# Group: paint - Dataset: paint_pombase

## SUMMARY

This report generated on 2024-12-19

  * Associations: 13155
  * Lines in file (incl headers): 13194
  * Lines skipped: 33
## Header From Original Association File

> !gaf-version: 2.2  
> !Created on Thu Nov 21 14:20:14 2024.  
> !generated-by: PANTHER  
> !date-generated: 2024-11-21  
> !PANTHER version: v.19.0.  
> !GO version: 2024-11-03.  

## Contents

[gorule-0000002](#gorule-0000002)

[gorule-0000005](#gorule-0000005)

[gorule-0000006](#gorule-0000006)

[gorule-0000007](#gorule-0000007)

[gorule-0000008](#gorule-0000008)

[gorule-0000011](#gorule-0000011)

[gorule-0000013](#gorule-0000013)

[gorule-0000015](#gorule-0000015)

[gorule-0000016](#gorule-0000016)

[gorule-0000017](#gorule-0000017)

[gorule-0000018](#gorule-0000018)

[gorule-0000020](#gorule-0000020)

[gorule-0000022](#gorule-0000022)

[gorule-0000028](#gorule-0000028)

[gorule-0000029](#gorule-0000029)

[gorule-0000030](#gorule-0000030)

[gorule-0000037](#gorule-0000037)

[gorule-0000039](#gorule-0000039)

[gorule-0000042](#gorule-0000042)

[gorule-0000043](#gorule-0000043)

[gorule-0000046](#gorule-0000046)

[gorule-0000050](#gorule-0000050)

[gorule-0000055](#gorule-0000055)

[gorule-0000058](#gorule-0000058)

[gorule-0000061](#gorule-0000061)

[gorule-0000063](#gorule-0000063)

[gorule-0000064](#gorule-0000064)

[gorule-0000065](#gorule-0000065)

[other](#other)


## MESSAGES

### gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

* total: 0
### gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

* total: 0
### gorule-0000006

IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

* total: 0
### gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

* total: 0
### gorule-0000008

No annotations should be made to uninformative high level terms

* total: 0
### gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

* total: 0
### gorule-0000013

Taxon-appropriate annotation check

* total: 22
#### Messages
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPAC222.10c	byr4	involved_in	GO:0031578	GO_REF:0000033	IBA	PANTHER:PTN002172173|SGD:S000003814	P	Protein byr4	UniProtKB:Q10951|PTN002172175	protein	taxon:4896	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPAC17C9.08	pnu1	involved_in	GO:0006309	GO_REF:0000033	IBA	PANTHER:PTN000359598|MGI:MGI:1261433|WB:WBGene00000787|SGD:S000003744	P	Nuclease 1, mitochondrial	UniProtKB:Q10480|PTN000359697	protein	taxon:4896	20201205	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPBP23A10.12	frg1	is_active_in	GO:0055120	GO_REF:0000033	IBA	PANTHER:PTN000309119|WB:WBGene00014177	C	Protein frg1	UniProtKB:Q9P7X3|PTN000309173	protein	taxon:4896	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPAC27D7.08c	mtl16	enables	GO:0052907	GO_REF:0000033	IBA	PANTHER:PTN000333539|UniProtKB:P75782	F	23S rRNA/U6 snRNA (adenine-N(6))-methyltransferase Mtl16	UniProtKB:O42662|PTN000333588	protein	taxon:4896	20170228	GO_Central
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPBC336.12c	cdc10	part_of	GO:0033309	GO_REF:0000033	IBA	PANTHER:PTN000917496|SGD:S000000913|SGD:S000004172	C	Start control protein cdc10	UniProtKB:P01129|PTN000572571	protein	taxon:4896	20181004	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPAC23D3.04c	gpd2	enables	GO:0047952	GO_REF:0000033	IBA	PANTHER:PTN000919759|MGI:MGI:95679|UniProtKB:C8VTT9|SGD:S000005420|SGD:S000002180	F	Glycerol-3-phosphate dehydrogenase [NAD(+)] 2	UniProtKB:Q09845|PTN000198100	protein	taxon:4896	20241120	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPAC22F3.09c	res2	part_of	GO:0033309	GO_REF:0000033	IBA	PANTHER:PTN000917496|SGD:S000000913|SGD:S000004172	C	Cell division cycle-related protein res2_pct1	UniProtKB:P41412|PTN000917514	protein	taxon:4896	20181004	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPAPB1A10.10c	ypt71	is_active_in	GO:0045335	GO_REF:0000033	IBA	PANTHER:PTN000635769|UniProtKB:P51149|UniProtKB:Q96AH8|WB:WBGene00004271|dictyBase:DDB_G0269236|UniProtKB:Q9NP90|MGI:MGI:2442295|UniProtKB:P51151	C	Ypt_Rab-type GTPase ypt71	UniProtKB:Q9HDY0|PTN000635841	protein	taxon:4896	20201002	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPBC4F6.12	pxl1	is_active_in	GO:0030018	GO_REF:0000033	IBA	PANTHER:PTN000654055|MGI:MGI:1341092|RGD:61963|MGI:MGI:1338762	C	paxillin-like protein Pxl1	UniProtKB:O74398|PTN001198366	protein	taxon:4896	20170427	GO_Central
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPAC6F12.13c	fps1	enables	GO:0004161	GO_REF:0000033	IBA	PANTHER:PTN000162949|TAIR:locus:2130654|TAIR:locus:2160947|SGD:S000003703	F	Farnesyl pyrophosphate synthase	UniProtKB:O14230|PTN000163003	protein	taxon:4896	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPBC1685.05	htr11	involved_in	GO:0043065	GO_REF:0000033	IBA	PANTHER:PTN000533451|CGD:CAL0000176472	P	serine protease	UniProtKB:O74325|PTN000533547	protein	taxon:4896	20240606	GO_Central
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPAC6G10.03c	SPAC6G10.03c	involved_in	GO:0035965	GO_REF:0000033	IBA	PANTHER:PTN000862575|SGD:S000003342	P	lysophospholipid acyltransferase	UniProtKB:O14249|PTN000106090	protein	taxon:4896	20170228	GO_Central
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPAC9E9.15	SPAC9E9.15	involved_in	GO:0010257	GO_REF:0000033	IBA	PANTHER:PTN000995762|WB:WBGene00008225|FB:FBgn0039689|UniProtKB:Q9Y375	P	mitochondrial protein complex assembly protein	UniProtKB:O14297|PTN000995805	protein	taxon:4896	20170602	GO_Central
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPBC146.13c	myo1	is_active_in	GO:0005902	GO_REF:0000033	IBA	PANTHER:PTN001406997|UniProtKB:O00159|MGI:MGI:107732|UniProtKB:Q9UBC5|MGI:MGI:1927091|UniProtKB:P47807	C	Myosin-1	UniProtKB:Q9Y7Z8|PTN000321843	protein	taxon:4896	20240205	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPAC23G3.12c	htr12	involved_in	GO:0043065	GO_REF:0000033	IBA	PANTHER:PTN000533451|CGD:CAL0000176472	P	serine protease, involved in lipid metabolism	UniProtKB:Q9P7S1|PTN000533460	protein	taxon:4896	20240606	GO_Central
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPBC725.16	res1	part_of	GO:0033309	GO_REF:0000033	IBA	PANTHER:PTN000917496|SGD:S000000913|SGD:S000004172	C	Cell division cycle-related protein res1_sct1	UniProtKB:P33520|PTN000917513	protein	taxon:4896	20181004	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPBC215.05	gpd1	enables	GO:0047952	GO_REF:0000033	IBA	PANTHER:PTN000919759|MGI:MGI:95679|UniProtKB:C8VTT9|SGD:S000005420|SGD:S000002180	F	Glycerol-3-phosphate dehydrogenase [NAD(+)] 1	UniProtKB:P21696|PTN000198101	protein	taxon:4896	20241120	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPBC336.05c	hen1	involved_in	GO:0034587	GO_REF:0000033	IBA	PANTHER:PTN000483941|FB:FBgn0033686|WB:WBGene00015349|MGI:MGI:1913965|ZFIN:ZDB-GENE-050417-387	P	small RNA 2'-O-methyltransferase Hen1	UniProtKB:Q9UST9|PTN000483974	protein	taxon:4896	20231109	GO_Central
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPBC405.04c	ypt7	is_active_in	GO:0045335	GO_REF:0000033	IBA	PANTHER:PTN000635769|UniProtKB:P51149|UniProtKB:Q96AH8|WB:WBGene00004271|dictyBase:DDB_G0269236|UniProtKB:Q9NP90|MGI:MGI:2442295|UniProtKB:P51151	C	Ypt_Rab-type GTPase ypt7	UniProtKB:O94655|PTN000635842	protein	taxon:4896	20201002	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPBC36.06c	spo9	enables	GO:0004161	GO_REF:0000033	IBA	PANTHER:PTN000162949|TAIR:locus:2130654|TAIR:locus:2160947|SGD:S000003703	F	Geranylgeranyl pyrophosphate synthase	UniProtKB:O59703|PTN000163002	protein	taxon:4896	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPBC800.02	whi5	part_of	GO:0033309	GO_REF:0000033	IBA	PANTHER:PTN002000919|SGD:S000005609	C	Cell cycle transcriptional repressor whi5	UniProtKB:Q9HGL9|PTN002000921	protein	taxon:4896	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `PomBase	SPAC167.01	ire1	involved_in	GO:0070059	GO_REF:0000033	IBA	PANTHER:PTN000359335|MGI:MGI:1930134|MGI:MGI:1349436	P	Sensor for unfolded proteins in the ER ire1	UniProtKB:O94537|PTN000359407	protein	taxon:4896	20181005	GO_Central		
`
### gorule-0000015

Dual species taxon check

* total: 0
### gorule-0000016

With/From: IC annotations require a With/From GO ID

* total: 0
### gorule-0000017

IDA annotations must not have a With/From entry

* total: 0
### gorule-0000018

IPI annotations require a With/From entry

* total: 0
### gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

* total: 23
#### Messages
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006266) -- `PomBase	SPAC20G8.01	cdc17	involved_in	GO:0006266	GO_REF:0000033	IBA	PANTHER:PTN000048696|RGD:1309875|SGD:S000002323|UniProtKB:P49916	P	DNA ligase 1	UniProtKB:P12000|PTN001312402	protein	taxon:4896	20241121	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006266) -- `PomBase	SPBC713.06	adl1	involved_in	GO:0006266	GO_REF:0000033	IBA	PANTHER:PTN000048696|RGD:1309875|SGD:S000002323|UniProtKB:P49916	P	DNA ligase 3	UniProtKB:Q9C1W9|PTN000048757	protein	taxon:4896	20241121	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006880) -- `PomBase	SPBC1683.10c	pcl1	involved_in	GO:0006880	GO_REF:0000033	IBA	PANTHER:PTN001275041|TAIR:locus:2090305|UniProtKB:Q6MWE5|UniProtKB:Q6ERE5|TAIR:locus:2199572|TAIR:locus:2030091	P	Fe(2+)_Mn(2+) transporter pcl1	UniProtKB:Q9P6J2|PTN001274191	protein	taxon:4896	20230407	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0032508) -- `PomBase	SPAC212.11	tlh1	involved_in	GO:0032508	GO_REF:0000033	IBA	PANTHER:PTN000344873|UniProtKB:Q9I920|UniProtKB:Q8I2W7|FB:FBgn0040290|UniProtKB:O94761|UniProtKB:Q8ILG5|SGD:S000004802|UniProtKB:P54132|TAIR:locus:2197555|TAIR:locus:2180255|FB:FBgn0002906|UniProtKB:Q14191|TAIR:locus:2127998	P	ATP-dependent DNA helicase tlh1 (Fragment)	UniProtKB:P0CT33|PTN000345061	protein	taxon:4896	20230110	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0032508) -- `PomBase	SPBCPT2R1.08c	tlh2	involved_in	GO:0032508	GO_REF:0000033	IBA	PANTHER:PTN000344873|UniProtKB:Q9I920|UniProtKB:Q8I2W7|FB:FBgn0040290|UniProtKB:O94761|UniProtKB:Q8ILG5|SGD:S000004802|UniProtKB:P54132|TAIR:locus:2197555|TAIR:locus:2180255|FB:FBgn0002906|UniProtKB:Q14191|TAIR:locus:2127998	P	ATP-dependent DNA helicase tlh2	UniProtKB:Q1RKN3|PTN000345062	protein	taxon:4896	20230110	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0032508) -- `PomBase	SPBC6B1.09c	nbs1	involved_in	GO:0032508	GO_REF:0000033	IBA	PANTHER:PTN000255549|UniProtKB:O60934	P	DNA repair and telomere maintenance protein nbs1	UniProtKB:O43070|PTN001741934	protein	taxon:4896	20170228	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0032508) -- `PomBase	SPAC1556.01c	rad50	involved_in	GO:0032508	GO_REF:0000033	IBA	PANTHER:PTN000429848|UniProtKB:Q92878	P	DNA repair protein rad50	UniProtKB:Q9UTJ8|PTN001447682	protein	taxon:4896	20170228	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0032508) -- `PomBase	SPAC3G6.11	chl1	involved_in	GO:0032508	GO_REF:0000033	IBA	PANTHER:PTN000158371|UniProtKB:Q96FC9	P	ATP-dependent DNA helicase chl1	UniProtKB:O14147|PTN000158426	protein	taxon:4896	20200929	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0042989) -- `PomBase	SPCC126.06	twf1	involved_in	GO:0042989	GO_REF:0000033	IBA	PANTHER:PTN001011683|SGD:S000003312|MGI:MGI:1346078|MGI:MGI:1100520	P	Twinfilin	UniProtKB:O94399|PTN000349135	protein	taxon:4896	20170421	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0042989) -- `PomBase	SPAC4A8.15c	cdc3	involved_in	GO:0042989	GO_REF:0000033	IBA	PANTHER:PTN000176159|SGD:S000005648|UniProtKB:P35081|UniProtKB:O22655|UniProtKB:Q8I2J4|UniProtKB:Q9FR39	P	Profilin	UniProtKB:P39825|PTN000176205	protein	taxon:4896	20230110	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0044806) -- `PomBase	SPBC887.14c	pfh1	involved_in	GO:0044806	GO_REF:0000033	IBA	PANTHER:PTN001149933|SGD:S000001073|SGD:S000004526|PomBase:SPBC887.14c	P	ATP-dependent DNA helicase pfh1	UniProtKB:Q9UUA2|PTN000588807	protein	taxon:4896	20221209	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `PomBase	SPBC4.04c	mcm2	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000179907|UniProtKB:Q2R482|MGI:MGI:105380|UniProtKB:P49736	P	DNA replication licensing factor mcm2	UniProtKB:P40377|PTN000179955	protein	taxon:4896	20211215	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `PomBase	SPBC211.04c	mcm6	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000180096|MGI:MGI:1298227|UniProtKB:Q14566|SGD:S000003169	P	DNA replication licensing factor mcm6	UniProtKB:P49731|PTN000180148	protein	taxon:4896	20211215	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `PomBase	SPBC25D12.03c	mcm7	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000180038|MGI:MGI:1298398|UniProtKB:P33993|SGD:S000000406	P	DNA replication licensing factor mcm7	UniProtKB:O75001|PTN000180083	protein	taxon:4896	20211215	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `PomBase	SPCC16A11.17	mcm4	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000179968|SGD:S000006223|UniProtKB:P33991|MGI:MGI:103199	P	DNA replication licensing factor mcm4	UniProtKB:P29458|PTN000180025	protein	taxon:4896	20211215	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `PomBase	SPBC660.13c	ssb1	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000588618|SGD:S000000065	P	Replication factor A protein 1	UniProtKB:Q92372|PTN000588679	protein	taxon:4896	20210531	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `PomBase	SPAC2G11.12	rqh1	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000344874|SGD:S000004802	P	ATP-dependent DNA helicase hus2_rqh1	UniProtKB:Q09811|PTN000345063	protein	taxon:4896	20190319	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `PomBase	SPAC2F3.04c	rim1	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000033807|FB:FBgn0010438|UniProtKB:Q04837	P	Single-stranded DNA-binding protein rim1, mitochondrial	UniProtKB:O14087|PTN000816316	protein	taxon:4896	20240820	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070413) -- `PomBase	SPAC3G6.09c	tps2	involved_in	GO:0070413	GO_REF:0000033	IBA	PANTHER:PTN000846179|SGD:S000002481|PomBase:SPAC328.03	P	Trehalose-phosphatase	UniProtKB:O14145|PTN000082232	protein	taxon:4896	20170228	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070413) -- `PomBase	SPAC19G12.15c	tpp1	involved_in	GO:0070413	GO_REF:0000033	IBA	PANTHER:PTN000846179|SGD:S000002481|PomBase:SPAC328.03	P	Trehalose-phosphatase	UniProtKB:P78875|PTN000082233	protein	taxon:4896	20170228	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070413) -- `PomBase	SPAC22F8.05	SPAC22F8.05	involved_in	GO:0070413	GO_REF:0000033	IBA	PANTHER:PTN000846179|SGD:S000002481|PomBase:SPAC328.03	P	alpha,alpha-trehalose-phosphate synthase	UniProtKB:Q9UUI7|PTN000082221	protein	taxon:4896	20170228	GO_Central
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070413) -- `PomBase	SPACUNK4.16c	tps3	involved_in	GO:0070413	GO_REF:0000033	IBA	PANTHER:PTN000846179|SGD:S000002481|PomBase:SPAC328.03	P	Putative alpha,alpha-trehalose-phosphate synthase [UDP-forming] 106 kDa subunit	UniProtKB:O14081|PTN001324990	protein	taxon:4896	20170228	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070413) -- `PomBase	SPAC328.03	tps1	involved_in	GO:0070413	GO_REF:0000033	IBA	PANTHER:PTN000846179|SGD:S000002481|PomBase:SPAC328.03	P	Alpha,alpha-trehalose-phosphate synthase [UDP-forming]	UniProtKB:P40387|PTN000082198	protein	taxon:4896	20170228	GO_Central		
`
### gorule-0000022

Check for, and filter, annotations made to retracted publications

* total: 0
### gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

* total: 0
### gorule-0000029

IEAs should be less than one year old.

* total: 0
### gorule-0000030

Obsolete GO_REFs are not allowed

* total: 0
### gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

* total: 0
### gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

* total: 0
### gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

* total: 0
### gorule-0000043

Check for valid combination of evidence code and GO_REF

* total: 0
### gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

* total: 1
#### Messages
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `PomBase	SPBC4B4.06	vps25	enables	GO:0042803	GO_REF:0000033	IBA	PANTHER:PTN000322234|UniProtKB:Q9BRG1	F	Vacuolar protein-sorting-associated protein 25	UniProtKB:O74967|PTN000322278	protein	taxon:4896	20170228	GO_Central		
`
### gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

* total: 0
### gorule-0000055

References should have only one ID per ID space

* total: 0
### gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

* total: 0
### gorule-0000061

Allowed gene product to term relations (gp2term)

* total: 0
### gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

* total: 0
### gorule-0000064

TreeGrafter IEAs should be filtered for GO reference species

* total: 0
### gorule-0000065

Annotations to term that are candidates for obsoletion should be removed

* total: 6
#### Messages
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPBC32H8.08c	omh5	involved_in	GO:0097502	GO_REF:0000033	IBA	PANTHER:PTN001579360|PomBase:SPBC19C7.12c	P	O-glycoside alpha-1,2-mannosyltransferase homolog 5	UniProtKB:Q96WW1|PTN001579364	protein	taxon:4896	20241120	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPBC1773.08c	omh4	involved_in	GO:0097502	GO_REF:0000033	IBA	PANTHER:PTN001579360|PomBase:SPBC19C7.12c	P	O-glycoside alpha-1,2-mannosyltransferase homolog 4	UniProtKB:O94565|PTN001579365	protein	taxon:4896	20241120	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPAC959.04c	omh6	involved_in	GO:0097502	GO_REF:0000033	IBA	PANTHER:PTN001579360|PomBase:SPBC19C7.12c	P	O-glycoside alpha-1,2-mannosyltransferase homolog 6	UniProtKB:Q9P4X2|PTN001258804	protein	taxon:4896	20241120	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPBC19C7.12c	omh1	involved_in	GO:0097502	GO_REF:0000033	IBA	PANTHER:PTN001579360|PomBase:SPBC19C7.12c	P	O-glycoside alpha-1,2-mannosyltransferase omh1	UniProtKB:O60160|PTN000779439	protein	taxon:4896	20241120	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPBC16H5.09c	omh2	involved_in	GO:0097502	GO_REF:0000033	IBA	PANTHER:PTN001579360|PomBase:SPBC19C7.12c	P	O-glycoside alpha-1,2-mannosyltransferase homolog 2	UniProtKB:O42944|PTN000779437	protein	taxon:4896	20241120	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed -- `PomBase	SPCC777.07	omh3	involved_in	GO:0097502	GO_REF:0000033	IBA	PANTHER:PTN001579360|PomBase:SPBC19C7.12c	P	O-glycoside alpha-1,2-mannosyltransferase homolog 3	UniProtKB:O74546|PTN000779438	protein	taxon:4896	20241120	GO_Central		
`
### other

* total: 0