# Group: paint - Dataset: paint_wb

## SUMMARY

This report generated on 2024-12-19

  * Associations: 29924
  * Lines in file (incl headers): 29959
  * Lines skipped: 29
## Header From Original Association File

> !gaf-version: 2.2  
> !Created on Thu Nov 21 14:20:16 2024.  
> !generated-by: PANTHER  
> !date-generated: 2024-11-21  
> !PANTHER version: v.19.0.  
> !GO version: 2024-11-03.  

## Contents

[gorule-0000002](#gorule-0000002)

[gorule-0000005](#gorule-0000005)

[gorule-0000006](#gorule-0000006)

[gorule-0000007](#gorule-0000007)

[gorule-0000008](#gorule-0000008)

[gorule-0000011](#gorule-0000011)

[gorule-0000013](#gorule-0000013)

[gorule-0000015](#gorule-0000015)

[gorule-0000016](#gorule-0000016)

[gorule-0000017](#gorule-0000017)

[gorule-0000018](#gorule-0000018)

[gorule-0000020](#gorule-0000020)

[gorule-0000022](#gorule-0000022)

[gorule-0000027](#gorule-0000027)

[gorule-0000028](#gorule-0000028)

[gorule-0000029](#gorule-0000029)

[gorule-0000030](#gorule-0000030)

[gorule-0000037](#gorule-0000037)

[gorule-0000039](#gorule-0000039)

[gorule-0000042](#gorule-0000042)

[gorule-0000043](#gorule-0000043)

[gorule-0000046](#gorule-0000046)

[gorule-0000050](#gorule-0000050)

[gorule-0000055](#gorule-0000055)

[gorule-0000058](#gorule-0000058)

[gorule-0000061](#gorule-0000061)

[gorule-0000063](#gorule-0000063)

[gorule-0000064](#gorule-0000064)

[gorule-0000065](#gorule-0000065)

[other](#other)


## MESSAGES

### gorule-0000002

No 'NOT' annotations to binding ; GO:0005488 or 'protein binding ; GO:0005515'

* total: 0
### gorule-0000005

IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to to 'protein binding ; GO:0005515 or GO:0005488 binding''

* total: 0
### gorule-0000006

IEP and HEP usage is restricted to terms from the Biological Process ontology, except when assigned by GOC

* total: 0
### gorule-0000007

IPI should not be used with GO:0003824 catalytic activity or descendents

* total: 0
### gorule-0000008

No annotations should be made to uninformative high level terms

* total: 0
### gorule-0000011

ND evidence code should be to root nodes only, and no terms other than root nodes can have the evidence code ND

* total: 0
### gorule-0000013

Taxon-appropriate annotation check

* total: 19
#### Messages
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00000961	dgn-1	involved_in	GO:0016203	GO_REF:0000033	IBA	PANTHER:PTN002727160|ZFIN:ZDB-GENE-021223-1|FB:FBgn0034072	P	Dystroglycan 1	UniProtKB:Q22629|PTN000490333	protein	taxon:6239	20210530	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00009288	CELE_F31C3.6	involved_in	GO:0035317	GO_REF:0000033	IBA	PANTHER:PTN002217652|FB:FBgn0003382	P	Protein kinase domain-containing protein	UniProtKB:O62194|PTN002217663	protein	taxon:6239	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00011083	glo-1	is_active_in	GO:0042470	GO_REF:0000033	IBA	PANTHER:PTN000636041|UniProtKB:Q13637|RGD:628752|MGI:MGI:1915094|MGI:MGI:1919683|UniProtKB:P57729	C	Ras-related protein Rab	UniProtKB:G5EBF0|PTN000636218	protein	taxon:6239	20241120	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00007710	rsa-1	involved_in	GO:0001782	GO_REF:0000033	IBA	PANTHER:PTN000949378|MGI:MGI:1930009	P	Serine_threonine-protein phosphatase 2A regulatory subunit rsa-1	UniProtKB:O02217|PTN000551236	protein	taxon:6239	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00011802	CELE_T16G1.9	is_active_in	GO:0009707	GO_REF:0000033	IBA	PANTHER:PTN002794166|TAIR:locus:2117607	C	EIF3k	UniProtKB:Q9U367|PTN000652581	protein	taxon:6239	20240206	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00018943	dgn-2	involved_in	GO:0016203	GO_REF:0000033	IBA	PANTHER:PTN002727160|ZFIN:ZDB-GENE-021223-1|FB:FBgn0034072	P	Peptidase S72 domain-containing protein	UniProtKB:O61756|PTN000490326	protein	taxon:6239	20210530	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00010664	dbn-1	involved_in	GO:0061003	GO_REF:0000033	IBA	PANTHER:PTN000850962|RGD:70885|MGI:MGI:1931838	P	DreBriN 1_DreBriN-like (Where Drebrin is from Developmentally REgulated BRaIN protein) family homolog	UniProtKB:Q9XUT0|PTN000089321	protein	taxon:6239	20190524	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00010778	gpdh-2	enables	GO:0047952	GO_REF:0000033	IBA	PANTHER:PTN000919759|MGI:MGI:95679|UniProtKB:C8VTT9|SGD:S000005420|SGD:S000002180	F	Probable glycerol-3-phosphate dehydrogenase 2	UniProtKB:P34517|PTN000198079	protein	taxon:6239	20241120	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00007710	rsa-1	involved_in	GO:0043029	GO_REF:0000033	IBA	PANTHER:PTN000949378|MGI:MGI:1930009	P	Serine_threonine-protein phosphatase 2A regulatory subunit rsa-1	UniProtKB:O02217|PTN000551236	protein	taxon:6239	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00006434	prdx-2	involved_in	GO:0045321	GO_REF:0000033	IBA	PANTHER:PTN000743557|UniProtKB:Q06830|MGI:MGI:109486|ZFIN:ZDB-GENE-050320-35	P	Peroxiredoxin prdx-2	UniProtKB:A0A0K3AUJ9|PTN000073967	protein	taxon:6239	20181121	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00020574	CELE_T19D7.6	involved_in	GO:0030318	GO_REF:0000033	IBA	PANTHER:PTN000058168|ZFIN:ZDB-GENE-050522-285|UniProtKB:Q9H2I8	P	LRRcap domain-containing protein	UniProtKB:Q22587|PTN001632280	protein	taxon:6239	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00020957	CELE_W02H5.2	part_of	GO:0140007	GO_REF:0000033	IBA	PANTHER:PTN000396361|UniProtKB:Q9Y664	C	SOCS box domain-containing protein	UniProtKB:A0A1I6CMB1|PTN002310501	protein	taxon:6239	20190719	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00003111	mab-20	involved_in	GO:0001755	GO_REF:0000033	IBA	PANTHER:PTN000867340|ZFIN:ZDB-GENE-030131-7864|ZFIN:ZDB-GENE-050513-3|MGI:MGI:107557|ZFIN:ZDB-GENE-990715-2|MGI:MGI:107558|ZFIN:ZDB-GENE-050513-1|ZFIN:ZDB-GENE-050513-4|MGI:MGI:1096347	P	Semaphorin-2A	UniProtKB:Q95XP4|PTN000112892	protein	taxon:6239	20220922	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00004889	smp-1	involved_in	GO:0001755	GO_REF:0000033	IBA	PANTHER:PTN000867340|ZFIN:ZDB-GENE-030131-7864|ZFIN:ZDB-GENE-050513-3|MGI:MGI:107557|ZFIN:ZDB-GENE-990715-2|MGI:MGI:107558|ZFIN:ZDB-GENE-050513-1|ZFIN:ZDB-GENE-050513-4|MGI:MGI:1096347	P	Semaphorin-1A	UniProtKB:Q17330|PTN000112897	protein	taxon:6239	20220922	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00003916	par-1	enables	GO:0050321	GO_REF:0000033	IBA	PANTHER:PTN000680111|UniProtKB:P27448|FB:FBgn0260934|UniProtKB:Q7KZI7|RGD:708483|UniProtKB:Q96L34	F	Serine_threonine-protein kinase par-1	UniProtKB:Q9TW45|PTN000680250	protein	taxon:6239	20200809	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00004890	smp-2	involved_in	GO:0001755	GO_REF:0000033	IBA	PANTHER:PTN000867340|ZFIN:ZDB-GENE-030131-7864|ZFIN:ZDB-GENE-050513-3|MGI:MGI:107557|ZFIN:ZDB-GENE-990715-2|MGI:MGI:107558|ZFIN:ZDB-GENE-050513-1|ZFIN:ZDB-GENE-050513-4|MGI:MGI:1096347	P	Sema domain-containing protein	UniProtKB:Q9TYS4|PTN000112937	protein	taxon:6239	20220922	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00014228	mett-10	enables	GO:0052907	GO_REF:0000033	IBA	PANTHER:PTN000333539|UniProtKB:P75782	F	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase	UniProtKB:Q09357|PTN000333577	protein	taxon:6239	20170228	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00009824	gpdh-1	enables	GO:0047952	GO_REF:0000033	IBA	PANTHER:PTN000919759|MGI:MGI:95679|UniProtKB:C8VTT9|SGD:S000005420|SGD:S000002180	F	Glycerol-3-phosphate dehydrogenase [NAD(+)]	UniProtKB:Q9XTS4|PTN000198078	protein	taxon:6239	20241120	GO_Central		
`
* ERROR - Violates GO Rule: GORULE:0000013: Taxon-appropriate annotation check -- `WB	WBGene00004719	sad-1	enables	GO:0050321	GO_REF:0000033	IBA	PANTHER:PTN000679673|MGI:MGI:2685946|UniProtKB:Q8TDC3|MGI:MGI:1923020|UniProtKB:Q8IWQ3	F	Serine_threonine kinase SAD-1	UniProtKB:Q19469|PTN000679719	protein	taxon:6239	20230603	GO_Central		
`
### gorule-0000015

Dual species taxon check

* total: 0
### gorule-0000016

With/From: IC annotations require a With/From GO ID

* total: 0
### gorule-0000017

IDA annotations must not have a With/From entry

* total: 0
### gorule-0000018

IPI annotations require a With/From entry

* total: 0
### gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

* total: 28
#### Messages
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006266) -- `WB	WBGene00010626	CELE_K07C5.3	involved_in	GO:0006266	GO_REF:0000033	IBA	PANTHER:PTN000048696|RGD:1309875|SGD:S000002323|UniProtKB:P49916	P	PARP-type domain-containing protein	UniProtKB:Q21275|PTN000048827	protein	taxon:6239	20241121	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0006266) -- `WB	WBGene00002985	lig-1	involved_in	GO:0006266	GO_REF:0000033	IBA	PANTHER:PTN000048696|RGD:1309875|SGD:S000002323|UniProtKB:P49916	P	DNA ligase 1	UniProtKB:Q27474|PTN000048828	protein	taxon:6239	20241121	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0032508) -- `WB	WBGene00010839	chl-1	involved_in	GO:0032508	GO_REF:0000033	IBA	PANTHER:PTN000158371|UniProtKB:Q96FC9	P	ATP-dependent DNA helicase chl-1	UniProtKB:Q21489|PTN000158413	protein	taxon:6239	20200929	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0032508) -- `WB	WBGene00009124	rtel-1	involved_in	GO:0032508	GO_REF:0000033	IBA	PANTHER:PTN000158195|MGI:MGI:2139369	P	Regulator of telomere elongation helicase 1 homolog	UniProtKB:Q93575|PTN000158223	protein	taxon:6239	20200929	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0032508) -- `WB	WBGene00004296	rad-50	involved_in	GO:0032508	GO_REF:0000033	IBA	PANTHER:PTN000429848|UniProtKB:Q92878	P	DNA repair protein rad-50	UniProtKB:O44199|PTN000429894	protein	taxon:6239	20170228	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0042989) -- `WB	WBGene00003989	pfn-1	involved_in	GO:0042989	GO_REF:0000033	IBA	PANTHER:PTN000176159|SGD:S000005648|UniProtKB:P35081|UniProtKB:O22655|UniProtKB:Q8I2J4|UniProtKB:Q9FR39	P	Profilin-1	UniProtKB:Q9XW16|PTN000176188	protein	taxon:6239	20230110	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0042989) -- `WB	WBGene00018187	twf-2	involved_in	GO:0042989	GO_REF:0000033	IBA	PANTHER:PTN001011683|SGD:S000003312|MGI:MGI:1346078|MGI:MGI:1100520	P	ADF-H domain-containing protein	UniProtKB:Q20173|PTN000349120	protein	taxon:6239	20170421	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0042989) -- `WB	WBGene00003990	pfn-2	involved_in	GO:0042989	GO_REF:0000033	IBA	PANTHER:PTN000176159|SGD:S000005648|UniProtKB:P35081|UniProtKB:O22655|UniProtKB:Q8I2J4|UniProtKB:Q9FR39	P	Profilin-2	UniProtKB:Q20025|PTN000176189	protein	taxon:6239	20230110	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0042989) -- `WB	WBGene00003991	pfn-3	involved_in	GO:0042989	GO_REF:0000033	IBA	PANTHER:PTN000176159|SGD:S000005648|UniProtKB:P35081|UniProtKB:O22655|UniProtKB:Q8I2J4|UniProtKB:Q9FR39	P	Profilin-3	UniProtKB:Q21193|PTN000176192	protein	taxon:6239	20230110	GO_Central		
`
* ERROR - Obsolete class with no replacement: Violates GORULE:0000020 (GO:0044806) -- `WB	WBGene00006944	wrn-1	involved_in	GO:0044806	GO_REF:0000033	IBA	PANTHER:PTN002492232|UniProtKB:Q14191|MGI:MGI:109635	P	ATP-dependent helicase wrn-1	UniProtKB:Q19546|PTN000344956	protein	taxon:6239	20190113	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00003156	mcm-4	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000179968|SGD:S000006223|UniProtKB:P33991|MGI:MGI:103199	P	DNA replication licensing factor mcm-4	UniProtKB:Q95XQ8|PTN000180012	protein	taxon:6239	20211215	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00003159	mcm-7	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000180038|MGI:MGI:1298398|UniProtKB:P33993|SGD:S000000406	P	DNA replication licensing factor MCM7	UniProtKB:O16297|PTN000180069	protein	taxon:6239	20211215	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00019859	CELE_R03H10.7	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000588618|SGD:S000000065	P	Replication protein A OB domain-containing protein	UniProtKB:Q9GYL8|PTN008595980	protein	taxon:6239	20210531	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00003154	mcm-2	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000179907|UniProtKB:Q2R482|MGI:MGI:105380|UniProtKB:P49736	P	DNA replication licensing factor MCM2	UniProtKB:Q9XXI9|PTN000179943	protein	taxon:6239	20211215	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00006944	wrn-1	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000344874|SGD:S000004802	P	ATP-dependent helicase wrn-1	UniProtKB:Q19546|PTN000344956	protein	taxon:6239	20190319	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00004322	rcq-5	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000344874|SGD:S000004802	P	ATP-dependent DNA helicase	UniProtKB:Q19046|PTN000345000	protein	taxon:6239	20190319	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00017546	rpa-1	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000588618|SGD:S000000065	P	Probable replication factor A 73 kDa subunit	UniProtKB:Q19537|PTN000588664	protein	taxon:6239	20210531	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00019858	CELE_R03H10.6	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000588618|SGD:S000000065	P	Replication protein A OB domain-containing protein	UniProtKB:Q9GYL9|PTN008595981	protein	taxon:6239	20210531	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00001865	him-6	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000344874|SGD:S000004802	P	RecQ-like DNA helicase blm-1	UniProtKB:O18017|PTN000345041	protein	taxon:6239	20190319	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00003158	mcm-6	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000180096|MGI:MGI:1298227|UniProtKB:Q14566|SGD:S000003169	P	DNA replication licensing factor mcm-6	UniProtKB:P34647|PTN000180135	protein	taxon:6239	20211215	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00019800	mtss-1	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000033807|FB:FBgn0010438|UniProtKB:Q04837	P	Single-stranded DNA-binding protein, mitochondrial	UniProtKB:P34496|PTN000033838	protein	taxon:6239	20240820	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0006268) -- `WB	WBGene00019334	K02F3.12	involved_in	GO:0006268	GO_REF:0000033	IBA	PANTHER:PTN000344874|SGD:S000004802	P	Putative ATP-dependent DNA helicase Q1	UniProtKB:Q9TXJ8|PTN000344917	protein	taxon:6239	20190319	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0030374) -- `WB	WBGene00011259	miz-1	enables	GO:0030374	GO_REF:0000033	IBA	PANTHER:PTN000081664|UniProtKB:Q8NF64	F	Zmiz1 N-terminal tetratricopeptide repeat domain-containing protein	UniProtKB:Q21970|PTN000081712	protein	taxon:6239	20190426	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0033207) -- `WB	WBGene00012206	CELE_W02B12.11	enables	GO:0033207	GO_REF:0000033	IBA	PANTHER:PTN002712064|FB:FBgn0039625|FB:FBgn0027538|WB:WBGene00000269	F	Beta-1,4-N-acetylgalactosaminyltransferase	UniProtKB:G5EGS9|PTN000447033	protein	taxon:6239	20221008	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0033207) -- `WB	WBGene00000269	bre-4	enables	GO:0033207	GO_REF:0000033	IBA	PANTHER:PTN002712064|FB:FBgn0039625|FB:FBgn0027538|WB:WBGene00000269	F	Beta-1,4-N-acetylgalactosaminyltransferase bre-4	UniProtKB:Q9GUM2|PTN000447036	protein	taxon:6239	20221008	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0046537) -- `WB	WBGene00019001	ipgm-1	enables	GO:0046537	GO_REF:0000033	IBA	PANTHER:PTN000781248|TAIR:locus:2024357|TAIR:locus:2077793|WB:WBGene00019001|UniProtKB:P37689|UniProtKB:P39773	F	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	UniProtKB:G5EFZ1|PTN000781253	protein	taxon:6239	20210905	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070413) -- `WB	WBGene00006602	tps-1	involved_in	GO:0070413	GO_REF:0000033	IBA	PANTHER:PTN000846179|SGD:S000002481|PomBase:SPAC328.03	P	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1	UniProtKB:Q7YZT6|PTN000082172	protein	taxon:6239	20170228	GO_Central		
`
* WARNING - Obsolete class: Violates GORULE:0000020, but was repaired (GO:0070413) -- `WB	WBGene00006603	tps-2	involved_in	GO:0070413	GO_REF:0000033	IBA	PANTHER:PTN000846179|SGD:S000002481|PomBase:SPAC328.03	P	Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2	UniProtKB:O45380|PTN000082171	protein	taxon:6239	20170228	GO_Central		
`
### gorule-0000022

Check for, and filter, annotations made to retracted publications

* total: 0
### gorule-0000027

Each identifier in GAF is valid

* total: 3
#### Messages
* WARNING - Invalid identifier: GORULE:0000027: 15003269 does not match any id_syntax patterns for RGD in dbxrefs (RGD:15003269) -- `WB	WBGene00022059	CELE_Y67D8A.2	part_of	GO:0005964	GO_REF:0000033	IBA	PANTHER:PTN000844181|RGD:620186|RGD:15003269|RGD:621522	C	Phosphorylase b kinase regulatory subunit	UniProtKB:H2L0I6|PTN000844192	protein	taxon:6239	20240918	GO_Central		
`
* WARNING - Invalid identifier: GORULE:0000027: 15003269 does not match any id_syntax patterns for RGD in dbxrefs (RGD:15003269) -- `WB	WBGene00015754	C14B9.8	part_of	GO:0005964	GO_REF:0000033	IBA	PANTHER:PTN000844181|RGD:620186|RGD:15003269|RGD:621522	C	Probable phosphorylase b kinase regulatory subunit alpha	UniProtKB:P34335|PTN000079042	protein	taxon:6239	20240918	GO_Central		
`
* WARNING - Invalid identifier: GORULE:0000027: 41131609 does not match any id_syntax patterns for RGD in dbxrefs (RGD:41131609) -- `WB	WBGene00008220	C50B6.7	enables	GO:0004556	GO_REF:0000033	IBA	PANTHER:PTN008108699|RGD:1593187|FB:FBgn0020506|UniProtKB:P04746|UniProtKB:P0DUB6|UniProtKB:P0DTE7|FB:FBgn0000079|UniProtKB:P0DTE8|RGD:41131609	F	Alpha-amylase	UniProtKB:P91982|PTN000039944	protein	taxon:6239	20240920	GO_Central		
`
### gorule-0000028

GO aspect should match the term's namespace; otherwise it is repaired to the appropriate aspect

* total: 0
### gorule-0000029

IEAs should be less than one year old.

* total: 0
### gorule-0000030

Obsolete GO_REFs are not allowed

* total: 0
### gorule-0000037

IBA annotations should ONLY be assigned_by GO_Central and have GO_REF:0000033 as a reference

* total: 0
### gorule-0000039

Protein complexes can not be annotated to GO:0032991 (protein-containing complex) or its descendants

* total: 0
### gorule-0000042

Qualifier: IKR evidence code requires a NOT qualifier

* total: 0
### gorule-0000043

Check for valid combination of evidence code and GO_REF

* total: 0
### gorule-0000046

The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.

* total: 4
#### Messages
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `WB	WBGene00011146	pde-2	enables	GO:0042803	GO_REF:0000033	IBA	PANTHER:PTN000886790|UniProtKB:O00408|MGI:MGI:2446107	F	Probable 3',5'-cyclic phosphodiesterase pde-2	UniProtKB:P30645|PTN000142448	protein	taxon:6239	20180916	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `WB	WBGene00021868	atln-1	involved_in	GO:0051260	GO_REF:0000033	IBA	PANTHER:PTN000844237|FB:FBgn0039213|UniProtKB:Q8WXF7|UniProtKB:Q6DD88|UniProtKB:Q8NHH9	P	GB1_RHD3-type G domain-containing protein	UniProtKB:Q9BMU4|PTN000079220	protein	taxon:6239	20190207	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `WB	WBGene00012763	atln-2	involved_in	GO:0051260	GO_REF:0000033	IBA	PANTHER:PTN000844237|FB:FBgn0039213|UniProtKB:Q8WXF7|UniProtKB:Q6DD88|UniProtKB:Q8NHH9	P	GB1_RHD3-type G domain-containing protein	UniProtKB:O62433|PTN000079217	protein	taxon:6239	20190207	GO_Central		
`
* WARNING - Violates GO Rule: GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms -- `WB	WBGene00012193	vps-25	enables	GO:0042803	GO_REF:0000033	IBA	PANTHER:PTN000322234|UniProtKB:Q9BRG1	F	Vacuolar protein-sorting-associated protein 25	UniProtKB:Q9U354|PTN000322267	protein	taxon:6239	20170228	GO_Central		
`
### gorule-0000050

Annotations to ISS, ISA and ISO should not be self-referential

* total: 0
### gorule-0000055

References should have only one ID per ID space

* total: 0
### gorule-0000058

Object extensions should conform to the extensions-patterns.yaml file in metadata

* total: 0
### gorule-0000061

Allowed gene product to term relations (gp2term)

* total: 0
### gorule-0000063

Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)

* total: 0
### gorule-0000064

TreeGrafter IEAs should be filtered for GO reference species

* total: 0
### gorule-0000065

Annotations to term that are candidates for obsoletion should be removed

* total: 0
### other

* total: 0