PA14_58360\tF\tdipeptide ABC transporter permease DppC\tdppC|dipeptide ABC transporter permease DppC|probable permease of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4505\tdppD\t\tGO:0071916\tPMID:25338022\tIDA\t\tF\tdipeptide ABC transporter ATP-binding protein DppD\tdppD|dipeptide ABC transporter ATP-binding protein DppD|probable ATP-binding component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4505\tdppD\t\tGO:0042938\tPMID:25338022\tISS\tPseudoCAP:PA14_58470\tP\tdipeptide ABC transporter ATP-binding protein DppD\tdppD|dipeptide ABC transporter ATP-binding protein DppD|probable ATP-binding component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4505\tdppD\t\tGO:0042277\tPMID:25338022\tISS\tPseudoCAP:PA14_58390\tF\tdipeptide ABC transporter ATP-binding protein DppD\tdppD|dipeptide ABC transporter ATP-binding protein DppD|probable ATP-binding component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4506\tdppF\t\tGO:0071916\tPMID:25338022\tIDA\t\tF\tdipeptide ABC transporter ATP-binding protein DppF\tdppF|dipeptide ABC transporter ATP-binding protein DppF|probable ATP-binding component of ABC dipeptide transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4506\tdppF\t\tGO:0042938\tPMID:25338022\tISS\tPseudoCAP:PA14_58490\tP\tdipeptide ABC transporter ATP-binding protein DppF\tdppF|dipeptide ABC transporter ATP-binding protein DppF|probable ATP-binding component of ABC dipeptide transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4506\tdppF\t\tGO:0042277\tPMID:25338022\tISS\tPseudoCAP:PA14_58420\tF\tdipeptide ABC transporter ATP-binding protein DppF\tdppF|dipeptide ABC transporter ATP-binding protein DppF|probable ATP-binding component of ABC dipeptide transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4512\tlpxO1\t\tGO:0009245\tPMID:21764941\tISS\t\tP\tlipopolysaccharide biosynthetic protein LpxO1\tlpxO1|lipopolysaccharide biosynthetic protein LpxO1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4512\tlpxO1\t\tGO:0051213\tPMID:18254598\tISS\t\tF\tlipopolysaccharide biosynthetic protein LpxO1\tlpxO1|lipopolysaccharide biosynthetic protein LpxO1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4519\tspeC\t\tGO:0004586\tPMID:12634339\tIMP\t\tF\tornithine decarboxylase\tspeC|ornithine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4519\tspeC\t\tGO:0033387\tPMID:12634339\tIMP\t\tP\tornithine decarboxylase\tspeC|ornithine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4521\tampE\t\tGO:0046677\tPMID:9835532\tIMP\t\tP\tAmpE\tampE|AmpE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4521\tampE\t\tGO:0050896\tPMID:9835532\tIMP\t\tP\tAmpE\tampE|AmpE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4522\tampD\t\tGO:0008745\tPMID:9835532\tIMP\t\tF\tbeta-lactamase expression regulator AmpD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4522\tampD\t\tGO:0009276\tPMID:9835532\tIMP\t\tC\tbeta-lactamase expression regulator AmpD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4522\tampD\t\tGO:0033252\tPMID:9835532\tIMP\t\tP\tbeta-lactamase expression regulator AmpD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4524\tnadC\t\tGO:0004514\tPMID:8419294\tISS\t\tF\tnicotinate-nucleotide pyrophosphorylase\tquinolinate phosphoribosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0044096\tPMID:2985436\tIDA\t\tC\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0043107\tPMID:12933890\tIDA\t\tP\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0016337\tPMID:2897336\tIDA\t\tP\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0050848\tPMID:23266901\tIMP\t\tP\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0044011\tPMID:14507363\tIMP\t\tP\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0043709\tPMID:16849183\tIMP\t\tP\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0009405\tPMID:10377148\tIMP\t\tP\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0043107\tPMID:9224878\tIMP\t\tP\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0050848\tPMID:23266901\tIMP\t\tP\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0009289\tPMID:2985436\tIDA\t\tC\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4526\tpilB\t\tGO:0016887\tPMID:18174131\tIDA\t\tF\ttype 4 fimbrial biogenesis protein PilB\tpilin biogenesis protein PilB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4526\tpilB\t\tGO:0043107\tPMID:1671384\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilB\tpilin biogenesis protein PilB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4526\tpilB\t\tGO:0043683\tPMID:1671384\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilB\tpilin biogenesis protein PilB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4528\tpilD\t\tGO:0043683\tPMID:1671384\tIMP\t\tP\ttype 4 prepilin peptidase PilD\txcpA|type 4 fimbrial biogenesis protein PilD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4528\tpilD\t\tGO:0006465\tPMID:8096341\tIDA\t\tP\ttype 4 prepilin peptidase PilD\txcpA|type 4 fimbrial biogenesis protein PilD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4528\tpilD\t\tGO:0005886\tPMID:9466269\tIDA\t\tC\ttype 4 prepilin peptidase PilD\txcpA|type 4 fimbrial biogenesis protein PilD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4528\tpilD\t\tGO:0009297\tPMID:9668097\tIDA\t\tP\ttype 4 prepilin peptidase PilD\txcpA|type 4 fimbrial biogenesis protein PilD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4528\tpilD\t\tGO:0008170\tPMID:8096341\tIDA\t\tF\ttype 4 prepilin peptidase PilD\txcpA|type 4 fimbrial biogenesis protein PilD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4528\tpilD\t\tGO:0004190\tPMID:23255525\tIDA\t\tF\ttype 4 prepilin peptidase PilD\txcpA|type 4 fimbrial biogenesis protein PilD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4528\tpilD\t\tGO:0006480\tPMID:23255525\tIDA\t\tP\ttype 4 prepilin peptidase PilD\txcpA|type 4 fimbrial biogenesis protein PilD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4528\tpilD\t\tGO:0015627\tPMID:1588814\tIDA\t\tC\ttype 4 prepilin peptidase PilD\txcpA|type 4 fimbrial biogenesis protein PilD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4529\tcoaE\t\tGO:0015937\tPMID:11292795\tISS\t\tP\tdephosphocoenzyme A kinase\tCoaE protein|coaE|dephosphocoenzyme A kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4529\tcoaE\t\tGO:0004140\tPMID:11292795\tISS\t\tF\tdephosphocoenzyme A kinase\tCoaE protein|coaE|dephosphocoenzyme A kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4542\tclpB\t\tGO:0034605\tPMID:2066329\tISS\t\tP\tClpB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4542\tclpB\t\tGO:0005524\tPMID:9677327\tISS\t\tF\tClpB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4542\tclpB\t\tGO:0016887\tPMID:9677327\tISS\t\tF\tClpB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4546\tpilS\t\tGO:0000155\tPMID:8097014\tISS\t\tF\ttwo-component sensor PilS\tprotein kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4546\tpilS\t\tGO:0060491\tPMID:19857645\tIMP\t\tP\ttwo-component sensor PilS\tprotein kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4547\tpilR\t\tGO:0000156\tPMID:8097014\tISS\t\tF\ttwo-component response regulator PilR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4547\tpilR\t\tGO:0060491\tPMID:19857645\tIMP\t\tP\ttwo-component response regulator PilR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4549\tfimT\t\tGO:0043683\tPMID:8682785\tIDA\t\tP\ttype 4 fimbrial biogenesis protein FimT\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4549\tfimT\t\tGO:0016888\tPMID:18174131\tIDA\t\tF\ttype 4 fimbrial biogenesis protein FimT\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4550\tfimU\t\tGO:0043683\tPMID:8682785\tIMP\t\tP\ttype 4 fimbrial biogenesis protein FimU\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4550\tfimU\t\tGO:0043107\tPMID:20338182\tIMP\t\tP\ttype 4 fimbrial biogenesis protein FimU\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4550\tfimU\t\tGO:0009297\tPMID:20338182\tIDA\t\tP\ttype 4 fimbrial biogenesis protein FimU\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4550\tfimU\t\tGO:0044096\tPMID:20338182\tIDA\t\tC\ttype 4 fimbrial biogenesis protein FimU\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4550\tfimU\t\tGO:0043107\tPMID:20338182\tIMP\t\tP\ttype 4 fimbrial biogenesis protein FimU\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4551\tpilV\t\tGO:0016020\tPMID:7565109\tIDA\t\tC\ttype 4 fimbrial biogenesis protein PilV\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4551\tpilV\t\tGO:0043683\tPMID:7565109\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilV\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4551\tpilV\t\tGO:0043107\tPMID:20338182\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilV\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4551\tpilV\t\tGO:0009297\tPMID:20338182\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilV\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4551\tpilV\t\tGO:0044096\tPMID:20338182\tIDA\t\tC\ttype 4 fimbrial biogenesis protein PilV\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4551\tpilV\t\tGO:0043107\tPMID:20338182\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilV\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4552\tpilW\t\tGO:0043683\tPMID:8899718\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilW\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4552\tpilW\t\tGO:0043107\tPMID:20338182\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilW\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4552\tpilW\t\tGO:0009297\tPMID:20338182\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilW\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4552\tpilW\t\tGO:0044096\tPMID:20338182\tIDA\t\tC\ttype 4 fimbrial biogenesis protein PilW\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4552\tpilW\t\tGO:0043107\tPMID:20338182\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilW\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4553\tpilX\t\tGO:0043107\tPMID:20338182\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4553\tpilX\t\tGO:0009297\tPMID:20338182\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4553\tpilX\t\tGO:0044096\tPMID:20338182\tIDA\t\tC\ttype 4 fimbrial biogenesis protein PilX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4553\tpilX\t\tGO:0043107\tPMID:20338182\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4554\tpilY1\t\tGO:0043107\tPMID:20338182\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilY1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4555\tpilY2\t\tGO:0043107\tPMID:20338182\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilY2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4556\tpilE\t\tGO:0043107\tPMID:20338182\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4556\tpilE\t\tGO:0043683\tPMID:7854130\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4556\tpilE\t\tGO:0009297\tPMID:20338182\tIDA\t\tP\ttype 4 fimbrial biogenesis protein PilE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4557\tlytB\t\tGO:0051483\tPMID:11418107\tISS\t\tP\tLytB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4557\tlytB\t\tGO:0051745\tPMID:12706830\tISS\t\tF\tLytB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4559\tlspA\t\tGO:0004190\tPMID:17098907\tISS\tUniProtKB:Q68WX1\tF\tprolipoprotein signal peptidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4559\tlspA\t\tGO:0006465\tPMID:17098907\tISS\tUniProtKB:Q68WX1\tP\tprolipoprotein signal peptidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4559\tlspA\t\tGO:0005886\tPMID:17098907\tISS\tUniProtKB:Q68WX1\tC\tprolipoprotein signal peptidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4561\tribF\t\tGO:0003919\tPMID:9473052\tISS\t\tF\triboflavin kinase/FAD synthase\tflavokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4561\tribF\t\tGO:0008531\tPMID:9473052\tISS\t\tF\triboflavin kinase/FAD synthase\tflavokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4563\trpsT\t\tGO:0006412\tPMID:7683367\tISS\t\tP\t30S ribosomal protein S20\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4565\tproB\t\tGO:0006561\tPMID:15502337\tISS\t\tP\tglutamate 5-kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4565\tproB\t\tGO:0004349\tPMID:15502337\tISS\t\tF\tglutamate 5-kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4567\trpmA\t\tGO:0006412\tPMID:9677420\tISS\t\tP\t50S ribosomal protein L27\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4568\trplU\t\tGO:0006412\tPMID:9693099\tISS\t\tP\t50S ribosomal protein L21\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4585\trtcA\t\tGO:0003963\tPMID:9738023\tISS\t\tF\tRNA 3'-terminal phosphate cyclase\tyhgK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4585\trtcA\t\tGO:0005524\tPMID:22167800\tISS\t\tF\tRNA 3'-terminal phosphate cyclase\tyhgK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4585\trtcA\t\tGO:0070566\tPMID:21098490\tISS\t\tF\tRNA 3'-terminal phosphate cyclase\tyhgK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4587\tccpR\t\tGO:0004130\tPMID:1657179\tIDA\t\tF\tcytochrome c551 peroxidase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4588\tgdhA\t\tGO:0004354\tPMID:8355660\tISS\t\tF\tglutamate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4596\tesrC\t\tGO:0006355\tPMID:25143244\tIDA\t\tP\tEsrC\tEsrC|esrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4596\tesrC\t\tGO:0000975\tPMID:25143244\tIDA\t\tF\tEsrC\tEsrC|esrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4596\tesrC\t\tGO:0042493\tPMID:25143244\tEXP\t\tP\tEsrC\tEsrC|esrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4597\toprJ\t\tGO:0015238\tPMID:8878035\tIDA\t\tF\tMultidrug efflux outer membrane protein OprJ precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4597\toprJ\t\tGO:0042493\tPMID:12654738\tEXP\t\tP\tMultidrug efflux outer membrane protein OprJ precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4598\tmexD\t\tGO:0015238\tPMID:8878035\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexD\tRND multidrug efflux transporter MexD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4598\tmexD\t\tGO:0042493\tPMID:12654738\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexD\tRND multidrug efflux transporter MexD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4599\tmexC\t\tGO:0015238\tPMID:8878035\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexC precursor\tRND multidrug efflux membrane fusion protein MexC precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4599\tmexC\t\tGO:0042493\tPMID:12654738\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexC precursor\tRND multidrug efflux membrane fusion protein MexC precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4600\tnfxB\t\tGO:0032410\tPMID:20373734\tIMP\t\tP\ttranscriptional regulator NfxB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4600\tnfxB\t\tGO:0044212\tPMID:23924707\tIDA\t\tF\ttranscriptional regulator NfxB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4600\tnfxB\t\tGO:0045892\tPMID:8878035\tIMP\t\tP\ttranscriptional regulator NfxB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4600\tnfxB\t\tGO:0000976\tPMID:23924707\tIDA\t\tF\ttranscriptional regulator NfxB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4600\tnfxB\t\tGO:0032410\tPMID:8878035\tIMP\t\tP\ttranscriptional regulator NfxB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4615\tfprB\t\tGO:0071470\tPMID:26230408\tIGI\t\tP\tFprB\tfprB|FprB|probable oxidoreductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4615\tfprB\t\tGO:0034599\tPMID:26230408\tIGI\t\tP\tFprB\tfprB|FprB|probable oxidoreductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4615\tfprB\t\tGO:0003994\tPMID:26230408\tIGI\t\tF\tFprB\tfprB|FprB|probable oxidoreductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4615\tfprB\t\tGO:0000104\tPMID:26230408\tIGI\t\tF\tFprB\tfprB|FprB|probable oxidoreductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4624\tcdrB\t\tGO:0044010\tPMID:20088866\tIMP\t\tP\tcyclic diguanylate-regulated TPS partner B, CdrB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4624\tcdrB\t\tGO:0098046\tPMID:20088866\tISS\tUniProtKB:P35077\tC\tcyclic diguanylate-regulated TPS partner B, CdrB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4624\tcdrB\t\tGO:0008320\tPMID:20088866\tIMP\t\tF\tcyclic diguanylate-regulated TPS partner B, CdrB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4625\tcdrA\t\tGO:0044010\tPMID:20088866\tIDA\t\tP\tcyclic diguanylate-regulated TPS partner A, CdrA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4625\tcdrA\t\tGO:0098046\tPMID:20088866\tISS\tUniProtKB:P12255\tC\tcyclic diguanylate-regulated TPS partner A, CdrA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4625\tcdrA\t\tGO:0097312\tPMID:20088866\tIDA\t\tC\tcyclic diguanylate-regulated TPS partner A, CdrA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4626\thprA\t\tGO:0016618\tPMID:1729225\tISS\t\tF\tglycerate dehydrogenase\thydroxypyruvate reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4628\tlysP\t\tGO:0015171\tPMID:1315732\tISS\t\tF\tlysine-specific permease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4628\tlysP\t\tGO:1902022\tPMID:1315732\tISS\t\tP\tlysine-specific permease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4632\tPA4632\t\tGO:0008237\tPMID:9015299\tISS\tUniProtKB:P47154\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4640\tmqoB\t\tGO:0008924\tPMID:12480887\tIDA\t\tF\tmalate:quinone oxidoreductase\tmalate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4640\tmqoB\t\tGO:0006069\tPMID:12480887\tIDA\t\tP\tmalate:quinone oxidoreductase\tmalate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4640\tmqoB\t\tGO:0008924\tPMID:12480887\tIMP\t\tF\tmalate:quinone oxidoreductase\tmalate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4640\tmqoB\t\tGO:0006069\tPMID:12480887\tIMP\t\tP\tmalate:quinone oxidoreductase\tmalate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4647\turaA\t\tGO:0015210\tPMID:7721693\tISS\t\tF\turacil permease\tpyrP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4647\turaA\t\tGO:0015857\tPMID:7721693\tISS\t\tP\turacil permease\tpyrP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4655\themH\t\tGO:0004325\tPMID:8056770\tISS\t\tF\tferrochelatase\tvisA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4655\themH\t\tGO:0006783\tPMID:8056770\tISS\t\tP\tferrochelatase\tvisA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4655\themH\t\tGO:0044550\tPMID:11728716\tISS\t\tP\tferrochelatase\tvisA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4660\tphr\t\tGO:0009650\tPMID:11282583\tIMP\t\tP\tdeoxyribodipyrimidine photolyase\tDNA photolyase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4660\tphr\t\tGO:0003904\tPMID:6325460\tISS\t\tF\tdeoxyribodipyrimidine photolyase\tDNA photolyase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4661\tpagL\t\tGO:0046493\tPMID:15611102\tIDA\t\tP\tLipid A 3-O-deacylase\tpagL|Lipid A 3-O-deacylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4662\tmurI\t\tGO:0009252\tPMID:1355768\tISS\t\tP\tglutamate racemase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4662\tmurI\t\tGO:0008881\tPMID:8098327\tISS\t\tF\tglutamate racemase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4663\tmoeB\t\tGO:0006777\tPMID:11463785\tISS\t\tP\tmolybdopterin biosynthesis MoeB protein\tchlN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4664\tprmC\t\tGO:0008757\tPMID:23278968\tISS\tPseudoCAP:PA14_61680\tF\tS-adenosylmethionine-dependent methyltransferase, PrmC\themin biosynthetic protein HemK (misnomer)|prmC|hemK|S-adenosylmethionine-dependent methyltransferase, PrmC|probable methyl transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4665\tprfA\t\tGO:0003747\tPMID:15312775\tISS\t\tF\tpeptide chain release factor 1\trf1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4665\tprfA\t\tGO:0006415\tPMID:15312775\tISS\t\tP\tpeptide chain release factor 1\trf1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4666\themA\t\tGO:0008883\tPMID:8831980\tISS\t\tF\tglutamyl-tRNA reductase\tglutR|hem1|hemA|delta-aminolevulinic synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4666\themA\t\tGO:0033014\tPMID:2548996\tISS\t\tP\tglutamyl-tRNA reductase\tglutR|hem1|hemA|delta-aminolevulinic synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4668\tlolB\t\tGO:0044874\tPMID:17350955\tIDA\t\tP\tlipoprotein localization protein LolB\tlolB|lipoprotein localization protein LolB|probable lipoprotein localization protein LolB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4669\tipk\t\tGO:0050515\tPMID:21282208\tISS\t\tF\tisopentenyl monophosphate kinase\tychB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4669\tipk\t\tGO:0008299\tPMID:21282208\tISS\t\tP\tisopentenyl monophosphate kinase\tychB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4672\tPA4672\t\tGO:0004045\tPMID:9303320\tISS\t\tF\tpeptidyl-tRNA hydrolase\tpth\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4674\tPA4674\t\tGO:0097351\tPMID:26987441\tISS\tPseudoCAP:PA14_61840\tF\tAntitoxin HigA\tvapI|Antitoxin HigA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4675\tchtA\t\tGO:0015344\tPMID:16549659\tIMP\t\tF\tChtA\toptH|iutA|ChtA|chtA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4675\tchtA\t\tGO:0015891\tPMID:16549659\tIMP\t\tP\tChtA\toptH|iutA|ChtA|chtA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4676\tPA4676\t\tGO:0004089\tPMID:23728627\tIDA\t\tF\tprobable carbonic anhydrase\tyadF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4676\tPA4676\t\tGO:0008270\tPMID:23728627\tIDA\t\tF\tprobable carbonic anhydrase\tyadF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4678\trimI\t\tGO:0034212\tPMID:6991870\tISS\t\tF\tpeptide n-acetyltransferase RimI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4687\thitA\t\tGO:0015682\tPMID:9360608\tISS\t\tP\tferric iron-binding periplasmic protein HitA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4687\thitA\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\tferric iron-binding periplasmic protein HitA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4693\tpssA\t\tGO:0003882\tPMID:9260935\tISS\t\tF\tphosphatidylserine synthase\tCDP-diacylglycerol--serine O-phosphatidyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4693\tpssA\t\tGO:0006646\tPMID:9260935\tISS\t\tP\tphosphatidylserine synthase\tCDP-diacylglycerol--serine O-phosphatidyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4694\tilvC\t\tGO:0004455\tPMID:16322583\tISS\t\tF\tketol-acid reductoisomerase\tacetohydroxy-acid isomeroreductase|alpha-keto-beta-hydroxylacil reductoisomerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4694\tilvC\t\tGO:0009082\tPMID:16322583\tISS\t\tP\tketol-acid reductoisomerase\tacetohydroxy-acid isomeroreductase|alpha-keto-beta-hydroxylacil reductoisomerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4695\tilvH\t\tGO:0003984\tPMID:9581571\tISS\t\tF\tacetolactate synthase isozyme III small subunit\tAHAS-III, ALS-III|acetohydroxy-acid synthase III small subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4695\tilvH\t\tGO:0009082\tPMID:9581571\tISS\t\tP\tacetolactate synthase isozyme III small subunit\tAHAS-III, ALS-III|acetohydroxy-acid synthase III small subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4695\tilvH\t\tGO:0005948\tPMID:9581571\tISS\t\tC\tacetolactate synthase isozyme III small subunit\tAHAS-III, ALS-III|acetohydroxy-acid synthase III small subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4696\tilvI\t\tGO:0003984\tPMID:9581571\tISS\t\tF\tacetolactate synthase large subunit\tacetohydroxy-acid synthase III large subunit|AHAS-III, ALS-III\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4696\tilvI\t\tGO:0009082\tPMID:9581571\tISS\t\tP\tacetolactate synthase large subunit\tacetohydroxy-acid synthase III large subunit|AHAS-III, ALS-III\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4696\tilvI\t\tGO:0005948\tPMID:9581571\tISS\t\tC\tacetolactate synthase large subunit\tacetohydroxy-acid synthase III large subunit|AHAS-III, ALS-III\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4700\tmrcB\t\tGO:0009252\tPMID:6389538\tISS\t\tP\tpenicillin-binding protein 1B\tpbpF|ponB|peptidoglycan synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4700\tmrcB\t\tGO:0008955\tPMID:6389538\tISS\t\tF\tpenicillin-binding protein 1B\tpbpF|ponB|peptidoglycan synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4700\tmrcB\t\tGO:0009002\tPMID:6389538\tISS\t\tF\tpenicillin-binding protein 1B\tpbpF|ponB|peptidoglycan synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4700\tmrcB\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT51\tF\tpenicillin-binding protein 1B\tpbpF|ponB|peptidoglycan synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704\tcbpA\t\tGO:0030552\tPMID:19801409\tIPI\tCHEBI:17489\tF\tcAMP-binding protein A\tcbpA|cAMP-binding protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4706\tphuV\t\tGO:0006810\tPMID:10658665\tIMP\t\tP\tPhuV\tphuV|PhuV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4707\tphuU\t\tGO:0006810\tPMID:10658665\tIMP\t\tP\tPhuU\tphuU|PhuU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4709\tphuS\t\tGO:0020037\tPMID:10658665\tIMP\t\tF\tPhuS\tphuS|PhuS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4710\tphuR\t\tGO:0015232\tPMID:10658665\tIMP\t\tF\tHeme/Hemoglobin uptake outer membrane receptor PhuR precursor\tHaem/Haemoglobin uptake outer membrane receptor PhuR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4710\tphuR\t\tGO:0015886\tPMID:10658665\tIMP\t\tP\tHeme/Hemoglobin uptake outer membrane receptor PhuR precursor\tHaem/Haemoglobin uptake outer membrane receptor PhuR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4710\tphuR\t\tGO:0019867\tPMID:10658665\tIMP\t\tC\tHeme/Hemoglobin uptake outer membrane receptor PhuR precursor\tHaem/Haemoglobin uptake outer membrane receptor PhuR precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4720\ttrmA\t\tGO:0030697\tPMID:1373891\tISS\t\tF\ttRNA (uracil-5-)-methyltransferase\tRUMT|trna(m-5U54)-methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4723\tdksA\t\tGO:0045861\tPMID:11160083\tIDA\t\tP\tsuppressor protein DksA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4723\tdksA\t\tGO:0051055\tPMID:11160083\tIDA\t\tP\tsuppressor protein DksA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4723\tdksA\t\tGO:0045892\tPMID:15853892\tIMP\t\tP\tsuppressor protein DksA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4723\tdksA\t\tGO:2000679\tPMID:15853892\tIMP\t\tP\tsuppressor protein DksA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4723\tdksA\t\tGO:1901857\tPMID:18203836\tIMP\t\tP\tsuppressor protein DksA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4723\tdksA\t\tGO:0070063\tPMID:21255113\tIDA\t\tF\tsuppressor protein DksA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4725\tcbrA\t\tGO:0000160\tPMID:11401699\tIDA\t\tP\ttwo-component sensor CbrA\tcbrA|two-component sensor CbrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4725\tcbrA\t\tGO:2000147\tPMID:21169488\tIMP\t\tP\ttwo-component sensor CbrA\tcbrA|two-component sensor CbrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4725\tcbrA\t\tGO:1900232\tPMID:21169488\tIMP\t\tP\ttwo-component sensor CbrA\tcbrA|two-component sensor CbrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4725\tcbrA\t\tGO:0000155\tPMID:11401699\tISS\t\tF\ttwo-component sensor CbrA\tcbrA|two-component sensor CbrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4725\tcbrA\t\tGO:0009405\tPMID:24379284\tISO\tPseudoCAP:PA14_62530\tP\ttwo-component sensor CbrA\tcbrA|two-component sensor CbrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4725\tcbrA\t\tGO:1900407\tPMID:24379284\tISO\tPseudoCAP:PA14_62530\tP\ttwo-component sensor CbrA\tcbrA|two-component sensor CbrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726\tcbrB\t\tGO:2000147\tPMID:21169488\tIMP\t\tP\ttwo-component response regulator CbrB\tcbrB|two-component response regulator CbrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726\tcbrB\t\tGO:1900081\tPMID:11401699\tIMP\t\tP\ttwo-component response regulator CbrB\tcbrB|two-component response regulator CbrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726\tcbrB\t\tGO:0000156\tPMID:11401699\tISS\t\tF\ttwo-component response regulator CbrB\tcbrB|two-component response regulator CbrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726\tcbrB\t\tGO:0090368\tPMID:11401699\tIMP\t\tP\ttwo-component response regulator CbrB\tcbrB|two-component response regulator CbrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726\tcbrB\t\tGO:2001158\tPMID:11401699\tIMP\t\tP\ttwo-component response regulator CbrB\tcbrB|two-component response regulator CbrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4727\tpcnB\t\tGO:0006378\tPMID:20482591\tISS\t\tP\tpoly(A) polymerase\tplasmid copy number protein|polynucleotide adenylyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4727\tpcnB\t\tGO:0004652\tPMID:20482591\tISS\t\tF\tpoly(A) polymerase\tplasmid copy number protein|polynucleotide adenylyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4728\tfolK\t\tGO:0003848\tPMID:1325970\tISS\t\tF\t2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase\t7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase|6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4731\tpanD\t\tGO:0016540\tPMID:9169598\tISS\t\tP\taspartate 1-decarboxylase precursor\taspartate alpha-decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4732\tpgi\t\tGO:0004347\tPMID:7004378\tISS\t\tF\tglucose-6-phosphate isomerase\tphosphohexomutase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4732\tpgi\t\tGO:0006096\tPMID:5337843\tISS\t\tP\tglucose-6-phosphate isomerase\tphosphohexomutase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4732\tpgi\t\tGO:0034599\tPMID:18368388\tISS\t\tP\tglucose-6-phosphate isomerase\tphosphohexomutase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4740\tpnp\t\tGO:0004654\tPMID:13438894\tISS\t\tF\tpolyribonucleotide nucleotidyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4741\trpsO\t\tGO:0006412\tPMID:7685101\tISS\t\tP\t30S ribosomal protein S15\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4741\trpsO\t\tGO:0003723\tPMID:7685101\tISS\t\tF\t30S ribosomal protein S15\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4743\trbfA\t\tGO:0043024\tPMID:7535280\tISS\t\tF\tribosome-binding factor A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4743\trbfA\t\tGO:0009409\tPMID:8898389\tISS\t\tP\tribosome-binding factor A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4743\trbfA\t\tGO:0030490\tPMID:9422595\tISS\t\tP\tribosome-binding factor A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4744\tinfB\t\tGO:0006413\tPMID:15385567\tIMP\t\tP\ttranslation initiation factor IF-2\tinitiation factor IF2-alpha\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4747\tsecG\t\tGO:0043952\tPMID:7650029\tISS\t\tP\tsecretion protein SecG\tpreprotein translocase band 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4747\tsecG\t\tGO:0065002\tPMID:7650029\tISS\t\tP\tsecretion protein SecG\tpreprotein translocase band 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4747\tsecG\t\tGO:0006886\tPMID:7650029\tISS\t\tP\tsecretion protein SecG\tpreprotein translocase band 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4748\ttpiA\t\tGO:0004807\tPMID:6214548\tISS\t\tF\ttriosephosphate isomerase\ttpi|TIM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4748\ttpiA\t\tGO:0006094\tPMID:11947134\tISS\t\tP\ttriosephosphate isomerase\ttpi|TIM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4749\tglmM\t\tGO:0008966\tPMID:10913078\tIDA\t\tF\tphosphoglucosamine mutase\tmrsA|yhbF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4749\tglmM\t\tGO:0004615\tPMID:10913078\tIDA\t\tF\tphosphoglucosamine mutase\tmrsA|yhbF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4749\tglmM\t\tGO:0004614\tPMID:10913078\tIDA\t\tF\tphosphoglucosamine mutase\tmrsA|yhbF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4749\tglmM\t\tGO:0009252\tPMID:10913078\tIDA\t\tP\tphosphoglucosamine mutase\tmrsA|yhbF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4750\tfolP\t\tGO:0004156\tPMID:1657875\tISS\t\tF\tdihydropteroate synthase\tdhpS|DHPS|dihydropteroate pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4750\tfolP\t\tGO:0003848\tPMID:1657875\tISS\t\tF\tdihydropteroate synthase\tdhpS|DHPS|dihydropteroate pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4750\tfolP\t\tGO:0005737\tPMID:1657875\tISS\t\tC\tdihydropteroate synthase\tdhpS|DHPS|dihydropteroate pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4750\tfolP\t\tGO:0046656\tPMID:1522070\tISS\t\tP\tdihydropteroate synthase\tdhpS|DHPS|dihydropteroate pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4750\tfolP\t\tGO:0004156\tPMID:1657875\tIDA\t\tF\tdihydropteroate synthase\tdhpS|DHPS|dihydropteroate pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4751\tftsH\t\tGO:0016887\tPMID:7781608\tISS\t\tF\tcell division protein FtsH\ttolZ|mrsC|hflB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4751\tftsH\t\tGO:0071236\tPMID:21764915\tIMP\t\tP\tcell division protein FtsH\ttolZ|mrsC|hflB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4751\tftsH\t\tGO:0006508\tPMID:7781608\tISS\t\tP\tcell division protein FtsH\ttolZ|mrsC|hflB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4752\tftsJ\t\tGO:0008649\tPMID:10748051\tISS\t\tF\tcell division protein FtsJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4752\tftsJ\t\tGO:0001510\tPMID:10748051\tISS\t\tP\tcell division protein FtsJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4752\tftsJ\t\tGO:0006412\tPMID:10814528\tISS\t\tP\tcell division protein FtsJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4755\tgreA\t\tGO:0006354\tPMID:1384037\tISS\t\tP\ttranscription elongation factor GreA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4755\tgreA\t\tGO:0001108\tPMID:10625443\tISS\t\tF\ttranscription elongation factor GreA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4756\tcarB\t\tGO:0006536\tPMID:6402363\tIDA\t\tP\tcarbamoylphosphate synthetase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4756\tcarB\t\tGO:0004088\tPMID:6402363\tIDA\t\tF\tcarbamoylphosphate synthetase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4756\tcarB\t\tGO:0071230\tPMID:8169201\tIDA\t\tP\tcarbamoylphosphate synthetase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4758\tcarA\t\tGO:0071230\tPMID:8169201\tIDA\t\tP\tcarbamoyl-phosphate synthase small chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4760\tdnaJ\t\tGO:0034605\tPMID:3003085\tISS\t\tP\tDnaJ protein\theat shock protein DnaJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4760\tdnaJ\t\tGO:0042158\tPMID:16109938\tISS\t\tP\tDnaJ protein\theat shock protein DnaJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4760\tdnaJ\t\tGO:0006260\tPMID:360036\tISS\t\tP\tDnaJ protein\theat shock protein DnaJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4760\tdnaJ\t\tGO:0006508\tPMID:3149251\tISS\t\tP\tDnaJ protein\theat shock protein DnaJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4760\tdnaJ\t\tGO:0006457\tPMID:8898387\tISS\t\tP\tDnaJ protein\theat shock protein DnaJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0042158\tPMID:16109938\tISS\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0006260\tPMID:6086613\tISS\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0016887\tPMID:6314326\tISS\t\tF\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0046777\tPMID:1835085\tISS\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0006508\tPMID:3149251\tISS\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0006457\tPMID:8898387\tISS\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0051701\tPMID:28758636\tIMP\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0043107\tPMID:28758636\tIMP\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0071977\tPMID:28758636\tIMP\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0030254\tPMID:28758636\tIMP\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4762\tgrpE\t\tGO:0034605\tPMID:2424889\tISS\t\tP\theat shock protein GrpE\tHsp24|heat shock protein B25.3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4762\tgrpE\t\tGO:0006508\tPMID:3149251\tISS\t\tP\theat shock protein GrpE\tHsp24|heat shock protein B25.3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4762\tgrpE\t\tGO:0006457\tPMID:8898387\tISS\t\tP\theat shock protein GrpE\tHsp24|heat shock protein B25.3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4763\trecN\t\tGO:0006302\tPMID:6092851\tISS\t\tP\tDNA repair protein RecN\trecombination protein N\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4763\trecN\t\tGO:0071479\tPMID:6092851\tISS\t\tP\tDNA repair protein RecN\trecombination protein N\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4763\trecN\t\tGO:0000724\tPMID:2993876\tISS\t\tP\tDNA repair protein RecN\trecombination protein N\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4763\trecN\t\tGO:0009432\tPMID:2997124\tISS\t\tP\tDNA repair protein RecN\trecombination protein N\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4764\tfur\t\tGO:1900705\tPMID:8885270\tIMP\t\tP\tferric uptake regulation protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4764\tfur\t\tGO:0008198\tPMID:8522528\tTAS\t\tF\tferric uptake regulation protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4764\tfur\t\tGO:0044212\tPMID:8522528\tIDA\t\tF\tferric uptake regulation protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4764\tfur\t\tGO:1901668\tPMID:8763923\tIMP\t\tP\tferric uptake regulation protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4764\tfur\t\tGO:2000470\tPMID:8763923\tIMP\t\tP\tferric uptake regulation protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4764\tfur\t\tGO:0051350\tPMID:9045799\tIMP\t\tP\tferric uptake regulation protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4771\tlldD\t\tGO:0004459\tPMID:18473\tISS\t\tF\tL-lactate dehydrogenase\tlctD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4771\tlldD\t\tGO:0019516\tPMID:8407843\tISS\t\tP\tL-lactate dehydrogenase\tlctD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4771\tlldD\t\tGO:0004459\tPMID:30066495\tIGI\tPseudoCAP:PA2382\tF\tL-lactate dehydrogenase\tlctD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4773\tspeD2\t\tGO:0004014\tPMID:22155771\tIMP\t\tF\tSpeD2\tspeD2|SpeD2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4774\tspeE2\t\tGO:0008295\tPMID:22155771\tIMP\t\tP\tSpeE2\tspeE2|SpeE2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4776\tpmrA\t\tGO:0000156\tPMID:14507375\tISS\t\tF\tPmrA: two-component regulator system response regulator PmrA\tpmrA|PmrA: two-component regulator system response regulator PmrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4776\tpmrA\t\tGO:0000160\tPMID:14507375\tIDA\t\tP\tPmrA: two-component regulator system response regulator PmrA\tpmrA|PmrA: two-component regulator system response regulator PmrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4777\tpmrB\t\tGO:0000160\tPMID:14507375\tIDA\t\tP\tPmrB: two-component regulator system signal sensor kinase PmrB\tpmrB|PmrB: two-component regulator system signal sensor kinase PmrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4777\tpmrB\t\tGO:0000155\tPMID:14507375\tISS\t\tF\tPmrB: two-component regulator system signal sensor kinase PmrB\tpmrB|PmrB: two-component regulator system signal sensor kinase PmrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4777\tpmrB\t\tGO:0071236\tPMID:14702327\tISS\tPseudoCAP:PAK_05274\tP\tPmrB: two-component regulator system signal sensor kinase PmrB\tpmrB|PmrB: two-component regulator system signal sensor kinase PmrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4778\tcueR\t\tGO:0045893\tPMID:20233934\tIMP\t\tP\tCueR\tybbI|cueR|CueR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4778\tcueR\t\tGO:0044212\tPMID:20233934\tIDA\t\tF\tCueR\tybbI|cueR|CueR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4781\tPA4781\t\tGO:2000147\tPMID:19170727\tIMP\t\tP\tcyclic di-GMP phosphodiesterase\tcyclic di-GMP phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4781\tPA4781\t\tGO:0071111\tPMID:19170727\tIDA\t\tF\tcyclic di-GMP phosphodiesterase\tcyclic di-GMP phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4781\tPA4781\t\tGO:1900231\tPMID:19170727\tIMP\t\tP\tcyclic di-GMP phosphodiesterase\tcyclic di-GMP phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4807\tselB\t\tGO:0001514\tPMID:2531290\tISS\t\tP\tselenocysteine-specific elongation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4807\tselB\t\tGO:0000049\tPMID:1939093\tISS\t\tF\tselenocysteine-specific elongation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4807\tselB\t\tGO:0035368\tPMID:8483932\tISS\t\tF\tselenocysteine-specific elongation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4808\tselA\t\tGO:0016260\tPMID:2962989\tISS\t\tP\tL-seryl-tRNA(ser) selenium transferase\tfdhA|selenocysteine synthase, selenocysteinyl-trna(sec) synthase|cysteinyl-tRNA(ser) selenium transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4808\tselA\t\tGO:0097056\tPMID:2007584\tISS\t\tP\tL-seryl-tRNA(ser) selenium transferase\tfdhA|selenocysteine synthase, selenocysteinyl-trna(sec) synthase|cysteinyl-tRNA(ser) selenium transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4808\tselA\t\tGO:0004125\tPMID:2007584\tISS\t\tF\tL-seryl-tRNA(ser) selenium transferase\tfdhA|selenocysteine synthase, selenocysteinyl-trna(sec) synthase|cysteinyl-tRNA(ser) selenium transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4808\tselA\t\tGO:0030170\tPMID:2007584\tISS\t\tF\tL-seryl-tRNA(ser) selenium transferase\tfdhA|selenocysteine synthase, selenocysteinyl-trna(sec) synthase|cysteinyl-tRNA(ser) selenium transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4809\tfdhE\t\tGO:0008863\tPMID:3077634\tISS\t\tF\tFdhE protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4809\tfdhE\t\tGO:0009061\tPMID:3077634\tISS\t\tP\tFdhE protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4809\tfdhE\t\tGO:0008199\tPMID:18716757\tISS\t\tF\tFdhE protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4810\tfdnI\t\tGO:0009061\tPMID:1099093\tISS\t\tP\tnitrate-inducible formate dehydrogenase, gamma subunit\tfdhI|formate dehydrogenase cytochrome b556 subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4810\tfdnI\t\tGO:0017004\tPMID:1099093\tISS\t\tP\tnitrate-inducible formate dehydrogenase, gamma subunit\tfdhI|formate dehydrogenase cytochrome b556 subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4810\tfdnI\t\tGO:0036397\tPMID:3038081\tIDA\t\tF\tnitrate-inducible formate dehydrogenase, gamma subunit\tfdhI|formate dehydrogenase cytochrome b556 subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4811\tfdnH\t\tGO:0009061\tPMID:1099093\tISS\t\tP\tnitrate-inducible formate dehydrogenase, beta subunit\tfdhH|iron-sulfur subunit|nitrate-inducible formate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4811\tfdnH\t\tGO:0036397\tPMID:3038081\tIDA\t\tF\tnitrate-inducible formate dehydrogenase, beta subunit\tfdhH|iron-sulfur subunit|nitrate-inducible formate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4812\tfdnG\t\tGO:0009061\tPMID:1099093\tISS\t\tP\tformate dehydrogenase-O, major subunit\tfdhG|nitrate-inducible formate dehydrogenase major subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4812\tfdnG\t\tGO:0036397\tPMID:3038081\tIDA\t\tF\tformate dehydrogenase-O, major subunit\tfdhG|nitrate-inducible formate dehydrogenase major subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4813\tlipC\t\tGO:0015628\tPMID:10564475\tIDA\t\tP\tlipase LipC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4813\tlipC\t\tGO:0043952\tPMID:10564475\tIDA\t\tP\tlipase LipC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4813\tlipC\t\tGO:0016298\tPMID:10564475\tIDA\t\tF\tlipase LipC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4814\tfadH2\t\tGO:0008670\tPMID:2506179\tISS\t\tF\t2,4-dienoyl-CoA reductase FadH2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4818\tPA4818\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT83\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4819\tPA4819\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tprobable glycosyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4827\tPA4827\t\tGO:0004060\tPMID:15447630\tIDA\t\tF\tarylamine N-acetyltransferase\tnat|NAT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4829\tlpd3\t\tGO:0004148\tPMID:1722146\tISS\t\tF\tdihydrolipoamide dehydrogenase 3\tLPD-3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4839\tspeA\t\tGO:0008792\tPMID:12634339\tIMP\t\tF\targinine decarboxylase (ADC)\tspeA|arginine decarboxylase (ADC)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4839\tspeA\t\tGO:0033388\tPMID:12634339\tIMP\t\tP\targinine decarboxylase (ADC)\tspeA|arginine decarboxylase (ADC)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4843\tgcbA\t\tGO:0052621\tPMID:24603766\tIMP\t\tF\tGcbA\tAdcA|adcA|GcbA|gcbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4843\tgcbA\t\tGO:1900233\tPMID:24603766\tIMP\t\tP\tGcbA\tAdcA|adcA|GcbA|gcbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4843\tgcbA\t\tGO:1900189\tPMID:24891445\tISS\tUniProtKB:Q3KIN9\tP\tGcbA\tAdcA|adcA|GcbA|gcbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4843\tgcbA\t\tGO:1902201\tPMID:24891445\tISS\tUniProtKB:Q3KIN9\tP\tGcbA\tAdcA|adcA|GcbA|gcbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4843\tgcbA\t\tGO:0052621\tPMID:24603766\tEXP\t\tF\tGcbA\tAdcA|adcA|GcbA|gcbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4843\tgcbA\t\tGO:0052621\tPMID:24891445\tIDA\t\tF\tGcbA\tAdcA|adcA|GcbA|gcbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4843\tgcbA\t\tGO:1902065\tPMID:25331436\tIMP\t\tP\tGcbA\tAdcA|adcA|GcbA|gcbA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4844\tctpL\t\tGO:0050918\tPMID:24038698\tIMP\t\tP\tCtpL\tCtpL|ctpL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4844\tctpL\t\tGO:0006935\tPMID:10852870\tIMP\t\tP\tCtpL\tCtpL|ctpL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4844\tctpL\t\tGO:0010247\tPMID:10852870\tIMP\t\tP\tCtpL\tCtpL|ctpL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4846\taroQ1\t\tGO:0003855\tPMID:2950851\tISS\t\tF\t3-dehydroquinate dehydratase\taroD1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4846\taroQ1\t\tGO:0019632\tPMID:2950851\tISS\t\tP\t3-dehydroquinate dehydratase\taroD1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4846\taroQ1\t\tGO:0009073\tPMID:2950851\tISS\t\tP\t3-dehydroquinate dehydratase\taroD1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4850\tprmA\t\tGO:0008276\tPMID:8226664\tISS\t\tF\tribosomal protein L11 methyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4857\ttspR\t\tGO:0050714\tPMID:26858696\tIMP\t\tP\tTspR\ttspR|TspR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4857\ttspR\t\tGO:0030254\tPMID:26858696\tIMP\t\tP\tTspR\ttspR|TspR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4857\ttspR\t\tGO:1900191\tPMID:26858696\tIMP\t\tP\tTspR\ttspR|TspR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4857\ttspR\t\tGO:0071978\tPMID:26858696\tIMP\t\tP\tTspR\ttspR|TspR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4857\ttspR\t\tGO:1902021\tPMID:26858696\tIMP\t\tP\tTspR\ttspR|TspR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4865\tureA\t\tGO:0009039\tPMID:7559354\tISS\t\tF\turease gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4865\tureA\t\tGO:0035550\tPMID:7559354\tISS\t\tC\turease gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4865\tureA\t\tGO:0043419\tPMID:7559354\tISS\t\tP\turease gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4865\tureA\t\tGO:0016151\tPMID:7559354\tISS\t\tF\turease gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4866\tPA4866\t\tGO:0009039\tPMID:7559354\tISS\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4866\tPA4866\t\tGO:0035550\tPMID:7559354\tISS\t\tC\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4866\tPA4866\t\tGO:0016151\tPMID:7559354\tISS\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4866\tPA4866\t\tGO:0043419\tPMID:7559354\tISS\t\tP\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4868\tureC\t\tGO:0009039\tPMID:7559354\tISS\t\tF\turease alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4868\tureC\t\tGO:0035550\tPMID:7559354\tISS\t\tC\turease alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4868\tureC\t\tGO:0043419\tPMID:7559354\tISS\t\tP\turease alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4868\tureC\t\tGO:0016151\tPMID:7559354\tISS\t\tF\turease alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4878\tbrlR\t\tGO:0045893\tPMID:22730129\tIDA\t\tP\tBrlR\tBrlR|brlR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4878\tbrlR\t\tGO:0045892\tPMID:23935054\tIDA\t\tP\tBrlR\tBrlR|brlR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4890\tdesT\t\tGO:0045922\tPMID:16573679\tIMP\t\tP\tDesT\tyijC|desT|DesT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4891\tureE\t\tGO:0051604\tPMID:24115911\tISS\t\tP\turease accessory protein UreE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4891\tureE\t\tGO:0008270\tPMID:22010876\tISS\t\tF\turease accessory protein UreE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4892\tureF\t\tGO:0051604\tPMID:24115911\tISS\t\tP\turease accessory protein UreF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4893\tureG\t\tGO:0051604\tPMID:24115911\tISS\t\tP\turease accessory protein UreG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4893\tureG\t\tGO:0003924\tPMID:15542602\tISS\tUniProtKB:Q9RP19\tF\turease accessory protein UreG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4893\tureG\t\tGO:0008270\tPMID:15542602\tISS\tUniProtKB:Q9RP19\tF\turease accessory protein UreG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4895\tPA4895\t\tGO:0016989\tPMID:18086184\tNAS\t\tF\tprobable transmembrane sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4896\tPA4896\t\tGO:0016987\tPMID:18086184\tIMP\t\tF\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4896\tPA4896\t\tGO:0034756\tPMID:18086184\tIMP\t\tP\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4896\tPA4896\t\tGO:0005829\tPMID:18086184\tNAS\t\tC\tprobable sigma-70 factor, ECF subfamily\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4897\tPA4897\t\tGO:0038023\tPMID:18086184\tISS\t\tF\tTonB-dependent receptor\toptI|TonB-dependent receptor|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4897\tPA4897\t\tGO:0007166\tPMID:18086184\tISS\t\tP\tTonB-dependent receptor\toptI|TonB-dependent receptor|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4897\tPA4897\t\tGO:0019867\tPMID:18086184\tIDA\t\tC\tTonB-dependent receptor\toptI|TonB-dependent receptor|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4910\tPA4910\t\tGO:0042941\tPMID:18833300\tIMP\t\tP\tbranched chain amino acid ABC transporter ATP binding protein\tbranched chain amino acid ABC transporter ATP binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4912\tPA4912\t\tGO:0042941\tPMID:18833300\tIMP\t\tP\tbranched chain amino acid ABC transporter membrane protein\tbranched chain amino acid ABC transporter membrane protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4919\tpncB1\t\tGO:0004516\tPMID:18490451\tISS\t\tF\tnicotinate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4919\tpncB1\t\tGO:0009435\tPMID:18490451\tISS\t\tP\tnicotinate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4919\tpncB1\t\tGO:0034355\tPMID:18490451\tISS\t\tP\tnicotinate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4921\tchoE\t\tGO:0004104\tPMID:22192836\tIDA\t\tF\tcholinesterase, ChoE\tacetylcholinesterase, AchE|achE|cholinesterase, ChoE|choE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4922\tazu\t\tGO:0046914\tPMID:23911566\tIDA\t\tF\tazurin precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4922\tazu\t\tGO:0008270\tPMID:14758526\tIMP\t\tF\tazurin precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4922\tazu\t\tGO:0005507\tPMID:14758526\tIMP\t\tF\tazurin precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4923\tPA4923\t\tGO:0009691\tPMID:29901273\tTAS\t\tP\ttype-I LOG protein\ttype-I LOG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4923\tPA4923\t\tGO:0016799\tPMID:29901273\tIDA\t\tF\ttype-I LOG protein\ttype-I LOG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4930\talr\t\tGO:0008784\tPMID:20971724\tIDA\t\tF\tbiosynthetic alanine racemase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0006260\tPMID:3007474\tISS\t\tP\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0032508\tPMID:3007474\tISS\t\tP\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0006270\tPMID:345277\tISS\t\tP\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0016887\tPMID:11061975\tISS\t\tF\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0003678\tPMID:3007474\tISS\t\tF\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0005524\tPMID:11061975\tISS\t\tF\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0006270\tPMID:345277\tISS\t\tP\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4932\trplI\t\tGO:0006412\tPMID:8780779\tISS\t\tP\t50S ribosomal protein L9\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4932\trplI\t\tGO:0003723\tPMID:8780779\tISS\t\tF\t50S ribosomal protein L9\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4934\trpsR\t\tGO:0006412\tPMID:2459389\tISS\t\tP\t30S ribosomal protein S18\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4934\trpsR\t\tGO:0003723\tPMID:2459389\tISS\t\tF\t30S ribosomal protein S18\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4935\trpsF\t\tGO:0006412\tPMID:2459389\tISS\t\tP\t30S ribosomal protein S6\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4935\trpsF\t\tGO:0003723\tPMID:2459389\tISS\t\tF\t30S ribosomal protein S6\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4937\trnr\t\tGO:0000175\tPMID:11948193\tISS\t\tF\texoribonuclease RNase R\tvacB|virulence protein VacB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4937\trnr\t\tGO:0008997\tPMID:11948193\tISS\t\tF\texoribonuclease RNase R\tvacB|virulence protein VacB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4937\trnr\t\tGO:0006402\tPMID:15664199\tISS\t\tP\texoribonuclease RNase R\tvacB|virulence protein VacB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4937\trnr\t\tGO:0034458\tPMID:20023028\tISS\t\tF\texoribonuclease RNase R\tvacB|virulence protein VacB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4941\thflC\t\tGO:0045861\tPMID:8947034\tISS\t\tP\tprotease subunit HflC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4942\thflK\t\tGO:0045861\tPMID:8947034\tISS\t\tP\tprotease subunit HflK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4944\thfq\t\tGO:0006417\tPMID:24945892\tIDA\t\tP\tHfq\thfq|Hfq\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4944\thfq\t\tGO:0045974\tPMID:24945892\tIDA\t\tP\tHfq\thfq|Hfq\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4944\thfq\t\tGO:0009405\tPMID:14521880\tIMP\t\tP\tHfq\thfq|Hfq\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4944\thfq\t\tGO:0009372\tPMID:16468994\tIMP\t\tP\tHfq\thfq|Hfq\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4944\thfq\t\tGO:0043487\tPMID:16468994\tIMP\t\tP\tHfq\thfq|Hfq\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4944\thfq\t\tGO:0043609\tPMID:24945892\tIDA\t\tP\tHfq\thfq|Hfq\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4945\tmiaA\t\tGO:0052381\tPMID:4341485\tISS\t\tF\tdelta 2-isopentenylpyrophosphate transferase\ttRNA:isopentenyladenine transferase|tRNA prenyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4945\tmiaA\t\tGO:0006400\tPMID:4341485\tISS\t\tP\tdelta 2-isopentenylpyrophosphate transferase\ttRNA:isopentenyladenine transferase|tRNA prenyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4946\tmutL\t\tGO:0006298\tPMID:2665076\tISS\t\tP\tDNA mismatch repair protein MutL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4946\tmutL\t\tGO:0003677\tPMID:12606120\tISS\t\tF\tDNA mismatch repair protein MutL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4946\tmutL\t\tGO:0000018\tPMID:2555716\tISS\t\tP\tDNA mismatch repair protein MutL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4951\torn\t\tGO:0008408\tPMID:26305928\tIGI\t\tF\toligoribonuclease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4951\torn\t\tGO:1900191\tPMID:26305928\tIGI\t\tP\toligoribonuclease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4953\tmotB\t\tGO:0071973\tPMID:15375113\tIMP\t\tP\tchemotaxis protein MotB\trpmB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4953\tmotB\t\tGO:0071978\tPMID:15629949\tIMP\t\tP\tchemotaxis protein MotB\trpmB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4953\tmotB\t\tGO:0071973\tPMID:15375113\tIMP\t\tP\tchemotaxis protein MotB\trpmB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4953\tmotB\t\tGO:0071978\tPMID:15629949\tIMP\t\tP\tchemotaxis protein MotB\trpmB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4953\tmotB\t\tGO:0071978\tPMID:25349157\tIMP\t\tP\tchemotaxis protein MotB\trpmB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4954\tmotA\t\tGO:0071973\tPMID:15375113\tIMP\t\tP\tchemotaxis protein MotA\trpmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4954\tmotA\t\tGO:0071978\tPMID:15629949\tIMP\t\tP\tchemotaxis protein MotA\trpmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4954\tmotA\t\tGO:0071973\tPMID:15375113\tIMP\t\tP\tchemotaxis protein MotA\trpmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4954\tmotA\t\tGO:0071978\tPMID:15629949\tIMP\t\tP\tchemotaxis protein MotA\trpmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4954\tmotA\t\tGO:0071978\tPMID:25349157\tIMP\t\tP\tchemotaxis protein MotA\trpmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4956\trhdA\t\tGO:0004792\tPMID:17098912\tIMP\t\tF\tthiosulfate:cyanide sulfurtransferase\trhodanese-like protein|thiosulfate:cyanide sulfurtransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4964\tparC\t\tGO:0003918\tPMID:10049263\tIDA\t\tF\ttopoisomerase IV subunit A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4964\tparC\t\tGO:0006265\tPMID:10049263\tIDA\t\tP\ttopoisomerase IV subunit A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4964\tparC\t\tGO:0009340\tPMID:10049263\tIDA\t\tC\ttopoisomerase IV subunit A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4967\tparE\t\tGO:0003918\tPMID:10049263\tIDA\t\tF\ttopoisomerase IV subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4967\tparE\t\tGO:0006265\tPMID:10049263\tIDA\t\tP\ttopoisomerase IV subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4967\tparE\t\tGO:0009340\tPMID:10049263\tIDA\t\tC\ttopoisomerase IV subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4973\tthiC\t\tGO:0009228\tPMID:9139923\tISS\t\tP\tthiamin biosynthesis protein ThiC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4975\tPA4975\t\tGO:0003955\tPMID:25085734\tIMP\t\tF\tNAD(P)H quinone oxidoreductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4976\taruH\t\tGO:0008483\tPMID:17416668\tIDA\t\tF\tArginine:Pyruvate Transaminas, AruH\tASPAT|aruH|Arginine:Pyruvate Transaminas, AruH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4976\taruH\t\tGO:0006527\tPMID:17416668\tIDA\t\tP\tArginine:Pyruvate Transaminas, AruH\tASPAT|aruH|Arginine:Pyruvate Transaminas, AruH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4988\twaaA\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT30\tF\t3-deoxy-D-manno-octulosonic-acid (KDO) transferase\tkdtA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4997\tmsbA\t\tGO:0016887\tPMID:17644517\tIDA\t\tF\ttransport protein MsbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4997\tmsbA\t\tGO:0005347\tPMID:17644517\tIDA\t\tF\ttransport protein MsbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4997\tmsbA\t\tGO:0009245\tPMID:17644517\tIMP\t\tP\ttransport protein MsbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4997\tmsbA\t\tGO:0015920\tPMID:17644517\tIMP\t\tP\ttransport protein MsbA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0009243\tPMID:15838026\tIMP\t\tP\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0008754\tPMID:15838026\tIMP\t\tF\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0043107\tPMID:15838026\tIMP\t\tP\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0071977\tPMID:15838026\tIMP\t\tP\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0044780\tPMID:15838026\tIMP\t\tP\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0009297\tPMID:15838026\tIMP\t\tP\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0016874\tPMID:17697256\tIDA\t\tF\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0009297\tPMID:15838026\tIMP\t\tP\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0044780\tPMID:15838026\tIMP\t\tP\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0009243\tPMID:15838026\tIMP\t\tP\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0005886\tPMID:17697256\tIDA\t\tC\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0098567\tPMID:20824106\tIDA\t\tC\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4999\twaaL\t\tGO:0016757\tPMID:17697256\tIDA\t\tF\tO-antigen ligase, WaaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5000\twapR\t\tGO:0016740\tPMID:18178733\tIMP\t\tF\talpha-1,3-rhamnosyltransferase WapR\twapR|alpha-1,3-rhamnosyltransferase WapR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5000\twapR\t\tGO:0009243\tPMID:18178733\tIMP\t\tP\talpha-1,3-rhamnosyltransferase WapR\twapR|alpha-1,3-rhamnosyltransferase WapR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5000\twapR\t\tGO:0009244\tPMID:18178733\tIMP\t\tP\talpha-1,3-rhamnosyltransferase WapR\twapR|alpha-1,3-rhamnosyltransferase WapR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5000\twapR\t\tGO:0009244\tPMID:22685285\tIDA\t\tP\talpha-1,3-rhamnosyltransferase WapR\twapR|alpha-1,3-rhamnosyltransferase WapR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5000\twapR\t\tGO:0016757\tPMID:18178733\tIDA\t\tF\talpha-1,3-rhamnosyltransferase WapR\twapR|alpha-1,3-rhamnosyltransferase WapR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5000\twapR\t\tGO:0044010\tPMID:19717596\tIDA\t\tP\talpha-1,3-rhamnosyltransferase WapR\twapR|alpha-1,3-rhamnosyltransferase WapR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5000\twapR\t\tGO:0015920\tPMID:19589832\tIDA\t\tP\talpha-1,3-rhamnosyltransferase WapR\twapR|alpha-1,3-rhamnosyltransferase WapR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5000\twapR\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\talpha-1,3-rhamnosyltransferase WapR\twapR|alpha-1,3-rhamnosyltransferase WapR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5001\tssg\t\tGO:0016757\tPMID:21166709\tIEA\t\tF\tcell surface-sugar biosynthetic glycosyltransferase, Ssg\tssg|cell surface-sugar biosynthetic glycosyltransferase, Ssg|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5001\tssg\t\tGO:0009103\tPMID:21166709\tISS\tUniProtKB:E2FL54\tP\tcell surface-sugar biosynthetic glycosyltransferase, Ssg\tssg|cell surface-sugar biosynthetic glycosyltransferase, Ssg|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5002\tdnpA\t\tGO:0009244\tPMID:24692291\tISS\tPseudoCAP:PA14_66140\tP\tde-N-acetylase involved in persistence, DnpA\tdnpA|de-N-acetylase involved in persistence, DnpA|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5002\tdnpA\t\tGO:0046677\tPMID:24692291\tISS\tPseudoCAP:PA14_66140\tP\tde-N-acetylase involved in persistence, DnpA\tdnpA|de-N-acetylase involved in persistence, DnpA|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5003\tPA5003\t\tGO:1900190\tPMID:21700666\tIDA\t\tP\tMig-14-like protein\tMig-14-like protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5003\tPA5003\t\tGO:0009103\tPMID:21700666\tIMP\t\tP\tMig-14-like protein\tMig-14-like protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5003\tPA5003\t\tGO:1901652\tPMID:21700666\tISS\t\tP\tMig-14-like protein\tMig-14-like protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5004\twapH\t\tGO:0016757\tPMID:21700666\tTAS\t\tF\tWapH\twapH|WapH|probable glycosyl transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5004\twapH\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tWapH\twapH|WapH|probable glycosyl transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5005\tPA5005\t\tGO:0016740\tPMID:21810964\tIEA\t\tF\tprobable carbamoyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5006\tPA5006\t\tGO:0009244\tPMID:21810964\tIGI\t\tP\tputative kinase\tputative kinase|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5007\twapG\t\tGO:0009244\tPMID:21810964\tIGI\t\tP\tWapG\tinaA|wapQ|waaQ|WaaQ|hypothetical protein|wapG|WapG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5007\twapG\t\tGO:0016301\tPMID:10692150\tIMP\t\tF\tWapG\tinaA|wapQ|waaQ|WaaQ|hypothetical protein|wapG|WapG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5008\twapP\t\tGO:0016301\tPMID:10692150\tISS\t\tF\tWapP\twaaX|wapP|waaP|WaaP|hypothetical protein|WapP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5008\twapP\t\tGO:0009244\tPMID:10692150\tIMP\t\tP\tWapP\twaaX|wapP|waaP|WaaP|hypothetical protein|WapP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5009\twaaP\t\tGO:0016301\tPMID:11741974\tIMP\t\tF\tlipopolysaccharide kinase WaaP\trfaP|RfaP protein|heptose kinase WaaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5009\twaaP\t\tGO:0009244\tPMID:11741974\tIMP\t\tP\tlipopolysaccharide kinase WaaP\trfaP|RfaP protein|heptose kinase WaaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5009\twaaP\t\tGO:0042493\tPMID:11741974\tIMP\t\tP\tlipopolysaccharide kinase WaaP\trfaP|RfaP protein|heptose kinase WaaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5009\twaaP\t\tGO:0016301\tPMID:11741974\tIDA\t\tF\tlipopolysaccharide kinase WaaP\trfaP|RfaP protein|heptose kinase WaaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5009\twaaP\t\tGO:0016301\tPMID:12019135\tIDA\t\tF\tlipopolysaccharide kinase WaaP\trfaP|RfaP protein|heptose kinase WaaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5009\twaaP\t\tGO:0009244\tPMID:10692150\tIDA\t\tP\tlipopolysaccharide kinase WaaP\trfaP|RfaP protein|heptose kinase WaaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5009\twaaP\t\tGO:0042493\tPMID:10692150\tIMP\t\tP\tlipopolysaccharide kinase WaaP\trfaP|RfaP protein|heptose kinase WaaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5009\twaaP\t\tGO:0042493\tPMID:21810964\tIDA\t\tP\tlipopolysaccharide kinase WaaP\trfaP|RfaP protein|heptose kinase WaaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5010\twaaG\t\tGO:0009103\tPMID:21042030\tIMP\t\tP\tUDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG\trfaG|LPS core biosynthetic gene WaaG|Glucosyltransferase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5010\twaaG\t\tGO:0009245\tPMID:21042030\tISS\t\tP\tUDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG\trfaG|LPS core biosynthetic gene WaaG|Glucosyltransferase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5010\twaaG\t\tGO:0046527\tPMID:21042030\tISS\t\tF\tUDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG\trfaG|LPS core biosynthetic gene WaaG|Glucosyltransferase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5010\twaaG\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tUDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG\trfaG|LPS core biosynthetic gene WaaG|Glucosyltransferase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5011\twaaC\t\tGO:0009244\tPMID:9171387\tIDA\t\tP\theptosyltransferase I\trfaC|Heptose I transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5011\twaaC\t\tGO:0071968\tPMID:9171387\tISS\tUniProtKB:P26469\tF\theptosyltransferase I\trfaC|Heptose I transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5011\twaaC\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT9\tF\theptosyltransferase I\trfaC|Heptose I transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5012\twaaF\t\tGO:0009244\tPMID:9171387\tIDA\t\tP\theptosyltransferase II\trfaF|Heptose II transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5012\twaaF\t\tGO:0071968\tPMID:9171387\tISS\tUniProtKB:P37421\tF\theptosyltransferase II\trfaF|Heptose II transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5012\twaaF\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT9\tF\theptosyltransferase II\trfaF|Heptose II transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5013\tilvE\t\tGO:0004084\tPMID:378964\tISS\t\tF\tbranched-chain amino acid transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5013\tilvE\t\tGO:0009081\tPMID:378964\tISS\t\tP\tbranched-chain amino acid transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5014\tglnE\t\tGO:0018117\tPMID:18469098\tISS\t\tP\tglutamate-ammonia-ligase adenylyltransferase\tGlutamine-synthetase adenylyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5017\tdipA\t\tGO:0071111\tPMID:22493016\tIDA\t\tF\tDipA\tDipA|dipA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5017\tdipA\t\tGO:0043200\tPMID:22493016\tIMP\t\tP\tDipA\tDipA|dipA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5017\tdipA\t\tGO:0009405\tPMID:24901523\tIMP\t\tP\tDipA\tDipA|dipA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5018\tmsrA\t\tGO:0009405\tPMID:23687271\tIMP\t\tP\tpeptide methionine sulfoxide reductase\tpmsR|peptide met(o) reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5018\tmsrA\t\tGO:1901530\tPMID:23687271\tIMP\t\tP\tpeptide methionine sulfoxide reductase\tpmsR|peptide met(o) reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5018\tmsrA\t\tGO:0034599\tPMID:23687271\tIMP\t\tP\tpeptide methionine sulfoxide reductase\tpmsR|peptide met(o) reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5018\tmsrA\t\tGO:0008113\tPMID:23687271\tISS\t\tF\tpeptide methionine sulfoxide reductase\tpmsR|peptide met(o) reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5033\tPA5033\t\tGO:0005615\tPMID:25488299\tIDA\t\tC\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5035\tgltD\t\tGO:0004355\tPMID:4565085\tISS\t\tF\tglutamate synthase small chain\taspB|NADPH-GOGAT gltS beta chain\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5035\tgltD\t\tGO:0006537\tPMID:4565085\tISS\t\tP\tglutamate synthase small chain\taspB|NADPH-GOGAT gltS beta chain\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5036\tgltB\t\tGO:0004355\tPMID:4565085\tISS\t\tF\tglutamate synthase large chain precursor\taspB|GltS alpha chain|NADPH-GOGAT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5036\tgltB\t\tGO:0006537\tPMID:4565085\tISS\t\tP\tglutamate synthase large chain precursor\taspB|GltS alpha chain|NADPH-GOGAT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5039\taroK\t\tGO:0004765\tPMID:11483005\tISS\t\tF\tshikimate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5039\taroK\t\tGO:0019632\tPMID:15583379\tISS\t\tP\tshikimate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5039\taroK\t\tGO:0009073\tPMID:11483005\tISS\t\tP\tshikimate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5040\tpilQ\t\tGO:0043683\tPMID:7901733\tIMP\t\tP\tType 4 fimbrial biogenesis outer membrane protein PilQ precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5041\tpilP\t\tGO:0043683\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5041\tpilP\t\tGO:0043107\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5041\tpilP\t\tGO:0044096\tPMID:7565110\tIMP\t\tC\ttype 4 fimbrial biogenesis protein PilP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5041\tpilP\t\tGO:0043683\tPMID:7565110\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5041\tpilP\t\tGO:0043683\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5041\tpilP\t\tGO:0043683\tPMID:22053789\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5041\tpilP\t\tGO:0043683\tPMID:23457250\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5041\tpilP\t\tGO:0043107\tPMID:7565110\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5041\tpilP\t\tGO:0043107\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5041\tpilP\t\tGO:0043107\tPMID:22053789\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5041\tpilP\t\tGO:0043107\tPMID:23457250\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5042\tpilO\t\tGO:0043683\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5042\tpilO\t\tGO:0043107\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5042\tpilO\t\tGO:0044096\tPMID:7565110\tIMP\t\tC\ttype 4 fimbrial biogenesis protein PilO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5042\tpilO\t\tGO:0043683\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5042\tpilO\t\tGO:0043683\tPMID:7565110\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5042\tpilO\t\tGO:0043683\tPMID:23457250\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5042\tpilO\t\tGO:0043683\tPMID:22053789\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5042\tpilO\t\tGO:0043107\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5042\tpilO\t\tGO:0043107\tPMID:23457250\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5042\tpilO\t\tGO:0043107\tPMID:22053789\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilO\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5043\tpilN\t\tGO:0043683\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5043\tpilN\t\tGO:0043107\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5043\tpilN\t\tGO:0044096\tPMID:7565110\tIMP\t\tC\ttype 4 fimbrial biogenesis protein PilN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5043\tpilN\t\tGO:0043683\tPMID:7565110\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5043\tpilN\t\tGO:0043683\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5043\tpilN\t\tGO:0043107\tPMID:7565110\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5043\tpilN\t\tGO:0043107\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilN\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5044\tpilM\t\tGO:0043683\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5044\tpilM\t\tGO:0043107\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5044\tpilM\t\tGO:0044096\tPMID:7565110\tIMP\t\tC\ttype 4 fimbrial biogenesis protein PilM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5044\tpilM\t\tGO:0043683\tPMID:7565110\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5044\tpilM\t\tGO:0043683\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5044\tpilM\t\tGO:0043107\tPMID:7565110\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5044\tpilM\t\tGO:0043107\tPMID:19857645\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5045\tponA\t\tGO:0008658\tPMID:9358038\tIDA\t\tF\tpenicillin-binding protein 1A\tmrcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5045\tponA\t\tGO:0009273\tPMID:2211517\tISS\t\tP\tpenicillin-binding protein 1A\tmrcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5045\tponA\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT51\tF\tpenicillin-binding protein 1A\tmrcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5047\tPA5047\t\tGO:0008237\tPMID:9015299\tISS\tUniProtKB:P47154\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5049\trpmE\t\tGO:0008097\tPMID:7015289\tISS\t\tF\t50S ribosomal protein L31\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0006302\tPMID:8631700\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0006310\tPMID:8631700\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0010332\tPMID:8631700\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0046677\tPMID:8631700\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0006270\tPMID:7525276\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0006260\tPMID:11929519\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5051\targS\t\tGO:0006420\tPMID:37899\tISS\t\tP\targinyl-tRNA synthetase\targinine--tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5051\targS\t\tGO:0005524\tPMID:2183195\tISS\t\tF\targinyl-tRNA synthetase\targinine--tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5063\tubiE\t\tGO:0006744\tPMID:9045837\tISS\t\tP\tubiquinone biosynthesis methyltransferase UbiE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5063\tubiE\t\tGO:0009234\tPMID:9045837\tISS\t\tP\tubiquinone biosynthesis methyltransferase UbiE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5063\tubiE\t\tGO:0008169\tPMID:9045837\tISS\t\tF\tubiquinone biosynthesis methyltransferase UbiE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5065\tubiB\t\tGO:0006744\tPMID:10960098\tISS\t\tP\tubiquinone biosynthetic protein UbiB\tyigR|aarF|ubiB|ubiquinone biosynthetic protein UbiB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5068\ttatA\t\tGO:0043953\tPMID:17336443\tISS\t\tP\ttranslocation protein TatA\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5068\ttatA\t\tGO:0008320\tPMID:17336443\tISS\t\tF\ttranslocation protein TatA\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5068\ttatA\t\tGO:0033281\tPMID:11279240\tISS\t\tC\ttranslocation protein TatA\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5068\ttatA\t\tGO:0008320\tPMID:16621825\tIMP\t\tF\ttranslocation protein TatA\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5068\ttatA\t\tGO:0033281\tPMID:16621825\tIMP\t\tC\ttranslocation protein TatA\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5069\ttatB\t\tGO:0043953\tPMID:17336443\tISS\t\tP\ttranslocation protein TatB\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5069\ttatB\t\tGO:0008320\tPMID:17336443\tISS\t\tF\ttranslocation protein TatB\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5069\ttatB\t\tGO:0033281\tPMID:11279240\tISS\t\tC\ttranslocation protein TatB\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5069\ttatB\t\tGO:0008320\tPMID:16621825\tIMP\t\tF\ttranslocation protein TatB\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5069\ttatB\t\tGO:0033281\tPMID:16621825\tIMP\t\tC\ttranslocation protein TatB\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5070\ttatC\t\tGO:0043953\tPMID:17336443\tISS\t\tP\ttransport protein TatC\tyigU|mttB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5070\ttatC\t\tGO:0008320\tPMID:17336443\tISS\t\tF\ttransport protein TatC\tyigU|mttB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5070\ttatC\t\tGO:0033281\tPMID:11279240\tISS\t\tC\ttransport protein TatC\tyigU|mttB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5070\ttatC\t\tGO:0008320\tPMID:16621825\tIMP\t\tF\ttransport protein TatC\tyigU|mttB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5070\ttatC\t\tGO:0033281\tPMID:16621825\tIMP\t\tC\ttransport protein TatC\tyigU|mttB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5077\topgH\t\tGO:1900727\tPMID:17906125\tIGI\t\tP\tOpgH\tOpgH|opgH|mdoH|MdoH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5077\topgH\t\tGO:0044010\tPMID:17906125\tIGI\t\tP\tOpgH\tOpgH|opgH|mdoH|MdoH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5077\topgH\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tOpgH\tOpgH|opgH|mdoH|MdoH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5078\topgG\t\tGO:1900727\tPMID:17906125\tIGI\t\tP\tOpgG\tmdoG|OpgG|opgG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5078\topgG\t\tGO:0044010\tPMID:17906125\tIGI\t\tP\tOpgG\tmdoG|OpgG|opgG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5082\tdguC\t\tGO:0043190\tPMID:18310026\tISS\tPseudoCAP:PP_1071\tC\tDguC\tDguC|dguC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5082\tdguC\t\tGO:0051938\tPMID:18310026\tISO\tPseudoCAP:PP_1071\tP\tDguC\tDguC|dguC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5082\tdguC\t\tGO:0042940\tPMID:25082951\tIMP\t\tP\tDguC\tDguC|dguC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5084\tdguA\t\tGO:0008718\tPMID:17021207\tIDA\t\tF\tDguA\tDguA|dguA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5085\tdguR\t\tGO:0043565\tPMID:25082951\tIDA\t\tF\tDguR\tDguR|dguR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5089\ttle5b\t\tGO:0004630\tPMID:24832454\tIMP\t\tF\ttype VI secretion phospholipase D effector  Tle5b\tPldB|pldB|tle5b|type VI secretion phospholipase D effector  Tle5b\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5090\tvgrG5\t\tGO:0033103\tPMID:21325275\tIGC\t\tP\tVgrG5\tVgrG5|vgrG5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5090\tvgrG5\t\tGO:0033104\tPMID:21325275\tIGC\t\tC\tVgrG5\tVgrG5|vgrG5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5091\thutG\t\tGO:0050129\tPMID:3308850\tISS\t\tF\tN-formylglutamate amidohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5091\thutG\t\tGO:0006548\tPMID:4290562\tIMP\t\tP\tN-formylglutamate amidohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5091\thutG\t\tGO:0050129\tPMID:16475788\tIDA\t\tF\tN-formylglutamate amidohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5092\thutI\t\tGO:0050480\tPMID:4290562\tIMP\t\tF\timidazolone-5-propionate hydrolase HutI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5092\thutI\t\tGO:0006548\tPMID:4290562\tIMP\t\tP\timidazolone-5-propionate hydrolase HutI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5098\thutH\t\tGO:0004397\tPMID:4290562\tIMP\t\tF\thistidine ammonia-lyase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5098\thutH\t\tGO:0006548\tPMID:4290562\tIMP\t\tP\thistidine ammonia-lyase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5100\thutU\t\tGO:0016153\tPMID:4290562\tIMP\t\tF\turocanase\turocanate hydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5100\thutU\t\tGO:0006548\tPMID:4290562\tIMP\t\tP\turocanase\turocanate hydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5106\tPA5106\t\tGO:0006548\tPMID:4290562\tIMP\t\tP\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5106\tPA5106\t\tGO:0050416\tPMID:16475788\tIDA\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5110\tfbp\t\tGO:0042132\tPMID:16670087\tISS\t\tF\tfructose-1,6-bisphosphatase\tcfxF|cbbF|fbpase|hexosediphosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5110\tfbp\t\tGO:0006094\tPMID:16670087\tISS\t\tP\tfructose-1,6-bisphosphatase\tcfxF|cbbF|fbpase|hexosediphosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5110\tfbp\t\tGO:0016208\tPMID:16670087\tISS\t\tF\tfructose-1,6-bisphosphatase\tcfxF|cbbF|fbpase|hexosediphosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5111\tgloA3\t\tGO:0008270\tPMID:17513180\tIDA\t\tF\tlactoylglutathione lyase\tglo1|aldoketomutase, methylglyoxalase|glyoxalase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5111\tgloA3\t\tGO:0004462\tPMID:17513180\tIDA\t\tF\tlactoylglutathione lyase\tglo1|aldoketomutase, methylglyoxalase|glyoxalase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5111\tgloA3\t\tGO:0019243\tPMID:17513180\tIDA\t\tP\tlactoylglutathione lyase\tglo1|aldoketomutase, methylglyoxalase|glyoxalase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5112\testA\t\tGO:0052689\tPMID:17631636\tIMP\t\tF\testerase EstA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5112\testA\t\tGO:0009247\tPMID:17631636\tIMP\t\tP\testerase EstA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5112\testA\t\tGO:0071973\tPMID:17631636\tIMP\t\tP\testerase EstA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5112\testA\t\tGO:0044010\tPMID:17631636\tIMP\t\tP\testerase EstA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5112\testA\t\tGO:0071978\tPMID:20360178\tIDA\t\tP\testerase EstA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5117\ttypA\t\tGO:0043709\tPMID:23570569\tIMP\t\tP\tregulatory protein TypA\tbipA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5117\ttypA\t\tGO:0050714\tPMID:23570569\tIMP\t\tP\tregulatory protein TypA\tbipA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5117\ttypA\t\tGO:0030254\tPMID:23570569\tIMP\t\tP\tregulatory protein TypA\tbipA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5117\ttypA\t\tGO:0071236\tPMID:23570569\tIMP\t\tP\tregulatory protein TypA\tbipA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5117\ttypA\t\tGO:0071978\tPMID:17158671\tIMP\t\tP\tregulatory protein TypA\tbipA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5118\tthiI\t\tGO:0052837\tPMID:9209060\tIDA\t\tP\tthiazole biosynthesis protein ThiI\tyajK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5119\tglnA\t\tGO:0006542\tPMID:16262797\tISS\t\tP\tglutamine synthetase\tglutamate--ammonia ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5129\tgrxC\t\tGO:0009055\tPMID:7783\tISS\t\tF\tGrxC\tgrxC|grx|GrxC|glutaredoxin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5129\tgrxC\t\tGO:0045454\tPMID:7783\tISS\t\tP\tGrxC\tgrxC|grx|GrxC|glutaredoxin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5129\tgrxC\t\tGO:0015035\tPMID:7937896\tISS\t\tF\tGrxC\tgrxC|grx|GrxC|glutaredoxin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5132\tPA5132\t\tGO:0080120\tPMID:10747800\tISS\tUniProtKB:Q03530\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5132\tPA5132\t\tGO:0008237\tPMID:10747800\tISS\tUniProtKB:Q03530\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5134\tctpA\t\tGO:0009405\tPMID:24082078\tIMP\t\tP\tcarboxyl-terminal processing protease, CtpA\tctpA|carboxyl-terminal processing protease, CtpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5134\tctpA\t\tGO:0043163\tPMID:24082078\tIMP\t\tP\tcarboxyl-terminal processing protease, CtpA\tctpA|carboxyl-terminal processing protease, CtpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5134\tctpA\t\tGO:0030254\tPMID:24082078\tIMP\t\tP\tcarboxyl-terminal processing protease, CtpA\tctpA|carboxyl-terminal processing protease, CtpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5134\tctpA\t\tGO:0005886\tPMID:21204920\tIDA\t\tC\tcarboxyl-terminal processing protease, CtpA\tctpA|carboxyl-terminal processing protease, CtpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5134\tctpA\t\tGO:0030313\tPMID:21204920\tIDA\t\tC\tcarboxyl-terminal processing protease, CtpA\tctpA|carboxyl-terminal processing protease, CtpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5134\tctpA\t\tGO:0042597\tPMID:21204920\tIDA\t\tC\tcarboxyl-terminal processing protease, CtpA\tctpA|carboxyl-terminal processing protease, CtpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5134\tctpA\t\tGO:0042597\tPMID:24082078\tIDA\t\tC\tcarboxyl-terminal processing protease, CtpA\tctpA|carboxyl-terminal processing protease, CtpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5134\tctpA\t\tGO:0004252\tPMID:24928312\tISS\tUniProtKB:P23865\tF\tcarboxyl-terminal processing protease, CtpA\tctpA|carboxyl-terminal processing protease, CtpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5134\tctpA\t\tGO:0007165\tPMID:24928312\tIDA\t\tP\tcarboxyl-terminal processing protease, CtpA\tctpA|carboxyl-terminal processing protease, CtpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5134\tctpA\t\tGO:0042546\tPMID:24928312\tIDA\t\tP\tcarboxyl-terminal processing protease, CtpA\tctpA|carboxyl-terminal processing protease, CtpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5140\thisF1\t\tGO:0009382\tPMID:8494895\tISS\t\tC\timidazoleglycerol-phosphate synthase, cyclase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5140\thisF1\t\tGO:0000107\tPMID:8494895\tISS\t\tF\timidazoleglycerol-phosphate synthase, cyclase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5140\thisF1\t\tGO:0000105\tPMID:8494895\tISS\t\tP\timidazoleglycerol-phosphate synthase, cyclase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5142\thisH1\t\tGO:0009382\tPMID:8494895\tISS\t\tC\tglutamine amidotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5142\thisH1\t\tGO:0000107\tPMID:8494895\tISS\t\tF\tglutamine amidotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5142\thisH1\t\tGO:0000105\tPMID:8494895\tISS\t\tP\tglutamine amidotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5143\thisB\t\tGO:0004424\tPMID:24311587\tISS\t\tF\timidazoleglycerol-phosphate dehydratase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5143\thisB\t\tGO:0000105\tPMID:24311587\tISS\t\tP\timidazoleglycerol-phosphate dehydratase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5147\tmutY\t\tGO:0016787\tPMID:12445642\tIDA\t\tF\tA / G specific adenine glycosylase\tmicA|mutM|mutY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5147\tmutY\t\tGO:0006281\tPMID:12445642\tIDA\t\tP\tA / G specific adenine glycosylase\tmicA|mutM|mutY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5147\tmutY\t\tGO:0006281\tPMID:12445642\tIGI\t\tP\tA / G specific adenine glycosylase\tmicA|mutM|mutY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5147\tmutY\t\tGO:0016787\tPMID:12445642\tIGI\t\tF\tA / G specific adenine glycosylase\tmicA|mutM|mutY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5153\tPA5153\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\tamino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter periplasmic binding protein\tamino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter periplasmic binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5155\tPA5155\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\tamino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein\tamino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5162\trmlD\t\tGO:0019305\tPMID:10455186\tISS\t\tP\tdTDP-4-dehydrorhamnose reductase\trfbD|dTDP-6-deoxy-L-mannose dehydrogenase|dTDP-L-rhamnose synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5162\trmlD\t\tGO:0008831\tPMID:10455186\tISS\t\tF\tdTDP-4-dehydrorhamnose reductase\trfbD|dTDP-6-deoxy-L-mannose dehydrogenase|dTDP-L-rhamnose synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5162\trmlD\t\tGO:0009243\tPMID:9023210\tISS\t\tP\tdTDP-4-dehydrorhamnose reductase\trfbD|dTDP-6-deoxy-L-mannose dehydrogenase|dTDP-L-rhamnose synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5162\trmlD\t\tGO:0019305\tPMID:11065359\tISS\tUniProtKB:P37760\tP\tdTDP-4-dehydrorhamnose reductase\trfbD|dTDP-6-deoxy-L-mannose dehydrogenase|dTDP-L-rhamnose synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5162\trmlD\t\tGO:0009244\tPMID:11065359\tISS\tUniProtKB:P37760\tP\tdTDP-4-dehydrorhamnose reductase\trfbD|dTDP-6-deoxy-L-mannose dehydrogenase|dTDP-L-rhamnose synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5162\trmlD\t\tGO:0008831\tPMID:11065359\tISS\tUniProtKB:P37760\tF\tdTDP-4-dehydrorhamnose reductase\trfbD|dTDP-6-deoxy-L-mannose dehydrogenase|dTDP-L-rhamnose synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5163\trmlA\t\tGO:0019305\tPMID:10455186\tISS\t\tP\tglucose-1-phosphate thymidylyltransferase\trfbA|dTDP-glucose synthase|dTDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5163\trmlA\t\tGO:0008879\tPMID:7559340\tISS\t\tF\tglucose-1-phosphate thymidylyltransferase\trfbA|dTDP-glucose synthase|dTDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5163\trmlA\t\tGO:0009243\tPMID:9023210\tISS\t\tP\tglucose-1-phosphate thymidylyltransferase\trfbA|dTDP-glucose synthase|dTDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5163\trmlA\t\tGO:0019305\tPMID:11065359\tISS\tUniProtKB:P37744\tP\tglucose-1-phosphate thymidylyltransferase\trfbA|dTDP-glucose synthase|dTDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5163\trmlA\t\tGO:0009244\tPMID:11065359\tISS\tUniProtKB:P37744\tP\tglucose-1-phosphate thymidylyltransferase\trfbA|dTDP-glucose synthase|dTDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5163\trmlA\t\tGO:0008879\tPMID:11065359\tISS\tUniProtKB:P37744\tF\tglucose-1-phosphate thymidylyltransferase\trfbA|dTDP-glucose synthase|dTDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5164\trmlC\t\tGO:0019305\tPMID:10455186\tISS\t\tP\tdTDP-4-dehydrorhamnose 3,5-epimerase\trfbC|dTDP-L-rhamnose synthetase|dTDP-4-keto-6-deoxyglucose 3,5-epimerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5164\trmlC\t\tGO:0008830\tPMID:10455186\tISS\t\tF\tdTDP-4-dehydrorhamnose 3,5-epimerase\trfbC|dTDP-L-rhamnose synthetase|dTDP-4-keto-6-deoxyglucose 3,5-epimerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5164\trmlC\t\tGO:0009243\tPMID:9023210\tISS\t\tP\tdTDP-4-dehydrorhamnose 3,5-epimerase\trfbC|dTDP-L-rhamnose synthetase|dTDP-4-keto-6-deoxyglucose 3,5-epimerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5164\trmlC\t\tGO:0009244\tPMID:11065359\tIDA\t\tP\tdTDP-4-dehydrorhamnose 3,5-epimerase\trfbC|dTDP-L-rhamnose synthetase|dTDP-4-keto-6-deoxyglucose 3,5-epimerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5164\trmlC\t\tGO:0008830\tPMID:17046787\tEXP\t\tF\tdTDP-4-dehydrorhamnose 3,5-epimerase\trfbC|dTDP-L-rhamnose synthetase|dTDP-4-keto-6-deoxyglucose 3,5-epimerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5164\trmlC\t\tGO:0019305\tPMID:17046787\tIDA\t\tP\tdTDP-4-dehydrorhamnose 3,5-epimerase\trfbC|dTDP-L-rhamnose synthetase|dTDP-4-keto-6-deoxyglucose 3,5-epimerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5165\tdctB\t\tGO:0032892\tPMID:21725012\tIMP\t\tP\tDctB\tDctB|dctB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5165\tdctB\t\tGO:0000155\tPMID:21725012\tISS\t\tF\tDctB\tDctB|dctB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5166\tdctD\t\tGO:0032892\tPMID:21725012\tIMP\t\tP\tDctD\tDctD|dctD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5166\tdctD\t\tGO:0000156\tPMID:21725012\tISS\t\tF\tDctD\tDctD|dctD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5167\tdctP\t\tGO:0015740\tPMID:21725012\tIMP\t\tP\tDctP\tDctP|dctP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5168\tdctQ\t\tGO:0015740\tPMID:21725012\tIMP\t\tP\tDctQ\tDctQ|dctQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5169\tdctM\t\tGO:0015740\tPMID:21725012\tIMP\t\tP\tDctM\tDctM|dctM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5170\tarcD\t\tGO:0043858\tPMID:1311296\tIMP\t\tF\targinine/ornithine antiporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5170\tarcD\t\tGO:0019546\tPMID:1311296\tIMP\t\tP\targinine/ornithine antiporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5171\tarcA\t\tGO:0019546\tPMID:6438064\tIMP\t\tP\targinine deiminase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5171\tarcA\t\tGO:0016990\tPMID:6438064\tIMP\t\tF\targinine deiminase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5172\tarcB\t\tGO:0019546\tPMID:6438064\tIMP\t\tP\tornithine carbamoyltransferase, catabolic\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5172\tarcB\t\tGO:0004585\tPMID:6438064\tIMP\t\tF\tornithine carbamoyltransferase, catabolic\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5173\tarcC\t\tGO:0019546\tPMID:6438064\tIMP\t\tP\tcarbamate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5173\tarcC\t\tGO:0008804\tPMID:6438064\tIMP\t\tF\tcarbamate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5175\tcysQ\t\tGO:0000103\tPMID:1729235\tISS\t\tP\t3,5-bisphosphate nucleotidase CysQ\t3,5-bisphosphate nucleotidase CysQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5175\tcysQ\t\tGO:0019344\tPMID:1729235\tISS\t\tP\t3,5-bisphosphate nucleotidase CysQ\t3,5-bisphosphate nucleotidase CysQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5175\tcysQ\t\tGO:0008441\tPMID:18454554\tISS\t\tF\t3,5-bisphosphate nucleotidase CysQ\t3,5-bisphosphate nucleotidase CysQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5190\tPA5190\t\tGO:0003955\tPMID:25085734\tIMP\t\tF\tNAD(P)H quinone oxidoreductase\tNAD(P)H quinone oxidoreductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5192\tpckA\t\tGO:0004611\tPMID:6986370\tISS\t\tF\tphosphoenolpyruvate carboxykinase\tPEPCK|PEP carboxykinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5192\tpckA\t\tGO:0006094\tPMID:6986370\tISS\t\tP\tphosphoenolpyruvate carboxykinase\tPEPCK|PEP carboxykinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5192\tpckA\t\tGO:0000287\tPMID:8448184\tISS\t\tF\tphosphoenolpyruvate carboxykinase\tPEPCK|PEP carboxykinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5199\tamgS\t\tGO:0000155\tPMID:19706543\tISS\t\tF\tAmgS\tamgS|AmgS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5199\tamgS\t\tGO:0000160\tPMID:19706543\tISS\t\tP\tAmgS\tamgS|AmgS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5200\tamgR\t\tGO:0000156\tPMID:19706543\tISS\t\tF\tAmgR\tamgR|AmgR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5200\tamgR\t\tGO:0045862\tPMID:19706543\tIMP\t\tP\tAmgR\tamgR|AmgR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5200\tamgR\t\tGO:0051050\tPMID:19706543\tIMP\t\tP\tAmgR\tamgR|AmgR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5203\tgshA\t\tGO:0004357\tPMID:2895925\tISS\t\tF\tglutamate--cysteine ligase\tgamma-glutamylcysteine synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5203\tgshA\t\tGO:0006750\tPMID:2895925\tISS\t\tP\tglutamate--cysteine ligase\tgamma-glutamylcysteine synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5204\targA\t\tGO:0006526\tPMID:22447897\tIMP\t\tP\tN-acetylglutamate synthase\tamino-acid acetyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5204\targA\t\tGO:0004358\tPMID:22447897\tIMP\t\tF\tN-acetylglutamate synthase\tamino-acid acetyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5208\tPA5208\t\tGO:0071978\tPMID:17158671\tIMP\t\tP\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5208\tPA5208\t\tGO:0044010\tPMID:17158671\tIMP\t\tP\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5213\tgcvP1\t\tGO:0019464\tPMID:3023185\tISS\t\tP\tglycine cleavage system protein P1\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5214\tgcvH1\t\tGO:0019464\tPMID:3023185\tISS\t\tP\tglycine cleavage system protein H1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5215\tgcvT1\t\tGO:0019464\tPMID:3023185\tISS\t\tP\tglycine-cleavage system protein T1\tglycine-cleavage system protein T, tetrahydrofolate aminomethyltransferase|aminomethyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5224\tpepP\t\tGO:0009405\tPMID:22911607\tIMP\t\tP\taminopeptidase P\tproline aminopeptidase|X-Pro aminopeptidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5235\tglpT\t\tGO:0042895\tPMID:19734311\tIMP\t\tF\tglycerol-3-phosphate transporter\tglycerol-3-phosphate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5235\tglpT\t\tGO:0042891\tPMID:19734311\tIMP\t\tP\tglycerol-3-phosphate transporter\tglycerol-3-phosphate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5235\tglpT\t\tGO:0015794\tPMID:3522583\tISS\t\tP\tglycerol-3-phosphate transporter\tglycerol-3-phosphate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5239\trho\t\tGO:0005524\tPMID:2461932\tISS\t\tF\ttranscription termination factor Rho\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5239\trho\t\tGO:0008186\tPMID:1098042\tISS\t\tF\ttranscription termination factor Rho\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5239\trho\t\tGO:0006353\tPMID:7509071\tISS\t\tP\ttranscription termination factor Rho\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5240\ttrxA\t\tGO:0045454\tPMID:9188456\tISS\t\tP\tthioredoxin\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5240\ttrxA\t\tGO:0015035\tPMID:10464247\tISS\t\tF\tthioredoxin\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5241\tppx\t\tGO:0004309\tPMID:10382967\tIDA\t\tF\texopolyphosphatase\tgppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5241\tppx\t\tGO:0009405\tPMID:24275100\tIMP\t\tP\texopolyphosphatase\tgppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5241\tppx\t\tGO:0006995\tPMID:24275100\tIDA\t\tP\texopolyphosphatase\tgppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5241\tppx\t\tGO:0016036\tPMID:24275100\tIDA\t\tP\texopolyphosphatase\tgppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5241\tppx\t\tGO:0044010\tPMID:24275100\tIMP\t\tP\texopolyphosphatase\tgppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5241\tppx\t\tGO:0071978\tPMID:24275100\tIDA\t\tP\texopolyphosphatase\tgppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5241\tppx\t\tGO:0071977\tPMID:24275100\tIMP\t\tP\texopolyphosphatase\tgppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5241\tppx\t\tGO:0009247\tPMID:24275100\tIMP\t\tP\texopolyphosphatase\tgppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5241\tppx\t\tGO:0009372\tPMID:24275100\tIMP\t\tP\texopolyphosphatase\tgppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5243\themB\t\tGO:0006779\tPMID:9529530\tIMP\t\tP\tdelta-aminolevulinic acid dehydratase\tporphobilinogen synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5243\themB\t\tGO:0004655\tPMID:9529530\tIMP\t\tF\tdelta-aminolevulinic acid dehydratase\tporphobilinogen synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5253\talgP\t\tGO:1900190\tPMID:1698761\tNAS\t\tP\talginate regulatory protein AlgP\talgR3|transcription regulator AlgR3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5253\talgP\t\tGO:0006355\tPMID:1698761\tIMP\t\tP\talginate regulatory protein AlgP\talgR3|transcription regulator AlgR3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5253\talgP\t\tGO:0042121\tPMID:1698761\tIMP\t\tP\talginate regulatory protein AlgP\talgR3|transcription regulator AlgR3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5255\talgQ\t\tGO:1900378\tPMID:16030202\tIMP\t\tP\tAlginate regulatory protein AlgQ\talgR2|transcriptional regulatory protein AlgR2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5255\talgQ\t\tGO:0045861\tPMID:12706510\tIMP\t\tP\tAlginate regulatory protein AlgQ\talgR2|transcriptional regulatory protein AlgR2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5255\talgQ\t\tGO:1900192\tPMID:2544550\tIMP\t\tP\tAlginate regulatory protein AlgQ\talgR2|transcriptional regulatory protein AlgR2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5255\talgQ\t\tGO:0006355\tPMID:12706510\tIMP\t\tP\tAlginate regulatory protein AlgQ\talgR2|transcriptional regulatory protein AlgR2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5256\tdsbH\t\tGO:0055114\tPMID:24327342\tIMP\t\tP\tdisulfide bond formation protein\tdsbB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5256\tdsbH\t\tGO:0006457\tPMID:24327342\tIMP\t\tP\tdisulfide bond formation protein\tdsbB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5259\themD\t\tGO:0004852\tPMID:2557837\tISS\tUniProtKB:P09126\tF\turoporphyrinogen-III synthetase\thydroxymethylbilane hydrolyase (cyclizing)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5259\themD\t\tGO:0006779\tPMID:2557837\tISS\t\tP\turoporphyrinogen-III synthetase\thydroxymethylbilane hydrolyase (cyclizing)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5261\talgR\t\tGO:2000147\tPMID:12379685\tIMP\t\tP\talginate biosynthesis regulatory protein AlgR\tAlgR1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5261\talgR\t\tGO:1901031\tPMID:12379685\tIMP\t\tP\talginate biosynthesis regulatory protein AlgR\tAlgR1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5261\talgR\t\tGO:1900192\tPMID:3108855\tIMP\t\tP\talginate biosynthesis regulatory protein AlgR\tAlgR1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5261\talgR\t\tGO:0071978\tPMID:17158671\tIMP\t\tP\talginate biosynthesis regulatory protein AlgR\tAlgR1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5261\talgR\t\tGO:0043107\tPMID:17158671\tIMP\t\tP\talginate biosynthesis regulatory protein AlgR\tAlgR1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5262\tfimS\t\tGO:0000160\tPMID:8790418\tIDA\t\tP\tFimS\tfimS|FimS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5262\tfimS\t\tGO:0000155\tPMID:8790418\tISS\t\tF\tFimS\tfimS|FimS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5262\tfimS\t\tGO:2000147\tPMID:8790418\tIMP\t\tP\tFimS\tfimS|FimS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5266\tvgrG6\t\tGO:0033103\tPMID:21325275\tIGC\t\tP\tVgrG6\tVgrG6|vgrG6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5266\tvgrG6\t\tGO:0033104\tPMID:21325275\tIGC\t\tC\tVgrG6\tVgrG6|vgrG6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5268\tcorA\t\tGO:0015693\tPMID:8314774\tISS\tUniProtKB:P0ABI4\tP\tmagnesium/cobalt transport protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5272\tcyaA\t\tGO:0004016\tPMID:12586068\tIMP\t\tF\tadenylate cyclase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5272\tcyaA\t\tGO:0006171\tPMID:12586068\tIMP\t\tP\tadenylate cyclase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5272\tcyaA\t\tGO:0009405\tPMID:14977975\tIMP\t\tP\tadenylate cyclase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5274\trnk\t\tGO:1900192\tPMID:7565093\tISS\t\tP\tnucleoside diphosphate kinase regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5274\trnk\t\tGO:0033674\tPMID:7565093\tISS\t\tP\tnucleoside diphosphate kinase regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5277\tlysA\t\tGO:0008836\tPMID:3018430\tIMP\t\tF\tdiaminopimelate decarboxylase\tDAP decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5278\tdapF\t\tGO:0008837\tPMID:2689171\tISS\tUniProtKB:P0A6K1\tF\tdiaminopimelate epimerase\tDAP epimerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5280\tsss\t\tGO:0071294\tPMID:7715441\tIMP\t\tP\tsite-specific recombinase Sss\txerC|site-specific recombinase XerC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5280\tsss\t\tGO:0009009\tPMID:7715441\tIGI\t\tF\tsite-specific recombinase Sss\txerC|site-specific recombinase XerC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5280\tsss\t\tGO:0015074\tPMID:7715441\tIGI\t\tP\tsite-specific recombinase Sss\txerC|site-specific recombinase XerC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5288\tglnK\t\tGO:0071236\tPMID:20679510\tIMP\t\tP\tnitrogen regulatory protein P-II 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5288\tglnK\t\tGO:0043562\tPMID:8843440\tISS\t\tP\tnitrogen regulatory protein P-II 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5288\tglnK\t\tGO:0006808\tPMID:9720863\tISS\t\tP\tnitrogen regulatory protein P-II 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5291\tbetT2\t\tGO:0005275\tPMID:18156257\tIDA\t\tF\tBetT2\tbetT2|BetT2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5291\tbetT2\t\tGO:0071475\tPMID:18156257\tIDA\t\tP\tBetT2\tbetT2|BetT2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5291\tbetT2\t\tGO:0015653\tPMID:18156257\tIDA\t\tF\tBetT2\tbetT2|BetT2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5291\tbetT2\t\tGO:0031460\tPMID:18156257\tIDA\t\tP\tBetT2\tbetT2|BetT2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5291\tbetT2\t\tGO:0016021\tPMID:18156257\tIDA\t\tC\tBetT2\tbetT2|BetT2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5294\tPA5294\t\tGO:0015238\tPMID:14679249\tISS\tUniProtKB:O82855\tF\tputative multidrug efflux pump\tputative multidrug efflux pump|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5294\tPA5294\t\tGO:0015307\tPMID:14679249\tISS\tUniProtKB:O82855\tF\tputative multidrug efflux pump\tputative multidrug efflux pump|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5294\tPA5294\t\tGO:0005886\tPMID:14679249\tISS\tUniProtKB:O82855\tC\tputative multidrug efflux pump\tputative multidrug efflux pump|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5294\tPA5294\t\tGO:0098567\tPMID:14679249\tISS\tUniProtKB:O82855\tC\tputative multidrug efflux pump\tputative multidrug efflux pump|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5296\trep\t\tGO:0004003\tPMID:383240\tISS\t\tF\tATP-dependent DNA helicase Rep\tRep helicase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5301\tpauR\t\tGO:0043565\tPMID:23794626\tIDA\t\tF\tPauR\tycjC|pauR|PauR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5301\tpauR\t\tGO:0019810\tPMID:23794626\tIDA\t\tF\tPauR\tycjC|pauR|PauR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5302\tdadX\t\tGO:0008784\tPMID:10977898\tIDA\t\tF\tcatabolic alanine racemase\talr2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5304\tdadA\t\tGO:0008718\tPMID:21378189\tIDA\t\tF\tD-amino acid dehydrogenase, small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5308\tlrp\t\tGO:0006524\tPMID:19666712\tIMP\t\tP\tleucine-responsive regulatory protein\tdadR, dadAX regulator|Lrp protein|transcriptional activator of dadAX DadR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5308\tlrp\t\tGO:0006355\tPMID:10216857\tISS\t\tP\tleucine-responsive regulatory protein\tdadR, dadAX regulator|Lrp protein|transcriptional activator of dadAX DadR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5308\tlrp\t\tGO:0003700\tPMID:10216857\tISS\t\tF\tleucine-responsive regulatory protein\tdadR, dadAX regulator|Lrp protein|transcriptional activator of dadAX DadR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5312\tpauC\t\tGO:0004030\tPMID:18668238\tISS\t\tF\tAldehyde dehydrogenase\tkauB|Aldehyde dehydrogenase|pauC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5312\tpauC\t\tGO:0006598\tPMID:18668238\tISS\t\tP\tAldehyde dehydrogenase\tkauB|Aldehyde dehydrogenase|pauC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5315\trpmG\t\tGO:0006412\tPMID:9044258\tISS\t\tP\t50S ribosomal protein L33\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5315\trpmG\t\tGO:0015934\tPMID:786732\tISS\t\tC\t50S ribosomal protein L33\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5316\trpmB\t\tGO:0006412\tPMID:9044258\tISS\t\tP\t50S ribosomal protein L28\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5316\trpmB\t\tGO:0015934\tPMID:332524\tISS\t\tC\t50S ribosomal protein L28\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5317\tdppA5\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tprobable binding protein component of ABC dipeptide transporter\tdppA5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5317\tdppA5\t\tGO:0042938\tPMID:25338022\tISS\tPseudoCAP:PA14_70200\tP\tprobable binding protein component of ABC dipeptide transporter\tdppA5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5317\tdppA5\t\tGO:0042277\tPMID:25338022\tISS\tPseudoCAP:PA14_70200\tF\tprobable binding protein component of ABC dipeptide transporter\tdppA5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5320\tcoaC\t\tGO:0015937\tPMID:11278255\tISS\tUniProtKB:G0HKG0\tP\tPhosphopantothenoylcysteine synthase/(R)-4'-phospho-N-pantothenoylcysteine decarboxylase\tcoaB|coaBC|dfp|CoaBC protein|Dfp protein|coaC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5320\tcoaC\t\tGO:0004632\tPMID:11278255\tISS\tUniProtKB:P0ABQ0\tF\tPhosphopantothenoylcysteine synthase/(R)-4'-phospho-N-pantothenoylcysteine decarboxylase\tcoaB|coaBC|dfp|CoaBC protein|Dfp protein|coaC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5320\tcoaC\t\tGO:0004633\tPMID:11278255\tISS\tUniProtKB:P0ABQ0\tF\tPhosphopantothenoylcysteine synthase/(R)-4'-phospho-N-pantothenoylcysteine decarboxylase\tcoaB|coaBC|dfp|CoaBC protein|Dfp protein|coaC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5321\tdut\t\tGO:0004170\tPMID:346589\tISS\tUniProtKB:P06968\tF\tdeoxyuridine 5'-triphosphate nucleotidohydrolase\tdUTPase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5321\tdut\t\tGO:0005829\tPMID:16858726\tISS\tUniProtKB:P06968\tC\tdeoxyuridine 5'-triphosphate nucleotidohydrolase\tdUTPase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5321\tdut\t\tGO:0046081\tPMID:346589\tISS\tUniProtKB:P06968\tP\tdeoxyuridine 5'-triphosphate nucleotidohydrolase\tdUTPase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5322\talgC\t\tGO:0009405\tPMID:7558335\tIMP\t\tP\tphosphomannomutase AlgC\tpmm\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5322\talgC\t\tGO:0004614\tPMID:7515870\tIMP\t\tF\tphosphomannomutase AlgC\tpmm\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5322\talgC\t\tGO:0009244\tPMID:7515870\tIMP\t\tP\tphosphomannomutase AlgC\tpmm\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5322\talgC\t\tGO:0004615\tPMID:1903398\tIMP\t\tF\tphosphomannomutase AlgC\tpmm\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5322\talgC\t\tGO:0042121\tPMID:1903398\tIMP\t\tP\tphosphomannomutase AlgC\tpmm\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5322\talgC\t\tGO:0004615\tPMID:22513190\tIMP\t\tF\tphosphomannomutase AlgC\tpmm\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5322\talgC\t\tGO:0042121\tPMID:22513190\tIMP\t\tP\tphosphomannomutase AlgC\tpmm\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5322\talgC\t\tGO:0009243\tPMID:22513190\tIMP\t\tP\tphosphomannomutase AlgC\tpmm\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5324\tsphR\t\tGO:0045893\tPMID:24465209\tIMP\t\tP\tSphingosine-responsive Regulator, SphR\tSphingosine-responsive Regulator, SphR|sphR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5324\tsphR\t\tGO:0046625\tPMID:24465209\tIDA\t\tF\tSphingosine-responsive Regulator, SphR\tSphingosine-responsive Regulator, SphR|sphR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5324\tsphR\t\tGO:0044212\tPMID:24465209\tIDA\t\tF\tSphingosine-responsive Regulator, SphR\tSphingosine-responsive Regulator, SphR|sphR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5324\tsphR\t\tGO:0051872\tPMID:24465209\tIDA\t\tP\tSphingosine-responsive Regulator, SphR\tSphingosine-responsive Regulator, SphR|sphR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5325\tsphA\t\tGO:0009405\tPMID:24465209\tIMP\t\tP\tSphA\tSphA|sphA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5325\tsphA\t\tGO:0071396\tPMID:24465209\tIMP\t\tP\tSphA\tSphA|sphA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5325\tsphA\t\tGO:0051872\tPMID:24465209\tIDA\t\tP\tSphA\tSphA|sphA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5326\tsphD\t\tGO:0051872\tPMID:24465209\tIMP\t\tP\tSphD\tSphD|sphD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5327\tsphC\t\tGO:0051872\tPMID:24465209\tIDA\t\tP\tSphC\tSphC|sphC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5328\tsphB\t\tGO:0051872\tPMID:24465209\tIDA\t\tP\tSphB\tSphB|sphB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5331\tpyrE\t\tGO:0004588\tPMID:9222315\tISS\tUniProtKB:P0A7E3\tF\torotate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5331\tpyrE\t\tGO:0006221\tPMID:8501045\tISS\t\tP\torotate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5331\tpyrE\t\tGO:0006221\tPMID:25917504\tIMP\t\tP\torotate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5331\tpyrE\t\tGO:0004588\tPMID:25917504\tIMP\t\tF\torotate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5332\tcrc\t\tGO:0043609\tPMID:1906870\tIMP\t\tP\tcatabolite repression control protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5332\tcrc\t\tGO:0009405\tPMID:20626455\tIMP\t\tP\tcatabolite repression control protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5332\tcrc\t\tGO:0009372\tPMID:20626455\tIMP\t\tP\tcatabolite repression control protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5332\tcrc\t\tGO:1900190\tPMID:10629189\tIMP\t\tP\tcatabolite repression control protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5334\trph\t\tGO:0009022\tPMID:2455297\tISS\t\tF\tribonuclease PH\ttRNA nucleotidyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5334\trph\t\tGO:0042780\tPMID:2455297\tISS\t\tP\tribonuclease PH\ttRNA nucleotidyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5344\toxyR\t\tGO:2000147\tPMID:19926657\tIMP\t\tP\tOxyR\toxyR|OxyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5344\toxyR\t\tGO:1900377\tPMID:19926657\tIMP\t\tP\tOxyR\toxyR|OxyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5344\toxyR\t\tGO:0046889\tPMID:19926657\tIMP\t\tP\tOxyR\toxyR|OxyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5344\toxyR\t\tGO:1901671\tPMID:19926657\tIMP\t\tP\tOxyR\toxyR|OxyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5344\toxyR\t\tGO:0044212\tPMID:19933365\tIDA\t\tF\tOxyR\toxyR|OxyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5344\toxyR\t\tGO:1901031\tPMID:19933365\tIMP\t\tP\tOxyR\toxyR|OxyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5345\trecG\t\tGO:0034599\tPMID:10913087\tIMP\t\tP\tATP-dependent DNA helicase RecG\tRecG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5345\trecG\t\tGO:0006281\tPMID:10913087\tIMP\t\tP\tATP-dependent DNA helicase RecG\tRecG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5345\trecG\t\tGO:0034644\tPMID:10913087\tIMP\t\tP\tATP-dependent DNA helicase RecG\tRecG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5345\trecG\t\tGO:0071247\tPMID:16105671\tIMP\t\tP\tATP-dependent DNA helicase RecG\tRecG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5345\trecG\t\tGO:0006281\tPMID:16105671\tIMP\t\tP\tATP-dependent DNA helicase RecG\tRecG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5345\trecG\t\tGO:0072715\tPMID:16105671\tIMP\t\tP\tATP-dependent DNA helicase RecG\tRecG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5345\trecG\t\tGO:0003678\tPMID:22621928\tIDA\t\tF\tATP-dependent DNA helicase RecG\tRecG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5345\trecG\t\tGO:0009378\tPMID:22621928\tIDA\t\tF\tATP-dependent DNA helicase RecG\tRecG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5345\trecG\t\tGO:0044212\tPMID:22621928\tIDA\t\tF\tATP-dependent DNA helicase RecG\tRecG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5346\tsadB\t\tGO:0044010\tPMID:15231779\tIMP\t\tP\tSadB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5349\trubB\t\tGO:0043448\tPMID:14574114\tIGI\t\tP\trubredoxin reductase\trubredoxin reductase|rubB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5349\trubB\t\tGO:0015045\tPMID:14574114\tIGI\t\tF\trubredoxin reductase\trubredoxin reductase|rubB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5350\trubA2\t\tGO:0043448\tPMID:14574114\tIGI\t\tP\tRubredoxin 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5350\trubA2\t\tGO:0009055\tPMID:14574114\tIGI\t\tF\tRubredoxin 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5351\trubA1\t\tGO:0043448\tPMID:14574114\tIGI\t\tP\tRubredoxin 1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5351\trubA1\t\tGO:0009055\tPMID:14574114\tIGI\t\tF\tRubredoxin 1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5359\tPA5359\t\tGO:0043448\tPMID:14574114\tIMP\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5360\tphoB\t\tGO:0000156\tPMID:11703664\tISS\t\tF\ttwo-component response regulator PhoB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5360\tphoB\t\tGO:0080040\tPMID:23657684\tIMP\t\tP\ttwo-component response regulator PhoB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5360\tphoB\t\tGO:0071978\tPMID:24023943\tIMP\t\tP\ttwo-component response regulator PhoB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5361\tphoR\t\tGO:0000155\tPMID:11703664\tISS\t\tF\ttwo-component sensor PhoR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5361\tphoR\t\tGO:1900231\tPMID:11703664\tISS\t\tP\ttwo-component sensor PhoR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5365\tphoU\t\tGO:0050922\tPMID:8083184\tIMP\t\tP\tphosphate uptake regulatory protein PhoU\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5365\tphoU\t\tGO:0050928\tPMID:8083184\tIMP\t\tP\tphosphate uptake regulatory protein PhoU\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5369\tpstS\t\tGO:0042301\tPMID:25223609\tIMP\t\tF\tphosphate ABC transporter, periplasmic phosphate-binding protein, PstS\tpstS|phosphate ABC transporter, periplasmic phosphate-binding protein, PstS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5369\tpstS\t\tGO:0044010\tPMID:25223609\tIMP\t\tP\tphosphate ABC transporter, periplasmic phosphate-binding protein, PstS\tpstS|phosphate ABC transporter, periplasmic phosphate-binding protein, PstS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5375\tbetT1\t\tGO:0005275\tPMID:21478341\tIDA\t\tF\tBetT1\tBetT1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5375\tbetT1\t\tGO:0033265\tPMID:21478341\tIDA\t\tF\tBetT1\tBetT1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5375\tbetT1\t\tGO:0042426\tPMID:21478341\tIDA\t\tP\tBetT1\tBetT1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5375\tbetT1\t\tGO:0016021\tPMID:21478341\tIDA\t\tC\tBetT1\tBetT1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5375\tbetT1\t\tGO:0042426\tPMID:18156257\tISO\tPseudoCAP:PSPTO_5269\tP\tBetT1\tBetT1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5375\tbetT1\t\tGO:0031459\tPMID:18156257\tISO\tPseudoCAP:PSPTO_5269\tF\tBetT1\tBetT1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0015871\tPMID:19919675\tIMP\t\tP\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0031459\tPMID:19919675\tIDA\t\tF\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0015418\tPMID:19919675\tIDA\t\tF\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0015226\tPMID:19919675\tIDA\t\tF\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0031457\tPMID:19919675\tIDA\t\tP\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0005275\tPMID:19919675\tIDA\t\tF\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0015838\tPMID:19919675\tIDA\t\tP\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0033266\tPMID:19919675\tIDA\t\tF\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0015419\tPMID:23763788\tIDA\t\tF\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0042426\tPMID:19919675\tIDA\t\tP\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0031460\tPMID:19919675\tIDA\t\tP\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:1901682\tPMID:23763788\tIDA\t\tF\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0043190\tPMID:19919675\tIDA\t\tC\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0042426\tPMID:21478341\tIDA\t\tP\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:0031460\tPMID:21478341\tIDA\t\tP\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5376\tcbcV\t\tGO:1902603\tPMID:21478341\tIDA\t\tP\tCbcV\tCbcV|cbcV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:0015871\tPMID:19919675\tIMP\t\tP\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:0005275\tPMID:19919675\tIDA\t\tF\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:0015226\tPMID:19919675\tIDA\t\tF\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:0031457\tPMID:19919675\tIDA\t\tP\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:0015838\tPMID:19919675\tIDA\t\tP\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:0042426\tPMID:19919675\tIDA\t\tP\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:0031460\tPMID:19919675\tIDA\t\tP\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:1901682\tPMID:23763788\tIDA\t\tF\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:1902495\tPMID:19919675\tIDA\t\tC\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:0043190\tPMID:19919675\tIDA\t\tC\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:0042426\tPMID:21478341\tIDA\t\tP\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:0031460\tPMID:21478341\tIDA\t\tP\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5377\tcbcW\t\tGO:1902603\tPMID:21478341\tIDA\t\tP\tCbcW\tCbcW|cbcW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5378\tcbcX\t\tGO:0015871\tPMID:19919675\tIMP\t\tP\tCbcX\tCbcX|cbcX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5378\tcbcX\t\tGO:0033265\tPMID:19919675\tIDA\t\tF\tCbcX\tCbcX|cbcX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5378\tcbcX\t\tGO:0005275\tPMID:19919675\tIDA\t\tF\tCbcX\tCbcX|cbcX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5378\tcbcX\t\tGO:0031457\tPMID:19919675\tIDA\t\tP\tCbcX\tCbcX|cbcX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5378\tcbcX\t\tGO:0015838\tPMID:19919675\tIDA\t\tP\tCbcX\tCbcX|cbcX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5378\tcbcX\t\tGO:0042426\tPMID:19919675\tIDA\t\tP\tCbcX\tCbcX|cbcX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5378\tcbcX\t\tGO:0031460\tPMID:19919675\tIDA\t\tP\tCbcX\tCbcX|cbcX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5378\tcbcX\t\tGO:0043190\tPMID:19919675\tIDA\t\tC\tCbcX\tCbcX|cbcX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5378\tcbcX\t\tGO:0042426\tPMID:21478341\tIDA\t\tP\tCbcX\tCbcX|cbcX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5378\tcbcX\t\tGO:0031460\tPMID:21478341\tIDA\t\tP\tCbcX\tCbcX|cbcX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5378\tcbcX\t\tGO:1902603\tPMID:21478341\tIDA\t\tP\tCbcX\tCbcX|cbcX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5379\tsdaB\t\tGO:0003941\tPMID:15155761\tISS\t\tF\tL-serine dehydratase\tL-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5379\tsdaB\t\tGO:0006565\tPMID:15155761\tISS\t\tP\tL-serine dehydratase\tL-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5379\tsdaB\t\tGO:0031459\tPMID:24097953\tIDA\t\tF\tL-serine dehydratase\tL-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5380\tgbdR\t\tGO:0045764\tPMID:17951379\tIMP\t\tP\tGbdR\tgbdR|GbdR|glycine betaine- and dimethylglycine-responsive regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5380\tgbdR\t\tGO:0010518\tPMID:19103776\tIMP\t\tP\tGbdR\tgbdR|GbdR|glycine betaine- and dimethylglycine-responsive regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5380\tgbdR\t\tGO:0010922\tPMID:19103776\tIMP\t\tP\tGbdR\tgbdR|GbdR|glycine betaine- and dimethylglycine-responsive regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5380\tgbdR\t\tGO:0006355\tPMID:24097953\tIMP\t\tP\tGbdR\tgbdR|GbdR|glycine betaine- and dimethylglycine-responsive regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5380\tgbdR\t\tGO:0006355\tPMID:17951379\tIDA\t\tP\tGbdR\tgbdR|GbdR|glycine betaine- and dimethylglycine-responsive regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5380\tgbdR\t\tGO:0031457\tPMID:17951379\tIMP\t\tP\tGbdR\tgbdR|GbdR|glycine betaine- and dimethylglycine-responsive regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5380\tgbdR\t\tGO:0010922\tPMID:19103776\tIMP\t\tP\tGbdR\tgbdR|GbdR|glycine betaine- and dimethylglycine-responsive regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5380\tgbdR\t\tGO:0045764\tPMID:17951379\tIMP\t\tP\tGbdR\tgbdR|GbdR|glycine betaine- and dimethylglycine-responsive regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5380\tgbdR\t\tGO:0009896\tPMID:17951379\tIMP\t\tP\tGbdR\tgbdR|GbdR|glycine betaine- and dimethylglycine-responsive regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5384\thocS\t\tGO:0047619\tPMID:23524670\tIDA\t\tF\tHocS\thydrolysis of O-acylcarnitine, short chain|hocS|HocS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5385\tcdhB\t\tGO:0042413\tPMID:19406895\tIMP\t\tP\tCdhB, Carnitine dehydrogenase-related gene B\tcdhB|CdhB, Carnitine dehydrogenase-related gene B\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5386\tcdhA\t\tGO:0042413\tPMID:19406895\tIMP\t\tP\tCdhA, Carnitine dehydrogenase\tcdhA|CdhA, Carnitine dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5387\tcdhC\t\tGO:0042413\tPMID:19406895\tIMP\t\tP\tCdhC, Carnitine dehydrogenase-related gene C\tcdhC|CdhC, Carnitine dehydrogenase-related gene C\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5388\tcaiX\t\tGO:0042413\tPMID:19406895\tIMP\t\tP\tCaiX\tCaiX|caiX|carnitine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5388\tcaiX\t\tGO:0015879\tPMID:19919675\tIMP\t\tP\tCaiX\tCaiX|caiX|carnitine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5388\tcaiX\t\tGO:0015418\tPMID:19919675\tIDA\t\tF\tCaiX\tCaiX|caiX|carnitine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5388\tcaiX\t\tGO:0042597\tPMID:19919675\tIDA\t\tC\tCaiX\tCaiX|caiX|carnitine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5388\tcaiX\t\tGO:0015226\tPMID:19919675\tIDA\t\tF\tCaiX\tCaiX|caiX|carnitine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5388\tcaiX\t\tGO:0005275\tPMID:19919675\tIDA\t\tF\tCaiX\tCaiX|caiX|carnitine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5388\tcaiX\t\tGO:0043190\tPMID:19919675\tIDA\t\tC\tCaiX\tCaiX|caiX|carnitine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5388\tcaiX\t\tGO:0015879\tPMID:19406895\tIMP\t\tP\tCaiX\tCaiX|caiX|carnitine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5388\tcaiX\t\tGO:0015879\tPMID:19919675\tIDA\t\tP\tCaiX\tCaiX|caiX|carnitine-specific binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5389\tcdhR\t\tGO:0009896\tPMID:19406895\tIMP\t\tP\tCdhR, transcriptional regulator\tcdhR|CdhR, transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5389\tcdhR\t\tGO:0006355\tPMID:19406895\tIMP\t\tP\tCdhR, transcriptional regulator\tcdhR|CdhR, transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5394\tcls\t\tGO:0008808\tPMID:1663113\tISS\t\tF\tcardiolipin synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5394\tcls\t\tGO:0032049\tPMID:353047\tISS\t\tP\tcardiolipin synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5396\tPA5396\t\tGO:0042426\tPMID:17951379\tIMP\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5396\tPA5396\t\tGO:0031457\tPMID:17951379\tIMP\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5397\tPA5397\t\tGO:0042426\tPMID:17951379\tIMP\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5397\tPA5397\t\tGO:0031457\tPMID:17951379\tIMP\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5398\tdgcA\t\tGO:0042426\tPMID:17951379\tIMP\t\tP\tDgcA, Dimethylglycine catabolism\tdgcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5398\tdgcA\t\tGO:0031457\tPMID:17951379\tIMP\t\tP\tDgcA, Dimethylglycine catabolism\tdgcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5398\tdgcA\t\tGO:0047865\tPMID:17951379\tIDA\t\tF\tDgcA, Dimethylglycine catabolism\tdgcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5398\tdgcA\t\tGO:0047866\tPMID:17951379\tIDA\t\tF\tDgcA, Dimethylglycine catabolism\tdgcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5399\tdgcB\t\tGO:0042426\tPMID:17951379\tIMP\t\tP\tDgcB, Dimethylglycine catabolism\tdgcB|DgcB, Dimethylglycine catabolism\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5399\tdgcB\t\tGO:0031457\tPMID:17951379\tIMP\t\tP\tDgcB, Dimethylglycine catabolism\tdgcB|DgcB, Dimethylglycine catabolism\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5399\tdgcB\t\tGO:0047865\tPMID:17951379\tIDA\t\tF\tDgcB, Dimethylglycine catabolism\tdgcB|DgcB, Dimethylglycine catabolism\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5399\tdgcB\t\tGO:0047866\tPMID:17951379\tIDA\t\tF\tDgcB, Dimethylglycine catabolism\tdgcB|DgcB, Dimethylglycine catabolism\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5410\tgbcA\t\tGO:0031457\tPMID:17951379\tIMP\t\tP\tGbcA\tglycine betaine catabolism protein|gbcA|GbcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5410\tgbcA\t\tGO:0051537\tPMID:17951379\tISS\t\tF\tGbcA\tglycine betaine catabolism protein|gbcA|GbcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5411\tgbcB\t\tGO:0031457\tPMID:17951379\tIMP\t\tP\tGbcB\tglycine betaine catabolism protein|gbcB|GbcB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5411\tgbcB\t\tGO:0016491\tPMID:17951379\tIDA\t\tF\tGbcB\tglycine betaine catabolism protein|gbcB|GbcB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5416\tsoxB\t\tGO:1901053\tPMID:17951379\tIMP\t\tP\tsarcosine oxidase beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5416\tsoxB\t\tGO:1901053\tPMID:17951379\tIMP\t\tP\tsarcosine oxidase beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5416\tsoxB\t\tGO:0008115\tPMID:17951380\tIMP\t\tF\tsarcosine oxidase beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5417\tsoxD\t\tGO:1901053\tPMID:17951379\tIMP\t\tP\tsarcosine oxidase delta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5417\tsoxD\t\tGO:1901053\tPMID:17951381\tIMP\t\tP\tsarcosine oxidase delta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5417\tsoxD\t\tGO:0008115\tPMID:17951382\tIMP\t\tF\tsarcosine oxidase delta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5418\tsoxA\t\tGO:1901053\tPMID:17951379\tIMP\t\tP\tsarcosine oxidase alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5418\tsoxA\t\tGO:1901053\tPMID:17951383\tIMP\t\tP\tsarcosine oxidase alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5418\tsoxA\t\tGO:0008115\tPMID:17951384\tIMP\t\tF\tsarcosine oxidase alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5419\tsoxG\t\tGO:1901053\tPMID:17951379\tIMP\t\tP\tsarcosine oxidase gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5419\tsoxG\t\tGO:1901053\tPMID:17951385\tIMP\t\tP\tsarcosine oxidase gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5419\tsoxG\t\tGO:0008115\tPMID:17951386\tIMP\t\tF\tsarcosine oxidase gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5420\tpurU2\t\tGO:0008864\tPMID:7868604\tISS\t\tF\tformyltetrahydrofolate deformylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5420\tpurU2\t\tGO:0009152\tPMID:7868604\tISS\t\tP\tformyltetrahydrofolate deformylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5422\tPA5422\t\tGO:0008976\tPMID:9734809\tIMP\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5422\tPA5422\t\tGO:0006798\tPMID:9734809\tIMP\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5434\tmtr\t\tGO:0015827\tPMID:1987112\tISS\t\tP\ttryptophan permease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5443\tuvrD\t\tGO:0006298\tPMID:11952911\tIMP\t\tP\tDNA helicase II\trecL|rad|pdeB|mutU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5447\twbpZ\t\tGO:0009103\tPMID:9680202\tIMP\t\tP\tglycosyltransferase WbpZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5447\twbpZ\t\tGO:0009243\tPMID:9680202\tIDA\t\tP\tglycosyltransferase WbpZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5447\twbpZ\t\tGO:0016757\tPMID:23664878\tEXP\t\tF\tglycosyltransferase WbpZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5447\twbpZ\t\tGO:0033296\tPMID:23664878\tEXP\t\tF\tglycosyltransferase WbpZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5447\twbpZ\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tglycosyltransferase WbpZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5448\twbpY\t\tGO:0009103\tPMID:9680202\tIMP\t\tP\tglycosyltransferase WbpY\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5448\twbpY\t\tGO:0009243\tPMID:9680202\tIDA\t\tP\tglycosyltransferase WbpY\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5448\twbpY\t\tGO:0016757\tPMID:9680202\tIMP\t\tF\tglycosyltransferase WbpY\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5448\twbpY\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tglycosyltransferase WbpY\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5449\twbpX\t\tGO:0009103\tPMID:9680202\tIMP\t\tP\tglycosyltransferase WbpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5449\twbpX\t\tGO:0009243\tPMID:9680202\tIDA\t\tP\tglycosyltransferase WbpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5449\twbpX\t\tGO:0016757\tPMID:9680202\tIMP\t\tF\tglycosyltransferase WbpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5449\twbpX\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tglycosyltransferase WbpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5450\twzt\t\tGO:0015920\tPMID:9244257\tIMP\t\tP\tABC subunit of A-band LPS efflux transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5450\twzt\t\tGO:0035796\tPMID:9244257\tISS\tUniProtKB:Q07698\tC\tABC subunit of A-band LPS efflux transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5450\twzt\t\tGO:0009243\tPMID:9244257\tIMP\t\tP\tABC subunit of A-band LPS efflux transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5450\twzt\t\tGO:0070258\tPMID:23223798\tEXP\t\tC\tABC subunit of A-band LPS efflux transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5451\twzm\t\tGO:0015920\tPMID:9244257\tIMP\t\tP\tmembrane subunit of A-band LPS efflux transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5451\twzm\t\tGO:0055085\tPMID:9244257\tISS\tUniProtKB:Q48478\tP\tmembrane subunit of A-band LPS efflux transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5451\twzm\t\tGO:0009243\tPMID:9244257\tIMP\t\tP\tmembrane subunit of A-band LPS efflux transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5451\twzm\t\tGO:0070258\tPMID:23223798\tEXP\t\tC\tmembrane subunit of A-band LPS efflux transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5452\twbpW\t\tGO:0009103\tPMID:9781879\tIMP\t\tP\tphosphomannose isomerase/GDP-mannose WbpW\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5452\twbpW\t\tGO:0009243\tPMID:19659934\tIDA\t\tP\tphosphomannose isomerase/GDP-mannose WbpW\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5452\twbpW\t\tGO:0009298\tPMID:9781879\tIDA\t\tP\tphosphomannose isomerase/GDP-mannose WbpW\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5453\tgmd\t\tGO:0009103\tPMID:8548534\tIMP\t\tP\tGDP-mannose 4,6-dehydratase\tlpsA|gca\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5453\tgmd\t\tGO:0009243\tPMID:19459932\tIDA\t\tP\tGDP-mannose 4,6-dehydratase\tlpsA|gca\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5453\tgmd\t\tGO:0019306\tPMID:19459932\tEXP\t\tP\tGDP-mannose 4,6-dehydratase\tlpsA|gca\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5453\tgmd\t\tGO:0008446\tPMID:9781879\tEXP\t\tF\tGDP-mannose 4,6-dehydratase\tlpsA|gca\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5454\trmd\t\tGO:0009103\tPMID:9781879\tIMP\t\tP\toxidoreductase Rmd\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5454\trmd\t\tGO:0009243\tPMID:19459932\tIDA\t\tP\toxidoreductase Rmd\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5454\trmd\t\tGO:0019306\tPMID:19459932\tEXP\t\tP\toxidoreductase Rmd\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5454\trmd\t\tGO:0070402\tPMID:23341552\tEXP\t\tF\toxidoreductase Rmd\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5455\tPA5455\t\tGO:0009103\tPMID:23341552\tIMP\t\tP\tputative glycosyltransferase\tputative glycosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5455\tPA5455\t\tGO:0009243\tPMID:23341552\tIDA\t\tP\tputative glycosyltransferase\tputative glycosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5455\tPA5455\t\tGO:0016757\tPMID:23341552\tIDA\t\tF\tputative glycosyltransferase\tputative glycosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5455\tPA5455\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tputative glycosyltransferase\tputative glycosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5456\tPA5456\t\tGO:0009103\tPMID:23341552\tIMP\t\tP\tputative glycosyltransferase\tputative glycosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5456\tPA5456\t\tGO:0009243\tPMID:23341552\tIDA\t\tP\tputative glycosyltransferase\tputative glycosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5456\tPA5456\t\tGO:0016757\tPMID:23341552\tIDA\t\tF\tputative glycosyltransferase\tputative glycosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5456\tPA5456\t\tGO:0009103\tPMID:23341552\tIMP\t\tP\tputative glycosyltransferase\tputative glycosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5456\tPA5456\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tputative glycosyltransferase\tputative glycosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5457\tPA5457\t\tGO:0009103\tPMID:23341552\tIMP\t\tP\tmethyltransferase\tputative methyltransferase|methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5457\tPA5457\t\tGO:0009243\tPMID:23341552\tIDA\t\tP\tmethyltransferase\tputative methyltransferase|methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5457\tPA5457\t\tGO:0008168\tPMID:23341552\tISS\tUniProtKB:J7I4B7\tF\tmethyltransferase\tputative methyltransferase|methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5457\tPA5457\t\tGO:0009103\tPMID:23341552\tIMP\t\tP\tmethyltransferase\tputative methyltransferase|methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5458\tPA5458\t\tGO:0009103\tPMID:23341552\tIMP\t\tP\tputative acetyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5458\tPA5458\t\tGO:0009243\tPMID:23341552\tIDA\t\tP\tputative acetyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5458\tPA5458\t\tGO:0016407\tPMID:23341552\tISS\t\tF\tputative acetyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5458\tPA5458\t\tGO:0009103\tPMID:23341552\tIMP\t\tP\tputative acetyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5459\tPA5459\t\tGO:0009103\tPMID:23341552\tIMP\t\tP\tputative methyltransferase\tputative methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5459\tPA5459\t\tGO:0009243\tPMID:23341552\tIDA\t\tP\tputative methyltransferase\tputative methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5459\tPA5459\t\tGO:0008168\tPMID:23341552\tISS\tUniProtKB:J7I4B7\tF\tputative methyltransferase\tputative methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5459\tPA5459\t\tGO:0009103\tPMID:23341552\tIMP\t\tP\tputative methyltransferase\tputative methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5470\tPA5470\t\tGO:0046677\tPMID:16484195\tEXP\t\tP\tprobable peptide chain release factor\tprfH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5470\tPA5470\t\tGO:0042493\tPMID:16484195\tEXP\t\tP\tprobable peptide chain release factor\tprfH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5471\tarmZ\t\tGO:0032411\tPMID:16484195\tIMP\t\tP\tArmZ\tArmZ|armZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5471\tarmZ\t\tGO:0046677\tPMID:16484195\tEXP\t\tP\tArmZ\tArmZ|armZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5471\tarmZ\t\tGO:0042493\tPMID:16484195\tEXP\t\tP\tArmZ\tArmZ|armZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5483\talgB\t\tGO:1900232\tPMID:19168621\tIMP\t\tP\ttwo-component response regulator AlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5483\talgB\t\tGO:0044212\tPMID:17981963\tIDA\t\tF\ttwo-component response regulator AlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5483\talgB\t\tGO:0045862\tPMID:23024348\tIMP\t\tP\ttwo-component response regulator AlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5483\talgB\t\tGO:1900378\tPMID:23024348\tIMP\t\tP\ttwo-component response regulator AlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5483\talgB\t\tGO:2000147\tPMID:23024348\tIMP\t\tP\ttwo-component response regulator AlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5483\talgB\t\tGO:0045893\tPMID:1738315\tIMP\t\tP\ttwo-component response regulator AlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5483\talgB\t\tGO:0042121\tPMID:1738315\tIMP\t\tP\ttwo-component response regulator AlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5484\tkinB\t\tGO:0000155\tPMID:9218420\tIDA\t\tF\tKinB\tkinB|histidine kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5484\tkinB\t\tGO:0016791\tPMID:23024348\tIDA\t\tF\tKinB\tkinB|histidine kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5485\tampDh2\t\tGO:0008745\tPMID:23510438\tIDA\t\tF\tAmpDh2\tampDh2|AmpDh2 (changed from conserved hypothetical protein)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5485\tampDh2\t\tGO:0009276\tPMID:23510438\tIDA\t\tC\tAmpDh2\tampDh2|AmpDh2 (changed from conserved hypothetical protein)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5485\tampDh2\t\tGO:0033252\tPMID:23510438\tIDA\t\tP\tAmpDh2\tampDh2|AmpDh2 (changed from conserved hypothetical protein)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5487\tPA5487\t\tGO:0052621\tPMID:16477007\tIDA\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5490\tcc4\t\tGO:0020037\tPMID:7628463\tISS\tRefSeq:YP_001174525\tF\tcytochrome c4 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5490\tcc4\t\tGO:0009055\tPMID:17931594\tISS\t\tF\tcytochrome c4 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5493\tpolA\t\tGO:0003677\tPMID:4890764\tISS\tUniProtKB:P00582\tF\tDNA polymerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5493\tpolA\t\tGO:0006260\tPMID:4890764\tISS\t\tP\tDNA polymerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5493\tpolA\t\tGO:0008408\tPMID:4890764\tISS\t\tF\tDNA polymerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5493\tpolA\t\tGO:0090305\tPMID:4890764\tISS\t\tP\tDNA polymerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5493\tpolA\t\tGO:0003887\tPMID:13563462\tISS\t\tF\tDNA polymerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5495\tthrB\t\tGO:0004413\tPMID:10220164\tIDA\t\tF\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5495\tthrB\t\tGO:0009088\tPMID:10220164\tIDA\t\tP\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5496\tnrdJb\t\tGO:0004748\tPMID:15722359\tIDA\t\tF\tclass II (cobalamin-dependent) ribonucleotide-diphosphate reductase subunit, NrdJb\tnrdJb|NrdJb (changed from hypothetical protein)|class II (cobalamin-dependent) ribonucleotide-diphosphate reductase subunit, NrdJb\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5497\tnrdJa\t\tGO:0004748\tPMID:15722359\tIDA\t\tF\tclass II (cobalamin-dependent) ribonucleotide-diphosphate reductase subunit, NrdJa\tnrdJa|NrdJa (changed from hypothetical protein)|class II (cobalamin-dependent) ribonucleotide-diphosphate reductase subunit, NrdJa\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5498\tznuA\t\tGO:0006829\tPMID:9680209\tISS\t\tP\tZnuA\tznuA|ZnuA|probable adhesin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5498\tznuA\t\tGO:0010043\tPMID:24086521\tIMP\t\tP\tZnuA\tznuA|ZnuA|probable adhesin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5498\tznuA\t\tGO:0006829\tPMID:26290475\tIMP\t\tP\tZnuA\tznuA|ZnuA|probable adhesin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5498\tznuA\t\tGO:0000006\tPMID:9680209\tISS\tUniProtKB:P39172\tF\tZnuA\tznuA|ZnuA|probable adhesin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5498\tznuA\t\tGO:0008270\tPMID:26290475\tIDA\t\tF\tZnuA\tznuA|ZnuA|probable adhesin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5499\tzur\t\tGO:1900376\tPMID:12426334\tIMP\t\tP\tzinc uptake regulator, Zur\tzinc uptake regulator, Zur|zur|np20|transcriptional regulator np20\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5499\tzur\t\tGO:0071294\tPMID:24086521\tIMP\t\tP\tzinc uptake regulator, Zur\tzinc uptake regulator, Zur|zur|np20|transcriptional regulator np20\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5499\tzur\t\tGO:0071579\tPMID:24086521\tIMP\t\tP\tzinc uptake regulator, Zur\tzinc uptake regulator, Zur|zur|np20|transcriptional regulator np20\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5499\tzur\t\tGO:0003677\tPMID:24086521\tIDA\t\tF\tzinc uptake regulator, Zur\tzinc uptake regulator, Zur|zur|np20|transcriptional regulator np20\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5499\tzur\t\tGO:0045892\tPMID:24086521\tIDA\t\tP\tzinc uptake regulator, Zur\tzinc uptake regulator, Zur|zur|np20|transcriptional regulator np20\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5499\tzur\t\tGO:0006882\tPMID:24086521\tIMP\t\tP\tzinc uptake regulator, Zur\tzinc uptake regulator, Zur|zur|np20|transcriptional regulator np20\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5500\tznuC\t\tGO:0006829\tPMID:9680209\tISS\t\tP\tzinc transport protein ZnuC\tyebM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5500\tznuC\t\tGO:0010043\tPMID:24086521\tIMP\t\tP\tzinc transport protein ZnuC\tyebM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5501\tznuB\t\tGO:0006829\tPMID:9680209\tISS\t\tP\tpermease of ABC zinc transporter ZnuB\tyebI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5501\tznuB\t\tGO:0010043\tPMID:24086521\tIMP\t\tP\tpermease of ABC zinc transporter ZnuB\tyebI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5504\tPA5504\t\tGO:1903810\tPMID:18833300\tIMP\t\tP\tD-methionine ABC transporter membrane protein\tD-methionine ABC transporter membrane protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5511\tmifR\t\tGO:0000156\tPMID:19936057\tISS\t\tF\tMifR\tmifR|MifR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5511\tmifR\t\tGO:1900233\tPMID:19936057\tIMP\t\tP\tMifR\tmifR|MifR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5512\tmifS\t\tGO:0000155\tPMID:19936057\tISS\t\tF\tMifS\tmifS|MifS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5514\tPA5514\t\tGO:0008800\tPMID:16120476\tIGI\t\tF\tprobable beta-lactamase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5514\tPA5514\t\tGO:0030655\tPMID:16120476\tIGI\t\tP\tprobable beta-lactamase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5530\tPA5530\t\tGO:0006835\tPMID:24794562\tIMP\t\tP\tC5-dicarboxylate transporter\tC5-dicarboxylate transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5531\ttonB1\t\tGO:0044010\tPMID:17623027\tIMP\t\tP\tTonB1\ttonB|TonB|tonB1|TonB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5531\ttonB1\t\tGO:0071978\tPMID:17623027\tIMP\t\tP\tTonB1\ttonB|TonB|tonB1|TonB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5531\ttonB1\t\tGO:0043107\tPMID:17623027\tIMP\t\tP\tTonB1\ttonB|TonB|tonB1|TonB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5531\ttonB1\t\tGO:0071236\tPMID:11889114\tIMP\t\tP\tTonB1\ttonB|TonB|tonB1|TonB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5531\ttonB1\t\tGO:0015683\tPMID:10899848\tIMP\t\tP\tTonB1\ttonB|TonB|tonB1|TonB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5531\ttonB1\t\tGO:0009405\tPMID:10899848\tIMP\t\tP\tTonB1\ttonB|TonB|tonB1|TonB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5531\ttonB1\t\tGO:0033212\tPMID:8704984\tIMP\t\tP\tTonB1\ttonB|TonB|tonB1|TonB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5536\tdksA2\t\tGO:0070063\tPMID:23416301\tIDA\t\tF\tDksA2\tDksA2|dksA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5541\tpyrQ\t\tGO:0004151\tPMID:15278241\tIMP\t\tF\tdihydroorotase\tpyrC2|pyrQ|dihydroorotase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5541\tpyrQ\t\tGO:0006221\tPMID:15278241\tIMP\t\tP\tdihydroorotase\tpyrC2|pyrQ|dihydroorotase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5542\tPA5542\t\tGO:0046677\tPMID:25185138\tIMP\t\tP\tPseudomonas imipenem beta-lactamase PIB-1\tPseudomonas imipenem beta-lactamase PIB-1|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5542\tPA5542\t\tGO:0008800\tPMID:25185138\tIDA\t\tF\tPseudomonas imipenem beta-lactamase PIB-1\tPseudomonas imipenem beta-lactamase PIB-1|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5542\tPA5542\t\tGO:1901768\tPMID:25185138\tIMP\t\tP\tPseudomonas imipenem beta-lactamase PIB-1\tPseudomonas imipenem beta-lactamase PIB-1|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5549\tglmS\t\tGO:0004360\tPMID:3297136\tISS\t\tF\tglucosamine--fructose-6-phosphate aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5549\tglmS\t\tGO:0006048\tPMID:5541523\tISS\t\tP\tglucosamine--fructose-6-phosphate aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5550\tglmR\t\tGO:2000147\tPMID:14982774\tIMP\t\tP\tGlmR transcriptional regulator\tglmR|GlmR transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5550\tglmR\t\tGO:0032885\tPMID:14982774\tIMP\t\tP\tGlmR transcriptional regulator\tglmR|GlmR transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5550\tglmR\t\tGO:0045892\tPMID:14982774\tIMP\t\tP\tGlmR transcriptional regulator\tglmR|GlmR transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5550\tglmR\t\tGO:0045724\tPMID:14982774\tIMP\t\tP\tGlmR transcriptional regulator\tglmR|GlmR transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5552\tglmU\t\tGO:0006048\tPMID:8407787\tISS\t\tP\tglucosamine-1-phosphate acetyltransferase/N-acetylglucosamine-1-phosphate uridyltransferase\tgcaD|UDP-N-acetylglucosamine pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5552\tglmU\t\tGO:0003977\tPMID:8555230\tISS\t\tF\tglucosamine-1-phosphate acetyltransferase/N-acetylglucosamine-1-phosphate uridyltransferase\tgcaD|UDP-N-acetylglucosamine pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5553\tatpC\t\tGO:0046933\tPMID:6238948\tISS\tUniProtKB:P0A6E6\tF\tATP synthase epsilon chain\tpapG|uncC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5553\tatpC\t\tGO:0045261\tPMID:6238948\tISS\tUniProtKB:P0A6E6\tC\tATP synthase epsilon chain\tpapG|uncC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5554\tatpD\t\tGO:0046961\tPMID:158358\tISS\t\tF\tATP synthase beta chain\tpapB|uncD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5554\tatpD\t\tGO:0045261\tPMID:158358\tISS\t\tC\tATP synthase beta chain\tpapB|uncD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5555\tatpG\t\tGO:0045261\tPMID:2863270\tISS\t\tC\tATP synthase gamma chain\tpapC|uncG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5555\tatpG\t\tGO:0046933\tPMID:146491\tISS\t\tF\tATP synthase gamma chain\tpapC|uncG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5555\tatpG\t\tGO:0046961\tPMID:146491\tISS\t\tF\tATP synthase gamma chain\tpapC|uncG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5556\tatpA\t\tGO:0015986\tPMID:4256722\tISS\t\tP\tATP synthase alpha chain\tpapA|uncA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5556\tatpA\t\tGO:0045261\tPMID:153904\tISS\t\tC\tATP synthase alpha chain\tpapA|uncA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5558\tatpF\t\tGO:0045263\tPMID:6460031\tISS\t\tC\tATP synthase B chain\tpapF|uncF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5558\tatpF\t\tGO:0046933\tPMID:2863271\tISS\t\tF\tATP synthase B chain\tpapF|uncF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5558\tatpF\t\tGO:0046961\tPMID:6460031\tISS\t\tF\tATP synthase B chain\tpapF|uncF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5557\tatpH\t\tGO:0045261\tPMID:6294057\tISS\t\tC\tATP synthase delta chain\tpapE|uncH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5557\tatpH\t\tGO:0046933\tPMID:6294057\tISS\t\tF\tATP synthase delta chain\tpapE|uncH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5557\tatpH\t\tGO:0046961\tPMID:6294057\tISS\t\tF\tATP synthase delta chain\tpapE|uncH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5569\trnpA\t\tGO:0008033\tPMID:2415431\tISS\t\tP\tribonuclease P protein component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5569\trnpA\t\tGO:0001682\tPMID:167017\tISS\t\tP\tribonuclease P protein component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5569\trnpA\t\tGO:0004526\tPMID:7509797\tISS\t\tF\tribonuclease P protein component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5570\trpmH\t\tGO:0006412\tPMID:783033\tISS\t\tP\t50S ribosomal protein L34\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5564\tgidB\t\tGO:0008168\tPMID:17238915\tISS\t\tF\tglucose inhibited division protein B\tGidB protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5564\tgidB\t\tGO:0070043\tPMID:17238915\tISS\t\tF\tglucose inhibited division protein B\tGidB protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5564\tgidB\t\tGO:0070475\tPMID:17238915\tISS\t\tP\tglucose inhibited division protein B\tGidB protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5565\tgidA\t\tGO:0030488\tPMID:17062623\tISS\tUniProtKB:P0A6U3\tP\tglucose-inhibited division protein A\tGidA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5565\tgidA\t\tGO:0050660\tPMID:17062623\tISS\tUniProtKB:P0A6U3\tF\tglucose-inhibited division protein A\tGidA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5565\tgidA\t\tGO:0002098\tPMID:17062623\tISS\tUniProtKB:P0A6U3\tP\tglucose-inhibited division protein A\tGidA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5559\tatpE\t\tGO:0045263\tPMID:6460031\tISS\t\tC\tatp synthase C chain\tpapH|uncE|dicyclohexylcarbodiimide-binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5559\tatpE\t\tGO:0046933\tPMID:2863271\tISS\t\tF\tatp synthase C chain\tpapH|uncE|dicyclohexylcarbodiimide-binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5559\tatpE\t\tGO:0046961\tPMID:6460031\tISS\t\tF\tatp synthase C chain\tpapH|uncE|dicyclohexylcarbodiimide-binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5560\tatpB\t\tGO:0045263\tPMID:6460031\tISS\t\tC\tATP synthase A chain\tpapD|uncB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5560\tatpB\t\tGO:0046933\tPMID:2863271\tISS\t\tF\tATP synthase A chain\tpapD|uncB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5560\tatpB\t\tGO:0046961\tPMID:2863271\tISS\t\tF\tATP synthase A chain\tpapD|uncB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0001\tdnaA\t\tGO:0006260\tPMID:12068813\tISS\t\tP\tchromosomal replication initiator protein DnaA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0001\tdnaA\t\tGO:0003677\tPMID:7615570\tISS\t\tF\tchromosomal replication initiator protein DnaA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0001\tdnaA\t\tGO:0003688\tPMID:19833870\tISS\t\tF\tchromosomal replication initiator protein DnaA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0001\tdnaA\t\tGO:0043565\tPMID:10551881\tISS\t\tF\tchromosomal replication initiator protein DnaA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0002\tdnaN\t\tGO:0006271\tPMID:3519609\tISS\tUniProtKB:P0A988\tP\tDNA polymerase III, beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0003\trecF\t\tGO:0000731\tPMID:9108043\tISS\t\tP\tRecF protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0003\trecF\t\tGO:0009411\tPMID:9108043\tISS\t\tP\tRecF protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0005524\tPMID:9756859\tISS\t\tF\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0006265\tPMID:6327603\tISS\t\tP\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0042493\tPMID:9144789\tISS\t\tP\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0006351\tPMID:15535863\tISS\t\tP\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0003677\tPMID:6294616\tISS\t\tF\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0003918\tPMID:368801\tISS\t\tF\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0005\tlptA\t\tGO:0042171\tPMID:16079332\tIMP\t\tF\tlysophosphatidic acid acyltransferase, LptA\tplsC|lptA|lysophosphatidic acid acyltransferase, LptA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0005\tlptA\t\tGO:0008654\tPMID:16079332\tIMP\t\tP\tlysophosphatidic acid acyltransferase, LptA\tplsC|lptA|lysophosphatidic acid acyltransferase, LptA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0010\ttag\t\tGO:0006307\tPMID:3536857\tISS\tUniProtKB:P05100\tP\tDNA-3-methyladenine glycosidase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0010\ttag\t\tGO:0008725\tPMID:3536857\tISS\t\tF\tDNA-3-methyladenine glycosidase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0011\thtrB1\t\tGO:0034605\tPMID:22146126\tIMP\t\tP\tacyltransferase HtrB1\t2-OH-lauroyltransferase|htrB1|HtrB1|acyltransferase HtrB1|2-OH-lauroyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0011\thtrB1\t\tGO:0071470\tPMID:22146126\tIMP\t\tP\tacyltransferase HtrB1\t2-OH-lauroyltransferase|htrB1|HtrB1|acyltransferase HtrB1|2-OH-lauroyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0011\thtrB1\t\tGO:0071236\tPMID:22146126\tIMP\t\tP\tacyltransferase HtrB1\t2-OH-lauroyltransferase|htrB1|HtrB1|acyltransferase HtrB1|2-OH-lauroyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0011\thtrB1\t\tGO:0016747\tPMID:26223882\tIDA\t\tF\tacyltransferase HtrB1\t2-OH-lauroyltransferase|htrB1|HtrB1|acyltransferase HtrB1|2-OH-lauroyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0011\thtrB1\t\tGO:0009245\tPMID:26223882\tIDA\t\tP\tacyltransferase HtrB1\t2-OH-lauroyltransferase|htrB1|HtrB1|acyltransferase HtrB1|2-OH-lauroyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0018\tfmt\t\tGO:0004479\tPMID:6989606\tISS\tUniProtKB:P23882\tF\tmethionyl-tRNA formyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0018\tfmt\t\tGO:0022898\tPMID:19786597\tIMP\t\tP\tmethionyl-tRNA formyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0018\tfmt\t\tGO:0071951\tPMID:6989606\tISS\t\tP\tmethionyl-tRNA formyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0020\ttsaP\t\tGO:0042834\tPMID:24556993\tISS\tUniProtKB:D1DKP9\tF\tT4P secretin-associated protein TsaP\tT4P secretin-associated protein TsaP|tsaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0024\themF\t\tGO:0004109\tPMID:9767567\tIGI\t\tF\tcoproporphyrinogen III oxidase, aerobic\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0025\taroE\t\tGO:0000162\tPMID:3277621\tISS\t\tP\tshikimate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0025\taroE\t\tGO:0006520\tPMID:3277621\tISS\t\tP\tshikimate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0025\taroE\t\tGO:0006571\tPMID:3277621\tISS\t\tP\tshikimate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0025\taroE\t\tGO:0009094\tPMID:3277621\tISS\t\tP\tshikimate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0025\taroE\t\tGO:0004764\tPMID:3277621\tISS\t\tF\tshikimate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0527.1\trsmY\t\tGO:0045974\tPMID:16885472\tIMP\t\tP\tregulatory RNA RsmY\trsmY\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0527.1\trsmY\t\tGO:0043455\tPMID:16885472\tIMP\t\tP\tregulatory RNA RsmY\trsmY\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0527.1\trsmY\t\tGO:0009372\tPMID:16885472\tIMP\t\tP\tregulatory RNA RsmY\trsmY\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0527.1\trsmY\t\tGO:1900190\tPMID:16885472\tIMP\t\tP\tregulatory RNA RsmY\trsmY\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0527.1\trsmY\t\tGO:0030254\tPMID:21955777\tIMP\t\tP\tregulatory RNA RsmY\trsmY\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0527.1\trsmY\t\tGO:0033103\tPMID:19426209\tIDA\t\tP\tregulatory RNA RsmY\trsmY\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3621.1\trsmZ\t\tGO:0045974\tPMID:16885472\tIMP\t\tP\tregulatory RNA RsmZ\trsmZ\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3621.1\trsmZ\t\tGO:0043455\tPMID:16885472\tIMP\t\tP\tregulatory RNA RsmZ\trsmZ\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3621.1\trsmZ\t\tGO:0009372\tPMID:16885472\tIMP\t\tP\tregulatory RNA RsmZ\trsmZ\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3621.1\trsmZ\t\tGO:1900190\tPMID:16885472\tIMP\t\tP\tregulatory RNA RsmZ\trsmZ\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3621.1\trsmZ\t\tGO:0030254\tPMID:21955777\tIMP\t\tP\tregulatory RNA RsmZ\trsmZ\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3621.1\trsmZ\t\tGO:0033103\tPMID:19426209\tIDA\t\tP\tregulatory RNA RsmZ\trsmZ\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.1\tprrF1\t\tGO:0006417\tPMID:15210934\tIMP\t\tP\tregulatory RNA PrrF1\tPrrF1\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.1\tprrF1\t\tGO:0019222\tPMID:15210934\tIMP\t\tP\tregulatory RNA PrrF1\tPrrF1\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.1\tprrF1\t\tGO:0040033\tPMID:15210934\tIMP\t\tP\tregulatory RNA PrrF1\tPrrF1\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.1\tprrF1\t\tGO:0010106\tPMID:15210934\tIMP\t\tP\tregulatory RNA PrrF1\tPrrF1\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.1\tprrF1\t\tGO:1901966\tPMID:15210934\tIMP\t\tP\tregulatory RNA PrrF1\tPrrF1\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.1\tprrF1\t\tGO:0043421\tPMID:18424436\tIMP\t\tP\tregulatory RNA PrrF1\tPrrF1\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.1\tprrF1\t\tGO:0043609\tPMID:18424436\tIMP\t\tP\tregulatory RNA PrrF1\tPrrF1\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.2\tprrF2\t\tGO:0006417\tPMID:15210934\tIMP\t\tP\tregulatory RNA PrrF2\tPrrF2\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.2\tprrF2\t\tGO:0019222\tPMID:15210934\tIMP\t\tP\tregulatory RNA PrrF2\tPrrF2\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.2\tprrF2\t\tGO:0040033\tPMID:15210934\tIMP\t\tP\tregulatory RNA PrrF2\tPrrF2\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.2\tprrF2\t\tGO:0010106\tPMID:15210934\tIMP\t\tP\tregulatory RNA PrrF2\tPrrF2\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.2\tprrF2\t\tGO:1901966\tPMID:15210934\tIMP\t\tP\tregulatory RNA PrrF2\tPrrF2\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.2\tprrF2\t\tGO:0043421\tPMID:18424436\tIMP\t\tP\tregulatory RNA PrrF2\tPrrF2\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.2\tprrF2\t\tGO:0043609\tPMID:18424436\tIMP\t\tP\tregulatory RNA PrrF2\tPrrF2\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1781.1\tnalA\t\tGO:0090352\tPMID:22493305\tIMP\t\tP\tnitrogen assimilation leader A (NalA)\tnalA|P11|P11\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2958.1\trgsA\t\tGO:0010608\tPMID:27381272\tIMP\t\tP\tRgsA\trgsA\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2958.1\trgsA\t\tGO:1902201\tPMID:27381272\tIMP\t\tP\tRgsA\trgsA\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4421.1\trnpB\t\tGO:0004526\tPMID:7509797\tISS\tEcoGene:EG30069\tF\tRNA component of RNaseP, RnpB\trnpB\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4421.1\trnpB\t\tGO:0008033\tPMID:2415431\tISS\tEcoGene:EG30069\tP\tRNA component of RNaseP, RnpB\trnpB\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4421.1\trnpB\t\tGO:0001682\tPMID:167017\tISS\tEcoGene:EG30069\tP\tRNA component of RNaseP, RnpB\trnpB\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5471.1\tPA5471.1\t\tGO:0009386\tPMID:19465646\tIMP\t\tP\tPA5471 leader peptide\tPA5471 leader peptide\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5227.1\tssrS\t\tGO:0070063\tPMID:2438656\tISS\t\tF\t6S RNA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5227.1\tssrS\t\tGO:0070063\tPMID:20829285\tISS\t\tF\t6S RNA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5227.1\tssrS\t\tGO:0003899\tPMID:2438656\tISS\t\tF\t6S RNA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5227.1\tssrS\t\tGO:0003899\tPMID:20829285\tISS\t\tF\t6S RNA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3305.1\tphrS\t\tGO:0045975\tPMID:21375594\tIMP\t\tP\tPhrS\tphrS\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3305.1\tphrS\t\tGO:0009372\tPMID:21375594\tIMP\t\tP\tPhrS\tphrS\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3305.1\tphrS\t\tGO:0071456\tPMID:21375594\tIMP\t\tP\tPhrS\tphrS\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1552.1\tccoQ1\t\tGO:0004129\tPMID:14763990\tIMP\t\tF\tCytochrome c oxidase, cbb3-type, CcoQ subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1555.1\tccoQ2\t\tGO:0004129\tPMID:14763990\tIMP\t\tF\tCytochrome c oxidase, cbb3-type, CcoQ subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726.11\tcrcZ\t\tGO:0045975\tPMID:20080802\tIMP\t\tP\tCrcZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726.11\tcrcZ\t\tGO:0045975\tPMID:24945892\tIDA\t\tP\tCrcZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726.11\tcrcZ\t\tGO:0043609\tPMID:24945892\tIDA\t\tP\tCrcZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726.11\tcrcZ\t\tGO:0090549\tPMID:20080802\tIMP\t\tP\tCrcZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726.11\tcrcZ\t\tGO:0051955\tPMID:23115619\tIMP\t\tP\tCrcZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726.11\tcrcZ\t\tGO:0006521\tPMID:23115619\tIMP\t\tP\tCrcZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726.11\tcrcZ\t\tGO:0045734\tPMID:23115619\tIMP\t\tP\tCrcZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2126.1\tcgrB\t\tGO:0010628\tPMID:17890313\tIMP\t\tP\tcupA gene regulator B, CgrB\tcupA gene regulator B, CgrB|cgrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0019305\tPMID:10455186\tISS\t\tP\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0008460\tPMID:7559340\tISS\t\tF\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0009243\tPMID:9023210\tISS\t\tP\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0009244\tPMID:11065359\tISS\tUniProtKB:P37759\tP\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0008460\tPMID:11065359\tISS\tUniProtKB:P37759\tF\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0019305\tPMID:11065359\tISS\tUniProtKB:P37759\tP\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5125.1\tnrsZ\t\tGO:0009405\tPMID:24308329\tIMP\t\tP\tnitrogen-regulated sRNA, NrsZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5125.1\tnrsZ\t\tGO:0071978\tPMID:24308329\tIMP\t\tP\tnitrogen-regulated sRNA, NrsZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5125.1\tnrsZ\t\tGO:0006995\tPMID:24308329\tIMP\t\tP\tnitrogen-regulated sRNA, NrsZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5125.1\tnrsZ\t\tGO:1902021\tPMID:24308329\tIMP\t\tP\tnitrogen-regulated sRNA, NrsZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5125.1\tnrsZ\t\tGO:0009405\tPMID:24308329\tIMP\t\tP\tnitrogen-regulated sRNA, NrsZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5125.1\tnrsZ\t\tGO:0071978\tPMID:24308329\tIMP\t\tP\tnitrogen-regulated sRNA, NrsZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5125.1\tnrsZ\t\tGO:0006995\tPMID:24308329\tIMP\t\tP\tnitrogen-regulated sRNA, NrsZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5125.1\tnrsZ\t\tGO:1902021\tPMID:24308329\tIMP\t\tP\tnitrogen-regulated sRNA, NrsZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.3\tprrH\t\tGO:0006417\tPMID:20386693\tIMP\t\tP\tPrrH\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4704.3\tprrH\t\tGO:0019222\tPMID:20386693\tIMP\t\tP\tPrrH\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2559.1\tsrfA\t\tGO:0036460\tPMID:25336469\tIMP\t\tP\tSrfA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2683.1\ttsi5\t\tGO:0033103\tPMID:24794869\tIMP\t\tP\tTsi5\trhsI1|immunity protein RhsI1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2683.1\ttsi5\t\tGO:0097351\tPMID:24794869\tIMP\t\tF\tTsi5\trhsI1|immunity protein RhsI1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5492.1\tersA\t\tGO:0034605\tPMID:25186153\tIDA\t\tP\tErsA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5492.1\tersA\t\tGO:0036460\tPMID:25186153\tIDA\t\tP\tErsA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5492.1\tersA\t\tGO:0036293\tPMID:25186153\tIDA\t\tP\tErsA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5492.1\tersA\t\tGO:0003729\tPMID:25186153\tIDA\t\tF\tErsA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5492.1\tersA\t\tGO:0010608\tPMID:25186153\tIMP\t\tP\tErsA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1266.1\tlhpF\t\tGO:0019470\tPMID:27145750\tIGC\t\tP\tD-hydroxyproline dehydrogenase gamma-subunit, LphF\tD-hydroxyproline dehydrogenase gamma-subunit, LphF|lhpF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4674.1\thigB\t\tGO:0004540\tPMID:26987441\tISS\tPseudoCAP:PA14_61845\tF\tHigB\tHigB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\t\t",
                "type": "Invalid Qualifier",
                "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1",
                "obj": "EMPTY",
                "taxon": "NCBITaxon:208964",
                "rule": 59
            }
        ],
        "gorule-0000002": [],
        "gorule-0000005": [],
        "gorule-0000006": [],
        "gorule-0000007": [],
        "gorule-0000008": [
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0612\tptrB\t\tGO:0031328\tPMID:18227247\tIMP\t\tP\trepressor, PtrB\tptrB| New product name: repressor, PtrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0691\tphdA\t\tGO:0008219\tPMID:21696457\tIMP\t\tP\tprevent-host-death protein A\tPhdA|phdA|prevent-host-death protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0795\tprpC\t\tGO:0045239\tPMID:7626013\tIDA\t\tC\tcitrate synthase 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0070930\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1338\tggt\t\tGO:0050896\tPMID:2892489\tISS\t\tP\tgamma-glutamyltranspeptidase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1580\tgltA\t\tGO:0045239\tPMID:7626013\tIDA\t\tC\tcitrate synthase\tcisY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1714\texsD\t\tGO:0043392\tPMID:20008065\tIDA\t\tP\tExsD\texsD|ExsD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1714\texsD\t\tGO:0032091\tPMID:20008065\tIDA\t\tP\tExsD\texsD|ExsD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1806\tfabI\t\tGO:0016631\tPMID:10464225\tIDA\t\tF\tNADH-dependent enoyl-ACP reductase\tenvM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2277\tarsR\t\tGO:0048583\tPMID:9802012\tISA\tUniProtKB:P37309\tP\tArsR protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2387\tfpvI\t\tGO:0048518\tPMID:12562796\tIMP\t\tP\tFpvI\tfpvI|FpvI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2738\thimA\t\tGO:0044267\tPMID:7867950\tISS\t\tP\tintegration host factor, alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2924\thisQ\t\tGO:0006810\tPMID:1733937\tISS\t\tP\thistidine transport system permease HisQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0006810\tPMID:9922263\tIDA\t\tP\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3161\thimD\t\tGO:0044267\tPMID:8892836\tISS\t\tP\tintegration host factor beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3227\tppiA\t\tGO:0044267\tPMID:2007139\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase A\tcypH|Rotamase A, PPIase A|Cyclophilin A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3382\tphnE\t\tGO:0006810\tPMID:2155230\tISS\t\tP\tphosphonate transport protein PhnE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3406\thasD\t\tGO:0006810\tPMID:9244262\tISS\t\tP\ttransport protein HasD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0009607\tPMID:18455339\tIDA\t\tP\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3540\talgD\t\tGO:0009628\tPMID:24496793\tIDA\t\tP\tGDP-mannose 6-dehydrogenase AlgD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3541\talg8\t\tGO:0050896\tPMID:8294014\tISS\t\tP\talginate biosynthesis protein Alg8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3543\talgK\t\tGO:0042710\tPMID:9457868\tIDA\t\tP\talginate biosynthetic protein AlgK precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3544\talgE\t\tGO:0050896\tPMID:10411261\tISS\t\tP\tAlginate production outer membrane protein AlgE precursor\talg76|alginate production protein AlgE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3545\talgG\t\tGO:0050896\tPMID:8144447\tIDA\t\tP\talginate-c5-mannuronan-epimerase AlgG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3546\talgX\t\tGO:0050896\tPMID:15489449\tIDA\t\tP\talginate biosynthesis protein AlgX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3547\talgL\t\tGO:0050896\tPMID:8370530\tIDA\t\tP\tpoly(beta-d-mannuronate) lyase precursor AlgL\tAlginate lyase (AlgL)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3549\talgJ\t\tGO:0050896\tPMID:8636017\tIDA\t\tP\talginate o-acetyltransferase AlgJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3550\talgF\t\tGO:0050896\tPMID:7934909\tIDA\t\tP\talginate o-acetyltransferase AlgF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3563\tfruR\t\tGO:0006810\tPMID:9237914\tISS\t\tP\tfructose transport system repressor FruR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3624\tpcm\t\tGO:0044267\tPMID:9573145\tISS\t\tP\tL-isoaspartate protein carboxylmethyltransferase type II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3635\teno\t\tGO:0044267\tPMID:8988374\tISS\t\tP\tenolase\tphosphopyruvate hydratase|2-phosphoglycerate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3737\tdsbC\t\tGO:0044267\tPMID:7536035\tISS\t\tP\tthiol:disulfide interchange protein DsbC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3823\ttgt\t\tGO:0044267\tPMID:1706703\tISS\t\tP\tqueuine tRNA-ribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4110\tampC\t\tGO:0050896\tPMID:8405939\tIDA\t\tP\tbeta-lactamase precursor\tcephalosporinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4521\tampE\t\tGO:0050896\tPMID:9835532\tIMP\t\tP\tAmpE\tampE|AmpE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4706\tphuV\t\tGO:0006810\tPMID:10658665\tIMP\t\tP\tPhuV\tphuV|PhuV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4707\tphuU\t\tGO:0006810\tPMID:10658665\tIMP\t\tP\tPhuU\tphuU|PhuU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4723\tdksA\t\tGO:2000679\tPMID:15853892\tIMP\t\tP\tsuppressor protein DksA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5493\tpolA\t\tGO:0090305\tPMID:4890764\tISS\t\tP\tDNA polymerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            }
        ],
        "gorule-0000011": [],
        "gorule-0000015": [],
        "gorule-0000016": [],
        "gorule-0000017": [],
        "gorule-0000018": [],
        "gorule-0000022": [],
        "gorule-0000026": [],
        "gorule-0000028": [],
        "gorule-0000029": [
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1657\thsiB2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tHsiB2\tHsiB2|hsiB2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1659\thsiF2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tHsiF2\tHsiF2|hsiF2|tssE2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1660\thsiG2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tHsiG2\tHsiG2|hsiG2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1661\thsiH2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tHsiH2\tHsiH2|hsiH2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1665\tfha2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tFha2\tFha2|fha2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1666\tlip2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tLip2\tLip2|lip2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1667\thsiJ2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tHsiJ2\tHsiJ2|hsiJ2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1669\ticmF2\t\tGO:0033103\tPMID:18524912\tIEA\t\tP\tIcmF2\tIcmF2|icmF2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3150\twbpG\t\tGO:0016787\tPMID:18621892\tIEA\t\tF\tLPS biosynthesis protein WbpG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3150\twbpG\t\tGO:0009103\tPMID:18621892\tIEA\t\tP\tLPS biosynthesis protein WbpG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3150\twbpG\t\tGO:0009276\tPMID:18621892\tIEA\t\tC\tLPS biosynthesis protein WbpG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3157\tPA3157\t\tGO:0016020\tPMID:12057956\tIEA\t\tC\tprobable acetyltransferase\twbpC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5001\tssg\t\tGO:0016757\tPMID:21166709\tIEA\t\tF\tcell surface-sugar biosynthetic glycosyltransferase, Ssg\tssg|cell surface-sugar biosynthetic glycosyltransferase, Ssg|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5005\tPA5005\t\tGO:0016740\tPMID:21810964\tIEA\t\tF\tprobable carbamoyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000029: All IEAs over a year are warned, all IEAs over three are removed",
                "obj": "",
                "taxon": "",
                "rule": 29
            }
        ],
        "gorule-0000030": [],
        "gorule-0000037": [],
        "gorule-0000039": [],
        "gorule-0000042": [],
        "gorule-0000043": [],
        "gorule-0000046": [],
        "gorule-0000050": [],
        "gorule-0000055": [],
        "gorule-0000058": [],
        "gorule-0000061": [
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1178\toprH\t\tGO:0016021\tPMID:2498288\tIDA\t\tC\tPhoP/Q and low Mg2+ inducible outer membrane protein H1 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025",
                "obj": "",
                "taxon": "",
                "rule": 61
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1447\tfliQ\t\tGO:0016021\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025",
                "obj": "",
                "taxon": "",
                "rule": 61
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1448\tfliR\t\tGO:0016021\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025",
                "obj": "",
                "taxon": "",
                "rule": 61
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3933\tbetT3\t\tGO:0016021\tPMID:21478341\tIDA\t\tC\tBetT3\tbetT3|BetT3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025",
                "obj": "",
                "taxon": "",
                "rule": 61
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5291\tbetT2\t\tGO:0016021\tPMID:18156257\tIDA\t\tC\tBetT2\tbetT2|BetT2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025",
                "obj": "",
                "taxon": "",
                "rule": 61
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5375\tbetT1\t\tGO:0016021\tPMID:21478341\tIDA\t\tC\tBetT1\tBetT1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025",
                "obj": "",
                "taxon": "",
                "rule": 61
            }
        ],
        "gorule-0000063": [
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0035\ttrpA\t\tGO:0006520\tPMID:3127651\tISS\t\tP\ttryptophan synthase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0035\ttrpA\t\tGO:0000162\tPMID:3127651\tISS\t\tP\ttryptophan synthase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0035\ttrpA\t\tGO:0004834\tPMID:3127651\tISS\t\tF\ttryptophan synthase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0036\ttrpB\t\tGO:0006520\tPMID:3127651\tISS\t\tP\ttryptophan synthase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0036\ttrpB\t\tGO:0000162\tPMID:3127651\tISS\t\tP\ttryptophan synthase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0036\ttrpB\t\tGO:0004834\tPMID:3127651\tISS\t\tF\ttryptophan synthase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0151\tPA0151\t\tGO:0038023\tPMID:18086184\tISS\t\tF\tprobable TonB-dependent receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0247\tpobA\t\tGO:0018659\tPMID:2465205\tISS\t\tF\tp-hydroxybenzoate hydroxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0247\tpobA\t\tGO:0043639\tPMID:2465205\tISS\t\tP\tp-hydroxybenzoate hydroxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0376\trpoH\t\tGO:0006355\tPMID:7698670\tISS\t\tP\tsigma factor RpoH\theat-shock sigma factor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0471\tfiuR\t\tGO:0005886\tPMID:16484199\tISS\t\tC\tFiuR\tfiuR|FiuR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0576\trpoD\t\tGO:0016987\tPMID:1902749\tISS\t\tF\tsigma factor RpoD\trpoDA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0676\tvreR\t\tGO:0005886\tPMID:19730690\tISS\t\tC\tsigma factor regulator, VreR\tvreR|sigma factor regulator, VreR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0678\thxcU\t\tGO:0015627\tPMID:11985723\tISS\t\tC\tHxcU\thxcU|HxcU|HxcU putative pseudopilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0679\thxcP\t\tGO:0015627\tPMID:11985723\tISS\t\tC\tHxcP\thxcP|HxcP|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0683\thxcY\t\tGO:0015627\tPMID:11985723\tISS\t\tC\tHxcY\thxcY|HxcY|probable type II secretion system protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0684\thxcZ\t\tGO:0015627\tPMID:11985723\tISS\t\tC\tHxcZ\thxcZ|HxcZ|probable type II secretion system protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0687\thxcS\t\tGO:0015627\tPMID:11985723\tISS\t\tC\tHxcS\thxcS|HxcS|probable type II secretion system protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0732\tPA0732\t\tGO:0071972\tPMID:23062283\tISS\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0732\tPA0732\t\tGO:0008234\tPMID:23062283\tISS\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0870\tphhC\t\tGO:0006559\tPMID:8939433\tISS\t\tP\taromatic amino acid aminotransferase\taspC|tyrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0871\tphhB\t\tGO:0006559\tPMID:8939433\tISS\t\tP\tpterin-4-alpha-carbinolamine dehydratase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0872\tphhA\t\tGO:0006559\tPMID:8939433\tISS\t\tP\tphenylalanine-4-hydroxylase\tphenylalanine 4-monooxygenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0928\tgacS\t\tGO:0000155\tPMID:7604262\tISS\t\tF\tsensor/response regulator hybrid\tlemA|gacS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0938\twzz2\t\tGO:0043165\tPMID:20418877\tISS\t\tP\tWzz2\twzz2|Wzz2|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1014\twapB\t\tGO:0009244\tPMID:23750877\tISS\t\tP\t1,2-glucosyltransferase WapB\t1,2-glucosyltransferase WapB|wapB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1047\tPA1047\t\tGO:0052689\tPMID:17631636\tISS\t\tF\tprobable esterase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1047\tPA1047\t\tGO:0042597\tPMID:17631636\tISS\t\tC\tprobable esterase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1049\tpdxH\t\tGO:0004733\tPMID:7860596\tISS\t\tF\tpyridoxine 5'-phosphate oxidase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1077\tflgB\t\tGO:0044780\tPMID:2129540\tISS\t\tP\tflagellar basal-body rod protein FlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1077\tflgB\t\tGO:0009429\tPMID:2129540\tISS\t\tC\tflagellar basal-body rod protein FlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1078\tflgC\t\tGO:0044780\tPMID:2129540\tISS\t\tP\tflagellar basal-body rod protein FlgC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1078\tflgC\t\tGO:0009429\tPMID:2129540\tISS\t\tC\tflagellar basal-body rod protein FlgC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1079\tflgD\t\tGO:0009424\tPMID:8157595\tISS\t\tC\tflagellar basal-body rod modification protein FlgD\tflagellar hook cap (scaffold)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1079\tflgD\t\tGO:0032947\tPMID:8157595\tISS\t\tF\tflagellar basal-body rod modification protein FlgD\tflagellar hook cap (scaffold)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1081\tflgF\t\tGO:0044780\tPMID:2129540\tISS\t\tP\tflagellar basal-body rod protein FlgF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1081\tflgF\t\tGO:0009429\tPMID:2129540\tISS\t\tC\tflagellar basal-body rod protein FlgF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1082\tflgG\t\tGO:0044780\tPMID:2129540\tISS\t\tP\tflagellar basal-body rod protein FlgG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1082\tflgG\t\tGO:0009426\tPMID:2129540\tISS\t\tC\tflagellar basal-body rod protein FlgG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1083\tflgH\t\tGO:0071973\tPMID:2544561\tISS\t\tP\tflagellar L-ring protein precursor FlgH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1083\tflgH\t\tGO:0009427\tPMID:2544561\tISS\t\tC\tflagellar L-ring protein precursor FlgH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1084\tflgI\t\tGO:0009428\tPMID:2544561\tISS\t\tC\tflagellar P-ring protein precursor FlgI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1084\tflgI\t\tGO:0044780\tPMID:2544561\tISS\t\tP\tflagellar P-ring protein precursor FlgI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1085\tflgJ\t\tGO:0003796\tPMID:10049388\tISS\t\tF\tflagellar protein FlgJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1085\tflgJ\t\tGO:0044780\tPMID:10049388\tISS\t\tP\tflagellar protein FlgJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1086\tflgK\t\tGO:0009424\tPMID:2193164\tISS\t\tC\tflagellar hook-associated protein 1 FlgK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1086\tflgK\t\tGO:0044780\tPMID:2193164\tISS\t\tP\tflagellar hook-associated protein 1 FlgK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1087\tflgL\t\tGO:0009424\tPMID:2193164\tISS\t\tC\tflagellar hook-associated protein type 3 FlgL\tflaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1087\tflgL\t\tGO:0044780\tPMID:2193164\tISS\t\tP\tflagellar hook-associated protein type 3 FlgL\tflaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1098\tfleS\t\tGO:0000155\tPMID:7591148\tISS\t\tF\ttwo-component sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1099\tfleR\t\tGO:0000156\tPMID:7591148\tISS\t\tF\ttwo-component response regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1100\tfliE\t\tGO:0009424\tPMID:1551848\tISS\t\tC\tflagellar hook-basal body complex protein FliE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1100\tfliE\t\tGO:0009425\tPMID:1551848\tISS\t\tC\tflagellar hook-basal body complex protein FliE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1102\tfliG\t\tGO:0009288\tPMID:8224881\tISS\t\tC\tflagellar motor switch protein FliG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1102\tfliG\t\tGO:0003774\tPMID:8224881\tISS\t\tF\tflagellar motor switch protein FliG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1104\tfliI\t\tGO:0005524\tPMID:8491729\tISS\t\tF\tflagellum-specific ATP synthase FliI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1104\tfliI\t\tGO:0016887\tPMID:8491729\tISS\t\tF\tflagellum-specific ATP synthase FliI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1172\tnapC\t\tGO:0008940\tPMID:7639719\tISS\t\tF\tcytochrome c-type protein NapC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1175\tnapD\t\tGO:0008940\tPMID:7639719\tISS\t\tF\tNapD protein of periplasmic nitrate reductase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1176\tnapF\t\tGO:0009325\tPMID:15371424\tISS\t\tC\tferredoxin protein NapF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1177\tnapE\t\tGO:0009325\tPMID:9560320\tISS\t\tC\tperiplasmic nitrate reductase protein NapE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1183\tdctA\t\tGO:0015741\tPMID:21725012\tISS\t\tP\tC4-dicarboxylate transport protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1198\tPA1198\t\tGO:0008239\tPMID:23062283\tISS\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1199\tPA1199\t\tGO:0008239\tPMID:23062283\tISS\t\tF\tprobable lipoprotein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1207\tkefB\t\tGO:0015503\tPMID:7934942\tISS\t\tF\tglutathione-regulated potassium-efflux system protein KefB\ttrkB|kefC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1272\tcobO\t\tGO:0008817\tPMID:1917862\tISS\t\tF\tcob(I)alamin adenosyltransferase\tcobA|btuR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1275\tcobD\t\tGO:0009236\tPMID:2211520\tISS\t\tP\tcobalamin biosynthetic protein CobD\tcbiB|cobalamin biosynthetic protein CbiB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1276\tcobC\t\tGO:0009236\tPMID:2211520\tISS\t\tP\tcobalamin biosynthetic protein CobC\tcobD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1277\tcobQ\t\tGO:0051921\tPMID:1655697\tISS\t\tF\tcobyric acid synthase\tcbiP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1301\tPA1301\t\tGO:0016989\tPMID:18086184\tISS\t\tF\tprobable transmembrane sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1302\tPA1302\t\tGO:0038023\tPMID:18086184\tISS\t\tF\tprobable heme utilization protein precursor\thxuC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1310\tphnW\t\tGO:0030170\tPMID:6406228\tISS\t\tF\t2-aminoethylphosphonate:pyruvate aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1310\tphnW\t\tGO:0047304\tPMID:6406228\tISS\t\tF\t2-aminoethylphosphonate:pyruvate aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1317\tcyoA\t\tGO:0009319\tPMID:2162835\tISS\t\tC\tcytochrome o ubiquinol oxidase subunit II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1336\taauS\t\tGO:0000156\tPMID:17021207\tISS\t\tF\tAauS\tAauS|aauS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1338\tggt\t\tGO:0036374\tPMID:2892489\tISS\t\tF\tgamma-glutamyltranspeptidase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1338\tggt\t\tGO:0042597\tPMID:1360205\tISS\t\tC\tgamma-glutamyltranspeptidase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1338\tggt\t\tGO:0050896\tPMID:2892489\tISS\t\tP\tgamma-glutamyltranspeptidase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1339\taatP\t\tGO:0043190\tPMID:25082951\tISS\t\tC\tAatP\tamino acid ABC transporter ATP binding protein|AatP|aatP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1340\taatM\t\tGO:0043190\tPMID:25082951\tISS\t\tC\tAatM\tamino acid ABC transporter membrane protein|AatM|aatM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1341\taatQ\t\tGO:0043190\tPMID:25082951\tISS\t\tC\tAatQ\tamino acid ABC transporter membrane protein|AatQ|aatQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1361\tnorM\t\tGO:0015238\tPMID:9661020\tISS\t\tF\tNorM\tydhE|norM|NorM|pmpM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1363\tPA1363\t\tGO:0016987\tPMID:18086184\tISS\t\tF\tECF sigma factor\tECF sigma factor|probable sigma-70 factor, ECF subfamily\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1363\tPA1363\t\tGO:0034756\tPMID:18086184\tISS\t\tP\tECF sigma factor\tECF sigma factor|probable sigma-70 factor, ECF subfamily\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1373\tfabF2\t\tGO:0004315\tPMID:9013860\tISS\t\tF\t3-oxoacyl-acyl carrier protein synthase II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1375\tpdxB\t\tGO:0033711\tPMID:2681152\tISS\t\tF\terythronate-4-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1375\tpdxB\t\tGO:0008615\tPMID:2681152\tISS\t\tP\terythronate-4-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1375\tpdxB\t\tGO:0042823\tPMID:2681152\tISS\t\tP\terythronate-4-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1375\tpdxB\t\tGO:0051287\tPMID:2681152\tISS\t\tF\terythronate-4-phosphate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1384\tgalE\t\tGO:0003978\tPMID:7507102\tISS\t\tF\tUDP-glucose 4-epimerase\tgalactowaldenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1384\tgalE\t\tGO:0033499\tPMID:7507102\tISS\t\tP\tUDP-glucose 4-epimerase\tgalactowaldenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1384\tgalE\t\tGO:0006012\tPMID:7507102\tISS\t\tP\tUDP-glucose 4-epimerase\tgalactowaldenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1384\tgalE\t\tGO:0044248\tPMID:7507102\tISS\t\tP\tUDP-glucose 4-epimerase\tgalactowaldenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1393\tcysC\t\tGO:0004020\tPMID:2828368\tISS\t\tF\tadenosine 5'-phosphosulfate (APS) kinase\tadenylylsulfate kinase|ATP:APS 3'-phosphotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1393\tcysC\t\tGO:0000103\tPMID:2828368\tISS\t\tP\tadenosine 5'-phosphosulfate (APS) kinase\tadenylylsulfate kinase|ATP:APS 3'-phosphotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1393\tcysC\t\tGO:0016301\tPMID:2828368\tISS\t\tF\tadenosine 5'-phosphosulfate (APS) kinase\tadenylylsulfate kinase|ATP:APS 3'-phosphotransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1409\taphA\t\tGO:0004040\tPMID:8824626\tISS\t\tF\tacetylpolyamine aminohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1409\taphA\t\tGO:0009446\tPMID:18192388\tISS\t\tP\tacetylpolyamine aminohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1443\tfliM\t\tGO:0003774\tPMID:8757287\tISS\t\tF\tflagellar motor switch protein FliM\tflaii protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1443\tfliM\t\tGO:0009425\tPMID:8757287\tISS\t\tC\tflagellar motor switch protein FliM\tflaii protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1443\tfliM\t\tGO:0071973\tPMID:8757287\tISS\t\tP\tflagellar motor switch protein FliM\tflaii protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1447\tfliQ\t\tGO:0016021\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1447\tfliQ\t\tGO:0009306\tPMID:10049367\tISS\t\tP\tflagellar biosynthetic protein FliQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1447\tfliQ\t\tGO:0009288\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1448\tfliR\t\tGO:0016021\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1448\tfliR\t\tGO:0009288\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1448\tfliR\t\tGO:0009306\tPMID:10049367\tISS\t\tP\tflagellar biosynthetic protein FliR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1449\tflhB\t\tGO:0098562\tPMID:8002587\tISS\t\tC\tflagellar biosynthetic protein FlhB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1449\tflhB\t\tGO:0009306\tPMID:10049367\tISS\t\tP\tflagellar biosynthetic protein FlhB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1449\tflhB\t\tGO:0009288\tPMID:10049367\tISS\t\tC\tflagellar biosynthetic protein FlhB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1452\tflhA\t\tGO:0098562\tPMID:8002587\tISS\t\tC\tflagellar biosynthesis protein FlhA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1452\tflhA\t\tGO:0009306\tPMID:10049367\tISS\t\tP\tflagellar biosynthesis protein FlhA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1452\tflhA\t\tGO:0009288\tPMID:10049367\tISS\t\tC\tflagellar biosynthesis protein FlhA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1453\tflhF\t\tGO:0005525\tPMID:1447978\tISS\t\tF\tflagellar biosynthesis protein FlhF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1453\tflhF\t\tGO:0009288\tPMID:1447978\tISS\t\tC\tflagellar biosynthesis protein FlhF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1453\tflhF\t\tGO:0044781\tPMID:17660418\tISS\t\tP\tflagellar biosynthesis protein FlhF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1456\tcheY\t\tGO:0050920\tPMID:1560774\tISS\t\tP\ttwo-component response regulator CheY\tregulatory component of sensory transduction system for chemotaxis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1456\tcheY\t\tGO:0000156\tPMID:8104179\tISS\t\tF\ttwo-component response regulator CheY\tregulatory component of sensory transduction system for chemotaxis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1475\tccmA\t\tGO:0017004\tPMID:7635817\tISS\t\tP\theme exporter protein CcmA\thelA|cycV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1476\tccmB\t\tGO:0017004\tPMID:7635817\tISS\t\tP\theme exporter protein CcmB\thelB|cycW|cyt10\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1477\tccmC\t\tGO:0017004\tPMID:7635817\tISS\t\tP\theme exporter protein CcmC\thelC|cycZ|pfcyt1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1479\tccmE\t\tGO:0017004\tPMID:7635817\tISS\t\tP\tcytochrome C-type biogenesis protein CcmE\tcycJ|pfcyt3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1480\tccmF\t\tGO:0017004\tPMID:7635817\tISS\t\tP\tcytochrome C-type biogenesis protein CcmF\tccl1|cycK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1481\tccmG\t\tGO:0017004\tPMID:7635817\tISS\t\tP\tcytochrome C biogenesis protein CcmG\tdsbE|Thiol:disulfide interchange protein DsbE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1482\tccmH\t\tGO:0017004\tPMID:7635817\tISS\t\tP\tcytochrome C-type biogenesis protein CcmH\tcycL|ccl2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1498\tpykF\t\tGO:0042866\tPMID:7559366\tISS\t\tP\tpyruvate kinase I\tpyk-I|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1502\tgcl\t\tGO:0009028\tPMID:18176558\tISS\t\tF\tglyoxylate carboligase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1502\tgcl\t\tGO:0030976\tPMID:18176558\tISS\t\tF\tglyoxylate carboligase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1502\tgcl\t\tGO:0009436\tPMID:4892366\tISS\t\tP\tglyoxylate carboligase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1502\tgcl\t\tGO:0046296\tPMID:4892366\tISS\t\tP\tglyoxylate carboligase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1528\tzipA\t\tGO:0000917\tPMID:9008158\tISS\t\tP\tcell division protein ZipA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1529\tlig\t\tGO:0003911\tPMID:15583169\tISS\t\tF\tDNA ligase\tligA|dnaL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1529\tlig\t\tGO:0006259\tPMID:15583169\tISS\t\tP\tDNA ligase\tligA|dnaL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1532\tdnaX\t\tGO:0030337\tPMID:7494000\tISS\t\tF\tDNA polymerase subunits gamma and tau\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1534\trecR\t\tGO:0000731\tPMID:9108043\tISS\t\tP\trecombination protein RecR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1534\trecR\t\tGO:0009411\tPMID:9108043\tISS\t\tP\trecombination protein RecR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1543\tapt\t\tGO:0003999\tPMID:4328693\tISS\t\tF\tadenine phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1543\tapt\t\tGO:0006168\tPMID:4328693\tISS\t\tP\tadenine phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1543\tapt\t\tGO:0005829\tPMID:16858726\tISS\t\tC\tadenine phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1543\tapt\t\tGO:0042802\tPMID:4328693\tISS\t\tF\tadenine phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1543\tapt\t\tGO:0000287\tPMID:4328693\tISS\t\tF\tadenine phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1581\tsdhC\t\tGO:0008177\tPMID:9822661\tISS\t\tF\tsuccinate dehydrogenase (C subunit)\tcybA|succinate dehydrogenase (cytochrome b-556 subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1581\tsdhC\t\tGO:0009055\tPMID:12788489\tISS\t\tF\tsuccinate dehydrogenase (C subunit)\tcybA|succinate dehydrogenase (cytochrome b-556 subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1581\tsdhC\t\tGO:0020037\tPMID:9521736\tISS\t\tF\tsuccinate dehydrogenase (C subunit)\tcybA|succinate dehydrogenase (cytochrome b-556 subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1581\tsdhC\t\tGO:0048039\tPMID:9822661\tISS\t\tF\tsuccinate dehydrogenase (C subunit)\tcybA|succinate dehydrogenase (cytochrome b-556 subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1581\tsdhC\t\tGO:0017004\tPMID:9521736\tISS\t\tP\tsuccinate dehydrogenase (C subunit)\tcybA|succinate dehydrogenase (cytochrome b-556 subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1582\tsdhD\t\tGO:0017004\tPMID:9521736\tISS\t\tP\tsuccinate dehydrogenase (D subunit)\tsuccinate dehydrogenase hydrophobic membrane anchor protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1582\tsdhD\t\tGO:0009055\tPMID:12788489\tISS\t\tF\tsuccinate dehydrogenase (D subunit)\tsuccinate dehydrogenase hydrophobic membrane anchor protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1582\tsdhD\t\tGO:0020037\tPMID:9521736\tISS\t\tF\tsuccinate dehydrogenase (D subunit)\tsuccinate dehydrogenase hydrophobic membrane anchor protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1583\tsdhA\t\tGO:0006099\tPMID:15543598\tISS\t\tP\tsuccinate dehydrogenase (A subunit)\tsuccinate dehydrogenase (flavoprotein subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1583\tsdhA\t\tGO:0009055\tPMID:12788489\tISS\t\tF\tsuccinate dehydrogenase (A subunit)\tsuccinate dehydrogenase (flavoprotein subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1583\tsdhA\t\tGO:0000104\tPMID:6383359\tISS\t\tF\tsuccinate dehydrogenase (A subunit)\tsuccinate dehydrogenase (flavoprotein subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1585\tsucA\t\tGO:0004591\tPMID:17367808\tISS\t\tF\t2-oxoglutarate dehydrogenase (E1 subunit)\talpha-ketoglutarate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1585\tsucA\t\tGO:0006099\tPMID:6284701\tISS\t\tP\t2-oxoglutarate dehydrogenase (E1 subunit)\talpha-ketoglutarate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1586\tsucB\t\tGO:0006099\tPMID:6284701\tISS\t\tP\tdihydrolipoamide succinyltransferase (E2 subunit)\t2-oxoglutarate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1586\tsucB\t\tGO:0004149\tPMID:5335914\tISS\t\tF\tdihydrolipoamide succinyltransferase (E2 subunit)\t2-oxoglutarate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1586\tsucB\t\tGO:0045252\tPMID:5335914\tISS\t\tC\tdihydrolipoamide succinyltransferase (E2 subunit)\t2-oxoglutarate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1609\tfabB\t\tGO:0004315\tPMID:7002930\tISS\t\tF\tbeta-ketoacyl-ACP synthase I\tFabB|KAS I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1610\tfabA\t\tGO:0008693\tPMID:8910376\tISS\t\tF\tbeta-hydroxydecanoyl-ACP dehydrase\tFabA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1614\tgpsA\t\tGO:0047952\tPMID:355254\tISS\t\tF\tglycerol-3-phosphate dehydrogenase, biosynthetic\tgpdA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1614\tgpsA\t\tGO:0046474\tPMID:4591941\tISS\t\tP\tglycerol-3-phosphate dehydrogenase, biosynthetic\tgpdA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1632\tkdpF\t\tGO:0031004\tPMID:9789555\tISS\t\tC\tKdpF protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1632\tkdpF\t\tGO:0008556\tPMID:9789555\tISS\t\tF\tKdpF protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1632\tkdpF\t\tGO:0006813\tPMID:9789555\tISS\t\tP\tKdpF protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1633\tkdpA\t\tGO:0031004\tPMID:9789555\tISS\t\tC\tpotassium-transporting ATPase, A chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1633\tkdpA\t\tGO:0008556\tPMID:9789555\tISS\t\tF\tpotassium-transporting ATPase, A chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1633\tkdpA\t\tGO:0006813\tPMID:9789555\tISS\t\tP\tpotassium-transporting ATPase, A chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1634\tkdpB\t\tGO:0031004\tPMID:9789555\tISS\t\tC\tpotassium-transporting ATPase, B chain\tatkB|P-type ATPase potassium ion transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1634\tkdpB\t\tGO:0008556\tPMID:9789555\tISS\t\tF\tpotassium-transporting ATPase, B chain\tatkB|P-type ATPase potassium ion transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1634\tkdpB\t\tGO:0006813\tPMID:9789555\tISS\t\tP\tpotassium-transporting ATPase, B chain\tatkB|P-type ATPase potassium ion transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1635\tkdpC\t\tGO:0031004\tPMID:9789555\tISS\t\tC\tpotassium-transporting ATPase, C chain\tatkC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1635\tkdpC\t\tGO:0008556\tPMID:9789555\tISS\t\tF\tpotassium-transporting ATPase, C chain\tatkC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1635\tkdpC\t\tGO:0006813\tPMID:9789555\tISS\t\tP\tpotassium-transporting ATPase, C chain\tatkC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1636\tkdpD\t\tGO:0000155\tPMID:8276778\tISS\t\tF\ttwo-component sensor KdpD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1636\tkdpD\t\tGO:0007234\tPMID:8276778\tISS\t\tP\ttwo-component sensor KdpD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1637\tkdpE\t\tGO:0000160\tPMID:8437514\tISS\t\tP\ttwo-component response regulator KdpE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1674\tfolE2\t\tGO:0008616\tPMID:18931107\tISS\t\tP\tGTP cyclohydrolase I precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1674\tfolE2\t\tGO:0003934\tPMID:8618856\tISS\t\tF\tGTP cyclohydrolase I precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1686\talkA\t\tGO:0003905\tPMID:7982966\tISS\t\tF\tDNA-3-methyladenine glycosidase II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1686\talkA\t\tGO:0006284\tPMID:7982966\tISS\t\tP\tDNA-3-methyladenine glycosidase II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1686\talkA\t\tGO:0006307\tPMID:3536857\tISS\t\tP\tDNA-3-methyladenine glycosidase II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1704\tpcrR\t\tGO:0006355\tPMID:1695896\tISS\t\tP\ttranscriptional regulator protein PcrR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1704\tpcrR\t\tGO:0071277\tPMID:1695896\tISS\t\tP\ttranscriptional regulator protein PcrR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1726\tbglX\t\tGO:0008422\tPMID:8757730\tISS\t\tF\tperiplasmic beta-glucosidase\tgentobiase|cellobiase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1726\tbglX\t\tGO:0015926\tPMID:8757730\tISS\t\tF\tperiplasmic beta-glucosidase\tgentobiase|cellobiase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1726\tbglX\t\tGO:0042597\tPMID:8757730\tISS\t\tC\tperiplasmic beta-glucosidase\tgentobiase|cellobiase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1750\tPA1750\t\tGO:0003849\tPMID:9387\tISS\t\tF\tphospho-2-dehydro-3-deoxyheptonate aldolase\t3-deoxy-d-arabino-heptulosonate 7-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1750\tPA1750\t\tGO:0042802\tPMID:9387\tISS\t\tF\tphospho-2-dehydro-3-deoxyheptonate aldolase\t3-deoxy-d-arabino-heptulosonate 7-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1770\tppsA\t\tGO:0004743\tPMID:1310524\tISS\t\tF\tphosphoenolpyruvate synthase\twater dikinase|PEP synthase|Pyruvate\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1779\tPA1779\t\tGO:0008940\tPMID:8468296\tISS\t\tF\tassimilatory nitrate reductase\tnasC|nasA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1781\tnirB\t\tGO:0009703\tPMID:11004182\tISS\t\tF\tassimilatory nitrite reductase large subunit\tnasD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1785\tnasT\t\tGO:0031564\tPMID:22493305\tISS\t\tP\tNasT\tnasT|NasT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1787\tacnB\t\tGO:0003994\tPMID:8000525\tISS\t\tF\taconitate hydratase 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1793\tppiB\t\tGO:0016859\tPMID:1606970\tISS\t\tF\tpeptidyl-prolyl cis-trans isomerase B\tcypB|PPIase B|Rotamase B\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1796\tfolD\t\tGO:0019238\tPMID:1748668\tISS\t\tF\t5,10-methylene-tetrahydrofolate dehydrogenase / cyclohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1796\tfolD\t\tGO:0003959\tPMID:1748668\tISS\t\tF\t5,10-methylene-tetrahydrofolate dehydrogenase / cyclohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1801\tclpP\t\tGO:0008233\tPMID:8831780\tISS\t\tF\tClpP\tprotease ti\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0004176\tPMID:8294008\tISS\t\tF\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1804\thupB\t\tGO:0008301\tPMID:2265752\tISS\t\tF\tDNA-binding protein HU\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1805\tppiD\t\tGO:0003755\tPMID:20920237\tISS\t\tF\tpeptidyl-prolyl cis-trans isomerase D\tPPIase D|Rotamase D\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1815\trnhA\t\tGO:0004523\tPMID:2171503\tISS\t\tF\tribonuclease H\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1816\tdnaQ\t\tGO:0043845\tPMID:9705512\tISS\t\tC\tDNA polymerase III, epsilon chain\tmutD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1820\tnhaB\t\tGO:0015385\tPMID:1317851\tISS\t\tF\tsodium/proton antiporter NhaB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1843\tmetH\t\tGO:0008705\tPMID:11479715\tISS\t\tF\tmethionine synthase\t5-methyltetrahydrofolate--homocysteine S-methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1861\tmodC\t\tGO:0015412\tPMID:8564363\tISS\t\tF\tmolybdenum transport protein ModC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1862\tmodB\t\tGO:0015098\tPMID:8564363\tISS\t\tF\tmolybdenum transport protein ModB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1863\tmodA\t\tGO:0030973\tPMID:8564363\tISS\t\tF\tmolybdate-binding periplasmic protein precursor ModA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1886\tpolB\t\tGO:0034061\tPMID:9079692\tISS\t\tF\tDNA polymerase II\tdinA|DNA-directed DNA polymerase II\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1911\tfemR\t\tGO:0016989\tPMID:18086184\tISS\t\tF\tsigma factor regulator, FemR\tfemR|sigma factor regulator, FemR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1912\tfemI\t\tGO:0038023\tPMID:18086184\tISS\t\tF\tECF sigma factor, FemI\tfemI|ECF sigma factor, FemI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1912\tfemI\t\tGO:0007166\tPMID:18086184\tISS\t\tP\tECF sigma factor, FemI\tfemI|ECF sigma factor, FemI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1927\tmetE\t\tGO:0003871\tPMID:1339288\tISS\t\tF\t5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase\tcobalamin-independent methionine synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1928\trimJ\t\tGO:0006473\tPMID:19352641\tISS\t\tP\tribosomal protein alanine acetyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1928\trimJ\t\tGO:0043687\tPMID:19352641\tISS\t\tP\tribosomal protein alanine acetyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1950\trbsK\t\tGO:0004747\tPMID:6327617\tISS\t\tF\tribokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1973\tpqqF\t\tGO:0018189\tPMID:7665488\tISS\t\tP\tpyrroloquinoline quinone biosynthesis protein F\tcoenzyme PQQ synthesis protein F\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1976\tercS'\t\tGO:0000155\tPMID:20093290\tISS\t\tF\tErcS'\tercS'|ErcS'\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1979\teraS\t\tGO:0000155\tPMID:12686116\tISS\t\tF\tsensor kinase, EraS\texaD|ExaD|eraS|sensor kinase, EraS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1979\teraS\t\tGO:0000155\tPMID:11158353\tISS\t\tF\tsensor kinase, EraS\texaD|ExaD|eraS|sensor kinase, EraS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1980\teraR\t\tGO:0000156\tPMID:11158353\tISS\t\tF\tresponse regulator EraR\texaE|ExaE|eraR|response regulator EraR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1980\teraR\t\tGO:0000156\tPMID:12686116\tISS\t\tF\tresponse regulator EraR\texaE|ExaE|eraR|response regulator EraR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1984\texaC\t\tGO:0004029\tPMID:10075429\tISS\t\tF\tNAD+ dependent aldehyde dehydrogenase ExaC\texaC1|exaC|NAD+ dependent aldehyde dehydrogenase ExaC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1992\tercS\t\tGO:0000155\tPMID:20093290\tISS\t\tF\tErcS\tercS|ErcS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1996\tppiC1\t\tGO:0000413\tPMID:8163020\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase C1\tParvulin, PPIase C|Rotamase C\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2007\tmaiA\t\tGO:0016034\tPMID:9417084\tISS\t\tF\tmaleylacetoacetate isomerase\tglutathione transferase zeta 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2007\tmaiA\t\tGO:0006559\tPMID:9417084\tISS\t\tP\tmaleylacetoacetate isomerase\tglutathione transferase zeta 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2008\tfahA\t\tGO:0004334\tPMID:8364576\tISS\t\tF\tfumarylacetoacetase\tfumarylacetoacetate hydrolase|beta-diketonase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2008\tfahA\t\tGO:0006572\tPMID:8364576\tISS\t\tP\tfumarylacetoacetase\tfumarylacetoacetate hydrolase|beta-diketonase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2009\thmgA\t\tGO:0004411\tPMID:7673153\tISS\t\tF\thomogentisate 1,2-dioxygenase\thomogentisicase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2009\thmgA\t\tGO:0006559\tPMID:7673153\tISS\t\tP\thomogentisate 1,2-dioxygenase\thomogentisicase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2016\tliuR\t\tGO:0006351\tPMID:18820024\tISS\t\tP\tregulator of liu genes\tgnyR|GnyR|liuR|regulator of liu genes|Regulatory gene of gnyRDBHAL cluster, GnyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2016\tliuR\t\tGO:0006521\tPMID:18820024\tISS\t\tP\tregulator of liu genes\tgnyR|GnyR|liuR|regulator of liu genes|Regulatory gene of gnyRDBHAL cluster, GnyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2023\tgalU\t\tGO:0003983\tPMID:7499387\tISS\t\tF\tUTP--glucose-1-phosphate uridylyltransferase\tgtaB|hasC|glucose-1-phosphate uridylyltransferase|UDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2041\tPA2041\t\tGO:0009447\tPMID:23719730\tISS\t\tP\tAmino acid permease\tAmino acid permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2051\tPA2051\t\tGO:0016989\tPMID:18086184\tISS\t\tF\tprobable transmembrane sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2052\tcynS\t\tGO:0008824\tPMID:2822670\tISS\t\tF\tcyanate lyase\tcyanate hydrolase|cyanase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2053\tcynT\t\tGO:0004089\tPMID:1740425\tISS\t\tF\tcarbonate dehydratase\tcarbonic anhydrase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2057\tsppR\t\tGO:0038023\tPMID:18086184\tISS\t\tF\tTonB-dependent receptor, SppR\tsppR|TonB-dependent receptor, SppR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2057\tsppR\t\tGO:0007166\tPMID:18086184\tISS\t\tP\tTonB-dependent receptor, SppR\tsppR|TonB-dependent receptor, SppR|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2064\tpcoB\t\tGO:0005375\tPMID:1924351\tISS\t\tF\tcopper resistance protein B precursor\tcopB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2065\tpcoA\t\tGO:0005507\tPMID:8594334\tISS\t\tF\tcopper resistance protein A precursor\tcopA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2070\tPA2070\t\tGO:0038023\tPMID:18086184\tISS\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2070\tPA2070\t\tGO:0007166\tPMID:18086184\tISS\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2071\tfusA2\t\tGO:0003746\tPMID:6322136\tISS\t\tF\telongation factor G\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2082\tkynR\t\tGO:0030429\tPMID:9628740\tISS\t\tF\tKynR\tKynR|kynR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2089\tPA2089\t\tGO:0038023\tPMID:18086184\tISS\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2089\tPA2089\t\tGO:0007166\tPMID:18086184\tISS\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2094\tPA2094\t\tGO:0016989\tPMID:18086184\tISS\t\tF\tprobable transmembrane sensor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2118\tada\t\tGO:0008168\tPMID:2987251\tISS\t\tF\tO6-methylguanine-DNA methyltransferase\ttranscriptional regulator Ada\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2119\tPA2119\t\tGO:0003824\tPMID:2144274\tISS\t\tF\talcohol dehydrogenase (Zn-dependent)\tadh\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2130\tcupA3\t\tGO:0015473\tPMID:11381121\tISS\t\tF\tusher CupA3\tprobable fimbrial biogenesis usher protein|cupA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2144\tglgP\t\tGO:0044042\tPMID:3047129\tISS\t\tP\tglycogen phosphorylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2147\tkatE\t\tGO:0004096\tPMID:1987146\tISS\t\tF\tcatalase HPII\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2153\tglgB\t\tGO:0003844\tPMID:3013861\tISS\t\tF\t1,4-alpha-glucan branching enzyme\tglycogen branching enzyme\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2247\tbkdA1\t\tGO:0043436\tPMID:3416875\tISS\t\tP\t2-oxoisovalerate dehydrogenase (alpha subunit)\tbranched-chain alpha-keto acid decarboxylase|3-methyl-2-oxobutanoate dehydrogenase (lipoamide)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2248\tbkdA2\t\tGO:0043436\tPMID:3416875\tISS\t\tP\t2-oxoisovalerate dehydrogenase (beta subunit)\tbranched-chain alpha-keto acid decarboxylase|3-methyl-2-oxobutanoate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2249\tbkdB\t\tGO:0043436\tPMID:3046941\tISS\t\tP\tbranched-chain alpha-keto acid dehydrogenase (lipoamide component)\tdihydrolipoamide branched chain transacylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2250\tlpdV\t\tGO:0043436\tPMID:2917566\tISS\t\tP\tlipoamide dehydrogenase-Val\tlipoamide dehydrogenase (E3 subunit)|Lpd-Val\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2250\tlpdV\t\tGO:0006520\tPMID:2917566\tISS\t\tP\tlipoamide dehydrogenase-Val\tlipoamide dehydrogenase (E3 subunit)|Lpd-Val\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2278\tarsB\t\tGO:0046685\tPMID:9802012\tISS\t\tP\tArsB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2279\tarsC\t\tGO:0046685\tPMID:9802012\tISS\t\tP\tArsC protein\tarsenate reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2290\tgcd\t\tGO:0006091\tPMID:8419307\tISS\t\tP\tglucose dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2290\tgcd\t\tGO:0004344\tPMID:8419307\tISS\t\tF\tglucose dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2290\tgcd\t\tGO:0044248\tPMID:8419307\tISS\t\tP\tglucose dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2321\tgntK\t\tGO:0004340\tPMID:8655507\tISS\t\tF\tGntK\tgntV|gntK|gnuK|gluconate kinase|GntK|gluconokinase|gluconokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2322\tgntP\t\tGO:0015725\tPMID:9045817\tISS\t\tP\tGntP\tgntU|gntT|gnuT|gntP|GntP|gluconate permease|gluconate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0002049\tPMID:12686626\tISS\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2387\tfpvI\t\tGO:0016987\tPMID:16077110\tISS\t\tF\tFpvI\tfpvI|FpvI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2392\tpvdP\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tPvdP\tpvdP|PvdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2393\tPA2393\t\tGO:0016805\tPMID:15687295\tISS\t\tF\tputative dipeptidase\tputative dipeptidase|probable dipeptidase precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2393\tPA2393\t\tGO:0016805\tPMID:1313537\tISS\t\tF\tputative dipeptidase\tputative dipeptidase|probable dipeptidase precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2393\tPA2393\t\tGO:0016805\tPMID:12207696\tISS\t\tF\tputative dipeptidase\tputative dipeptidase|probable dipeptidase precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2394\tpvdN\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tPvdN\tpvdN|PvdN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2394\tpvdN\t\tGO:0008483\tPMID:12207696\tISS\t\tF\tPvdN\tpvdN|PvdN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2397\tpvdE\t\tGO:0042626\tPMID:8918232\tISS\t\tF\tpyoverdine biosynthesis protein PvdE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2398\tfpvA\t\tGO:0038023\tPMID:8335619\tISS\t\tF\tferripyoverdine receptor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2400\tpvdJ\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tPvdJ\tPA2401|PvdJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2412\tPA2412\t\tGO:0016790\tPMID:12207696\tISS\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2413\tpvdH\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tL-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tpvdH|L-2,4-diaminobutyrate:2-ketoglutarate 4-aminotransferase, PvdH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2424\tpvdL\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tPvdL\tpvdL|PvdL\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2425\tpvdG\t\tGO:0002049\tPMID:12686626\tISS\t\tP\tPvdG\tpvdG|PvdG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2426\tpvdS\t\tGO:0016987\tPMID:16077110\tISS\t\tF\tsigma factor PvdS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2442\tgcvT2\t\tGO:0004047\tPMID:8188235\tISS\t\tF\tglycine cleavage system protein T2\taminomethyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2443\tsdaA\t\tGO:0003941\tPMID:2504697\tISS\t\tF\tL-serine dehydratase\tL-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2468\tfoxI\t\tGO:0016987\tPMID:16484199\tISS\t\tF\tECF sigma factor FoxI\tfoxI|ECF sigma factor FoxI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2509\tcatB\t\tGO:0043639\tPMID:3609743\tISS\t\tP\tmuconate cycloisomerase I\tcis|cis-muconate lactonizing enzyme I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2509\tcatB\t\tGO:0044248\tPMID:3609743\tISS\t\tP\tmuconate cycloisomerase I\tcis|cis-muconate lactonizing enzyme I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2516\txylZ\t\tGO:0006091\tPMID:1938949\tISS\t\tP\ttoluate 1,2-dioxygenase electron transfer component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2516\txylZ\t\tGO:0018623\tPMID:1938949\tISS\t\tF\ttoluate 1,2-dioxygenase electron transfer component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2516\txylZ\t\tGO:0044248\tPMID:1938949\tISS\t\tP\ttoluate 1,2-dioxygenase electron transfer component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2519\txylS\t\tGO:1901434\tPMID:8473862\tISS\t\tP\ttranscriptional regulator XylS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2523\tczcR\t\tGO:0000156\tPMID:10570969\tISS\t\tF\tCzcR\tCzcR|czcR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2524\tczcS\t\tGO:0000155\tPMID:10570969\tISS\t\tF\tCzcS\tCzcS|czcS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2545\txthA\t\tGO:0008853\tPMID:7885481\tISS\t\tF\texodeoxyribonuclease III\texonuclease III\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2579\tkynA\t\tGO:0004833\tPMID:14592712\tISS\t\tF\tL-Tryptophan:oxygen 2,3-oxidoreductase (decyclizing) KynA\tL-Tryptophan:oxygen 2,3-oxidoreductase (decyclizing) KynA|kynA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2584\tpgsA\t\tGO:0008444\tPMID:3003065\tISS\t\tF\tCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase\tphosphatidylglycerophosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2585\tuvrC\t\tGO:0033683\tPMID:2843804\tISS\t\tP\texcinuclease ABC subunit C\tUvrABC endonuclease subunit C|UvrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2586\tgacA\t\tGO:0000156\tPMID:7604262\tISS\t\tF\tresponse regulator GacA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2590\tPA2590\t\tGO:0038023\tPMID:18086184\tISS\t\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2590\tPA2590\t\tGO:0007166\tPMID:18086184\tISS\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2611\tcysG\t\tGO:0004851\tPMID:2407234\tISS\t\tF\tsiroheme synthase\turoporphyrinogen III methylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2612\tserS\t\tGO:0006520\tPMID:7537870\tISS\t\tP\tseryl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2612\tserS\t\tGO:0004828\tPMID:7537870\tISS\t\tF\tseryl-tRNA synthetase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2619\tinfA\t\tGO:0003743\tPMID:9135158\tISS\t\tF\tinitiation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2620\tclpA\t\tGO:0006508\tPMID:2185473\tISS\t\tP\tATP-binding protease component ClpA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2623\ticd\t\tGO:0004739\tPMID:2682654\tISS\t\tF\tisocitrate dehydrogenase\ticdA|oxalosuccinate decarboxylase|IDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2623\ticd\t\tGO:0006091\tPMID:2682654\tISS\t\tP\tisocitrate dehydrogenase\ticdA|oxalosuccinate decarboxylase|IDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2623\ticd\t\tGO:0006520\tPMID:2682654\tISS\t\tP\tisocitrate dehydrogenase\ticdA|oxalosuccinate decarboxylase|IDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2623\ticd\t\tGO:0015976\tPMID:2682654\tISS\t\tP\tisocitrate dehydrogenase\ticdA|oxalosuccinate decarboxylase|IDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2623\ticd\t\tGO:0044248\tPMID:2682654\tISS\t\tP\tisocitrate dehydrogenase\ticdA|oxalosuccinate decarboxylase|IDH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2626\ttrmU\t\tGO:0030488\tPMID:9811540\tISS\t\tP\ttRNA methyltransferase\tasuE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2686\tpfeR\t\tGO:0000156\tPMID:8361354\tISS\t\tF\ttwo-component response regulator PfeR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2687\tpfeS\t\tGO:0000155\tPMID:8361354\tISS\t\tF\ttwo-component sensor PfeS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2694\ttrx2\t\tGO:0015036\tPMID:23771858\tISS\t\tF\tTrx2\tTrx2|trx2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2709\tcysK\t\tGO:0004124\tPMID:3062311\tISS\t\tF\tcysteine synthase A\tO-acetylserine sulfhydrolase A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2717\tcpo\t\tGO:0016691\tPMID:8344520\tISS\t\tF\tchloroperoxidase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2738\thimA\t\tGO:0006355\tPMID:7867950\tISS\t\tP\tintegration host factor, alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2738\thimA\t\tGO:0044267\tPMID:7867950\tISS\t\tP\tintegration host factor, alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2742\trpmI\t\tGO:0006412\tPMID:3298224\tISS\t\tP\t50S ribosomal protein L35\tRibosomal protein A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2749\tendA\t\tGO:0004536\tPMID:1452026\tISS\t\tF\tDNA-specific endonuclease I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2787\tcpg2\t\tGO:0046657\tPMID:3838935\tISS\t\tP\tcarboxypeptidase G2 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2796\ttal\t\tGO:0016744\tPMID:7592346\tISS\t\tF\ttransaldolase\tdihydroxyacetone transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2796\ttal\t\tGO:0015976\tPMID:7592346\tISS\t\tP\ttransaldolase\tdihydroxyacetone transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2796\ttal\t\tGO:0044248\tPMID:7592346\tISS\t\tP\ttransaldolase\tdihydroxyacetone transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2809\tcopR\t\tGO:0000156\tPMID:17449606\tISS\t\tF\ttwo-component response regulator, CopR\tcopR| two-component response regulator, CopR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2810\tcopS\t\tGO:0000155\tPMID:17449606\tISS\t\tF\ttwo-component sensor, CopS\tcopS| two-component sensor, CopS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2827\tPA2827\t\tGO:0008113\tPMID:23687271\tISS\t\tF\tconserved hypothetical protein\tyeaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2854\tPA2854\t\tGO:0071972\tPMID:17369299\tISS\t\tF\tconserved hypothetical protein\terfK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2854\tPA2854\t\tGO:0008234\tPMID:19965429\tISS\t\tF\tconserved hypothetical protein\terfK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2856\ttesA\t\tGO:0047617\tPMID:8098033\tISS\t\tF\tlysophospholipase A\tapeA|lecithinase B|lysophospholipase L1|lysophospholipase A|TesA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2866\tmttC\t\tGO:0035473\tPMID:7946464\tISS\t\tF\tsecretion protein MttC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2876\tpyrF\t\tGO:0006221\tPMID:2956254\tISS\t\tP\torotidine 5'-phosphate decarboxylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2903\tcobJ\t\tGO:0009236\tPMID:8226690\tISS\t\tP\tprecorrin-3 methylase CobJ\tcbiH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2905\tcobH\t\tGO:0009236\tPMID:1732194\tISS\t\tP\tprecorrin isomerase CobH\tcbiC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2907\tcobL\t\tGO:0009236\tPMID:1732195\tISS\t\tP\tprecorrin-6y-dependent methyltransferase CobL\tcbiT|cbiE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2908\tcbiD\t\tGO:0009236\tPMID:9742226\tISS\t\tP\tcobalamin biosynthetic protein CbiD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2924\thisQ\t\tGO:0015817\tPMID:1733937\tISS\t\tP\thistidine transport system permease HisQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2924\thisQ\t\tGO:0006810\tPMID:1733937\tISS\t\tP\thistidine transport system permease HisQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2924\thisQ\t\tGO:0016020\tPMID:1733937\tISS\t\tC\thistidine transport system permease HisQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2961\tholB\t\tGO:0009360\tPMID:8509334\tISS\t\tC\tDNA polymerase III, delta prime subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2965\tfabF1\t\tGO:0006633\tPMID:9013860\tISS\t\tP\tbeta-ketoacyl-acyl carrier protein synthase II\tFabF protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2966\tacpP\t\tGO:0006633\tPMID:1556094\tISS\t\tP\tacyl carrier protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2969\tplsX\t\tGO:0006633\tPMID:24224907\tISS\t\tP\tfatty acid biosynthesis protein PlsX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2970\trpmF\t\tGO:0006412\tPMID:2477362\tISS\t\tP\t50S ribosomal protein L32\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2978\tptpA\t\tGO:0006468\tPMID:8550407\tISS\t\tP\tphosphotyrosine protein phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3005\tnagZ\t\tGO:0016998\tPMID:10940025\tISS\t\tP\tbeta-N-acetyl-D-glucosaminidase\tycfO\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3007\tlexA\t\tGO:0009432\tPMID:7027255\tISS\t\tP\trepressor protein LexA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3011\ttopA\t\tGO:0003916\tPMID:7779808\tISS\t\tF\tDNA topoisomerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3028\tmoeA2\t\tGO:0006777\tPMID:9515915\tISS\t\tP\tmolybdenum cofactor biosynthesis protein A2\tmolybdopterin biosynthetic protein MoeA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3044\trocsS2\t\tGO:0000155\tPMID:15659157\tISS\t\tF\tTwo-component sensor RocS2\tTwo-component sensor RocS2|rocsS2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3045\trocA2\t\tGO:0000156\tPMID:15659157\tISS\t\tF\tTwo-component response regulator, RocA2\tTwo-component response regulator, RocA2|rocA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3047\tPA3047\t\tGO:0042597\tPMID:18266856\tISS\t\tC\tprobable D-alanyl-D-alanine carboxypeptidase\tdacB|probable penicillin-binding protein 4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3049\trmf\t\tGO:0017148\tPMID:2181444\tISS\t\tP\tribosome modulation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3063\tpelB\t\tGO:0015774\tPMID:20159471\tISS\t\tP\tPelB\tPelB|pelB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3077\tcprR\t\tGO:0000156\tPMID:23006746\tISS\t\tF\tCprR\tcationic peptide resistance regulator|cprR|CprR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3078\tcprS\t\tGO:0000155\tPMID:23006746\tISS\t\tF\tCprS\tcationic peptide resistance sensor|cprS|CprS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3083\tpepN\t\tGO:0008233\tPMID:3018440\tISS\t\tF\taminopeptidase N\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3113\ttrpF\t\tGO:0000162\tPMID:2299982\tISS\t\tP\tN-(5'phosphoribosyl)anthranilate (PRA) isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3113\ttrpF\t\tGO:0008881\tPMID:2299982\tISS\t\tF\tN-(5'phosphoribosyl)anthranilate (PRA) isomerase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3142\tPA3142\t\tGO:0016757\tPMID:9680202\tISS\t\tF\tintegrase\tintegrase|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3143\tPA3143\t\tGO:0016757\tPMID:9680202\tISS\t\tF\ttransposase\ttransposase|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3144\tPA3144\t\tGO:0016757\tPMID:9680202\tISS\t\tF\ttransposase with Helix-turn-helix Hin domain\ttransposase with Helix-turn-helix Hin domain|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3145\twbpL\t\tGO:0016757\tPMID:9680202\tISS\t\tF\tglycosyltransferase WbpL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3161\thimD\t\tGO:0006259\tPMID:8892836\tISS\t\tP\tintegration host factor beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3161\thimD\t\tGO:0016070\tPMID:8892836\tISS\t\tP\tintegration host factor beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3161\thimD\t\tGO:0044267\tPMID:8892836\tISS\t\tP\tintegration host factor beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3162\trpsA\t\tGO:0006412\tPMID:9677288\tISS\t\tP\t30S ribosomal protein S1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3163\tcmk\t\tGO:0009117\tPMID:7836281\tISS\t\tP\tcytidylate kinase\tcytidine monophosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3165\thisC2\t\tGO:0000105\tPMID:22232166\tISS\t\tP\thistidinol-phosphate aminotransferase\timidazole acetol-phosphate transaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3166\tpheA\t\tGO:0009094\tPMID:1919506\tISS\t\tP\tchorismate mutase\tprephenate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3167\tserC\t\tGO:0009070\tPMID:8706854\tISS\t\tP\t3-phosphoserine aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3167\tserC\t\tGO:0008615\tPMID:8706854\tISS\t\tP\t3-phosphoserine aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3176\tgltS\t\tGO:0005313\tPMID:20557112\tISS\t\tF\tglutamate/sodium ion symporter, GltS\tglutamate/sodium ion symporter, GltS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3191\tgtrS\t\tGO:0000155\tPMID:8830708\tISS\t\tF\tglucose transport sensor, GtrS\tglucose transport sensor, GtrS|gtrS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3192\tgltR\t\tGO:0000156\tPMID:8830708\tISS\t\tF\ttwo-component response regulator GltR\tTranscriptional regulator GltR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3223\tazoR3\t\tGO:0050446\tPMID:20417637\tISS\t\tF\tAzoR3, azoreductase 3\tazoR3|AzoR3, azoreductase 3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3227\tppiA\t\tGO:0003755\tPMID:2007139\tISS\t\tF\tpeptidyl-prolyl cis-trans isomerase A\tcypH|Rotamase A, PPIase A|Cyclophilin A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3227\tppiA\t\tGO:0044267\tPMID:2007139\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase A\tcypH|Rotamase A, PPIase A|Cyclophilin A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3257\talgO\t\tGO:0042493\tPMID:1447154\tISS\t\tP\tAlgO\ttsp|algO|prc|AlgO|periplasmic tail-specific protease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3296\tphoA\t\tGO:0004035\tPMID:2129542\tISS\t\tF\talkaline phosphatase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3308\thepA\t\tGO:0004386\tPMID:9614128\tISS\t\tF\tRNA helicase HepA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3344\trecQ\t\tGO:0004386\tPMID:2164680\tISS\t\tF\tATP-dependent DNA helicase RecQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3344\trecQ\t\tGO:0008094\tPMID:2164680\tISS\t\tF\tATP-dependent DNA helicase RecQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3357\tdsdA\t\tGO:0031363\tPMID:3053699\tISS\t\tP\tD-serine dehydratase\tD-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3382\tphnE\t\tGO:0006810\tPMID:2155230\tISS\t\tP\tphosphonate transport protein PhnE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3382\tphnE\t\tGO:0019634\tPMID:2155230\tISS\t\tP\tphosphonate transport protein PhnE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3391\tnosR\t\tGO:0006091\tPMID:1644760\tISS\t\tP\tregulatory protein NosR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3391\tnosR\t\tGO:0019333\tPMID:1644760\tISS\t\tP\tregulatory protein NosR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3392\tnosZ\t\tGO:0019333\tPMID:2170125\tISS\t\tP\tnitrous-oxide reductase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3397\tfprA\t\tGO:0042167\tPMID:17915950\tISS\t\tP\tFprA\tNADPH:ferredoxin reductase|NADP+-dependent ferredoxin reductase|FPR|fprA|fpr|FprA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3397\tfprA\t\tGO:0006091\tPMID:17915950\tISS\t\tP\tFprA\tNADPH:ferredoxin reductase|NADP+-dependent ferredoxin reductase|FPR|fprA|fpr|FprA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3406\thasD\t\tGO:0006810\tPMID:9244262\tISS\t\tP\ttransport protein HasD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3406\thasD\t\tGO:0015439\tPMID:9244262\tISS\t\tF\ttransport protein HasD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3418\tldh\t\tGO:0050049\tPMID:1400267\tISS\t\tF\tleucine dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3438\tfolE1\t\tGO:0006729\tPMID:1985963\tISS\t\tP\tGTP cyclohydrolase I precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3452\tmqoA\t\tGO:0006091\tPMID:9660197\tISS\t\tP\tmalate:quinone oxidoreductase\tmalate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3452\tmqoA\t\tGO:0006099\tPMID:9660197\tISS\t\tP\tmalate:quinone oxidoreductase\tmalate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3495\tnth\t\tGO:0004519\tPMID:2669955\tISS\t\tF\tendonuclease III\tDNA lyase|deoxyribonuclease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3524\tgloA1\t\tGO:0019243\tPMID:15270717\tISS\t\tP\tlactoylglutathione lyase\tS-D-lactoylglutathione methylglyoxal lyase|ketone-aldehyde mutase|aldoketomutase|glyoxalase I|methylglyoxalase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3527\tpyrC\t\tGO:0006221\tPMID:2885307\tISS\t\tP\tdihydroorotase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3528\trnt\t\tGO:0004532\tPMID:1704882\tISS\t\tF\tribonuclease T\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3528\trnt\t\tGO:0016070\tPMID:1704882\tISS\t\tP\tribonuclease T\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3541\talg8\t\tGO:0042121\tPMID:8294014\tISS\t\tP\talginate biosynthesis protein Alg8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3541\talg8\t\tGO:0050896\tPMID:8294014\tISS\t\tP\talginate biosynthesis protein Alg8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3544\talgE\t\tGO:0016020\tPMID:1743507\tISS\t\tC\tAlginate production outer membrane protein AlgE precursor\talg76|alginate production protein AlgE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3544\talgE\t\tGO:0042121\tPMID:1743507\tISS\t\tP\tAlginate production outer membrane protein AlgE precursor\talg76|alginate production protein AlgE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3544\talgE\t\tGO:0050896\tPMID:10411261\tISS\t\tP\tAlginate production outer membrane protein AlgE precursor\talg76|alginate production protein AlgE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3552\tarnB\t\tGO:1901760\tPMID:12704196\tISS\t\tP\tArnB\tpmrH|arnB|ArnB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3553\tarnC\t\tGO:1901760\tPMID:15695810\tISS\t\tP\tArnC\tpmrF|arnC|ArnC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3554\tarnA\t\tGO:1901760\tPMID:15695810\tISS\t\tP\tArnA\tPmrI|arnA|ArnA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3555\tarnD\t\tGO:1901760\tPMID:15695810\tISS\t\tP\tArnD\tamrJ|arnD|ArnD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3556\tarnT\t\tGO:1901760\tPMID:11535604\tISS\t\tP\tinner membrane L-Ara4N transferase ArnT\tpqaB|pmrK|arnT|inner membrane L-Ara4N transferase ArnT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3556\tarnT\t\tGO:0009276\tPMID:11535604\tISS\t\tC\tinner membrane L-Ara4N transferase ArnT\tpqaB|pmrK|arnT|inner membrane L-Ara4N transferase ArnT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3556\tarnT\t\tGO:0016020\tPMID:11535604\tISS\t\tC\tinner membrane L-Ara4N transferase ArnT\tpqaB|pmrK|arnT|inner membrane L-Ara4N transferase ArnT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3556\tarnT\t\tGO:0046677\tPMID:11535604\tISS\t\tP\tinner membrane L-Ara4N transferase ArnT\tpqaB|pmrK|arnT|inner membrane L-Ara4N transferase ArnT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3557\tarnE\t\tGO:1901760\tPMID:17928292\tISS\t\tP\tArnE\tpmrL|arnE|ArnE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3558\tarnF\t\tGO:1901760\tPMID:17928292\tISS\t\tP\tArnF\tpmrM|arnF|ArnF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3563\tfruR\t\tGO:0006355\tPMID:9237914\tISS\t\tP\tfructose transport system repressor FruR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3563\tfruR\t\tGO:0006810\tPMID:9237914\tISS\t\tP\tfructose transport system repressor FruR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3563\tfruR\t\tGO:0015976\tPMID:9237914\tISS\t\tP\tfructose transport system repressor FruR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3563\tfruR\t\tGO:0044248\tPMID:9237914\tISS\t\tP\tfructose transport system repressor FruR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3604\terdR\t\tGO:0000156\tPMID:20093290\tISS\t\tF\tresponse regulator ErdR\tErdR|response regulator ErdR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3607\tpotA\t\tGO:0015847\tPMID:8416922\tISS\t\tP\tpolyamine transport protein PotA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3608\tpotB\t\tGO:0015847\tPMID:8416922\tISS\t\tP\tpolyamine transport protein PotB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3609\tpotC\t\tGO:0015847\tPMID:8416922\tISS\t\tP\tpolyamine transport protein PotC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3610\tpotD\t\tGO:0015847\tPMID:8416922\tISS\t\tP\tpolyamine transport protein PotD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3617\trecA\t\tGO:0006281\tPMID:2823059\tISS\t\tP\tRecA protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3620\tmutS\t\tGO:0006281\tPMID:1651234\tISS\t\tP\tDNA mismatch repair protein MutS\tfdv\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3622\trpoS\t\tGO:0016987\tPMID:7959068\tISS\t\tF\tsigma factor RpoS\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3624\tpcm\t\tGO:0044267\tPMID:9573145\tISS\t\tP\tL-isoaspartate protein carboxylmethyltransferase type II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3624\tpcm\t\tGO:0030091\tPMID:9573145\tISS\t\tP\tL-isoaspartate protein carboxylmethyltransferase type II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3625\tsurE\t\tGO:0030091\tPMID:9785447\tISS\t\tP\tsurvival protein SurE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3635\teno\t\tGO:0006091\tPMID:8988374\tISS\t\tP\tenolase\tphosphopyruvate hydratase|2-phosphoglycerate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3635\teno\t\tGO:0015976\tPMID:8988374\tISS\t\tP\tenolase\tphosphopyruvate hydratase|2-phosphoglycerate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3635\teno\t\tGO:0044248\tPMID:8988374\tISS\t\tP\tenolase\tphosphopyruvate hydratase|2-phosphoglycerate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3635\teno\t\tGO:0044267\tPMID:8988374\tISS\t\tP\tenolase\tphosphopyruvate hydratase|2-phosphoglycerate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3637\tpyrG\t\tGO:0009117\tPMID:3298209\tISS\t\tP\tCTP synthase\tUTP--ammonia ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3640\tdnaE\t\tGO:0034061\tPMID:8375647\tISS\t\tF\tDNA polymerase III, alpha chain\tpolC|DNA nucleotidyltransferase (DNA-directed)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3643\tlpxB\t\tGO:0009103\tPMID:3531165\tISS\t\tP\tlipid A-disaccharide synthase\tpgsB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3645\tfabZ\t\tGO:0006633\tPMID:8805534\tISS\t\tP\t(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase\tsefA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3645\tfabZ\t\tGO:0044255\tPMID:8805534\tISS\t\tP\t(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase\tsefA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3646\tlpxD\t\tGO:0016746\tPMID:8293817\tISS\t\tF\tUDP-3-O-[3-hydroxylauroyl] glucosamine N-acyltransferase\tomsA|firA|FirA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3649\tmucP\t\tGO:0005886\tPMID:21036998\tISS\t\tC\tMucP\trseP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3651\tcdsA\t\tGO:0004605\tPMID:2995359\tISS\t\tF\tphosphatidate cytidylyltransferase\tCDP-diglyceride pyrophosphorylase|CDP-diacylglycerol synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3654\tpyrH\t\tGO:0033862\tPMID:7711027\tISS\t\tF\turidylate kinase\tsmbA|uridine monophosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3655\ttsf\t\tGO:0003746\tPMID:8596629\tISS\t\tF\telongation factor Ts\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3656\trpsB\t\tGO:0003735\tPMID:2459390\tISS\t\tF\t30S ribosomal protein S2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3657\tmap\t\tGO:0004177\tPMID:2651123\tISS\t\tF\tmethionine aminopeptidase\tMAP|peptidase M\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3658\tglnD\t\tGO:0070569\tPMID:1683868\tISS\t\tF\tprotein-PII uridylyltransferase\tnfrX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0060309\tPMID:2842313\tISS\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3725\trecJ\t\tGO:0004518\tPMID:2649886\tISS\t\tF\tsingle-stranded-DNA-specific exonuclease RecJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3737\tdsbC\t\tGO:0006457\tPMID:7536035\tISS\t\tP\tthiol:disulfide interchange protein DsbC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3737\tdsbC\t\tGO:0044267\tPMID:7536035\tISS\t\tP\tthiol:disulfide interchange protein DsbC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3742\trplS\t\tGO:0044391\tPMID:6423642\tISS\t\tC\t50S ribosomal protein L19\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3743\ttrmD\t\tGO:0030488\tPMID:6337136\tISS\t\tP\ttRNA (guanine-N1)-methyltransferase\tTrmD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3744\trimM\t\tGO:0044391\tPMID:9422595\tISS\t\tC\t16S rRNA processing protein\tRimM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3745\trpsP\t\tGO:0044391\tPMID:9288907\tISS\t\tC\t30S ribosomal protein S16\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3745\trpsP\t\tGO:0004530\tPMID:9288907\tISS\t\tF\t30S ribosomal protein S16\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3746\tffh\t\tGO:0046903\tPMID:8898086\tISS\t\tP\tsignal recognition particle protein Ffh\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3769\tguaA\t\tGO:0006177\tPMID:3894345\tISS\t\tP\tGMP synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3777\txseA\t\tGO:0008855\tPMID:3021756\tISS\t\tF\texodeoxyribonuclease VII large subunit\tExonuclease VII\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3809\tfdx2\t\tGO:0006124\tPMID:1317854\tISS\t\tP\tferredoxin [2Fe-2S]\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3810\thscA\t\tGO:0006457\tPMID:8300516\tISS\t\tP\theat shock protein HscA\tHsc66\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3811\thscB\t\tGO:0006457\tPMID:21269500\tISS\t\tP\theat shock protein HscB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3816\tcysE\t\tGO:0016746\tPMID:7510287\tISS\t\tF\tO-acetylserine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3820\tsecF\t\tGO:0046903\tPMID:8112309\tISS\t\tP\tsecretion protein SecF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3821\tsecD\t\tGO:0009306\tPMID:8313900\tISS\t\tP\tsecretion protein SecD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3821\tsecD\t\tGO:0046903\tPMID:8313900\tISS\t\tP\tsecretion protein SecD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3823\ttgt\t\tGO:0008479\tPMID:1706703\tISS\t\tF\tqueuine tRNA-ribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3823\ttgt\t\tGO:0044267\tPMID:1706703\tISS\t\tP\tqueuine tRNA-ribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3831\tpepA\t\tGO:0008238\tPMID:8057849\tISS\t\tF\tleucine aminopeptidase\tcarP|xerB|phpA|Aminopeptidase A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3832\tholC\t\tGO:0009360\tPMID:8389364\tISS\t\tC\tDNA polymerase III, chi subunit\tHolC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3872\tnarI\t\tGO:0009325\tPMID:3053688\tISS\t\tC\trespiratory nitrate reductase gamma chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3873\tnarJ\t\tGO:0009325\tPMID:3053688\tISS\t\tC\trespiratory nitrate reductase delta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3901\tfecA\t\tGO:0008199\tPMID:8471824\tISS\t\tF\tFe(III) dicitrate transport protein FecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3901\tfecA\t\tGO:0015682\tPMID:8471824\tISS\t\tP\tFe(III) dicitrate transport protein FecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3916\tmoaE\t\tGO:0032324\tPMID:12571226\tISS\t\tP\tmolybdopterin converting factor, large subunit\tmolybdopterin biosynthetic protein E\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3917\tmoaD\t\tGO:0032324\tPMID:12571226\tISS\t\tP\tmolybdopterin converting factor, small subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3946\trocS1\t\tGO:0000155\tPMID:15659157\tISS\t\tF\ttwo-component sensor RocS1\trocS1|two-component sensor RocS1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3948\trocA1\t\tGO:0000156\tPMID:15659157\tISS\t\tF\tTwo-component response regulator RocA1\trocA1|two-component response regulator RocA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3976\tthiE\t\tGO:0009228\tPMID:8432721\tISS\t\tP\tthiamin-phosphate pyrophosphorylase\tthiC|thiamin-phosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3984\tlnt\t\tGO:0042160\tPMID:8344936\tISS\t\tP\tapolipoprotein N-acyltransferase\tcutE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3984\tlnt\t\tGO:0006878\tPMID:8344936\tISS\t\tP\tapolipoprotein N-acyltransferase\tcutE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3987\tleuS\t\tGO:0004823\tPMID:10024478\tISS\t\tF\tleucyl-tRNA synthetase\tleucine--tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3987\tleuS\t\tGO:0006418\tPMID:10024478\tISS\t\tP\tleucyl-tRNA synthetase\tleucine--tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3989\tholA\t\tGO:0009360\tPMID:8505304\tISS\t\tC\tDNA polymerase III, delta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3999\tdacC\t\tGO:0004180\tPMID:19758330\tISS\t\tF\tD-ala-D-ala-carboxypeptidase\tdacD|D-ala-D-ala endopeptidase|penicillin-binding protein 6 precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3999\tdacC\t\tGO:0009252\tPMID:19758330\tISS\t\tP\tD-ala-D-ala-carboxypeptidase\tdacD|D-ala-D-ala endopeptidase|penicillin-binding protein 6 precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4001\tsltB1\t\tGO:0009252\tPMID:11790124\tISS\t\tP\tsoluble lytic transglycosylase B\tmltB2|membrane-bound lytic transglycosylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4002\trodA\t\tGO:0042546\tPMID:9622350\tISS\t\tP\trod shape-determining protein\tmrdB|RodA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4003\tpbpA\t\tGO:0042546\tPMID:9139922\tISS\t\tP\tpenicillin-binding protein 2\tmrdA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4006\tnadD1\t\tGO:0004515\tPMID:10894752\tISS\t\tF\tnicotinate mononucleotide adenylyltransferase NadD1\tybeN|NAD biosynthetic protein NadD|nadD|nicotinic acid mononucleotide adenylyltransferase|nadD1|nicotinate mononucleotide adenylyltransferase NadD1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4007\tproA\t\tGO:0004350\tPMID:7035170\tISS\t\tF\tgamma-glutamyl phosphate reductase\tproB|Glutamate-semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4007\tproA\t\tGO:0006561\tPMID:7035170\tISS\t\tP\tgamma-glutamyl phosphate reductase\tproB|Glutamate-semialdehyde dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4024\teutB\t\tGO:0008851\tPMID:18444665\tISS\t\tF\tethanolamine ammonia-lyase large subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4031\tppa\t\tGO:0004427\tPMID:7971944\tISS\t\tF\tinorganic pyrophosphatase\tipyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4034\taqpZ\t\tGO:0015250\tPMID:7493926\tISS\t\tF\taquaporin Z\tbniP|bacterial nodulin-like intrinsic protein|water channel protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4034\taqpZ\t\tGO:0016020\tPMID:7493926\tISS\t\tC\taquaporin Z\tbniP|bacterial nodulin-like intrinsic protein|water channel protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4042\txseB\t\tGO:0008855\tPMID:6350262\tISS\t\tF\texodeoxyribonuclease VII small subunit\tExonuclease VII\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4043\tispA\t\tGO:0033850\tPMID:15809342\tISS\t\tF\tgeranyltranstransferase\tFPP synthase|farnesyldiphosphate synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4047\tribA\t\tGO:0009231\tPMID:9574900\tISS\t\tP\tGTP cyclohydrolase II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4050\tpgpA\t\tGO:0008962\tPMID:1309518\tISS\t\tF\tphosphatidylglycerophosphatase A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4051\tthiL\t\tGO:0009030\tPMID:9188462\tISS\t\tF\tthiamine monophosphate kinase\tthiamin-phosphate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4052\tnusB\t\tGO:0031554\tPMID:10383769\tISS\t\tP\tNusB protein\tssyB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4053\tribE\t\tGO:0004746\tPMID:8144477\tISS\t\tF\t6,7-dimethyl-8-ribityllumazine synthase\tribH|lumazine synthase|riboflavin synthase beta chain\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4054\tribB\t\tGO:0004746\tPMID:9515916\tISS\t\tF\tGTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase\tribA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4054\tribB\t\tGO:0033215\tPMID:9515916\tISS\t\tP\tGTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase\tribA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4055\tribC\t\tGO:0004746\tPMID:11024263\tISS\t\tF\triboflavin synthase alpha chain\tribB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4056\tribD\t\tGO:0004746\tPMID:18500821\tISS\t\tF\triboflavin-specific deaminase/reductase\tribG|riboflavin biosynthetic protein RibG|bifunctional pyrimidine deaminase/reductase in pathway of riboflavin biosynthesis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4056\tribD\t\tGO:0019239\tPMID:18500821\tISS\t\tF\triboflavin-specific deaminase/reductase\tribG|riboflavin biosynthetic protein RibG|bifunctional pyrimidine deaminase/reductase in pathway of riboflavin biosynthesis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4056\tribD\t\tGO:0042602\tPMID:18500821\tISS\t\tF\triboflavin-specific deaminase/reductase\tribG|riboflavin biosynthetic protein RibG|bifunctional pyrimidine deaminase/reductase in pathway of riboflavin biosynthesis\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4091\thpaA\t\tGO:1901022\tPMID:8550403\tISS\t\tP\t4-hydroxyphenylacetate 3-monooxygenase large chain\tp-hydroxyphenylacetate 3-hydroxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4091\thpaA\t\tGO:0044248\tPMID:8550403\tISS\t\tP\t4-hydroxyphenylacetate 3-monooxygenase large chain\tp-hydroxyphenylacetate 3-hydroxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4092\thpaC\t\tGO:1901022\tPMID:8550403\tISS\t\tP\t4-hydroxyphenylacetate 3-monooxygenase small chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4092\thpaC\t\tGO:0044248\tPMID:8550403\tISS\t\tP\t4-hydroxyphenylacetate 3-monooxygenase small chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4101\tbfmR\t\tGO:0000156\tPMID:19936057\tISS\t\tF\tBfmR\tbfmR|BfmR|Biofilm maturation Regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4102\tbfmS\t\tGO:0000155\tPMID:19936057\tISS\t\tF\tBfmS\tbfmS|BfmS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4114\tPA4114\t\tGO:0032917\tPMID:10359661\tISS\t\tP\tlysine decarboxylase\tbltD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4123\thpcC\t\tGO:1901022\tPMID:8550403\tISS\t\tP\t5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase\thpaE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4123\thpcC\t\tGO:0044248\tPMID:8550403\tISS\t\tP\t5-carboxy-2-hydroxymuconate semialdehyde dehydrogenase\thpaE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4133\tPA4133\t\tGO:0009399\tPMID:8386371\tISS\t\tP\tcytochrome c oxidase subunit (cbb3-type)\tccoN|fixN|cytN|cytochrome c oxidase polypeptide I homolog  (heme b/copper cytochrome c oxidase subunit)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4153\tPA4153\t\tGO:0000721\tPMID:7813883\tISS\t\tF\t2,3-butanediol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4153\tPA4153\t\tGO:0034078\tPMID:7813883\tISS\t\tP\t2,3-butanediol dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4158\tfepC\t\tGO:0015685\tPMID:1787794\tISS\t\tP\tferric enterobactin transport protein FepC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4159\tfepB\t\tGO:0015685\tPMID:7551033\tISS\t\tP\tferrienterobactin-binding periplasmic protein precursor FepB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4160\tfepD\t\tGO:0015685\tPMID:1787794\tISS\t\tP\tferric enterobactin transport protein FepD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4161\tfepG\t\tGO:0015685\tPMID:1787794\tISS\t\tP\tferric enterobactin transport protein FepG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4196\tbfiR\t\tGO:0000156\tPMID:19936057\tISS\t\tF\tBfiR\tbfiR|BfiR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4197\tbfiS\t\tGO:0000155\tPMID:19936057\tISS\t\tF\tBfiS\tbfiS|BfiS|Biofilm initiation Sensor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4201\tddlA\t\tGO:0009252\tPMID:1554356\tISS\t\tP\tD-alanine-D-alanine ligase A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4201\tddlA\t\tGO:0008716\tPMID:1554356\tISS\t\tF\tD-alanine-D-alanine ligase A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4235\tftnA\t\tGO:0008199\tPMID:21574546\tISS\t\tF\tbacterial ferritin\tbacterial ferritin|ftnA|FtnA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4237\trplQ\t\tGO:0006412\tPMID:3309351\tISS\t\tP\t50S ribosomal protein L17\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4238\trpoA\t\tGO:0006351\tPMID:1629175\tISS\t\tP\tDNA-directed RNA polymerase alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4239\trpsD\t\tGO:0006412\tPMID:6379605\tISS\t\tP\t30S ribosomal protein S4\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4240\trpsK\t\tGO:0006412\tPMID:7007074\tISS\t\tP\t30S ribosomal protein S11\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4241\trpsM\t\tGO:0006412\tPMID:2989779\tISS\t\tP\t30S ribosomal protein S13\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4242\trpmJ\t\tGO:0006412\tPMID:3298224\tISS\t\tP\t50S ribosomal protein L36\tribosomal protein B\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4243\tsecY\t\tGO:0015031\tPMID:17077865\tISS\t\tP\tsecretion protein SecY\tprlA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4244\trplO\t\tGO:0006412\tPMID:340263\tISS\t\tP\t50S ribosomal protein L15\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4245\trpmD\t\tGO:0006412\tPMID:776670\tISS\t\tP\t50S ribosomal protein L30\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4246\trpsE\t\tGO:0006412\tPMID:2989779\tISS\t\tP\t30S ribosomal protein S5\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4247\trplR\t\tGO:0006412\tPMID:1098937\tISS\t\tP\t50S ribosomal protein L18\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4248\trplF\t\tGO:0006412\tPMID:324885\tISS\t\tP\t50S ribosomal protein L6\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4249\trpsH\t\tGO:0006412\tPMID:1735715\tISS\t\tP\t30S ribosomal protein S8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4250\trpsN\t\tGO:0006412\tPMID:6222285\tISS\t\tP\t30S ribosomal protein S14\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4251\trplE\t\tGO:0006412\tPMID:6222285\tISS\t\tP\t50S ribosomal protein L5\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4252\trplX\t\tGO:0006412\tPMID:6222285\tISS\t\tP\t50S ribosomal protein L24\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4253\trplN\t\tGO:0006412\tPMID:6222285\tISS\t\tP\t50S ribosomal protein L14\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4254\trpsQ\t\tGO:0006412\tPMID:108517\tISS\t\tP\t30S ribosomal protein S17\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4255\trpmC\t\tGO:0006412\tPMID:1092361\tISS\t\tP\t50S ribosomal protein L29\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4256\trplP\t\tGO:0006412\tPMID:3297687\tISS\t\tP\t50S ribosomal protein L16\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4257\trpsC\t\tGO:0006412\tPMID:387449\tISS\t\tP\t30S ribosomal protein S3\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4258\trplV\t\tGO:0006412\tPMID:7007072\tISS\t\tP\t50S ribosomal protein L22\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4259\trpsS\t\tGO:0006412\tPMID:348496\tISS\t\tP\t30S ribosomal protein S19\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4260\trplB\t\tGO:0006412\tPMID:9531480\tISS\t\tP\t50S ribosomal protein L2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4261\trplW\t\tGO:0006412\tPMID:391594\tISS\t\tP\t50S ribosomal protein L23\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4262\trplD\t\tGO:0006412\tPMID:3892488\tISS\t\tP\t50S ribosomal protein L4\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4263\trplC\t\tGO:0006412\tPMID:3892488\tISS\t\tP\t50S ribosomal protein L3\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4264\trpsJ\t\tGO:0006412\tPMID:3892488\tISS\t\tP\t30S ribosomal protein S10\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4265\ttufA\t\tGO:0006412\tPMID:6796560\tISS\t\tP\telongation factor Tu\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4266\tfusA1\t\tGO:0006412\tPMID:6796560\tISS\t\tP\telongation factor G\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4267\trpsG\t\tGO:0006412\tPMID:7507167\tISS\t\tP\t30S ribosomal protein S7\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4268\trpsL\t\tGO:0006412\tPMID:10209746\tISS\t\tP\t30S ribosomal protein S12\tstr\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4269\trpoC\t\tGO:0006351\tPMID:6287430\tISS\t\tP\tDNA-directed RNA polymerase beta* chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4270\trpoB\t\tGO:0006351\tPMID:6266829\tISS\t\tP\tDNA-directed RNA polymerase beta chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4271\trplL\t\tGO:0006412\tPMID:2751714\tISS\t\tP\t50S ribosomal protein L7 / L12\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4272\trplJ\t\tGO:0006412\tPMID:782920\tISS\t\tP\t50S ribosomal protein L10\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4273\trplA\t\tGO:0006412\tPMID:365581\tISS\t\tP\t50S ribosomal protein L1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4274\trplK\t\tGO:0006412\tPMID:2483975\tISS\t\tP\t50S ribosomal protein L11\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4276\tsecE\t\tGO:0015031\tPMID:2673920\tISS\t\tP\tsecretion protein SecE\tprlG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4277\ttufB\t\tGO:0006412\tPMID:7011904\tISS\t\tP\telongation factor Tu\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0008854\tPMID:1618858\tISS\t\tF\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0009338\tPMID:1618858\tISS\t\tC\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0004386\tPMID:9092551\tISS\t\tF\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0043142\tPMID:9092551\tISS\t\tF\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0004519\tPMID:1618858\tISS\t\tF\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0005524\tPMID:3298248\tISS\t\tF\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4284\trecB\t\tGO:0008854\tPMID:1618858\tISS\t\tF\texodeoxyribonuclease V beta chain\trorA|exonuclease V 135 kD polypeptide\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4284\trecB\t\tGO:0009338\tPMID:1618858\tISS\t\tC\texodeoxyribonuclease V beta chain\trorA|exonuclease V 135 kD polypeptide\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4285\trecC\t\tGO:0008854\tPMID:1618858\tISS\t\tF\texodeoxyribonuclease V gamma chain\texonuclease V|125 kD polypeptide\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4285\trecC\t\tGO:0009338\tPMID:1618858\tISS\t\tC\texodeoxyribonuclease V gamma chain\texonuclease V|125 kD polypeptide\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0004743\tPMID:7559366\tISS\t\tF\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4329\tpykA\t\tGO:0042866\tPMID:7559366\tISS\t\tP\tpyruvate kinase II\tpyk-II|Phosphoenolpyruvate kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4350\tolsB\t\tGO:0046467\tPMID:15341653\tISS\t\tP\tOlsB\tOlsB|olsB|olsB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4374\tmexV\t\tGO:0006811\tPMID:12951344\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexV\tprobable RND efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexV|mexV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4375\tmexW\t\tGO:0006811\tPMID:12951344\tISS\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexW\tprobable RND efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexW|mexW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4376\tpncB2\t\tGO:0004516\tPMID:2211655\tISS\t\tF\tnicotinate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4397\tpanE\t\tGO:0008677\tPMID:9721324\tISS\t\tF\tketopantoate reductase\tabpA|alternative pyrimidine biosynthesis protein|thiamin biosynthesis protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4403\tsecA\t\tGO:0015031\tPMID:2841285\tISS\t\tP\tsecretion protein SecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4407\tftsZ\t\tGO:0005525\tPMID:1528267\tISS\t\tF\tcell division protein FtsZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4407\tftsZ\t\tGO:0003924\tPMID:8412693\tISS\t\tF\tcell division protein FtsZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4410\tddlB\t\tGO:0008716\tPMID:1993184\tISS\t\tF\tD-alanine--D-alanine ligase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4412\tmurG\t\tGO:0050511\tPMID:10338150\tISS\t\tF\tUDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4412\tmurG\t\tGO:0009252\tPMID:1649817\tISS\t\tP\tUDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4428\tsspA\t\tGO:0034198\tPMID:8022275\tISS\t\tP\tstringent starvation protein A\tpog|ssp\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4432\trpsI\t\tGO:0006412\tPMID:3884974\tISS\t\tP\t30S ribosomal protein S9\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4433\trplM\t\tGO:0006412\tPMID:3884974\tISS\t\tP\t50S ribosomal protein L13\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4444\tmltB1\t\tGO:0009252\tPMID:11790124\tISS\t\tP\tsoluble and membrane-bound lytic transglycosylases\tmembrane-bound lytic transglycosylase, sMltB, soluble lytic transglycosylases B (SltB)|murein hydrolase B\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4447\thisC1\t\tGO:0004400\tPMID:11518529\tISS\t\tF\thistidinol-phosphate aminotransferase\this8|imidazole acetol-phosphate transaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4447\thisC1\t\tGO:0000105\tPMID:11518529\tISS\t\tP\thistidinol-phosphate aminotransferase\this8|imidazole acetol-phosphate transaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4448\thisD\t\tGO:0004399\tPMID:3018428\tISS\t\tF\thistidinol dehydrogenase\thisX\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4450\tmurA\t\tGO:0009252\tPMID:7608103\tISS\t\tP\tUDP-N-acetylglucosamine 1-carboxyvinyltransferase\tenoylpyruvate transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4450\tmurA\t\tGO:0008760\tPMID:7608103\tISS\t\tF\tUDP-N-acetylglucosamine 1-carboxyvinyltransferase\tenoylpyruvate transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4464\tptsN\t\tGO:0009401\tPMID:17416664\tISS\t\tP\tnitrogen regulatory IIA protein\tcomponent A|probable phosphotransferase enzyme II\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4472\tpmbA\t\tGO:0030651\tPMID:2082149\tISS\t\tP\tPmbA protein\ttldE|TldE protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4479\tmreD\t\tGO:0008360\tPMID:2687239\tISS\t\tP\trod shape-determining protein MreD\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4482\tgatC\t\tGO:0050567\tPMID:9342321\tISS\t\tF\tGlu-tRNA(Gln) amidotransferase subunit C\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4482\tgatC\t\tGO:0030956\tPMID:9342321\tISS\t\tC\tGlu-tRNA(Gln) amidotransferase subunit C\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4483\tgatA\t\tGO:0050567\tPMID:9342321\tISS\t\tF\tGlu-tRNA(Gln) amidotransferase subunit A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4483\tgatA\t\tGO:0030956\tPMID:9342321\tISS\t\tC\tGlu-tRNA(Gln) amidotransferase subunit A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4484\tgatB\t\tGO:0050567\tPMID:9342321\tISS\t\tF\tGlu-tRNA(Gln) amidotransferase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4484\tgatB\t\tGO:0030956\tPMID:9342321\tISS\t\tC\tGlu-tRNA(Gln) amidotransferase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4493\troxR\t\tGO:0000156\tPMID:12139621\tISS\t\tF\tRoxR\troxR|RoxR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4494\troxS\t\tGO:0000155\tPMID:12139621\tISS\t\tF\tRoxS\troxS|RoxS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4512\tlpxO1\t\tGO:0009245\tPMID:21764941\tISS\t\tP\tlipopolysaccharide biosynthetic protein LpxO1\tlpxO1|lipopolysaccharide biosynthetic protein LpxO1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4512\tlpxO1\t\tGO:0051213\tPMID:18254598\tISS\t\tF\tlipopolysaccharide biosynthetic protein LpxO1\tlpxO1|lipopolysaccharide biosynthetic protein LpxO1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4524\tnadC\t\tGO:0004514\tPMID:8419294\tISS\t\tF\tnicotinate-nucleotide pyrophosphorylase\tquinolinate phosphoribosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4529\tcoaE\t\tGO:0015937\tPMID:11292795\tISS\t\tP\tdephosphocoenzyme A kinase\tCoaE protein|coaE|dephosphocoenzyme A kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4529\tcoaE\t\tGO:0004140\tPMID:11292795\tISS\t\tF\tdephosphocoenzyme A kinase\tCoaE protein|coaE|dephosphocoenzyme A kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4542\tclpB\t\tGO:0034605\tPMID:2066329\tISS\t\tP\tClpB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4542\tclpB\t\tGO:0005524\tPMID:9677327\tISS\t\tF\tClpB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4542\tclpB\t\tGO:0016887\tPMID:9677327\tISS\t\tF\tClpB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4546\tpilS\t\tGO:0000155\tPMID:8097014\tISS\t\tF\ttwo-component sensor PilS\tprotein kinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4547\tpilR\t\tGO:0000156\tPMID:8097014\tISS\t\tF\ttwo-component response regulator PilR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4557\tlytB\t\tGO:0051483\tPMID:11418107\tISS\t\tP\tLytB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4557\tlytB\t\tGO:0051745\tPMID:12706830\tISS\t\tF\tLytB protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4561\tribF\t\tGO:0003919\tPMID:9473052\tISS\t\tF\triboflavin kinase/FAD synthase\tflavokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4561\tribF\t\tGO:0008531\tPMID:9473052\tISS\t\tF\triboflavin kinase/FAD synthase\tflavokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4563\trpsT\t\tGO:0006412\tPMID:7683367\tISS\t\tP\t30S ribosomal protein S20\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4565\tproB\t\tGO:0006561\tPMID:15502337\tISS\t\tP\tglutamate 5-kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4565\tproB\t\tGO:0004349\tPMID:15502337\tISS\t\tF\tglutamate 5-kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4567\trpmA\t\tGO:0006412\tPMID:9677420\tISS\t\tP\t50S ribosomal protein L27\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4568\trplU\t\tGO:0006412\tPMID:9693099\tISS\t\tP\t50S ribosomal protein L21\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4585\trtcA\t\tGO:0003963\tPMID:9738023\tISS\t\tF\tRNA 3'-terminal phosphate cyclase\tyhgK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4585\trtcA\t\tGO:0005524\tPMID:22167800\tISS\t\tF\tRNA 3'-terminal phosphate cyclase\tyhgK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4585\trtcA\t\tGO:0070566\tPMID:21098490\tISS\t\tF\tRNA 3'-terminal phosphate cyclase\tyhgK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4588\tgdhA\t\tGO:0004354\tPMID:8355660\tISS\t\tF\tglutamate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4626\thprA\t\tGO:0016618\tPMID:1729225\tISS\t\tF\tglycerate dehydrogenase\thydroxypyruvate reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4628\tlysP\t\tGO:0015171\tPMID:1315732\tISS\t\tF\tlysine-specific permease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4628\tlysP\t\tGO:1902022\tPMID:1315732\tISS\t\tP\tlysine-specific permease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4647\turaA\t\tGO:0015210\tPMID:7721693\tISS\t\tF\turacil permease\tpyrP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4647\turaA\t\tGO:0015857\tPMID:7721693\tISS\t\tP\turacil permease\tpyrP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4655\themH\t\tGO:0004325\tPMID:8056770\tISS\t\tF\tferrochelatase\tvisA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4655\themH\t\tGO:0006783\tPMID:8056770\tISS\t\tP\tferrochelatase\tvisA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4655\themH\t\tGO:0044550\tPMID:11728716\tISS\t\tP\tferrochelatase\tvisA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4660\tphr\t\tGO:0003904\tPMID:6325460\tISS\t\tF\tdeoxyribodipyrimidine photolyase\tDNA photolyase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4662\tmurI\t\tGO:0009252\tPMID:1355768\tISS\t\tP\tglutamate racemase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4662\tmurI\t\tGO:0008881\tPMID:8098327\tISS\t\tF\tglutamate racemase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4663\tmoeB\t\tGO:0006777\tPMID:11463785\tISS\t\tP\tmolybdopterin biosynthesis MoeB protein\tchlN\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4665\tprfA\t\tGO:0003747\tPMID:15312775\tISS\t\tF\tpeptide chain release factor 1\trf1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4665\tprfA\t\tGO:0006415\tPMID:15312775\tISS\t\tP\tpeptide chain release factor 1\trf1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4666\themA\t\tGO:0008883\tPMID:8831980\tISS\t\tF\tglutamyl-tRNA reductase\tglutR|hem1|hemA|delta-aminolevulinic synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4666\themA\t\tGO:0033014\tPMID:2548996\tISS\t\tP\tglutamyl-tRNA reductase\tglutR|hem1|hemA|delta-aminolevulinic synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4669\tipk\t\tGO:0050515\tPMID:21282208\tISS\t\tF\tisopentenyl monophosphate kinase\tychB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4669\tipk\t\tGO:0008299\tPMID:21282208\tISS\t\tP\tisopentenyl monophosphate kinase\tychB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4672\tPA4672\t\tGO:0004045\tPMID:9303320\tISS\t\tF\tpeptidyl-tRNA hydrolase\tpth\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4678\trimI\t\tGO:0034212\tPMID:6991870\tISS\t\tF\tpeptide n-acetyltransferase RimI\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4687\thitA\t\tGO:0015682\tPMID:9360608\tISS\t\tP\tferric iron-binding periplasmic protein HitA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4693\tpssA\t\tGO:0003882\tPMID:9260935\tISS\t\tF\tphosphatidylserine synthase\tCDP-diacylglycerol--serine O-phosphatidyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4693\tpssA\t\tGO:0006646\tPMID:9260935\tISS\t\tP\tphosphatidylserine synthase\tCDP-diacylglycerol--serine O-phosphatidyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4694\tilvC\t\tGO:0004455\tPMID:16322583\tISS\t\tF\tketol-acid reductoisomerase\tacetohydroxy-acid isomeroreductase|alpha-keto-beta-hydroxylacil reductoisomerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4694\tilvC\t\tGO:0009082\tPMID:16322583\tISS\t\tP\tketol-acid reductoisomerase\tacetohydroxy-acid isomeroreductase|alpha-keto-beta-hydroxylacil reductoisomerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4695\tilvH\t\tGO:0003984\tPMID:9581571\tISS\t\tF\tacetolactate synthase isozyme III small subunit\tAHAS-III, ALS-III|acetohydroxy-acid synthase III small subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4695\tilvH\t\tGO:0009082\tPMID:9581571\tISS\t\tP\tacetolactate synthase isozyme III small subunit\tAHAS-III, ALS-III|acetohydroxy-acid synthase III small subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4695\tilvH\t\tGO:0005948\tPMID:9581571\tISS\t\tC\tacetolactate synthase isozyme III small subunit\tAHAS-III, ALS-III|acetohydroxy-acid synthase III small subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4696\tilvI\t\tGO:0003984\tPMID:9581571\tISS\t\tF\tacetolactate synthase large subunit\tacetohydroxy-acid synthase III large subunit|AHAS-III, ALS-III\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4696\tilvI\t\tGO:0009082\tPMID:9581571\tISS\t\tP\tacetolactate synthase large subunit\tacetohydroxy-acid synthase III large subunit|AHAS-III, ALS-III\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4696\tilvI\t\tGO:0005948\tPMID:9581571\tISS\t\tC\tacetolactate synthase large subunit\tacetohydroxy-acid synthase III large subunit|AHAS-III, ALS-III\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4700\tmrcB\t\tGO:0009252\tPMID:6389538\tISS\t\tP\tpenicillin-binding protein 1B\tpbpF|ponB|peptidoglycan synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4700\tmrcB\t\tGO:0008955\tPMID:6389538\tISS\t\tF\tpenicillin-binding protein 1B\tpbpF|ponB|peptidoglycan synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4700\tmrcB\t\tGO:0009002\tPMID:6389538\tISS\t\tF\tpenicillin-binding protein 1B\tpbpF|ponB|peptidoglycan synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4720\ttrmA\t\tGO:0030697\tPMID:1373891\tISS\t\tF\ttRNA (uracil-5-)-methyltransferase\tRUMT|trna(m-5U54)-methyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4725\tcbrA\t\tGO:0000155\tPMID:11401699\tISS\t\tF\ttwo-component sensor CbrA\tcbrA|two-component sensor CbrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4726\tcbrB\t\tGO:0000156\tPMID:11401699\tISS\t\tF\ttwo-component response regulator CbrB\tcbrB|two-component response regulator CbrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4727\tpcnB\t\tGO:0004652\tPMID:20482591\tISS\t\tF\tpoly(A) polymerase\tplasmid copy number protein|polynucleotide adenylyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4728\tfolK\t\tGO:0003848\tPMID:1325970\tISS\t\tF\t2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase\t7,8-dihydro-6-hydroxymethylpterin pyrophosphokinase|6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4731\tpanD\t\tGO:0016540\tPMID:9169598\tISS\t\tP\taspartate 1-decarboxylase precursor\taspartate alpha-decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4732\tpgi\t\tGO:0004347\tPMID:7004378\tISS\t\tF\tglucose-6-phosphate isomerase\tphosphohexomutase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4732\tpgi\t\tGO:0006096\tPMID:5337843\tISS\t\tP\tglucose-6-phosphate isomerase\tphosphohexomutase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4732\tpgi\t\tGO:0034599\tPMID:18368388\tISS\t\tP\tglucose-6-phosphate isomerase\tphosphohexomutase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4740\tpnp\t\tGO:0004654\tPMID:13438894\tISS\t\tF\tpolyribonucleotide nucleotidyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4741\trpsO\t\tGO:0006412\tPMID:7685101\tISS\t\tP\t30S ribosomal protein S15\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4741\trpsO\t\tGO:0003723\tPMID:7685101\tISS\t\tF\t30S ribosomal protein S15\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4743\trbfA\t\tGO:0043024\tPMID:7535280\tISS\t\tF\tribosome-binding factor A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4743\trbfA\t\tGO:0009409\tPMID:8898389\tISS\t\tP\tribosome-binding factor A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4743\trbfA\t\tGO:0030490\tPMID:9422595\tISS\t\tP\tribosome-binding factor A\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4747\tsecG\t\tGO:0043952\tPMID:7650029\tISS\t\tP\tsecretion protein SecG\tpreprotein translocase band 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4747\tsecG\t\tGO:0065002\tPMID:7650029\tISS\t\tP\tsecretion protein SecG\tpreprotein translocase band 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4747\tsecG\t\tGO:0006886\tPMID:7650029\tISS\t\tP\tsecretion protein SecG\tpreprotein translocase band 1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4748\ttpiA\t\tGO:0004807\tPMID:6214548\tISS\t\tF\ttriosephosphate isomerase\ttpi|TIM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4748\ttpiA\t\tGO:0006094\tPMID:11947134\tISS\t\tP\ttriosephosphate isomerase\ttpi|TIM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4750\tfolP\t\tGO:0004156\tPMID:1657875\tISS\t\tF\tdihydropteroate synthase\tdhpS|DHPS|dihydropteroate pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4750\tfolP\t\tGO:0003848\tPMID:1657875\tISS\t\tF\tdihydropteroate synthase\tdhpS|DHPS|dihydropteroate pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4750\tfolP\t\tGO:0005737\tPMID:1657875\tISS\t\tC\tdihydropteroate synthase\tdhpS|DHPS|dihydropteroate pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4750\tfolP\t\tGO:0046656\tPMID:1522070\tISS\t\tP\tdihydropteroate synthase\tdhpS|DHPS|dihydropteroate pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4751\tftsH\t\tGO:0016887\tPMID:7781608\tISS\t\tF\tcell division protein FtsH\ttolZ|mrsC|hflB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4751\tftsH\t\tGO:0006508\tPMID:7781608\tISS\t\tP\tcell division protein FtsH\ttolZ|mrsC|hflB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4752\tftsJ\t\tGO:0008649\tPMID:10748051\tISS\t\tF\tcell division protein FtsJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4752\tftsJ\t\tGO:0001510\tPMID:10748051\tISS\t\tP\tcell division protein FtsJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4752\tftsJ\t\tGO:0006412\tPMID:10814528\tISS\t\tP\tcell division protein FtsJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4755\tgreA\t\tGO:0006354\tPMID:1384037\tISS\t\tP\ttranscription elongation factor GreA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4755\tgreA\t\tGO:0001108\tPMID:10625443\tISS\t\tF\ttranscription elongation factor GreA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4760\tdnaJ\t\tGO:0034605\tPMID:3003085\tISS\t\tP\tDnaJ protein\theat shock protein DnaJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4760\tdnaJ\t\tGO:0042158\tPMID:16109938\tISS\t\tP\tDnaJ protein\theat shock protein DnaJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4760\tdnaJ\t\tGO:0006260\tPMID:360036\tISS\t\tP\tDnaJ protein\theat shock protein DnaJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4760\tdnaJ\t\tGO:0006508\tPMID:3149251\tISS\t\tP\tDnaJ protein\theat shock protein DnaJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4760\tdnaJ\t\tGO:0006457\tPMID:8898387\tISS\t\tP\tDnaJ protein\theat shock protein DnaJ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0042158\tPMID:16109938\tISS\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0006260\tPMID:6086613\tISS\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0016887\tPMID:6314326\tISS\t\tF\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0046777\tPMID:1835085\tISS\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0006508\tPMID:3149251\tISS\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4761\tdnaK\t\tGO:0006457\tPMID:8898387\tISS\t\tP\tDnaK protein\theat shock protein 70, HSP70|heat shock protein DnaK\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4762\tgrpE\t\tGO:0034605\tPMID:2424889\tISS\t\tP\theat shock protein GrpE\tHsp24|heat shock protein B25.3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4762\tgrpE\t\tGO:0006508\tPMID:3149251\tISS\t\tP\theat shock protein GrpE\tHsp24|heat shock protein B25.3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4762\tgrpE\t\tGO:0006457\tPMID:8898387\tISS\t\tP\theat shock protein GrpE\tHsp24|heat shock protein B25.3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4763\trecN\t\tGO:0006302\tPMID:6092851\tISS\t\tP\tDNA repair protein RecN\trecombination protein N\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4763\trecN\t\tGO:0071479\tPMID:6092851\tISS\t\tP\tDNA repair protein RecN\trecombination protein N\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4763\trecN\t\tGO:0000724\tPMID:2993876\tISS\t\tP\tDNA repair protein RecN\trecombination protein N\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4763\trecN\t\tGO:0009432\tPMID:2997124\tISS\t\tP\tDNA repair protein RecN\trecombination protein N\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4771\tlldD\t\tGO:0004459\tPMID:18473\tISS\t\tF\tL-lactate dehydrogenase\tlctD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4771\tlldD\t\tGO:0019516\tPMID:8407843\tISS\t\tP\tL-lactate dehydrogenase\tlctD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4776\tpmrA\t\tGO:0000156\tPMID:14507375\tISS\t\tF\tPmrA: two-component regulator system response regulator PmrA\tpmrA|PmrA: two-component regulator system response regulator PmrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4777\tpmrB\t\tGO:0000155\tPMID:14507375\tISS\t\tF\tPmrB: two-component regulator system signal sensor kinase PmrB\tpmrB|PmrB: two-component regulator system signal sensor kinase PmrB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4807\tselB\t\tGO:0001514\tPMID:2531290\tISS\t\tP\tselenocysteine-specific elongation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4807\tselB\t\tGO:0000049\tPMID:1939093\tISS\t\tF\tselenocysteine-specific elongation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4807\tselB\t\tGO:0035368\tPMID:8483932\tISS\t\tF\tselenocysteine-specific elongation factor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4808\tselA\t\tGO:0016260\tPMID:2962989\tISS\t\tP\tL-seryl-tRNA(ser) selenium transferase\tfdhA|selenocysteine synthase, selenocysteinyl-trna(sec) synthase|cysteinyl-tRNA(ser) selenium transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4808\tselA\t\tGO:0097056\tPMID:2007584\tISS\t\tP\tL-seryl-tRNA(ser) selenium transferase\tfdhA|selenocysteine synthase, selenocysteinyl-trna(sec) synthase|cysteinyl-tRNA(ser) selenium transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4808\tselA\t\tGO:0004125\tPMID:2007584\tISS\t\tF\tL-seryl-tRNA(ser) selenium transferase\tfdhA|selenocysteine synthase, selenocysteinyl-trna(sec) synthase|cysteinyl-tRNA(ser) selenium transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4808\tselA\t\tGO:0030170\tPMID:2007584\tISS\t\tF\tL-seryl-tRNA(ser) selenium transferase\tfdhA|selenocysteine synthase, selenocysteinyl-trna(sec) synthase|cysteinyl-tRNA(ser) selenium transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4809\tfdhE\t\tGO:0008863\tPMID:3077634\tISS\t\tF\tFdhE protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4809\tfdhE\t\tGO:0009061\tPMID:3077634\tISS\t\tP\tFdhE protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4809\tfdhE\t\tGO:0008199\tPMID:18716757\tISS\t\tF\tFdhE protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4810\tfdnI\t\tGO:0009061\tPMID:1099093\tISS\t\tP\tnitrate-inducible formate dehydrogenase, gamma subunit\tfdhI|formate dehydrogenase cytochrome b556 subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4810\tfdnI\t\tGO:0017004\tPMID:1099093\tISS\t\tP\tnitrate-inducible formate dehydrogenase, gamma subunit\tfdhI|formate dehydrogenase cytochrome b556 subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4811\tfdnH\t\tGO:0009061\tPMID:1099093\tISS\t\tP\tnitrate-inducible formate dehydrogenase, beta subunit\tfdhH|iron-sulfur subunit|nitrate-inducible formate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4812\tfdnG\t\tGO:0009061\tPMID:1099093\tISS\t\tP\tformate dehydrogenase-O, major subunit\tfdhG|nitrate-inducible formate dehydrogenase major subunit\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4814\tfadH2\t\tGO:0008670\tPMID:2506179\tISS\t\tF\t2,4-dienoyl-CoA reductase FadH2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4829\tlpd3\t\tGO:0004148\tPMID:1722146\tISS\t\tF\tdihydrolipoamide dehydrogenase 3\tLPD-3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4846\taroQ1\t\tGO:0003855\tPMID:2950851\tISS\t\tF\t3-dehydroquinate dehydratase\taroD1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4846\taroQ1\t\tGO:0019632\tPMID:2950851\tISS\t\tP\t3-dehydroquinate dehydratase\taroD1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4846\taroQ1\t\tGO:0009073\tPMID:2950851\tISS\t\tP\t3-dehydroquinate dehydratase\taroD1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4850\tprmA\t\tGO:0008276\tPMID:8226664\tISS\t\tF\tribosomal protein L11 methyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4865\tureA\t\tGO:0009039\tPMID:7559354\tISS\t\tF\turease gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4865\tureA\t\tGO:0035550\tPMID:7559354\tISS\t\tC\turease gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4865\tureA\t\tGO:0043419\tPMID:7559354\tISS\t\tP\turease gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4865\tureA\t\tGO:0016151\tPMID:7559354\tISS\t\tF\turease gamma subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4866\tPA4866\t\tGO:0009039\tPMID:7559354\tISS\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4866\tPA4866\t\tGO:0035550\tPMID:7559354\tISS\t\tC\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4866\tPA4866\t\tGO:0016151\tPMID:7559354\tISS\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4866\tPA4866\t\tGO:0043419\tPMID:7559354\tISS\t\tP\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4868\tureC\t\tGO:0009039\tPMID:7559354\tISS\t\tF\turease alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4868\tureC\t\tGO:0035550\tPMID:7559354\tISS\t\tC\turease alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4868\tureC\t\tGO:0043419\tPMID:7559354\tISS\t\tP\turease alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4868\tureC\t\tGO:0016151\tPMID:7559354\tISS\t\tF\turease alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4891\tureE\t\tGO:0051604\tPMID:24115911\tISS\t\tP\turease accessory protein UreE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4891\tureE\t\tGO:0008270\tPMID:22010876\tISS\t\tF\turease accessory protein UreE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4892\tureF\t\tGO:0051604\tPMID:24115911\tISS\t\tP\turease accessory protein UreF\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4893\tureG\t\tGO:0051604\tPMID:24115911\tISS\t\tP\turease accessory protein UreG\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4897\tPA4897\t\tGO:0038023\tPMID:18086184\tISS\t\tF\tTonB-dependent receptor\toptI|TonB-dependent receptor|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4897\tPA4897\t\tGO:0007166\tPMID:18086184\tISS\t\tP\tTonB-dependent receptor\toptI|TonB-dependent receptor|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4919\tpncB1\t\tGO:0004516\tPMID:18490451\tISS\t\tF\tnicotinate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4919\tpncB1\t\tGO:0009435\tPMID:18490451\tISS\t\tP\tnicotinate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4919\tpncB1\t\tGO:0034355\tPMID:18490451\tISS\t\tP\tnicotinate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0006260\tPMID:3007474\tISS\t\tP\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0032508\tPMID:3007474\tISS\t\tP\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0006270\tPMID:345277\tISS\t\tP\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0016887\tPMID:11061975\tISS\t\tF\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0003678\tPMID:3007474\tISS\t\tF\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0005524\tPMID:11061975\tISS\t\tF\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4931\tdnaB\t\tGO:0006270\tPMID:345277\tISS\t\tP\treplicative DNA helicase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4932\trplI\t\tGO:0006412\tPMID:8780779\tISS\t\tP\t50S ribosomal protein L9\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4932\trplI\t\tGO:0003723\tPMID:8780779\tISS\t\tF\t50S ribosomal protein L9\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4934\trpsR\t\tGO:0006412\tPMID:2459389\tISS\t\tP\t30S ribosomal protein S18\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4934\trpsR\t\tGO:0003723\tPMID:2459389\tISS\t\tF\t30S ribosomal protein S18\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4935\trpsF\t\tGO:0006412\tPMID:2459389\tISS\t\tP\t30S ribosomal protein S6\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4935\trpsF\t\tGO:0003723\tPMID:2459389\tISS\t\tF\t30S ribosomal protein S6\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4937\trnr\t\tGO:0000175\tPMID:11948193\tISS\t\tF\texoribonuclease RNase R\tvacB|virulence protein VacB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4937\trnr\t\tGO:0008997\tPMID:11948193\tISS\t\tF\texoribonuclease RNase R\tvacB|virulence protein VacB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4937\trnr\t\tGO:0006402\tPMID:15664199\tISS\t\tP\texoribonuclease RNase R\tvacB|virulence protein VacB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4937\trnr\t\tGO:0034458\tPMID:20023028\tISS\t\tF\texoribonuclease RNase R\tvacB|virulence protein VacB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4941\thflC\t\tGO:0045861\tPMID:8947034\tISS\t\tP\tprotease subunit HflC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4942\thflK\t\tGO:0045861\tPMID:8947034\tISS\t\tP\tprotease subunit HflK\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4945\tmiaA\t\tGO:0052381\tPMID:4341485\tISS\t\tF\tdelta 2-isopentenylpyrophosphate transferase\ttRNA:isopentenyladenine transferase|tRNA prenyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4945\tmiaA\t\tGO:0006400\tPMID:4341485\tISS\t\tP\tdelta 2-isopentenylpyrophosphate transferase\ttRNA:isopentenyladenine transferase|tRNA prenyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4946\tmutL\t\tGO:0006298\tPMID:2665076\tISS\t\tP\tDNA mismatch repair protein MutL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4946\tmutL\t\tGO:0003677\tPMID:12606120\tISS\t\tF\tDNA mismatch repair protein MutL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4946\tmutL\t\tGO:0000018\tPMID:2555716\tISS\t\tP\tDNA mismatch repair protein MutL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4973\tthiC\t\tGO:0009228\tPMID:9139923\tISS\t\tP\tthiamin biosynthesis protein ThiC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5003\tPA5003\t\tGO:1901652\tPMID:21700666\tISS\t\tP\tMig-14-like protein\tMig-14-like protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5008\twapP\t\tGO:0016301\tPMID:10692150\tISS\t\tF\tWapP\twaaX|wapP|waaP|WaaP|hypothetical protein|WapP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5010\twaaG\t\tGO:0009245\tPMID:21042030\tISS\t\tP\tUDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG\trfaG|LPS core biosynthetic gene WaaG|Glucosyltransferase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5010\twaaG\t\tGO:0046527\tPMID:21042030\tISS\t\tF\tUDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG\trfaG|LPS core biosynthetic gene WaaG|Glucosyltransferase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5013\tilvE\t\tGO:0004084\tPMID:378964\tISS\t\tF\tbranched-chain amino acid transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5013\tilvE\t\tGO:0009081\tPMID:378964\tISS\t\tP\tbranched-chain amino acid transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5014\tglnE\t\tGO:0018117\tPMID:18469098\tISS\t\tP\tglutamate-ammonia-ligase adenylyltransferase\tGlutamine-synthetase adenylyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5018\tmsrA\t\tGO:0008113\tPMID:23687271\tISS\t\tF\tpeptide methionine sulfoxide reductase\tpmsR|peptide met(o) reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5035\tgltD\t\tGO:0004355\tPMID:4565085\tISS\t\tF\tglutamate synthase small chain\taspB|NADPH-GOGAT gltS beta chain\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5035\tgltD\t\tGO:0006537\tPMID:4565085\tISS\t\tP\tglutamate synthase small chain\taspB|NADPH-GOGAT gltS beta chain\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5036\tgltB\t\tGO:0004355\tPMID:4565085\tISS\t\tF\tglutamate synthase large chain precursor\taspB|GltS alpha chain|NADPH-GOGAT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5036\tgltB\t\tGO:0006537\tPMID:4565085\tISS\t\tP\tglutamate synthase large chain precursor\taspB|GltS alpha chain|NADPH-GOGAT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5039\taroK\t\tGO:0004765\tPMID:11483005\tISS\t\tF\tshikimate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5039\taroK\t\tGO:0019632\tPMID:15583379\tISS\t\tP\tshikimate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5039\taroK\t\tGO:0009073\tPMID:11483005\tISS\t\tP\tshikimate kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5045\tponA\t\tGO:0009273\tPMID:2211517\tISS\t\tP\tpenicillin-binding protein 1A\tmrcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5049\trpmE\t\tGO:0008097\tPMID:7015289\tISS\t\tF\t50S ribosomal protein L31\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0006302\tPMID:8631700\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0006310\tPMID:8631700\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0010332\tPMID:8631700\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0046677\tPMID:8631700\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0006270\tPMID:7525276\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5050\tpriA\t\tGO:0006260\tPMID:11929519\tISS\t\tP\tprimosomal protein N'\treplication factor Y\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5051\targS\t\tGO:0006420\tPMID:37899\tISS\t\tP\targinyl-tRNA synthetase\targinine--tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5051\targS\t\tGO:0005524\tPMID:2183195\tISS\t\tF\targinyl-tRNA synthetase\targinine--tRNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5063\tubiE\t\tGO:0006744\tPMID:9045837\tISS\t\tP\tubiquinone biosynthesis methyltransferase UbiE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5063\tubiE\t\tGO:0009234\tPMID:9045837\tISS\t\tP\tubiquinone biosynthesis methyltransferase UbiE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5063\tubiE\t\tGO:0008169\tPMID:9045837\tISS\t\tF\tubiquinone biosynthesis methyltransferase UbiE\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5065\tubiB\t\tGO:0006744\tPMID:10960098\tISS\t\tP\tubiquinone biosynthetic protein UbiB\tyigR|aarF|ubiB|ubiquinone biosynthetic protein UbiB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5068\ttatA\t\tGO:0043953\tPMID:17336443\tISS\t\tP\ttranslocation protein TatA\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5068\ttatA\t\tGO:0008320\tPMID:17336443\tISS\t\tF\ttranslocation protein TatA\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5068\ttatA\t\tGO:0033281\tPMID:11279240\tISS\t\tC\ttranslocation protein TatA\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5069\ttatB\t\tGO:0043953\tPMID:17336443\tISS\t\tP\ttranslocation protein TatB\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5069\ttatB\t\tGO:0008320\tPMID:17336443\tISS\t\tF\ttranslocation protein TatB\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5069\ttatB\t\tGO:0033281\tPMID:11279240\tISS\t\tC\ttranslocation protein TatB\tyigT|mttA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5070\ttatC\t\tGO:0043953\tPMID:17336443\tISS\t\tP\ttransport protein TatC\tyigU|mttB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5070\ttatC\t\tGO:0008320\tPMID:17336443\tISS\t\tF\ttransport protein TatC\tyigU|mttB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5070\ttatC\t\tGO:0033281\tPMID:11279240\tISS\t\tC\ttransport protein TatC\tyigU|mttB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5091\thutG\t\tGO:0050129\tPMID:3308850\tISS\t\tF\tN-formylglutamate amidohydrolase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5110\tfbp\t\tGO:0042132\tPMID:16670087\tISS\t\tF\tfructose-1,6-bisphosphatase\tcfxF|cbbF|fbpase|hexosediphosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5110\tfbp\t\tGO:0006094\tPMID:16670087\tISS\t\tP\tfructose-1,6-bisphosphatase\tcfxF|cbbF|fbpase|hexosediphosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5110\tfbp\t\tGO:0016208\tPMID:16670087\tISS\t\tF\tfructose-1,6-bisphosphatase\tcfxF|cbbF|fbpase|hexosediphosphatase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5119\tglnA\t\tGO:0006542\tPMID:16262797\tISS\t\tP\tglutamine synthetase\tglutamate--ammonia ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5129\tgrxC\t\tGO:0009055\tPMID:7783\tISS\t\tF\tGrxC\tgrxC|grx|GrxC|glutaredoxin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5129\tgrxC\t\tGO:0045454\tPMID:7783\tISS\t\tP\tGrxC\tgrxC|grx|GrxC|glutaredoxin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5129\tgrxC\t\tGO:0015035\tPMID:7937896\tISS\t\tF\tGrxC\tgrxC|grx|GrxC|glutaredoxin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5140\thisF1\t\tGO:0009382\tPMID:8494895\tISS\t\tC\timidazoleglycerol-phosphate synthase, cyclase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5140\thisF1\t\tGO:0000107\tPMID:8494895\tISS\t\tF\timidazoleglycerol-phosphate synthase, cyclase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5140\thisF1\t\tGO:0000105\tPMID:8494895\tISS\t\tP\timidazoleglycerol-phosphate synthase, cyclase subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5142\thisH1\t\tGO:0009382\tPMID:8494895\tISS\t\tC\tglutamine amidotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5142\thisH1\t\tGO:0000107\tPMID:8494895\tISS\t\tF\tglutamine amidotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5142\thisH1\t\tGO:0000105\tPMID:8494895\tISS\t\tP\tglutamine amidotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5143\thisB\t\tGO:0004424\tPMID:24311587\tISS\t\tF\timidazoleglycerol-phosphate dehydratase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5143\thisB\t\tGO:0000105\tPMID:24311587\tISS\t\tP\timidazoleglycerol-phosphate dehydratase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5162\trmlD\t\tGO:0019305\tPMID:10455186\tISS\t\tP\tdTDP-4-dehydrorhamnose reductase\trfbD|dTDP-6-deoxy-L-mannose dehydrogenase|dTDP-L-rhamnose synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5162\trmlD\t\tGO:0008831\tPMID:10455186\tISS\t\tF\tdTDP-4-dehydrorhamnose reductase\trfbD|dTDP-6-deoxy-L-mannose dehydrogenase|dTDP-L-rhamnose synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5162\trmlD\t\tGO:0009243\tPMID:9023210\tISS\t\tP\tdTDP-4-dehydrorhamnose reductase\trfbD|dTDP-6-deoxy-L-mannose dehydrogenase|dTDP-L-rhamnose synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5163\trmlA\t\tGO:0019305\tPMID:10455186\tISS\t\tP\tglucose-1-phosphate thymidylyltransferase\trfbA|dTDP-glucose synthase|dTDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5163\trmlA\t\tGO:0008879\tPMID:7559340\tISS\t\tF\tglucose-1-phosphate thymidylyltransferase\trfbA|dTDP-glucose synthase|dTDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5163\trmlA\t\tGO:0009243\tPMID:9023210\tISS\t\tP\tglucose-1-phosphate thymidylyltransferase\trfbA|dTDP-glucose synthase|dTDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5164\trmlC\t\tGO:0019305\tPMID:10455186\tISS\t\tP\tdTDP-4-dehydrorhamnose 3,5-epimerase\trfbC|dTDP-L-rhamnose synthetase|dTDP-4-keto-6-deoxyglucose 3,5-epimerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5164\trmlC\t\tGO:0008830\tPMID:10455186\tISS\t\tF\tdTDP-4-dehydrorhamnose 3,5-epimerase\trfbC|dTDP-L-rhamnose synthetase|dTDP-4-keto-6-deoxyglucose 3,5-epimerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5164\trmlC\t\tGO:0009243\tPMID:9023210\tISS\t\tP\tdTDP-4-dehydrorhamnose 3,5-epimerase\trfbC|dTDP-L-rhamnose synthetase|dTDP-4-keto-6-deoxyglucose 3,5-epimerase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5165\tdctB\t\tGO:0000155\tPMID:21725012\tISS\t\tF\tDctB\tDctB|dctB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5166\tdctD\t\tGO:0000156\tPMID:21725012\tISS\t\tF\tDctD\tDctD|dctD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5175\tcysQ\t\tGO:0000103\tPMID:1729235\tISS\t\tP\t3,5-bisphosphate nucleotidase CysQ\t3,5-bisphosphate nucleotidase CysQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5175\tcysQ\t\tGO:0019344\tPMID:1729235\tISS\t\tP\t3,5-bisphosphate nucleotidase CysQ\t3,5-bisphosphate nucleotidase CysQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5175\tcysQ\t\tGO:0008441\tPMID:18454554\tISS\t\tF\t3,5-bisphosphate nucleotidase CysQ\t3,5-bisphosphate nucleotidase CysQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5192\tpckA\t\tGO:0004611\tPMID:6986370\tISS\t\tF\tphosphoenolpyruvate carboxykinase\tPEPCK|PEP carboxykinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5192\tpckA\t\tGO:0006094\tPMID:6986370\tISS\t\tP\tphosphoenolpyruvate carboxykinase\tPEPCK|PEP carboxykinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5192\tpckA\t\tGO:0000287\tPMID:8448184\tISS\t\tF\tphosphoenolpyruvate carboxykinase\tPEPCK|PEP carboxykinase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5199\tamgS\t\tGO:0000155\tPMID:19706543\tISS\t\tF\tAmgS\tamgS|AmgS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5199\tamgS\t\tGO:0000160\tPMID:19706543\tISS\t\tP\tAmgS\tamgS|AmgS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5200\tamgR\t\tGO:0000156\tPMID:19706543\tISS\t\tF\tAmgR\tamgR|AmgR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5203\tgshA\t\tGO:0004357\tPMID:2895925\tISS\t\tF\tglutamate--cysteine ligase\tgamma-glutamylcysteine synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5203\tgshA\t\tGO:0006750\tPMID:2895925\tISS\t\tP\tglutamate--cysteine ligase\tgamma-glutamylcysteine synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5213\tgcvP1\t\tGO:0019464\tPMID:3023185\tISS\t\tP\tglycine cleavage system protein P1\tglycine decarboxylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5214\tgcvH1\t\tGO:0019464\tPMID:3023185\tISS\t\tP\tglycine cleavage system protein H1\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5215\tgcvT1\t\tGO:0019464\tPMID:3023185\tISS\t\tP\tglycine-cleavage system protein T1\tglycine-cleavage system protein T, tetrahydrofolate aminomethyltransferase|aminomethyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5235\tglpT\t\tGO:0015794\tPMID:3522583\tISS\t\tP\tglycerol-3-phosphate transporter\tglycerol-3-phosphate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5239\trho\t\tGO:0005524\tPMID:2461932\tISS\t\tF\ttranscription termination factor Rho\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5239\trho\t\tGO:0008186\tPMID:1098042\tISS\t\tF\ttranscription termination factor Rho\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5239\trho\t\tGO:0006353\tPMID:7509071\tISS\t\tP\ttranscription termination factor Rho\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5240\ttrxA\t\tGO:0045454\tPMID:9188456\tISS\t\tP\tthioredoxin\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5240\ttrxA\t\tGO:0015035\tPMID:10464247\tISS\t\tF\tthioredoxin\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5259\themD\t\tGO:0006779\tPMID:2557837\tISS\t\tP\turoporphyrinogen-III synthetase\thydroxymethylbilane hydrolyase (cyclizing)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5262\tfimS\t\tGO:0000155\tPMID:8790418\tISS\t\tF\tFimS\tfimS|FimS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5274\trnk\t\tGO:1900192\tPMID:7565093\tISS\t\tP\tnucleoside diphosphate kinase regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5274\trnk\t\tGO:0033674\tPMID:7565093\tISS\t\tP\tnucleoside diphosphate kinase regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5288\tglnK\t\tGO:0043562\tPMID:8843440\tISS\t\tP\tnitrogen regulatory protein P-II 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5288\tglnK\t\tGO:0006808\tPMID:9720863\tISS\t\tP\tnitrogen regulatory protein P-II 2\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5296\trep\t\tGO:0004003\tPMID:383240\tISS\t\tF\tATP-dependent DNA helicase Rep\tRep helicase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5308\tlrp\t\tGO:0006355\tPMID:10216857\tISS\t\tP\tleucine-responsive regulatory protein\tdadR, dadAX regulator|Lrp protein|transcriptional activator of dadAX DadR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5308\tlrp\t\tGO:0003700\tPMID:10216857\tISS\t\tF\tleucine-responsive regulatory protein\tdadR, dadAX regulator|Lrp protein|transcriptional activator of dadAX DadR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5312\tpauC\t\tGO:0004030\tPMID:18668238\tISS\t\tF\tAldehyde dehydrogenase\tkauB|Aldehyde dehydrogenase|pauC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5312\tpauC\t\tGO:0006598\tPMID:18668238\tISS\t\tP\tAldehyde dehydrogenase\tkauB|Aldehyde dehydrogenase|pauC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5315\trpmG\t\tGO:0006412\tPMID:9044258\tISS\t\tP\t50S ribosomal protein L33\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5315\trpmG\t\tGO:0015934\tPMID:786732\tISS\t\tC\t50S ribosomal protein L33\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5316\trpmB\t\tGO:0006412\tPMID:9044258\tISS\t\tP\t50S ribosomal protein L28\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5316\trpmB\t\tGO:0015934\tPMID:332524\tISS\t\tC\t50S ribosomal protein L28\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5331\tpyrE\t\tGO:0006221\tPMID:8501045\tISS\t\tP\torotate phosphoribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5334\trph\t\tGO:0009022\tPMID:2455297\tISS\t\tF\tribonuclease PH\ttRNA nucleotidyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5334\trph\t\tGO:0042780\tPMID:2455297\tISS\t\tP\tribonuclease PH\ttRNA nucleotidyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5360\tphoB\t\tGO:0000156\tPMID:11703664\tISS\t\tF\ttwo-component response regulator PhoB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5361\tphoR\t\tGO:0000155\tPMID:11703664\tISS\t\tF\ttwo-component sensor PhoR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5361\tphoR\t\tGO:1900231\tPMID:11703664\tISS\t\tP\ttwo-component sensor PhoR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5379\tsdaB\t\tGO:0003941\tPMID:15155761\tISS\t\tF\tL-serine dehydratase\tL-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5379\tsdaB\t\tGO:0006565\tPMID:15155761\tISS\t\tP\tL-serine dehydratase\tL-serine deaminase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5394\tcls\t\tGO:0008808\tPMID:1663113\tISS\t\tF\tcardiolipin synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5394\tcls\t\tGO:0032049\tPMID:353047\tISS\t\tP\tcardiolipin synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5410\tgbcA\t\tGO:0051537\tPMID:17951379\tISS\t\tF\tGbcA\tglycine betaine catabolism protein|gbcA|GbcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5420\tpurU2\t\tGO:0008864\tPMID:7868604\tISS\t\tF\tformyltetrahydrofolate deformylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5420\tpurU2\t\tGO:0009152\tPMID:7868604\tISS\t\tP\tformyltetrahydrofolate deformylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5434\tmtr\t\tGO:0015827\tPMID:1987112\tISS\t\tP\ttryptophan permease\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5458\tPA5458\t\tGO:0016407\tPMID:23341552\tISS\t\tF\tputative acetyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5490\tcc4\t\tGO:0009055\tPMID:17931594\tISS\t\tF\tcytochrome c4 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5493\tpolA\t\tGO:0006260\tPMID:4890764\tISS\t\tP\tDNA polymerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5493\tpolA\t\tGO:0008408\tPMID:4890764\tISS\t\tF\tDNA polymerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5493\tpolA\t\tGO:0090305\tPMID:4890764\tISS\t\tP\tDNA polymerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5493\tpolA\t\tGO:0003887\tPMID:13563462\tISS\t\tF\tDNA polymerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5498\tznuA\t\tGO:0006829\tPMID:9680209\tISS\t\tP\tZnuA\tznuA|ZnuA|probable adhesin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5500\tznuC\t\tGO:0006829\tPMID:9680209\tISS\t\tP\tzinc transport protein ZnuC\tyebM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5501\tznuB\t\tGO:0006829\tPMID:9680209\tISS\t\tP\tpermease of ABC zinc transporter ZnuB\tyebI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5511\tmifR\t\tGO:0000156\tPMID:19936057\tISS\t\tF\tMifR\tmifR|MifR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5512\tmifS\t\tGO:0000155\tPMID:19936057\tISS\t\tF\tMifS\tmifS|MifS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5549\tglmS\t\tGO:0004360\tPMID:3297136\tISS\t\tF\tglucosamine--fructose-6-phosphate aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5549\tglmS\t\tGO:0006048\tPMID:5541523\tISS\t\tP\tglucosamine--fructose-6-phosphate aminotransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5552\tglmU\t\tGO:0006048\tPMID:8407787\tISS\t\tP\tglucosamine-1-phosphate acetyltransferase/N-acetylglucosamine-1-phosphate uridyltransferase\tgcaD|UDP-N-acetylglucosamine pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5552\tglmU\t\tGO:0003977\tPMID:8555230\tISS\t\tF\tglucosamine-1-phosphate acetyltransferase/N-acetylglucosamine-1-phosphate uridyltransferase\tgcaD|UDP-N-acetylglucosamine pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5554\tatpD\t\tGO:0046961\tPMID:158358\tISS\t\tF\tATP synthase beta chain\tpapB|uncD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5554\tatpD\t\tGO:0045261\tPMID:158358\tISS\t\tC\tATP synthase beta chain\tpapB|uncD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5555\tatpG\t\tGO:0045261\tPMID:2863270\tISS\t\tC\tATP synthase gamma chain\tpapC|uncG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5555\tatpG\t\tGO:0046933\tPMID:146491\tISS\t\tF\tATP synthase gamma chain\tpapC|uncG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5555\tatpG\t\tGO:0046961\tPMID:146491\tISS\t\tF\tATP synthase gamma chain\tpapC|uncG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5556\tatpA\t\tGO:0015986\tPMID:4256722\tISS\t\tP\tATP synthase alpha chain\tpapA|uncA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5556\tatpA\t\tGO:0045261\tPMID:153904\tISS\t\tC\tATP synthase alpha chain\tpapA|uncA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5558\tatpF\t\tGO:0045263\tPMID:6460031\tISS\t\tC\tATP synthase B chain\tpapF|uncF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5558\tatpF\t\tGO:0046933\tPMID:2863271\tISS\t\tF\tATP synthase B chain\tpapF|uncF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5558\tatpF\t\tGO:0046961\tPMID:6460031\tISS\t\tF\tATP synthase B chain\tpapF|uncF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5557\tatpH\t\tGO:0045261\tPMID:6294057\tISS\t\tC\tATP synthase delta chain\tpapE|uncH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5557\tatpH\t\tGO:0046933\tPMID:6294057\tISS\t\tF\tATP synthase delta chain\tpapE|uncH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5557\tatpH\t\tGO:0046961\tPMID:6294057\tISS\t\tF\tATP synthase delta chain\tpapE|uncH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5569\trnpA\t\tGO:0008033\tPMID:2415431\tISS\t\tP\tribonuclease P protein component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5569\trnpA\t\tGO:0001682\tPMID:167017\tISS\t\tP\tribonuclease P protein component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5569\trnpA\t\tGO:0004526\tPMID:7509797\tISS\t\tF\tribonuclease P protein component\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5570\trpmH\t\tGO:0006412\tPMID:783033\tISS\t\tP\t50S ribosomal protein L34\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5564\tgidB\t\tGO:0008168\tPMID:17238915\tISS\t\tF\tglucose inhibited division protein B\tGidB protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5564\tgidB\t\tGO:0070043\tPMID:17238915\tISS\t\tF\tglucose inhibited division protein B\tGidB protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5564\tgidB\t\tGO:0070475\tPMID:17238915\tISS\t\tP\tglucose inhibited division protein B\tGidB protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5559\tatpE\t\tGO:0045263\tPMID:6460031\tISS\t\tC\tatp synthase C chain\tpapH|uncE|dicyclohexylcarbodiimide-binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5559\tatpE\t\tGO:0046933\tPMID:2863271\tISS\t\tF\tatp synthase C chain\tpapH|uncE|dicyclohexylcarbodiimide-binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5559\tatpE\t\tGO:0046961\tPMID:6460031\tISS\t\tF\tatp synthase C chain\tpapH|uncE|dicyclohexylcarbodiimide-binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5560\tatpB\t\tGO:0045263\tPMID:6460031\tISS\t\tC\tATP synthase A chain\tpapD|uncB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5560\tatpB\t\tGO:0046933\tPMID:2863271\tISS\t\tF\tATP synthase A chain\tpapD|uncB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5560\tatpB\t\tGO:0046961\tPMID:2863271\tISS\t\tF\tATP synthase A chain\tpapD|uncB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0001\tdnaA\t\tGO:0006260\tPMID:12068813\tISS\t\tP\tchromosomal replication initiator protein DnaA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0001\tdnaA\t\tGO:0003677\tPMID:7615570\tISS\t\tF\tchromosomal replication initiator protein DnaA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0001\tdnaA\t\tGO:0003688\tPMID:19833870\tISS\t\tF\tchromosomal replication initiator protein DnaA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0001\tdnaA\t\tGO:0043565\tPMID:10551881\tISS\t\tF\tchromosomal replication initiator protein DnaA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0003\trecF\t\tGO:0000731\tPMID:9108043\tISS\t\tP\tRecF protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0003\trecF\t\tGO:0009411\tPMID:9108043\tISS\t\tP\tRecF protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0005524\tPMID:9756859\tISS\t\tF\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0006265\tPMID:6327603\tISS\t\tP\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0042493\tPMID:9144789\tISS\t\tP\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0006351\tPMID:15535863\tISS\t\tP\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0003677\tPMID:6294616\tISS\t\tF\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0003918\tPMID:368801\tISS\t\tF\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0010\ttag\t\tGO:0008725\tPMID:3536857\tISS\t\tF\tDNA-3-methyladenine glycosidase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0018\tfmt\t\tGO:0071951\tPMID:6989606\tISS\t\tP\tmethionyl-tRNA formyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0025\taroE\t\tGO:0000162\tPMID:3277621\tISS\t\tP\tshikimate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0025\taroE\t\tGO:0006520\tPMID:3277621\tISS\t\tP\tshikimate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0025\taroE\t\tGO:0006571\tPMID:3277621\tISS\t\tP\tshikimate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0025\taroE\t\tGO:0009094\tPMID:3277621\tISS\t\tP\tshikimate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0025\taroE\t\tGO:0004764\tPMID:3277621\tISS\t\tF\tshikimate dehydrogenase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5227.1\tssrS\t\tGO:0070063\tPMID:2438656\tISS\t\tF\t6S RNA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5227.1\tssrS\t\tGO:0070063\tPMID:20829285\tISS\t\tF\t6S RNA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5227.1\tssrS\t\tGO:0003899\tPMID:2438656\tISS\t\tF\t6S RNA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5227.1\tssrS\t\tGO:0003899\tPMID:20829285\tISS\t\tF\t6S RNA\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0019305\tPMID:10455186\tISS\t\tP\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0008460\tPMID:7559340\tISS\t\tF\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5161\trmlB\t\tGO:0009243\tPMID:9023210\tISS\t\tP\tdTDP-D-glucose 4,6-dehydratase\trmlB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            }
        ],
        "gorule-0000064": [],
        "gorule-0000013": [
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1532\tdnaX\t\tGO:0043846\tPMID:15611049\tIDA\t\tC\tDNA polymerase subunits gamma and tau\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000013: Taxon-appropriate annotation check",
                "obj": "",
                "taxon": "",
                "rule": 13
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1816\tdnaQ\t\tGO:0043845\tPMID:9705512\tISS\t\tC\tDNA polymerase III, epsilon chain\tmutD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000013: Taxon-appropriate annotation check",
                "obj": "",
                "taxon": "",
                "rule": 13
            }
        ],
        "gorule-0000020": [
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1982\texaA\t\tGO:0006069\tPMID:10075429\tIDA\t\tP\tquinoprotein ethanol dehydrogenase\tquinoprotein alcohol dehydrogenase|quinoprotein ethanol dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0006069",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1983\texaB\t\tGO:0006069\tPMID:10075429\tIMP\t\tP\tcytochrome c550\tcytochrome c(EDH)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0006069",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1984\texaC\t\tGO:0006069\tPMID:10075429\tISS\t\tP\tNAD+ dependent aldehyde dehydrogenase ExaC\texaC1|exaC|NAD+ dependent aldehyde dehydrogenase ExaC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0006069",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4640\tmqoB\t\tGO:0006069\tPMID:12480887\tIDA\t\tP\tmalate:quinone oxidoreductase\tmalate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0006069",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4640\tmqoB\t\tGO:0006069\tPMID:12480887\tIMP\t\tP\tmalate:quinone oxidoreductase\tmalate dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0006069",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4727\tpcnB\t\tGO:0006378\tPMID:20482591\tISS\t\tP\tpoly(A) polymerase\tplasmid copy number protein|polynucleotide adenylyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0006378",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2570\tlecA\t\tGO:0006928\tPMID:16689730\tIDA\t\tP\tLecA\tpa1L|PA-I galactophilic lectin|lecA (changed from pa1L)|LecA (changed from PA-I galactophilic lectin)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0006928",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3805\tpilF\t\tGO:0006928\tPMID:23547883\tIMP\t\tP\ttype 4 fimbrial biogenesis protein PilF\tpilin biosynthetic gene PilF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0006928",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0510\tnirE\t\tGO:0009108\tPMID:19754882\tIMP\t\tP\tNirE\tnirE|NirE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009108",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0512\tnirH\t\tGO:0009108\tPMID:8982003\tIMP\t\tP\tNirH\tnirH|NirH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009108",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0513\tnirG\t\tGO:0009108\tPMID:8982003\tIMP\t\tP\tNirG\tnirG|NirG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009108",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0093\ttse6\t\tGO:0009405\tPMID:24794869\tIMP\t\tP\tTse6\tTse6|tse6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0093\ttse6\t\tGO:0009405\tPMID:24589350\tIDA\t\tP\tTse6\tTse6|tse6\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0099\tPA0099\t\tGO:0009405\tPMID:24794869\tIMP\t\tP\ttype VI effector protein\ttype VI effector protein|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0328\taaaA\t\tGO:0009405\tPMID:22927813\tIMP\t\tP\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA\targinine-specific autotransporter of Pseudomonas aeruginosa, AaaA|aaaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0652\tvfr\t\tGO:0009405\tPMID:14977975\tIMP\t\tP\ttranscriptional regulator Vfr\tcyclic AMP receptor-like protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0675\tvreI\t\tGO:0009405\tPMID:19730690\tIMP\t\tP\tECF sigma factor, VreI\tvreI|ECF sigma factor, VreI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0690\tpdtA\t\tGO:0009405\tPMID:25009238\tIMP\t\tP\tphosphate depletion regulated TPS partner A, PdtA\tPdtA|pdtA|phosphate depletion regulated TPS partner A, PdtA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0762\talgU\t\tGO:0009405\tPMID:8698507\tIMP\t\tP\tsigma factor AlgU\talgT|sigma factor AlgT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:23667230\tIMP\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:21562128\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:21562128\tIMP\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:21041488\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:2496027\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0009405\tPMID:8282618\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0905\trsmA\t\tGO:0009405\tPMID:16622241\tIMP\t\tP\tRsmA\tcsrA|carbon storage regulator|RsmA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0934\trelA\t\tGO:0009405\tPMID:15385461\tIMP\t\tP\tGTP pyrophosphokinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1006\tPA1006\t\tGO:0009405\tPMID:23409004\tIMP\t\tP\tProtein PA1006\tyrkI|Protein PA1006|conserved hypothetical protein|YhhP/TusA homolog\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1249\taprA\t\tGO:0009405\tPMID:22131330\tIDA\t\tP\talkaline metalloproteinase precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1423\tbdlA\t\tGO:0009405\tPMID:24901523\tIMP\t\tP\tBdlA\tbiofilm dispersion locus A|bdlA|BdlA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1430\tlasR\t\tGO:0009405\tPMID:8454322\tIMP\t\tP\ttranscriptional regulator LasR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1587\tlpd\t\tGO:0009405\tPMID:23071278\tIDA\t\tP\tdihydrolipoamide dehydrogenase Lpd\tlpdA|LPD-GLC, L-factor for glycine oxidation system|dihydrolipoamide dehydrogenase (E3 subunit)|dihydrolipoamide dehydrogenase Lpd|lpd\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0009405\tPMID:23145092\tIMP\t\tP\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1920\tnrdD\t\tGO:0009405\tPMID:17481950\tIMP\t\tP\tclass III (anaerobic) ribonucleoside-triphosphate reductase subunit, NrdD\tnrdD|class III (anaerobic) ribonucleoside-triphosphate reductase subunit, NrdD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1954\tfapC\t\tGO:0009405\tPMID:17481950\tIMP\t\tP\tFapC\tFapC|fapC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2023\tgalU\t\tGO:0009405\tPMID:15213167\tIMP\t\tP\tUTP--glucose-1-phosphate uridylyltransferase\tgtaB|hasC|glucose-1-phosphate uridylyltransferase|UDP-glucose pyrophosphorylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2128\tcupA1\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tfimbrial subunit CupA1\tprobable fimbrial protein (precursor)|component of adhesin|cupA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2129\tcupA2\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tchaperone CupA2\tprobable pili assembly chaperone|component of adhesin|cupA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2130\tcupA3\t\tGO:0009405\tPMID:19047519\tIMP\t\tP\tusher CupA3\tprobable fimbrial biogenesis usher protein|cupA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2130\tcupA3\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tusher CupA3\tprobable fimbrial biogenesis usher protein|cupA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2131\tcupA4\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tfimbrial subunit CupA4\tcupA4|fimbrial subunit CupA4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2132\tcupA5\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tchaperone CupA5\tprobable pili assembly chaperone|cupA5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2133\tPA2133\t\tGO:0009405\tPMID:24039572\tIMP\t\tP\tCyclic-guanylate-specific phosphodiesterase\tCyclic-guanylate-specific phosphodiesterase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0009405\tPMID:19778968\tIMP\t\tP\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2634\taceA\t\tGO:0009405\tPMID:18524916\tIMP\t\tP\tisocitrate lyase AceA\taceA|isocitrate lyase|isocitrate lyase AceA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2684\ttse5\t\tGO:0009405\tPMID:24794869\tIMP\t\tP\tTse5\trhs|rhsP1|RhsP1|Tse5|tse5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2684\ttse5\t\tGO:0009405\tPMID:24589350\tIDA\t\tP\tTse5\trhs|rhsP1|RhsP1|Tse5|tse5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2827\tPA2827\t\tGO:0009405\tPMID:23687271\tIMP\t\tP\tconserved hypothetical protein\tyeaA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2877\tPA2877\t\tGO:0009405\tPMID:24829363\tIMP\t\tP\tprobable transcriptional regulator\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2934\tcif\t\tGO:0009405\tPMID:16236828\tIDA\t\tP\tCFTR inhibitory factor, Cif\tcif|CFTR inhibitory factor, Cif\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3217\tcyaB\t\tGO:0009405\tPMID:14977975\tIMP\t\tP\tCyaB\tadenylate cyclase|cyaB|CyaB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0009405\tPMID:20709902\tIMP\t\tP\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4102\tbfmS\t\tGO:0009405\tPMID:25166864\tIMP\t\tP\tBfmS\tbfmS|BfmS\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0009405\tPMID:10377148\tIMP\t\tP\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4725\tcbrA\t\tGO:0009405\tPMID:24379284\tISO\tPseudoCAP:PA14_62530\tP\ttwo-component sensor CbrA\tcbrA|two-component sensor CbrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4944\thfq\t\tGO:0009405\tPMID:14521880\tIMP\t\tP\tHfq\thfq|Hfq\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5017\tdipA\t\tGO:0009405\tPMID:24901523\tIMP\t\tP\tDipA\tDipA|dipA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5018\tmsrA\t\tGO:0009405\tPMID:23687271\tIMP\t\tP\tpeptide methionine sulfoxide reductase\tpmsR|peptide met(o) reductase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5134\tctpA\t\tGO:0009405\tPMID:24082078\tIMP\t\tP\tcarboxyl-terminal processing protease, CtpA\tctpA|carboxyl-terminal processing protease, CtpA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5224\tpepP\t\tGO:0009405\tPMID:22911607\tIMP\t\tP\taminopeptidase P\tproline aminopeptidase|X-Pro aminopeptidase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5241\tppx\t\tGO:0009405\tPMID:24275100\tIMP\t\tP\texopolyphosphatase\tgppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5272\tcyaA\t\tGO:0009405\tPMID:14977975\tIMP\t\tP\tadenylate cyclase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5322\talgC\t\tGO:0009405\tPMID:7558335\tIMP\t\tP\tphosphomannomutase AlgC\tpmm\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5325\tsphA\t\tGO:0009405\tPMID:24465209\tIMP\t\tP\tSphA\tSphA|sphA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5332\tcrc\t\tGO:0009405\tPMID:20626455\tIMP\t\tP\tcatabolite repression control protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5531\ttonB1\t\tGO:0009405\tPMID:10899848\tIMP\t\tP\tTonB1\ttonB|TonB|tonB1|TonB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5125.1\tnrsZ\t\tGO:0009405\tPMID:24308329\tIMP\t\tP\tnitrogen-regulated sRNA, NrsZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5125.1\tnrsZ\t\tGO:0009405\tPMID:24308329\tIMP\t\tP\tnitrogen-regulated sRNA, NrsZ\t\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0009405",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0015299\tPMID:24023388\tIDA\t\tF\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0015299",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1361\tnorM\t\tGO:0015307\tPMID:14679249\tIDA\t\tF\tNorM\tydhE|norM|NorM|pmpM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0015307",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5294\tPA5294\t\tGO:0015307\tPMID:14679249\tISS\tUniProtKB:O82855\tF\tputative multidrug efflux pump\tputative multidrug efflux pump|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0015307",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5235\tglpT\t\tGO:0042891\tPMID:19734311\tIMP\t\tP\tglycerol-3-phosphate transporter\tglycerol-3-phosphate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0042891",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5235\tglpT\t\tGO:0042895\tPMID:19734311\tIMP\t\tF\tglycerol-3-phosphate transporter\tglycerol-3-phosphate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0042895",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0652\tvfr\t\tGO:0043902\tPMID:9190808\tIMP\t\tP\ttranscriptional regulator Vfr\tcyclic AMP receptor-like protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0043902",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1003\tmvfR\t\tGO:0043902\tPMID:15686549\tIMP\t\tP\tTranscriptional regulator MvfR\tpqsR|Transcriptional regulator MvfR|mvfR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0043902",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2227\tvqsM\t\tGO:0043902\tPMID:16194239\tIMP\t\tP\tAraC-type transcriptional regulator VqsM\tvqsM|AraC-type transcriptional regulator VqsM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0043902",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2523\tczcR\t\tGO:0043902\tPMID:22666466\tIMP\t\tP\tCzcR\tCzcR|czcR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0043902",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2591\tvqsR\t\tGO:0043902\tPMID:15073293\tIMP\t\tP\tVqsR\tvqsR|VqsR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0043902",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3816\tcysE\t\tGO:0051188\tPMID:7510287\tISS\t\tP\tO-acetylserine synthase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0051188",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3996\tlis\t\tGO:0051188\tPMID:8444795\tISS\t\tP\tlipoate synthase\tlipA|lipoic acid synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0051188",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1431\trsaL\t\tGO:0051713\tPMID:19878323\tIMP\t\tP\tregulatory protein RsaL\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0051713",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0572\tPA0572\t\tGO:0052051\tPMID:22309196\tIDA\t\tP\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0052051",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0844\tplcH\t\tGO:0052051\tPMID:2120196\tIDA\t\tP\themolytic phospholipase C precursor\tphlC|plcS|sphingomyelin synthase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0052051",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0852\tcbpD\t\tGO:0052051\tPMID:10671445\tIDA\t\tP\tchitin-binding protein CbpD precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0052051",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1948\trbsC\t\tGO:0052051\tPMID:3148812\tIDA\t\tP\tmembrane protein component of ABC ribose transporter\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0052051",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA3724\tlasB\t\tGO:0052051\tPMID:15123664\tIDA\t\tP\telastase LasB\tneutral metalloproteinase|pseudolysin precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0052051",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0538\tdsbB\t\tGO:0055114\tPMID:24327342\tIMP\t\tP\tdisulfide bond formation protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0055114",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1024\tPA1024\t\tGO:0055114\tPMID:27502282\tIDA\t\tP\tNADH:quinone reductase\t2-Nitropropane Dioxygenase (changed from hypothetical protein)|NADH:quinone reductase|2-Nitropropane Dioxygenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0055114",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA5256\tdsbH\t\tGO:0055114\tPMID:24327342\tIMP\t\tP\tdisulfide bond formation protein\tdsbB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0055114",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2652\tPA2652\t\tGO:0071310\tPMID:17933940\tIMP\t\tP\tmethyl-accepting chemotaxis protein\tmethyl-accepting chemotaxis protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0071310",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA0094\teagT6\t\tGO:0072321\tPMID:26456113\tIDA\t\tP\tEagT6\teagT6|EagT6|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0072321",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA2138\tligD\t\tGO:0090503\tPMID:15897197\tIDA\t\tP\tMultifunctional non-homologous end joining protein LigD\tligD|Multifunctional non-homologous end joining protein LigD|probable ATP-dependent DNA ligase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0090503",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA4625\tcdrA\t\tGO:0097312\tPMID:20088866\tIDA\t\tC\tcyclic diguanylate-regulated TPS partner A, CdrA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0097312",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:1900275\tPMID:25073853\tIMP\t\tP\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:1900275",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4596\tesrC\t\tGO:0000975\tPMID:25143244\tIDA\t\tF\tEsrC\tEsrC|esrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0000975",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0000986\tPMID:24603766\tIDA\t\tF\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0000986",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0001150\tPMID:8899712\tIDA\t\tF\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0001150",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5296\trep\t\tGO:0004003\tPMID:383240\tISS\t\tF\tATP-dependent DNA helicase Rep\tRep helicase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0004003",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1757\tthrH\t\tGO:0004647\tPMID:10220164\tIGI\t\tF\thomoserine kinase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0004647",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4727\tpcnB\t\tGO:0004652\tPMID:20482591\tISS\t\tF\tpoly(A) polymerase\tplasmid copy number protein|polynucleotide adenylyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0004652",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1006\tPA1006\t\tGO:0006875\tPMID:23409003\tIMP\t\tP\tProtein PA1006\tyrkI|Protein PA1006|conserved hypothetical protein|YhhP/TusA homolog\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0006875",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1610\tfabA\t\tGO:0008693\tPMID:8910376\tISS\t\tF\tbeta-hydroxydecanoyl-ACP dehydrase\tFabA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0008693",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4406\tlpxC\t\tGO:0008759\tPMID:9068651\tIDA\t\tF\tUDP-3-O-acyl-N-acetylglucosamine deacetylase\tasmB|envA|EnvA protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0008759",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2545\txthA\t\tGO:0008853\tPMID:7885481\tISS\t\tF\texodeoxyribonuclease III\texonuclease III\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0008853",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4937\trnr\t\tGO:0008997\tPMID:11948193\tISS\t\tF\texoribonuclease RNase R\tvacB|virulence protein VacB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0008997",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3583\tglpR\t\tGO:0010677\tPMID:8752340\tIMP\t\tP\tglycerol-3-phosphate regulon repressor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0010677",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2667\tmvaU\t\tGO:0010963\tPMID:19684136\tIMP\t\tP\tMvaU\tMvaU|mvaU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0010963",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4315\tmvaT\t\tGO:0010963\tPMID:19684136\tIMP\t\tP\ttranscriptional regulator MvaT, P16 subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0010963",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1807\tnppD\t\tGO:0015198\tPMID:23979749\tIMP\t\tF\tNppD\tnppD|NppD|probable ATP-binding component of ABC transporter|oppE\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015198",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1810\tnppA2\t\tGO:0015198\tPMID:23979749\tIMP\t\tF\tNppA2\tnppA2|NppA2|probable binding protein component of ABC transporter|oppB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015198",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1811\tnppA1\t\tGO:0015198\tPMID:23979749\tIMP\t\tF\tNppA1\tnppA1|NppA1|probable solute-binding protein|oppA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015198",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0425\tmexA\t\tGO:0015238\tPMID:8540696\tIMP\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexA precursor\tRND multidrug efflux membrane fusion protein MexA precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0425\tmexA\t\tGO:0015238\tPMID:8540696\tIMP\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexA precursor\tRND multidrug efflux membrane fusion protein MexA precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0426\tmexB\t\tGO:0015238\tPMID:8540696\tIGC\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexB\tRND multidrug efflux transporter MexB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0427\toprM\t\tGO:0015238\tPMID:8540696\tIMP\t\tF\tMajor intrinsic multiple antibiotic resistance efflux outer membrane protein OprM precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1361\tnorM\t\tGO:0015238\tPMID:9661020\tISS\t\tF\tNorM\tydhE|norM|NorM|pmpM\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0015238\tPMID:10543738\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0015238\tPMID:9925549\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2019\tmexX\t\tGO:0015238\tPMID:10543738\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tamrA|mexX|mexG|RND multidrug efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2019\tmexX\t\tGO:0015238\tPMID:9925549\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tamrA|mexX|mexG|RND multidrug efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2493\tmexE\t\tGO:0015238\tPMID:9044268\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexE precursor\tRND multidrug efflux membrane fusion protein MexE precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2494\tmexF\t\tGO:0015238\tPMID:9044268\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexF\tRND multidrug efflux transporter MexF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2495\toprN\t\tGO:0015238\tPMID:9044268\tIDA\t\tF\tMultidrug efflux outer membrane protein OprN precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4206\tmexH\t\tGO:0015238\tPMID:12937010\tIDA\t\tF\tprobable Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein precursor\tprobable RND efflux membrane fusion protein precursor|mexH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4207\tmexI\t\tGO:0015238\tPMID:12937010\tIDA\t\tF\tprobable Resistance-Nodulation-Cell Division (RND) efflux transporter\tprobable RND efflux transporter|mexI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4208\topmD\t\tGO:0015238\tPMID:12937010\tIDA\t\tF\tprobable outer membrane protein precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4374\tmexV\t\tGO:0015238\tPMID:12951344\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexV\tprobable RND efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexV|mexV\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4375\tmexW\t\tGO:0015238\tPMID:12951344\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexW\tprobable RND efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexW|mexW\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4597\toprJ\t\tGO:0015238\tPMID:8878035\tIDA\t\tF\tMultidrug efflux outer membrane protein OprJ precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4598\tmexD\t\tGO:0015238\tPMID:8878035\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexD\tRND multidrug efflux transporter MexD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4599\tmexC\t\tGO:0015238\tPMID:8878035\tIDA\t\tF\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexC precursor\tRND multidrug efflux membrane fusion protein MexC precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5294\tPA5294\t\tGO:0015238\tPMID:14679249\tISS\tUniProtKB:O82855\tF\tputative multidrug efflux pump\tputative multidrug efflux pump|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015238",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3901\tfecA\t\tGO:0015682\tPMID:8471824\tISS\t\tP\tFe(III) dicitrate transport protein FecA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015682",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4687\thitA\t\tGO:0015682\tPMID:9360608\tISS\t\tP\tferric iron-binding periplasmic protein HitA\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015682",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5531\ttonB1\t\tGO:0015683\tPMID:10899848\tIMP\t\tP\tTonB1\ttonB|TonB|tonB1|TonB1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015683",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2322\tgntP\t\tGO:0015725\tPMID:9045817\tISS\t\tP\tGntP\tgntU|gntT|gnuT|gntP|GntP|gluconate permease|gluconate permease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015725",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0595\tlptD\t\tGO:0015921\tPMID:20167788\tIDA\t\tP\tLPS-assembly protein LptD\timp|lptD|ostA|LPS-assembly protein LptD|organic solvent tolerance protein OstA precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015921",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0595\tlptD\t\tGO:0015921\tPMID:25735820\tIDA\t\tP\tLPS-assembly protein LptD\timp|lptD|ostA|LPS-assembly protein LptD|organic solvent tolerance protein OstA precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015921",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3827\tlptG\t\tGO:0015921\tPMID:18375759\tISS\tUniProtKB:P0ADC6\tP\tLipopolysaccharide export system permease protein LptG\tyjgQ|lptG|Lipopolysaccharide export system permease protein LptG\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015921",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3828\tlptF\t\tGO:0015921\tPMID:18375759\tISS\tUniProtKB:P0AF98\tP\tLipopolysaccharide export system permease protein LptF\tyjgP|lptF|Lipopolysaccharide export system permease protein LptF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015921",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3988\tlptE\t\tGO:0015921\tPMID:24990751\tISS\tUniProtKB:P0ADC1\tP\tLPS-assembly lipoprotein LptE\tlptE|LPS-assembly lipoprotein LptE|hypothetical protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015921",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4459\tlptC\t\tGO:0015921\tPMID:23138981\tISS\tUniProtKB:P0ADV9\tP\tLipopolysaccharide export system protein LptC\tyrbK|lptC|Lipopolysaccharide export system protein LptC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015921",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4460\tlptH\t\tGO:0015921\tPMID:25735820\tIDA\t\tP\tLptH\tyhbN|lptH|LptH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015921",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4461\tlptB\t\tGO:0015921\tPMID:17056748\tISS\tUniProtKB:P0A9V1\tP\tLipopolysaccharide export system ATP-binding protein LptB\tyhbG|lptB|Lipopolysaccharide export system ATP-binding protein LptB|probable ATP-binding component of ABC transporter\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015921",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3153\twzx\t\tGO:0015992\tPMID:24023388\tIDA\t\tP\tO-antigen translocase\trfbX|wbpF|O-antigen flippase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0015992",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1178\toprH\t\tGO:0016021\tPMID:2498288\tIDA\t\tC\tPhoP/Q and low Mg2+ inducible outer membrane protein H1 precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0016021",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1447\tfliQ\t\tGO:0016021\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0016021",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1448\tfliR\t\tGO:0016021\tPMID:8282695\tISS\t\tC\tflagellar biosynthetic protein FliR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0016021",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3933\tbetT3\t\tGO:0016021\tPMID:21478341\tIDA\t\tC\tBetT3\tbetT3|BetT3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0016021",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5291\tbetT2\t\tGO:0016021\tPMID:18156257\tIDA\t\tC\tBetT2\tbetT2|BetT2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0016021",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5375\tbetT1\t\tGO:0016021\tPMID:21478341\tIDA\t\tC\tBetT1\tBetT1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0016021",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4525\tpilA\t\tGO:0016337\tPMID:2897336\tIDA\t\tP\ttype 4 fimbrial precursor PilA\ttype IV pilin\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0016337",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1982\texaA\t\tGO:0018468\tPMID:9826187\tIDA\t\tF\tquinoprotein ethanol dehydrogenase\tquinoprotein alcohol dehydrogenase|quinoprotein ethanol dehydrogenase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0018468",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4771\tlldD\t\tGO:0019516\tPMID:8407843\tISS\t\tP\tL-lactate dehydrogenase\tlctD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0019516",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1587\tlpd\t\tGO:0020012\tPMID:23071278\tIDA\t\tP\tdihydrolipoamide dehydrogenase Lpd\tlpdA|LPD-GLC, L-factor for glycine oxidation system|dihydrolipoamide dehydrogenase (E3 subunit)|dihydrolipoamide dehydrogenase Lpd|lpd\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0020012",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2755\teco\t\tGO:0020012\tPMID:29636440\tIDA\t\tP\tecotin precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0020012",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3560\tfruA\t\tGO:0032445\tPMID:18833300\tIMP\t\tP\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tphosphotransferase system transporter fructose-specific IIBC component, FruA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0032445",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3562\tfruI\t\tGO:0032445\tPMID:18833300\tIMP\t\tP\tphosphotransferase system transporter enzyme I, FruI\tfruI|ptsI|phosphotransferase system transporter enzyme I, FruI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0032445",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1079\tflgD\t\tGO:0032947\tPMID:8157595\tISS\t\tF\tflagellar basal-body rod modification protein FlgD\tflagellar hook cap (scaffold)\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0032947",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2585\tuvrC\t\tGO:0033683\tPMID:2843804\tISS\t\tP\texcinuclease ABC subunit C\tUvrABC endonuclease subunit C|UvrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0033683",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1803\tlon\t\tGO:0042493\tPMID:17893152\tIMP\t\tP\tLon protease\tlopA|muc|deg|capR|CapR protein|Atp-dependent protease La\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2018\tmexY\t\tGO:0042493\tPMID:16030228\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tamrB|mexY|mexH|RND multidrug efflux transporter|Resistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexY\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2019\tmexX\t\tGO:0042493\tPMID:16030228\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tamrA|mexX|mexG|RND multidrug efflux membrane fusion protein precursor|Resistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexX precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3257\talgO\t\tGO:0042493\tPMID:1447154\tISS\t\tP\tAlgO\ttsp|algO|prc|AlgO|periplasmic tail-specific protease\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4596\tesrC\t\tGO:0042493\tPMID:25143244\tEXP\t\tP\tEsrC\tEsrC|esrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4597\toprJ\t\tGO:0042493\tPMID:12654738\tEXP\t\tP\tMultidrug efflux outer membrane protein OprJ precursor\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4598\tmexD\t\tGO:0042493\tPMID:12654738\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux transporter MexD\tRND multidrug efflux transporter MexD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4599\tmexC\t\tGO:0042493\tPMID:12654738\tEXP\t\tP\tResistance-Nodulation-Cell Division (RND) multidrug efflux membrane fusion protein MexC precursor\tRND multidrug efflux membrane fusion protein MexC precursor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5009\twaaP\t\tGO:0042493\tPMID:11741974\tIMP\t\tP\tlipopolysaccharide kinase WaaP\trfaP|RfaP protein|heptose kinase WaaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5009\twaaP\t\tGO:0042493\tPMID:10692150\tIMP\t\tP\tlipopolysaccharide kinase WaaP\trfaP|RfaP protein|heptose kinase WaaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5009\twaaP\t\tGO:0042493\tPMID:21810964\tIDA\t\tP\tlipopolysaccharide kinase WaaP\trfaP|RfaP protein|heptose kinase WaaP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5470\tPA5470\t\tGO:0042493\tPMID:16484195\tEXP\t\tP\tprobable peptide chain release factor\tprfH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5471\tarmZ\t\tGO:0042493\tPMID:16484195\tEXP\t\tP\tArmZ\tArmZ|armZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0004\tgyrB\t\tGO:0042493\tPMID:9144789\tISS\t\tP\tDNA gyrase subunit B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042493",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4496\tdppA1\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tprobable binding protein component of ABC transporter\tdppA1\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042936",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4497\tdppA2\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tprobable binding protein component of ABC transporter\tdppA2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042936",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4500\tdppA3\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tprobable binding protein component of ABC transporter\tdppA3\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042936",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4501\topdD\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tGlycine-glutamate dipeptide porin OpdP\topdP|Glycine-glutamate dipeptide porin OpdP\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042936",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4502\tdppA4\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tprobable binding protein component of ABC transporter\tdppA4\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042936",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5317\tdppA5\t\tGO:0042936\tPMID:25338022\tIDA\t\tF\tprobable binding protein component of ABC dipeptide transporter\tdppA5\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0042936",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4283\trecD\t\tGO:0043142\tPMID:9092551\tISS\t\tF\texodeoxyribonuclease V alpha chain\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0043142",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0424\tmexR\t\tGO:0044212\tPMID:11208776\tIDA\t\tF\tmultidrug resistance operon repressor MexR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1003\tmvfR\t\tGO:0044212\tPMID:16735731\tIDA\t\tF\tTranscriptional regulator MvfR\tpqsR|Transcriptional regulator MvfR|mvfR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1544\tanr\t\tGO:0044212\tPMID:1900277\tIDA\t\tF\ttranscriptional regulator Anr\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1713\texsA\t\tGO:0044212\tPMID:7635828\tIDA\t\tF\ttranscriptional regulator ExsA\tS synthesis trans-regulatory protein ExsA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1754\tcysB\t\tGO:0044212\tPMID:20370820\tIDA\t\tF\ttranscriptional regulator CysB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1898\tqscR\t\tGO:0044212\tPMID:16390453\tIDA\t\tF\tquorum-sensing control repressor\tphzR|qscR|quorum-sensing control repressor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2005\thbcR\t\tGO:0044212\tPMID:26311173\tIDA\t\tF\tHbcR\thbcR|HbcR|probable transcriptional regulator|(R)-3-hydroxybutyrate catabolism regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2020\tmexZ\t\tGO:0044212\tPMID:15336398\tIDA\t\tF\tMexZ\tamrR|mexZ|MexZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2126\tcgrC\t\tGO:0044212\tPMID:21926232\tIDA\t\tF\tcupA gene regulator C, CgrC\tcupA gene regulator C, CgrC|cgrC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2127\tcgrA\t\tGO:0044212\tPMID:21926232\tIDA\t\tF\tcupA gene regulator A, CgrA\tcupA gene regulator A, CgrA|cgrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2206\tPA2206\t\tGO:0044212\tPMID:23382903\tIDA\t\tF\tLysR-type transcriptional regulator\tLysR-type transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2258\tptxR\t\tGO:0044212\tPMID:22844393\tIDA\t\tF\ttranscriptional regulator PtxR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2492\tmexT\t\tGO:0044212\tPMID:20727012\tIDA\t\tF\ttranscriptional regulator MexT\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2511\tantR\t\tGO:0044212\tPMID:18424436\tIDA\t\tF\tAntR\tantR|AntR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2667\tmvaU\t\tGO:0044212\tPMID:19684136\tIDA\t\tF\tMvaU\tMvaU|mvaU\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2686\tpfeR\t\tGO:0044212\tPMID:8361354\tIDA\t\tF\ttwo-component response regulator PfeR\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2849\tohrR\t\tGO:0044212\tPMID:20139188\tIDA\t\tF\tOhrR\tohrR|OhrR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2931\tcifR\t\tGO:0044212\tPMID:18458065\tIDA\t\tF\tCifR\tcifR|CifR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3006\tpsrA\t\tGO:0044212\tPMID:16428760\tIDA\t\tF\ttranscriptional regulator PsrA\tpsrA|transcriptional regulator PsrA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3225\tPA3225\t\tGO:0044212\tPMID:28584154\tIDA\t\tF\ttranscriptional regulator\ttranscriptional regulator|probable transcriptional regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3385\tamrZ\t\tGO:0044212\tPMID:16952938\tIDA\t\tF\talginate and motility regulator Z\tamrZ|alginate and motility regulator Z|algZ|AlgZ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3574\tnalD\t\tGO:0044212\tPMID:17028276\tIDA\t\tF\tNalD\tnalD|NalD\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3721\tnalC\t\tGO:0044212\tPMID:22393435\tIDA\t\tF\tNalC\tnalC|NalC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3757\tnagR\t\tGO:0044212\tPMID:21169497\tIDA\t\tF\tTranscriptional regulator of N-Acetylglucosamine catabolism operon\tTranscriptional regulator of N-Acetylglucosamine catabolism operon|nagR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4296\tpprB\t\tGO:0044212\tPMID:21091863\tIDA\t\tF\ttwo-component response regulator, PprB\tpprB|two-component response regulator, PprB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4315\tmvaT\t\tGO:0044212\tPMID:19684136\tIDA\t\tF\ttranscriptional regulator MvaT, P16 subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4354\tPA4354\t\tGO:0044212\tPMID:22820840\tIDA\t\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4493\troxR\t\tGO:0044212\tPMID:12139621\tIDA\t\tF\tRoxR\troxR|RoxR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4600\tnfxB\t\tGO:0044212\tPMID:23924707\tIDA\t\tF\ttranscriptional regulator NfxB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4764\tfur\t\tGO:0044212\tPMID:8522528\tIDA\t\tF\tferric uptake regulation protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4778\tcueR\t\tGO:0044212\tPMID:20233934\tIDA\t\tF\tCueR\tybbI|cueR|CueR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5324\tsphR\t\tGO:0044212\tPMID:24465209\tIDA\t\tF\tSphingosine-responsive Regulator, SphR\tSphingosine-responsive Regulator, SphR|sphR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5344\toxyR\t\tGO:0044212\tPMID:19933365\tIDA\t\tF\tOxyR\toxyR|OxyR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5345\trecG\t\tGO:0044212\tPMID:22621928\tIDA\t\tF\tATP-dependent DNA helicase RecG\tRecG protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5483\talgB\t\tGO:0044212\tPMID:17981963\tIDA\t\tF\ttwo-component response regulator AlgB\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044212",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2738\thimA\t\tGO:0044267\tPMID:7867950\tISS\t\tP\tintegration host factor, alpha subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044267",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3161\thimD\t\tGO:0044267\tPMID:8892836\tISS\t\tP\tintegration host factor beta subunit\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044267",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3227\tppiA\t\tGO:0044267\tPMID:2007139\tISS\t\tP\tpeptidyl-prolyl cis-trans isomerase A\tcypH|Rotamase A, PPIase A|Cyclophilin A\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044267",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3624\tpcm\t\tGO:0044267\tPMID:9573145\tISS\t\tP\tL-isoaspartate protein carboxylmethyltransferase type II\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044267",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3635\teno\t\tGO:0044267\tPMID:8988374\tISS\t\tP\tenolase\tphosphopyruvate hydratase|2-phosphoglycerate dehydratase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044267",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3737\tdsbC\t\tGO:0044267\tPMID:7536035\tISS\t\tP\tthiol:disulfide interchange protein DsbC\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044267",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3823\ttgt\t\tGO:0044267\tPMID:1706703\tISS\t\tP\tqueuine tRNA-ribosyltransferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0044267",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1006\tPA1006\t\tGO:0046916\tPMID:23409003\tIMP\t\tP\tProtein PA1006\tyrkI|Protein PA1006|conserved hypothetical protein|YhhP/TusA homolog\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0046916",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2385\tpvdQ\t\tGO:0047379\tPMID:21892836\tIMP\t\tF\t3-oxo-C12-homoserine lactone acylase PvdQ\t3-oxo-C12-homoserine lactone acylase PvdQ|pvdQ|PvdQ\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0047379",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0527\tdnr\t\tGO:0051173\tPMID:20553552\tIMP\t\tP\ttranscriptional regulator Dnr\tdissimilative nitrate respiration regulator\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0051173",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5493\tpolA\t\tGO:0090305\tPMID:4890764\tISS\t\tP\tDNA polymerase I\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0090305",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4808\tselA\t\tGO:0097056\tPMID:2007584\tISS\t\tP\tL-seryl-tRNA(ser) selenium transferase\tfdhA|selenocysteine synthase, selenocysteinyl-trna(sec) synthase|cysteinyl-tRNA(ser) selenium transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0097056",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0888\taotJ\t\tGO:1902023\tPMID:9791103\tIGI\t\tP\targinine/ornithine binding protein AotJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1902023",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0889\taotQ\t\tGO:1902023\tPMID:9791103\tIGI\t\tP\targinine/ornithine transport protein AotQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1902023",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0890\taotM\t\tGO:1902023\tPMID:9791103\tIGI\t\tP\targinine/ornithine transport protein AotM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1902023",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0892\taotP\t\tGO:1902023\tPMID:9791103\tIGI\t\tP\targinine/ornithine transport protein AotP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1902023",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0888\taotJ\t\tGO:1902765\tPMID:18833300\tIMP\t\tP\targinine/ornithine binding protein AotJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1902765",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0889\taotQ\t\tGO:1902765\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1902765",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0890\taotM\t\tGO:1902765\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1902765",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0892\taotP\t\tGO:1902765\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1902765",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0888\taotJ\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\targinine/ornithine binding protein AotJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1903411",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0889\taotQ\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotQ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1903411",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0890\taotM\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotM\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1903411",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0892\taotP\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\targinine/ornithine transport protein AotP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1903411",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5153\tPA5153\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\tamino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter periplasmic binding protein\tamino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter periplasmic binding protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1903411",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5155\tPA5155\t\tGO:1903411\tPMID:18833300\tIMP\t\tP\tamino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein\tamino acid (lysine/arginine/ornithine/histidine/octopine) ABC transporter membrane protein\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1903411",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0783\tputP\t\tGO:1903809\tPMID:18833300\tIMP\t\tP\tsodium/proline symporter PutP\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:1903809",
                "taxon": "NCBITaxon:208964",
                "rule": 20
            }
        ],
        "gorule-0000027": [
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0378\tPA0378\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT51\tF\tprobable transglycosylase\tmgtA|monofunctional biosynthetic peptidoglycan transglycosylase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT51",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0705\tmigA\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\talpha-1,6-rhamnosyltransferase MigA\tmigA|alpha-1,6-rhamnosyltransferase MigA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT2",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0788\tPA0788\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:NC\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:NC",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0070930\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68074",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0070930\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68075",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0070930\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68076",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0070930\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68077",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0070930\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68079",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0070930\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68080",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0070930\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68081",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0070930\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68082",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0031647\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68074",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0031647\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68075",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0031647\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68076",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0031647\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68077",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0031647\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68079",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0031647\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68080",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0031647\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68081",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0826.2\tssrA\t\tGO:0031647\tPMID:8972778\tISA\tGB:U68074|GB:U68075|GB:U68076|GB:U68077|GB:U68079|GB:U68080|GB:U68081|GB:U68082\tP\ttmRNA\t\ttmRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: GB not found in list of database names in dbxrefs",
                "obj": "GB:U68082",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA0842\tPA0842\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1014\twapB\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\t1,2-glucosyltransferase WapB\t1,2-glucosyltransferase WapB|wapB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT2",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1091\tfgtA\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tflagellar glycosyl transferase, FgtA\tfgtA|flagellar glycosyl transferase, FgtA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT2",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1130\trhlC\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\trhamnosyltransferase 2\trhlC|rhamnosyltransferase 2\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT2",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1163\tndvB\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tNdvB\tndvB|NdvB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT2",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1385\tPA1385\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1389\tPA1389\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA1391\tPA1391\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2144\tglgP\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT36\tF\tglycogen phosphorylase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT36",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2165\tPA2165\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT5\tF\tprobable glycogen synthase\tglgA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT5",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2233\tpslC\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tPslC\tPslC|pslC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT2",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2236\tpslF\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tPslF\tPslF|pslF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2238\tpslH\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tPslH\tPslH|pslH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2239\tpslI\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tPslI\tPslI|pslI\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2283\tPA2283\t\tGO:0044183\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: WP_000984520.1 does not match any id_syntax patterns for RefSeq in dbxrefs",
                "obj": "RefSeq:WP_000984520.1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2283\tPA2283\t\tGO:0031072\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: WP_000984520.1 does not match any id_syntax patterns for RefSeq in dbxrefs",
                "obj": "RefSeq:WP_000984520.1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2283\tPA2283\t\tGO:0005886\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tC\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: WP_000984520.1 does not match any id_syntax patterns for RefSeq in dbxrefs",
                "obj": "RefSeq:WP_000984520.1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2286\tPA2286\t\tGO:0044183\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: WP_000984520.1 does not match any id_syntax patterns for RefSeq in dbxrefs",
                "obj": "RefSeq:WP_000984520.1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2286\tPA2286\t\tGO:0031072\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: WP_000984520.1 does not match any id_syntax patterns for RefSeq in dbxrefs",
                "obj": "RefSeq:WP_000984520.1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2286\tPA2286\t\tGO:0005886\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tC\thypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: WP_000984520.1 does not match any id_syntax patterns for RefSeq in dbxrefs",
                "obj": "RefSeq:WP_000984520.1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2399\tpvdD\t\tGO:0003824\tPMID:7798141\tISA\tGenBank:AAB60198.1\tF\tpyoverdine synthetase D\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: AAB60198.1 does not match any id_syntax patterns for GenBank in dbxrefs",
                "obj": "GenBank:AAB60198.1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2830\thtpX\t\tGO:0044183\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\theat shock protein HtpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: WP_000984520.1 does not match any id_syntax patterns for RefSeq in dbxrefs",
                "obj": "RefSeq:WP_000984520.1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2830\thtpX\t\tGO:0008237\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\theat shock protein HtpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: WP_000984520.1 does not match any id_syntax patterns for RefSeq in dbxrefs",
                "obj": "RefSeq:WP_000984520.1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2830\thtpX\t\tGO:0031072\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tF\theat shock protein HtpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: WP_000984520.1 does not match any id_syntax patterns for RefSeq in dbxrefs",
                "obj": "RefSeq:WP_000984520.1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA2830\thtpX\t\tGO:0005886\tPMID:24769134\tISS\tRefSeq:WP_000984520.1\tC\theat shock protein HtpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: WP_000984520.1 does not match any id_syntax patterns for RefSeq in dbxrefs",
                "obj": "RefSeq:WP_000984520.1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3059\tpelF\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tPelF\tPelF|pelF\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3147\twbpJ\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyl transferase WbpJ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3149\twbpH\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tprobable glycosyltransferase WbpH\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3478\trhlB\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT1\tF\trhamnosyltransferase chain B\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT1",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3541\talg8\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\talginate biosynthesis protein Alg8\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT2",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3553\tarnC\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tArnC\tpmrF|arnC|ArnC\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT2",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3556\tarnT\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT83\tF\tinner membrane L-Ara4N transferase ArnT\tpqaB|pmrK|arnT|inner membrane L-Ara4N transferase ArnT\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT83",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA3643\tlpxB\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT19\tF\tlipid A-disaccharide synthase\tpgsB\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT19",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4311\tPA4311\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4398\tPA4398\t\tGO:2000147\tPMID:19592586\tISO\tPseudocap:PA14_57170\tP\ttwo-component sensor\thistidine kinase protein|two-component sensor|probable two-component sensor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: Pseudocap not found in list of database names in dbxrefs",
                "obj": "Pseudocap:PA14_57170",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4398\tPA4398\t\tGO:1900232\tPMID:19592586\tISO\tPseudocap:PA14_57170\tP\ttwo-component sensor\thistidine kinase protein|two-component sensor|probable two-component sensor\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: Pseudocap not found in list of database names in dbxrefs",
                "obj": "Pseudocap:PA14_57170",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4412\tmurG\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT28\tF\tUDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT28",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4700\tmrcB\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT51\tF\tpenicillin-binding protein 1B\tpbpF|ponB|peptidoglycan synthetase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT51",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4818\tPA4818\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT83\tF\tconserved hypothetical protein\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT83",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4819\tPA4819\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tprobable glycosyl transferase\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT2",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4988\twaaA\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT30\tF\t3-deoxy-D-manno-octulosonic-acid (KDO) transferase\tkdtA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT30",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5000\twapR\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\talpha-1,3-rhamnosyltransferase WapR\twapR|alpha-1,3-rhamnosyltransferase WapR\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT2",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5004\twapH\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tWapH\twapH|WapH|probable glycosyl transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5010\twaaG\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tUDP-glucose:(heptosyl) LPS alpha 1,3-glucosyltransferase WaaG\trfaG|LPS core biosynthetic gene WaaG|Glucosyltransferase I\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5011\twaaC\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT9\tF\theptosyltransferase I\trfaC|Heptose I transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT9",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5012\twaaF\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT9\tF\theptosyltransferase II\trfaF|Heptose II transferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT9",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5045\tponA\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT51\tF\tpenicillin-binding protein 1A\tmrcA\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT51",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5077\topgH\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT2\tF\tOpgH\tOpgH|opgH|mdoH|MdoH\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT2",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5447\twbpZ\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tglycosyltransferase WbpZ\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5448\twbpY\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tglycosyltransferase WbpY\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5449\twbpX\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tglycosyltransferase WbpX\t\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5455\tPA5455\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tputative glycosyltransferase\tputative glycosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA5456\tPA5456\t\tGO:0016757\tPMID:18838391\tISS\tCAZy:GT4\tF\tputative glycosyltransferase\tputative glycosyltransferase\tprotein\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: CAZy not found in list of database names in dbxrefs",
                "obj": "CAZy:GT4",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4421.1\trnpB\t\tGO:0004526\tPMID:7509797\tISS\tEcoGene:EG30069\tF\tRNA component of RNaseP, RnpB\trnpB\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: EcoGene not found in list of database names in dbxrefs",
                "obj": "EcoGene:EG30069",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4421.1\trnpB\t\tGO:0008033\tPMID:2415431\tISS\tEcoGene:EG30069\tP\tRNA component of RNaseP, RnpB\trnpB\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: EcoGene not found in list of database names in dbxrefs",
                "obj": "EcoGene:EG30069",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            },
            {
                "level": "WARNING",
                "line": "PseudoCAP\tPA4421.1\trnpB\t\tGO:0001682\tPMID:167017\tISS\tEcoGene:EG30069\tP\tRNA component of RNaseP, RnpB\trnpB\tncRNA\ttaxon:208964\t20190311\tPseudoCAP\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: EcoGene not found in list of database names in dbxrefs",
                "obj": "EcoGene:EG30069",
                "taxon": "NCBITaxon:208964",
                "rule": 27
            }
        ]
    }
}