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"level": "WARNING", "line": "UniProtKB\tJ3QRK1\tKCTD1\tinvolved_in\tGO:0051260\tGO_REF:0000002\tIEA\tInterPro:IPR003131\tP\tBTB domain-containing protein\tKCTD1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:J3QRK1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tJ3QS43\tTNFAIP1\tinvolved_in\tGO:0051260\tGO_REF:0000002\tIEA\tInterPro:IPR003131\tP\tBTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2\tTNFAIP1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:J3QS43\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": 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"type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tP10997\tIAPP\tinvolved_in\tGO:0051260\tPMID:22944668\tIDA\t\tP\tIslet amyloid polypeptide\tIAPP\tprotein\ttaxon:9606\t20170425\tUniProt\t\tUniProtKB:P10997-PRO_0000004106\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tP14618\tPKM\tenables\tGO:0042803\tPMID:22306293\tIDA\t\tF\tPyruvate kinase PKM\tPKM|OIP3|PK2|PK3|PKM2\tprotein\ttaxon:9606\t20220301\tUniProt\t\tUniProtKB:P14618-1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF 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"UniProtKB\tP57764\tGSDMD\tinvolved_in\tGO:0051260\tPMID:33883744\tIDA\t\tP\tGasdermin-D\tGSDMD|DFNA5L|GSDMDC1|FKSG10\tprotein\ttaxon:9606\t20211222\tUniProt\t\tUniProtKB:P57764-PRO_0000437526\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ01196\tRUNX1\tenables\tGO:0042803\tPMID:10856244\tIDA\t\tF\tRunt-related transcription factor 1\tRUNX1|AML1|CBFA2\tprotein\ttaxon:9606\t20060404\tUniProt\t\tUniProtKB:Q01196-1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ03001\tDST\tenables\tGO:0042803\tPMID:19932097\tIDA\t\tF\tDystonin\tDST|BP230|BP240|BPAG1|DMH|DT|KIAA0728\tprotein\ttaxon:9606\t20110429\tUniProt\t\tUniProtKB:Q03001-1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ03112\tMECOM\tNOT|enables\tGO:0042803\tPMID:15897867\tIDA\t\tF\tHistone-lysine N-methyltransferase MECOM\tMECOM|EVI1|MDS1|PRDM3\tprotein\ttaxon:9606\t20100112\tUniProt\t\tUniProtKB:Q03112-2\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ03112\tMECOM\tenables\tGO:0042803\tPMID:15897867\tIDA\t\tF\tHistone-lysine N-methyltransferase MECOM\tMECOM|EVI1|MDS1|PRDM3\tprotein\ttaxon:9606\t20100112\tUniProt\t\tUniProtKB:Q03112-1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ08495\tDMTN\tenables\tGO:0043621\tPMID:23355471\tIDA\t\tF\tDematin\tDMTN|DMT|EPB49\tprotein\ttaxon:9606\t20130524\tUniProt\t\tUniProtKB:Q08495-2\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ16656\tNRF1\tenables\tGO:0042803\tGO_REF:0000024\tISS\tUniProtKB:Q90979\tF\tNuclear respiratory factor 1\tNRF1\tprotein\ttaxon:9606\t20150422\tAgBase\t\tUniProtKB:Q16656-4\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ5JXL4\tKCNG1\tinvolved_in\tGO:0051260\tGO_REF:0000002\tIEA\tInterPro:IPR003131\tP\tPotassium channel tetramerisation-type BTB domain-containing protein\tKCNG1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:Q5JXL4\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": 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"UniProtKB\tQ69383\tERVK-6\tinvolved_in\tGO:0051260\tPMID:11000203\tIMP\t\tP\tEndogenous retrovirus group K member 6 Rec protein\tERVK-6|ERVK6\tprotein\ttaxon:9606\t20170713\tUniProt\t\tUniProtKB:Q69383\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ70YC4\tZNF365\tenables\tGO:0042803\tPMID:16617106\tIDA\t\tF\tTalanin\tZNF365|KIAA0844\tprotein\ttaxon:9606\t20151028\tMGI\t\tUniProtKB:Q70YC4\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ8NF99\tZNF397\tenables\tGO:0042803\tPMID:12801647\tIPI\tUniProtKB:Q8NF99-1\tF\tZinc finger protein 397\tZNF397|ZNF47|ZSCAN15\tprotein\ttaxon:9606\t20170627\tUniProt\thas_input(InterPro:IPR003309)\tUniProtKB:Q8NF99-1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ8NF99\tZNF397\tenables\tGO:0042803\tPMID:12801647\tIPI\tUniProtKB:Q8NF99-3\tF\tZinc finger protein 397\tZNF397|ZNF47|ZSCAN15\tprotein\ttaxon:9606\t20170627\tUniProt\t\tUniProtKB:Q8NF99-3\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ92692\tNECTIN2\tenables\tGO:0042803\tPMID:9845526\tIPI\tUniProtKB:Q92692-1\tF\tNectin-2\tNECTIN2|HVEB|PRR2|PVRL2\tprotein\ttaxon:9606\t20081128\tBHF-UCL\t\tUniProtKB:Q92692-1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ92692\tNECTIN2\tenables\tGO:0042803\tPMID:9845526\tIPI\tUniProtKB:Q92692-2\tF\tNectin-2\tNECTIN2|HVEB|PRR2|PVRL2\tprotein\ttaxon:9606\t20081128\tBHF-UCL\t\tUniProtKB:Q92692-2\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ96N95\tZNF396\tenables\tGO:0042803\tPMID:12801647\tIPI\tUniProtKB:Q96N95-1\tF\tZinc finger protein 396\tZNF396|ZSCAN14\tprotein\ttaxon:9606\t20170627\tUniProt\t\tUniProtKB:Q96N95-1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ96N95\tZNF396\tenables\tGO:0042803\tPMID:12801647\tIPI\tUniProtKB:Q96N95-2\tF\tZinc finger protein 396\tZNF396|ZSCAN14\tprotein\ttaxon:9606\t20170627\tUniProt\t\tUniProtKB:Q96N95-2\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": 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when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ9H165\tBCL11A\tenables\tGO:0042803\tPMID:16704730\tIPI\tUniProtKB:Q9H165-1\tF\tB-cell lymphoma/leukemia 11A\tBCL11A|CTIP1|EVI9|KIAA1809|ZNF856\tprotein\ttaxon:9606\t20210616\tUniProt\t\tUniProtKB:Q9H165-1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ9NQC3\tRTN4\tenables\tGO:0042803\tPMID:27786289\tIDA\t\tF\tReticulon-4\tRTN4|KIAA0886|NOGO|My043|SP1507\tprotein\ttaxon:9606\t20181206\tUniProt\t\tUniProtKB:Q9NQC3-2\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ9UER7\tDAXX\tenables\tGO:0042803\tPMID:10698492\tIDA\t\tF\tDeath domain-associated protein 6\tDAXX|BING2|DAP6\tprotein\ttaxon:9606\t20060329\tUniProt\t\tUniProtKB:Q9UER7-1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ9UKU0\tACSL6\tenables\tGO:0042803\tPMID:20429931\tIDA\t\tF\tLong-chain-fatty-acid--CoA ligase 6\tACSL6|ACS2|FACL6|KIAA0837|LACS5\tprotein\ttaxon:9606\t20120702\tUniProt\t\tUniProtKB:Q9UKU0-1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", 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"UniProtKB\tQ9Y2G2\tCARD8\tenables\tGO:0043621\tPMID:33420028\tIDA\t\tF\tCaspase recruitment domain-containing protein 8\tCARD8|DACAR|KIAA0955|NDPP1\tprotein\ttaxon:9606\t20210503\tUniProt\t\tUniProtKB:Q9Y2G2-PRO_0000452848\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ9Y2G2\tCARD8\tenables\tGO:0043621\tPMID:33420033\tIDA\t\tF\tCaspase recruitment domain-containing protein 8\tCARD8|DACAR|KIAA0955|NDPP1\tprotein\ttaxon:9606\t20210503\tUniProt\t\tUniProtKB:Q9Y2G2-PRO_0000452848\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ9Y2G2\tCARD8\tenables\tGO:0043621\tPMID:34019797\tIDA\t\tF\tCaspase recruitment domain-containing protein 8\tCARD8|DACAR|KIAA0955|NDPP1\tprotein\ttaxon:9606\t20211222\tUniProt\t\tUniProtKB:Q9Y2G2-PRO_0000452848\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ9Y2G2\tCARD8\tinvolved_in\tGO:0051260\tPMID:33420028\tIDA\t\tP\tCaspase recruitment domain-containing protein 8\tCARD8|DACAR|KIAA0955|NDPP1\tprotein\ttaxon:9606\t20210503\tUniProt\t\tUniProtKB:Q9Y2G2-PRO_0000452848\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ9Y2G2\tCARD8\tinvolved_in\tGO:0051260\tPMID:33420033\tIDA\t\tP\tCaspase recruitment domain-containing protein 8\tCARD8|DACAR|KIAA0955|NDPP1\tprotein\ttaxon:9606\t20210503\tUniProt\t\tUniProtKB:Q9Y2G2-PRO_0000452848\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tQ9Y2G2\tCARD8\tinvolved_in\tGO:0051260\tPMID:34019797\tIDA\t\tP\tCaspase recruitment domain-containing protein 8\tCARD8|DACAR|KIAA0955|NDPP1\tprotein\ttaxon:9606\t20211222\tUniProt\t\tUniProtKB:Q9Y2G2-PRO_0000452848\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tU3KQ35\tTERF2\tenables\tGO:0042803\tGO_REF:0000002\tIEA\tInterPro:IPR013867\tF\tTelomeric repeat binding factor 2\tTERF2\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:U3KQ35\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tV9GYM1\tTERF2\tenables\tGO:0042803\tGO_REF:0000002\tIEA\tInterPro:IPR013867\tF\tTelomere repeat-binding factor dimerisation domain-containing protein\tTERF2\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:V9GYM1\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tV9GYY8\tKCTD15\tinvolved_in\tGO:0051260\tGO_REF:0000002\tIEA\tInterPro:IPR003131\tP\tPotassium channel tetramerization domain containing 15\tKCTD15\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:V9GYY8\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 }, { "level": "WARNING", "line": "UniProtKB\tX6RKS3\tPRNP\tinvolved_in\tGO:0051260\tGO_REF:0000002\tIEA\tInterPro:IPR000817|InterPro:IPR022416|InterPro:IPR036924\tP\tMajor prion protein\tPRNP\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:X6RKS3\n", "type": "Violates GO Rule", "message": "GORULE:0000046: The \u2018with\u2019 field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to \u2018self-binding\u2019 terms", "obj": "", "taxon": "", "rule": 46 } ], "gorule-0000050": [], "gorule-0000055": [], "gorule-0000057": [], "gorule-0000058": [], "gorule-0000061": [ { "level": "WARNING", "line": "UniProtKB\tD6RJD2\tEGFLAM\tpart_of\tGO:0009986\tPMID:23226524\tIMP\t\tC\tLaminin G domain-containing protein\tEGFLAM\tprotein\ttaxon:9606\t20130409\tCACAO\t\tUniProtKB:D6RJD2\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tH0Y3A8\tASTN2\tpart_of\tGO:0005768\tPMID:20573900\tIDA\t\tC\tMACPF domain-containing protein\tASTN2\tprotein\ttaxon:9606\t20130414\tCACAO\t\tUniProtKB:H0Y3A8\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tO00159\tMYO1C\tlocated_in\tGO:0110016\tPMID:16603771\tIDA\t\tC\tUnconventional myosin-Ic\tMYO1C\tprotein\ttaxon:9606\t20170608\tComplexPortal\t\tUniProtKB:O00159-3\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tO60506\tSYNCRIP\tlocated_in\tGO:0045293\tPMID:11134005\tNAS\t\tC\tHeterogeneous nuclear ribonucleoprotein Q\tSYNCRIP|HNRPQ|NSAP1\tprotein\ttaxon:9606\t20170410\tComplexPortal\t\tUniProtKB:O60506-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tO60583\tCCNT2\tlocated_in\tGO:0008024\tPMID:9499409\tIPI\t\tC\tCyclin-T2\tCCNT2\tprotein\ttaxon:9606\t20200625\tComplexPortal\t\tUniProtKB:O60583-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tO60583\tCCNT2\tlocated_in\tGO:0008024\tPMID:9499409\tIPI\t\tC\tCyclin-T2\tCCNT2\tprotein\ttaxon:9606\t20230211\tComplexPortal\t\tUniProtKB:O60583-2\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tO60706\tABCC9\tlocated_in\tGO:0008282\tGO_REF:0000114\tISO\tComplexPortal:CPX-181\tC\tATP-binding cassette sub-family C member 9\tABCC9|SUR2\tprotein\ttaxon:9606\t20220601\tComplexPortal\t\tUniProtKB:O60706-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tO60706\tABCC9\tlocated_in\tGO:0008282\tGO_REF:0000114\tISO\tComplexPortal:CPX-185\tC\tATP-binding cassette sub-family C member 9\tABCC9|SUR2\tprotein\ttaxon:9606\t20230101\tComplexPortal\t\tUniProtKB:O60706-2\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tO96033\tMOCS2\tlocated_in\tGO:0019008\tPMID:16021469\tIPI\t\tC\tMolybdopterin synthase sulfur carrier subunit\tMOCS2|MOCO1\tprotein\ttaxon:9606\t20210315\tComplexPortal\t\tUniProtKB:O96033\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP07992\tERCC1\tlocated_in\tGO:0070522\tPMID:16076955\tIPI\t\tC\tDNA excision repair protein ERCC-1\tERCC1\tprotein\ttaxon:9606\t20221128\tComplexPortal\t\tUniProtKB:P07992-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP10827\tTHRA\tlocated_in\tGO:0090575\tPMID:22474364\tEXP\t\tC\tThyroid hormone receptor alpha\tTHRA|EAR7|ERBA1|NR1A1|THRA1|THRA2\tprotein\ttaxon:9606\t20161219\tComplexPortal\t\tUniProtKB:P10827-2\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP21127\tCDK11B\tlocated_in\tGO:0000307\tGO_REF:0000114\tISS\tComplexPortal:CPX-341\tC\tCyclin-dependent kinase 11B\tCDK11B|CDC2L1|CDK11|PITSLREA|PK58\tprotein\ttaxon:9606\t20181011\tComplexPortal\t\tUniProtKB:P21127-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP21127\tCDK11B\tlocated_in\tGO:0000307\tGO_REF:0000114\tISS\tComplexPortal:CPX-347\tC\tCyclin-dependent kinase 11B\tCDK11B|CDC2L1|CDK11|PITSLREA|PK58\tprotein\ttaxon:9606\t20160411\tComplexPortal\t\tUniProtKB:P21127-12\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP25686\tDNAJB2\tlocated_in\tGO:0000502\tPMID:15936278\tIDA\t\tC\tDnaJ homolog subfamily B member 2\tDNAJB2|HSJ1|HSPF3\tprotein\ttaxon:9606\t20231121\tBHF-UCL\t\tUniProtKB:P25686-2\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP27986\tPIK3R1\tlocated_in\tGO:0005943\tPMID:20379207\tNAS\t\tC\tPhosphatidylinositol 3-kinase regulatory subunit alpha\tPIK3R1|GRB1\tprotein\ttaxon:9606\t20200928\tComplexPortal\t\tUniProtKB:P27986-2\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP27986\tPIK3R1\tlocated_in\tGO:0005943\tPMID:20379207\tNAS\t\tC\tPhosphatidylinositol 3-kinase regulatory subunit alpha\tPIK3R1|GRB1\tprotein\ttaxon:9606\t20200928\tComplexPortal\t\tUniProtKB:P27986-3\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP27986\tPIK3R1\tlocated_in\tGO:0005943\tPMID:28108251\tIPI\t\tC\tPhosphatidylinositol 3-kinase regulatory subunit alpha\tPIK3R1|GRB1\tprotein\ttaxon:9606\t20200928\tComplexPortal\t\tUniProtKB:P27986-3\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP30613\tPKLR\tlocated_in\tGO:1902912\tPMID:23270483\tIDA\t\tC\tPyruvate kinase PKLR\tPKLR|PK1|PKL\tprotein\ttaxon:9606\t20141016\tComplexPortal\t\tUniProtKB:P30613-2\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP35790\tCHKA\tpart_of\tGO:0005811\tPMID:34077757\tIDA\t\tC\tCholine kinase alpha\tCHKA|CHK|CKI\tprotein\ttaxon:9606\t20211105\tUniProt\t\tUniProtKB:P35790-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP58400\tNRXN1\tlocated_in\tGO:0098635\tGO_REF:0000114\tISO\tComplexPortal:CPX-4123\tC\tNeurexin-1-beta\tNRXN1\tprotein\ttaxon:9606\t20200218\tComplexPortal\t\tUniProtKB:P58400-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP58400\tNRXN1\tlocated_in\tGO:0098635\tPMID:18084303\tEXP\t\tC\tNeurexin-1-beta\tNRXN1\tprotein\ttaxon:9606\t20200218\tComplexPortal\t\tUniProtKB:P58400-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP60896\tSEM1\tcolocalizes_with\tGO:0032039\tPMID:16239144\tIDA\t\tC\t26S proteasome complex subunit SEM1\tSEM1|C7orf76|DSS1|SHFDG1|SHFM1\tprotein\ttaxon:9606\t20060726\tHGNC-UCL\t\tUniProtKB:P60896\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002325 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tP60896\tSEM1\tlocated_in\tGO:0000502\tPMID:29636472\tNAS\t\tC\t26S proteasome complex subunit SEM1\tSEM1|C7orf76|DSS1|SHFDG1|SHFM1\tprotein\ttaxon:9606\t20200928\tComplexPortal\t\tUniProtKB:P60896\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ07817\tBCL2L1\tlocated_in\tGO:0097136\tPMID:21856303\tIPI\t\tC\tBcl-2-like protein 1\tBCL2L1|BCL2L|BCLX\tprotein\ttaxon:9606\t20151202\tComplexPortal\t\tUniProtKB:Q07817-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ07817\tBCL2L1\tlocated_in\tGO:0097136\tPMID:22515821\tIPI\t\tC\tBcl-2-like protein 1\tBCL2L1|BCL2L|BCLX\tprotein\ttaxon:9606\t20220207\tComplexPortal\t\tUniProtKB:Q07817-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ07820\tMCL1\tlocated_in\tGO:0097136\tPMID:20066663\tIPI\t\tC\tInduced myeloid leukemia cell differentiation protein Mcl-1\tMCL1|BCL2L3\tprotein\ttaxon:9606\t20160913\tComplexPortal\t\tUniProtKB:Q07820-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ13765\tNACA\tlocated_in\tGO:0005854\tPMID:20214399\tIPI\t\tC\tNascent polypeptide-associated complex subunit alpha\tNACA|HSD48\tprotein\ttaxon:9606\t20200928\tComplexPortal\t\tUniProtKB:Q13765\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ15131\tCDK10\tlocated_in\tGO:0000307\tPMID:24218572\tIPI\t\tC\tCyclin-dependent kinase 10\tCDK10\tprotein\ttaxon:9606\t20160222\tComplexPortal\t\tUniProtKB:Q15131-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ8WXC6\tCOPS9\tcolocalizes_with\tGO:0008180\tPMID:23776465\tIDA\t\tC\tCOP9 signalosome complex subunit 9\tCOPS9|MYEOV2\tprotein\ttaxon:9606\t20160928\tUniProt\t\tUniProtKB:Q8WXC6-2\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002325 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ96LT7\tC9orf72\tlocated_in\tGO:0032045\tPMID:29950492\tIPI\t\tC\tGuanine nucleotide exchange factor C9orf72\tC9orf72|DENND9|DENNL72\tprotein\ttaxon:9606\t20181204\tComplexPortal\t\tUniProtKB:Q96LT7-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ9H6T3\tRPAP3\tlocated_in\tGO:0101031\tPMID:29844425\tIPI\t\tC\tRNA polymerase II-associated protein 3\tRPAP3\tprotein\ttaxon:9606\t20200928\tComplexPortal\t\tUniProtKB:Q9H6T3-2\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ9H7E2\tTDRD3\tlocated_in\tGO:0140225\tPMID:28176834\tIPI\t\tC\tTudor domain-containing protein 3\tTDRD3\tprotein\ttaxon:9606\t20180327\tComplexPortal\t\tUniProtKB:Q9H7E2-3\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ9H7P6\tMVB12B\tlocated_in\tGO:0000813\tGO_REF:0000114\tISS\tComplexPortal:CPX-7162\tC\tMultivesicular body subunit 12B\tMVB12B|C9orf28|FAM125B\tprotein\ttaxon:9606\t20220207\tComplexPortal\t\tUniProtKB:Q9H7P6-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ9H7P6\tMVB12B\tlocated_in\tGO:0000813\tPMID:18005716\tIPI\t\tC\tMultivesicular body subunit 12B\tMVB12B|C9orf28|FAM125B\tprotein\ttaxon:9606\t20220207\tComplexPortal\t\tUniProtKB:Q9H7P6-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ9UKV3\tACIN1\tcolocalizes_with\tGO:0035145\tPMID:16314458\tIDA\t\tC\tApoptotic chromatin condensation inducer in the nucleus\tACIN1|ACINUS|KIAA0670\tprotein\ttaxon:9606\t20130913\tUniProt\t\tUniProtKB:Q9UKV3-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002325 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ9UKV3\tACIN1\tcolocalizes_with\tGO:0035145\tPMID:16314458\tIDA\t\tC\tApoptotic chromatin condensation inducer in the nucleus\tACIN1|ACINUS|KIAA0670\tprotein\ttaxon:9606\t20130913\tUniProt\t\tUniProtKB:Q9UKV3-2\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002325 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ9UKV3\tACIN1\tcolocalizes_with\tGO:0035145\tPMID:16314458\tIDA\t\tC\tApoptotic chromatin condensation inducer in the nucleus\tACIN1|ACINUS|KIAA0670\tprotein\ttaxon:9606\t20130913\tUniProt\t\tUniProtKB:Q9UKV3-3\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002325 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ9UQ88\tCDK11A\tlocated_in\tGO:0000307\tPMID:18216018\tIPI\t\tC\tCyclin-dependent kinase 11A\tCDK11A|CDC2L2|CDC2L3|PITSLREB\tprotein\ttaxon:9606\t20160411\tComplexPortal\t\tUniProtKB:Q9UQ88-1\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ9UQ88\tCDK11A\tlocated_in\tGO:0000307\tPMID:18216018\tIPI\t\tC\tCyclin-dependent kinase 11A\tCDK11A|CDC2L2|CDC2L3|PITSLREB\tprotein\ttaxon:9606\t20160411\tComplexPortal\t\tUniProtKB:Q9UQ88-10\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ9Y2G2\tCARD8\tis_active_in\tGO:0140634\tPMID:32840892\tIDA\t\tC\tCaspase recruitment domain-containing protein 8\tCARD8|DACAR|KIAA0955|NDPP1\tprotein\ttaxon:9606\t20210503\tUniProt\t\tUniProtKB:Q9Y2G2-PRO_0000452848\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "UniProtKB\tQ9Y2G2\tCARD8\tis_active_in\tGO:0140634\tPMID:33542150\tIDA\t\tC\tCaspase recruitment domain-containing protein 8\tCARD8|DACAR|KIAA0955|NDPP1\tprotein\ttaxon:9606\t20210503\tUniProt\t\tUniProtKB:Q9Y2G2-PRO_0000452848\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 } ], "gorule-0000013": [], "gorule-0000020": [ { "level": "ERROR", "line": "UniProtKB\tO95278\tEPM2A\tcolocalizes_with\tGO:0005844\tPMID:11001928\tIDA\t\tC\tLaforin\tEPM2A\tprotein\ttaxon:9606\t20170328\tUniProt\t\tUniProtKB:O95278\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0005844", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tQ8IXJ6\tSIRT2\tNOT|involved_in\tGO:0016575\tPMID:24177535\tIDA\t\tP\tNAD-dependent protein deacetylase sirtuin-2\tSIRT2|SIR2L|SIR2L2\tprotein\ttaxon:9606\t20140425\tUniProt\t\tUniProtKB:Q8IXJ6-5\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016575", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tQ8IXJ6\tSIRT2\tinvolved_in\tGO:0016575\tPMID:24177535\tIDA\t\tP\tNAD-dependent protein deacetylase 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"line": "UniProtKB\tE5RHX8\tENY2\tinvolved_in\tGO:0016578\tGO_REF:0000104\tIEA\tUniRule:UR000112776\tP\tTranscription and mRNA export factor ENY2\tENY2\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:E5RHX8\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016578", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tP17861\tXBP1\tinvolved_in\tGO:0031062\tPMID:25280941\tIDA\t\tP\tX-box-binding protein 1\tXBP1|TREB5|XBP2\tprotein\ttaxon:9606\t20141103\tUniProt\t\tUniProtKB:P17861-2\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0031062", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A499FJK2\tTGFB1\tinvolved_in\tGO:0031065\tGO_REF:0000107\tIEA\tUniProtKB:P04202|ensembl:ENSMUSP00000002678\tP\tTransforming growth factor beta\tTGFB1\tprotein\ttaxon:9606\t20231122\tEnsembl\t\tUniProtKB:A0A499FJK2\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0031065", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tP29590\tPML\tinvolved_in\tGO:0031065\tPMID:11259576\tIDA\t\tP\tProtein PML\tPML|MYL|PP8675|RNF71|TRIM19\tprotein\ttaxon:9606\t20070202\tUniProt\t\tUniProtKB:P29590-5\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0031065", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A8I5KTF6\tDNMT3A\tinvolved_in\tGO:0032776\tGO_REF:0000117\tIEA\tARBA:ARBA00027317\tP\tDNA methyltransferase 3 alpha\tDNMT3A\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KTF6\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0032776", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A8I5QKW3\tDNMT3A\tinvolved_in\tGO:0032776\tGO_REF:0000117\tIEA\tARBA:ARBA00027317\tP\tDNA 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"taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A499FJK2\tTGFB1\tinvolved_in\tGO:0035066\tGO_REF:0000107\tIEA\tUniProtKB:P04202|ensembl:ENSMUSP00000002678\tP\tTransforming growth factor beta\tTGFB1\tprotein\ttaxon:9606\t20231122\tEnsembl\t\tUniProtKB:A0A499FJK2\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0035066", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tO00159\tMYO1C\tinvolved_in\tGO:0035066\tPMID:23555303\tNAS\t\tP\tUnconventional myosin-Ic\tMYO1C\tprotein\ttaxon:9606\t20170608\tComplexPortal\t\tUniProtKB:O00159-3\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0035066", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tP05067\tAPP\tinvolved_in\tGO:0035066\tPMID:19057576\tIGI\tUniProtKB:P05067-PRO_0000000097,UniProtKB:P05067-PRO_0000000098\tP\tAmyloid-beta precursor protein\tAPP|A4|AD1\tprotein\ttaxon:9606\t20211119\tARUK-UCL\thas_input(UniProtKB:P08473)\tUniProtKB:P05067-PRO_0000000099\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0035066", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tP05067\tAPP\tinvolved_in\tGO:0035066\tPMID:19057576\tIGI\tUniProtKB:P05067-PRO_0000000097,UniProtKB:P05067-PRO_0000000099\tP\tAmyloid-beta precursor protein\tAPP|A4|AD1\tprotein\ttaxon:9606\t20211119\tARUK-UCL\thas_input(UniProtKB:P08473)\tUniProtKB:P05067-PRO_0000000098\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0035066", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tP05067\tAPP\tinvolved_in\tGO:0035066\tPMID:19057576\tIGI\tUniProtKB:P05067-PRO_0000000098,UniProtKB:P05067-PRO_0000000099\tP\tAmyloid-beta precursor protein\tAPP|A4|AD1\tprotein\ttaxon:9606\t20211119\tARUK-UCL\thas_input(UniProtKB:P08473)\tUniProtKB:P05067-PRO_0000000097\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0035066", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tQ8NE71\tABCF1\tlocated_in\tGO:0042788\tPMID:19570978\tIDA\t\tC\tATP-binding cassette sub-family F member 1\tABCF1|ABC50\tprotein\ttaxon:9606\t20110111\tUniProt\t\tUniProtKB:Q8NE71-2\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0042788", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A0C4DG02\tDNMT3A\tinvolved_in\tGO:0090116\tGO_REF:0000108\tIEA\tGO:0003886\tP\tDNA (cytosine-5-)-methyltransferase\tDNMT3A\tprotein\ttaxon:9606\t20231124\tGOC\t\tUniProtKB:A0A0C4DG02\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0090116", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A2Z2CIT2\tDNMT3B\tinvolved_in\tGO:0090116\tGO_REF:0000108\tIEA\tGO:0003886\tP\tPHD-type domain-containing protein\tDNMT3B\tprotein\ttaxon:9606\t20231124\tGOC\t\tUniProtKB:A0A2Z2CIT2\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0090116", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A7I2V311\tDNMT1\tinvolved_in\tGO:0090116\tGO_REF:0000002\tIEA\tInterPro:IPR017198\tP\tDNA (cytosine-5)-methyltransferase 1\tDNMT1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:A0A7I2V311\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0090116", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A7I2V490\tDNMT1\tinvolved_in\tGO:0090116\tGO_REF:0000002\tIEA\tInterPro:IPR017198\tP\tDNA (cytosine-5)-methyltransferase\tDNMT1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:A0A7I2V490\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0090116", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A7I2V5D0\tDNMT1\tinvolved_in\tGO:0090116\tGO_REF:0000002\tIEA\tInterPro:IPR017198\tP\tDNA (cytosine-5)-methyltransferase\tDNMT1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:A0A7I2V5D0\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0090116", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A7I2V5F1\tDNMT1\tinvolved_in\tGO:0090116\tGO_REF:0000002\tIEA\tInterPro:IPR017198\tP\tDNA (cytosine-5)-methyltransferase\tDNMT1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:A0A7I2V5F1\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0090116", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A7I2V5F6\tDNMT1\tinvolved_in\tGO:0090116\tGO_REF:0000002\tIEA\tInterPro:IPR017198\tP\tDNA methyltransferase 1\tDNMT1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:A0A7I2V5F6\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0090116", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A7I2YQA8\tDNMT1\tinvolved_in\tGO:0090116\tGO_REF:0000002\tIEA\tInterPro:IPR017198\tP\tDNA (cytosine-5)-methyltransferase\tDNMT1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:A0A7I2YQA8\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0090116", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A7I2YQQ0\tDNMT1\tinvolved_in\tGO:0090116\tGO_REF:0000002\tIEA\tInterPro:IPR017198\tP\tDNA (cytosine-5)-methyltransferase\tDNMT1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:A0A7I2YQQ0\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0090116", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tF8WE91\tDNMT3A\tinvolved_in\tGO:0090116\tGO_REF:0000108\tIEA\tGO:0003886\tP\tDNA (cytosine-5-)-methyltransferase\tDNMT3A\tprotein\ttaxon:9606\t20231124\tGOC\t\tUniProtKB:F8WE91\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0090116", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tA0A6Q8PH01\tPRDM12\tinvolved_in\tGO:1900111\tGO_REF:0000002\tIEA\tInterPro:IPR017126\tP\tPR domain zinc finger protein 12\tPRDM12\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:A0A6Q8PH01\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:1900111", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "ERROR", "line": "UniProtKB\tP05067\tAPP\tinvolved_in\tGO:0043280\tPMID:21803450\tIDA\t\tP\tAmyloid-beta precursor protein\tAPP|A4|AD1\tprotein\ttaxon:9606\t20170201\tARUK-UCL\tpart_of(GO:1905893)|part_of(GO:1905896)|part_of(GO:1905898)\tUniProtKB:P05067-PRO_0000000099\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:1905893", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tQ8WXI4\tACOT11\tenables\tGO:0016290\tPMID:22897136\tIDA\t\tF\tAcyl-coenzyme A thioesterase 11\tACOT11|BFIT|KIAA0707|THEA\tprotein\ttaxon:9606\t20190211\tUniProt\t\tUniProtKB:Q8WXI4-2\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016290", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A087WUA4\tUBXN8\tinvolved_in\tGO:0030433\tGO_REF:0000002\tIEA\tInterPro:IPR017247\tP\tUBX domain-containing protein\tUBXN8\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:A0A087WUA4\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A087WV67\tUBXN8\tinvolved_in\tGO:0030433\tGO_REF:0000002\tIEA\tInterPro:IPR017247\tP\tUBX domain-containing protein\tUBXN8\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:A0A087WV67\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A590UJA9\tTMUB1\tinvolved_in\tGO:0030433\tGO_REF:0000002\tIEA\tInterPro:IPR040352\tP\tTransmembrane and ubiquitin like domain containing 1\tTMUB1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:A0A590UJA9\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KQC1\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KQC1\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KR40\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KR40\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KRL2\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KRL2\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KSC7\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KSC7\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KTC7\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KTC7\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KTD9\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KTD9\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KTW2\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KTW2\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KU57\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KU57\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KUG7\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KUG7\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KUW0\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KUW0\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KVG1\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KVG1\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KVT1\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KVT1\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KWA3\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KWA3\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KWJ1\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KWJ1\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KXM1\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KXM1\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KXV7\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KXV7\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KXY6\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KXY6\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KY03\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KY03\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KYU6\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KYU6\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8I5KYX4\tERLEC1\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tERLEC1\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8I5KYX4\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8V8TPZ4\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8V8TPZ4\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8V8TPZ9\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8V8TPZ9\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8V8TQI0\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8V8TQI0\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8V8TQI2\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8V8TQI2\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8V8TQI4\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8V8TQI4\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8V8TQI8\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8V8TQI8\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8V8TQI9\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8V8TQI9\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8V8TR31\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8V8TR31\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8V8TR34\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8V8TR34\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8V8TRD7\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8V8TRD7\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A8V8TRE0\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A8V8TRE0\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tB4E321\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:B4E321\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tB7Z7P0\tUBE4A\tinvolved_in\tGO:0030433\tGO_REF:0000002\tIEA\tInterPro:IPR045132\tP\tUbiquitin conjugation factor E4\tUBE4A\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:B7Z7P0\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tC9JCW7\tTMUB1\tinvolved_in\tGO:0030433\tGO_REF:0000002\tIEA\tInterPro:IPR040352\tP\tTransmembrane and ubiquitin-like domain-containing protein 1\tTMUB1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:C9JCW7\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tC9JE12\tTMUB1\tinvolved_in\tGO:0030433\tGO_REF:0000002\tIEA\tInterPro:IPR040352\tP\tTransmembrane and ubiquitin like domain containing 1\tTMUB1\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:C9JE12\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tE7ESS3\tTMUB2\tinvolved_in\tGO:0030433\tGO_REF:0000002\tIEA\tInterPro:IPR040352\tP\tUbiquitin-like domain-containing protein\tTMUB2\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:E7ESS3\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tF8VZI7\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:F8VZI7\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tF8W0R2\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:F8W0R2\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tF8W1N0\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:F8W1N0\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tF8W1V2\tOS9\tinvolved_in\tGO:0030433\tGO_REF:0000104\tIEA\tUniRule:UR001695774\tP\tEndoplasmic reticulum lectin\tOS9\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:F8W1V2\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tK7EKW3\tTMUB2\tinvolved_in\tGO:0030433\tGO_REF:0000002\tIEA\tInterPro:IPR040352\tP\tUbiquitin-like domain-containing protein\tTMUB2\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:K7EKW3\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tK7EP75\tUBE4B\tinvolved_in\tGO:0030433\tGO_REF:0000002\tIEA\tInterPro:IPR045132\tP\tUbiquitin conjugation factor E4\tUBE4B\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:K7EP75\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tK7EPS1\tTMUB2\tinvolved_in\tGO:0030433\tGO_REF:0000002\tIEA\tInterPro:IPR040352\tP\tTransmembrane and ubiquitin like domain containing 2\tTMUB2\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:K7EPS1\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tK7ERA7\tUBE4B\tinvolved_in\tGO:0030433\tGO_REF:0000002\tIEA\tInterPro:IPR045132\tP\tUbiquitin conjugation factor E4\tUBE4B\tprotein\ttaxon:9606\t20231122\tInterPro\t\tUniProtKB:K7ERA7\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tQ96DZ1\tERLEC1\tinvolved_in\tGO:0030433\tPMID:18502753\tIDA\t\tP\tEndoplasmic reticulum lectin 1\tERLEC1|C2orf30|XTP3TPB|UNQ1878/PRO4321\tprotein\ttaxon:9606\t20090904\tUniProt\t\tUniProtKB:Q96DZ1-1\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tX6RBG4\tUMOD\tinvolved_in\tGO:0030433\tGO_REF:0000107\tIEA\tUniProtKB:Q91X17|ensembl:ENSMUSP00000033263\tP\tUromodulin\tUMOD\tprotein\ttaxon:9606\t20231122\tEnsembl\t\tUniProtKB:X6RBG4\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tB4DP72\tCOQ5\tenables\tGO:0043333\tGO_REF:0000003\tIEA\tEC:2.1.1.201\tF\t2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial\tCOQ5\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:B4DP72\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043333", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tB4DP72\tCOQ5\tenables\tGO:0043430\tGO_REF:0000104\tIEA\tUniRule:UR000376037\tF\t2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial\tCOQ5\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:B4DP72\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043430", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A087WWT1\tSDHB\tenables\tGO:0102040\tGO_REF:0000003\tIEA\tEC:1.3.5.1\tF\tSuccinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial\tSDHB\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A087WWT1\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0102040", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tA0A087WXX8\tSDHB\tenables\tGO:0102040\tGO_REF:0000003\tIEA\tEC:1.3.5.1\tF\tSuccinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial\tSDHB|hCG_25123\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:A0A087WXX8\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0102040", "taxon": "NCBITaxon:9606", "rule": 20 }, { "level": "WARNING", "line": "UniProtKB\tD6RFM5\tSDHA\tenables\tGO:0102040\tGO_REF:0000003\tIEA\tEC:1.3.5.1\tF\tSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial\tSDHA\tprotein\ttaxon:9606\t20231122\tUniProt\t\tUniProtKB:D6RFM5\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0102040", "taxon": "NCBITaxon:9606", "rule": 20 } ], "gorule-0000027": [ { "level": "WARNING", "line": "UniProtKB\tM0QY88\tB9D2\tlocated_in\tGO:0035869\tPMID:15916950\tIDA\t\tC\tB9 domain containing 2\tB9D2\tprotein\ttaxon:9606\t20140121\tSYSCILIA_CCNET\t\tUniProtKB:M0QY88\n", "type": "Invalid identifier", "message": "GORULE:0000027: assigned_by is not present in groups reference", "obj": "SYSCILIA_CCNET", "taxon": "NCBITaxon:9606", "rule": 27 }, { "level": "WARNING", "line": "UniProtKB\tM0QY88\tB9D2\tlocated_in\tGO:0035869\tPMID:19208769\tIDA\t\tC\tB9 domain containing 2\tB9D2\tprotein\ttaxon:9606\t20140121\tSYSCILIA_CCNET\t\tUniProtKB:M0QY88\n", "type": "Invalid identifier", "message": "GORULE:0000027: assigned_by is not present in groups reference", "obj": "SYSCILIA_CCNET", "taxon": "NCBITaxon:9606", "rule": 27 }, { "level": "WARNING", "line": "UniProtKB\tM0QY88\tB9D2\tlocated_in\tGO:0035869\tPMID:21422230\tIDA\t\tC\tB9 domain containing 2\tB9D2\tprotein\ttaxon:9606\t20140121\tSYSCILIA_CCNET\t\tUniProtKB:M0QY88\n", "type": "Invalid identifier", "message": "GORULE:0000027: assigned_by is not present in groups reference", "obj": "SYSCILIA_CCNET", "taxon": "NCBITaxon:9606", "rule": 27 }, { "level": "WARNING", "line": "UniProtKB\tM0QY88\tB9D2\tlocated_in\tGO:0035869\tPMID:21763481\tIDA\t\tC\tB9 domain containing 2\tB9D2\tprotein\ttaxon:9606\t20140121\tSYSCILIA_CCNET\t\tUniProtKB:M0QY88\n", "type": "Invalid identifier", "message": "GORULE:0000027: assigned_by is not present in groups reference", "obj": "SYSCILIA_CCNET", "taxon": "NCBITaxon:9606", "rule": 27 }, { "level": "WARNING", "line": "UniProtKB\tM0QY88\tB9D2\tlocated_in\tGO:0036064\tPMID:19208769\tIDA\t\tC\tB9 domain containing 2\tB9D2\tprotein\ttaxon:9606\t20140121\tSYSCILIA_CCNET\t\tUniProtKB:M0QY88\n", "type": "Invalid identifier", "message": "GORULE:0000027: assigned_by is not present in groups reference", "obj": "SYSCILIA_CCNET", "taxon": "NCBITaxon:9606", "rule": 27 } ] } }