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Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "RGD\t3696\tpart_of\tGO:0009986\tPMID:15187084\tECO:0000314\t\t\t20200813\tMGI\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "RGD\t3696\tpart_of\tGO:0005622\tPMID:17868307\tECO:0000314\t\t\t20200814\tMGI\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "RGD\t3696\tpart_of\tGO:0030425\tPMID:9409715\tECO:0000314\t\t\t20200813\tMGI\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "RGD\t3696\tpart_of\tGO:0005886\tPMID:17868307\tECO:0000314\t\t\t20200814\tMGI\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "RGD\t3696\tpart_of\tGO:0031982\tPMID:17868307\tECO:0000314\t\t\t20200814\tMGI\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "RGD\t3696\tpart_of\tGO:0005768\tPMID:17868307\tECO:0000314\t\t\t20200814\tMGI\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "RGD\t3697\tpart_of\tGO:0009986\tPMID:15187084\tECO:0000314\t\t\t20200813\tMGI\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "RGD\t3696\tpart_of\tGO:0009986\tPMID:17868307\tECO:0000314\t\t\t20200814\tMGI\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "RGD\t3696\tpart_of\tGO:0043679\tPMID:9409715\tECO:0000314\t\t\t20200813\tMGI\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-3394-9805|noctua-model-id=gomodel:5ee8120100003004\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 } ], "gorule-0000013": [], "gorule-0000001": [ { "level": "ERROR", "line": "RGD\t3696\tacts_upstream_of_or_within\tGO:0071456\tPMID: 11288147\tECO:0000314\t\t\t20200820\tMGI\t\tnoctua-model-id=gomodel:5ee8120100003562|model-state=production|contributor=https://orcid.org/0000-0003-3394-9805", "type": "Invalid symbol", "message": "Problem parsing references", "obj": "PMID: 11288147", "taxon": "NCBITaxon:0", "rule": 1 }, { "level": "ERROR", "line": "RGD\t620518\tinvolved_in\tGO:0099502\tPMID:22036572\tECO:0000005\t\t\t20220512\tSynGO\toccurs_in(GO:0098978),occurs_in(UBERON:0002421)\tmodel-state=production|noctua-model-id=gomodel:SYNGO_1398|contributor=http://orcid.org/0000-0002-2514-0216\n", "type": "Unknown evidence class", "message": "Expecting a known ECO class ID that maps to an ECO GAF code", "obj": "ECO:0000005", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "RGD\t620518\tis_active_in\tGO:0098978\tPMID:22036572\tECO:0000005\t\t\t20220512\tSynGO\tpart_of(UBERON:0002421)\tmodel-state=production|noctua-model-id=gomodel:SYNGO_1398|contributor=http://orcid.org/0000-0002-2514-0216\n", "type": "Unknown evidence class", "message": "Expecting a known ECO class ID that maps to an ECO GAF code", "obj": "ECO:0000005", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "RGD\t620519\tinvolved_in\tGO:0099502\tPMID:22036572\tECO:0000005\t\t\t20220512\tSynGO\toccurs_in(GO:0098978),occurs_in(UBERON:0002421)\tmodel-state=production|noctua-model-id=gomodel:SYNGO_1399|contributor=http://orcid.org/0000-0002-2514-0216\n", "type": "Unknown evidence class", "message": "Expecting a known ECO class ID that maps to an ECO GAF code", "obj": "ECO:0000005", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "RGD\t620519\tis_active_in\tGO:0098978\tPMID:22036572\tECO:0000005\t\t\t20220512\tSynGO\tpart_of(UBERON:0002421)\tmodel-state=production|noctua-model-id=gomodel:SYNGO_1399|contributor=http://orcid.org/0000-0002-2514-0216\n", "type": "Unknown evidence class", "message": "Expecting a known ECO class ID that maps to an ECO GAF code", "obj": "ECO:0000005", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "RGD\t69313\tis_active_in\tGO:0031594\tPMID:26820598\tECO:0000005\t\t\t20220512\tSynGO\t\tcontributor=http://orcid.org/0000-0002-4973-5732|noctua-model-id=gomodel:SYNGO_2109|model-state=production|contributor=http://orcid.org/0000-0002-2514-0216\n", "type": "Unknown evidence class", "message": "Expecting a known ECO class ID that maps to an ECO GAF code", "obj": "ECO:0000005", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "RGD\t3728\tis_active_in\tGO:0098978\tPMID:8103915\tECO:0000005\t\t\t20220512\tSynGO\tpart_of(UBERON:0000955)\tmodel-state=production|contributor=http://orcid.org/0000-0003-1542-3498|noctua-model-id=gomodel:SYNGO_275|contributor=http://orcid.org/0000-0002-3898-5197|contributor=http://orcid.org/0000-0002-0808-7003\n", "type": "Unknown evidence class", "message": "Expecting a known ECO class ID that maps to an ECO GAF code", "obj": "ECO:0000005", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "RGD\t3728\tinvolved_in\tGO:0016079\tPMID:8103915\tECO:0000005\t\t\t20220512\tSynGO\toccurs_in(GO:0098978),occurs_in(UBERON:0000955)\tmodel-state=production|contributor=http://orcid.org/0000-0003-1542-3498|noctua-model-id=gomodel:SYNGO_275|contributor=http://orcid.org/0000-0002-3898-5197|contributor=http://orcid.org/0000-0002-0808-7003\n", "type": "Unknown evidence class", "message": "Expecting a known ECO class ID that maps to an ECO GAF code", "obj": "ECO:0000005", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "RGD\t3198\tinvolved_in\tGO:0099538\tPMID:11677256\tECO:0000005\t\t\t20220512\tSynGO\toccurs_in(GO:0098978),occurs_in(UBERON:0002421)\tmodel-state=production|contributor=http://orcid.org/0000-0003-2916-7616|contributor=http://orcid.org/0000-0002-2286-1587|noctua-model-id=gomodel:SYNGO_4055|contributor=http://orcid.org/0000-0002-2514-0216\n", "type": "Unknown evidence class", "message": "Expecting a known ECO class ID that maps to an ECO GAF code", "obj": "ECO:0000005", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "RGD\t3198\tis_active_in\tGO:0098978\tPMID:11677256\tECO:0000005\t\t\t20220512\tSynGO\tpart_of(UBERON:0002421)\tmodel-state=production|contributor=http://orcid.org/0000-0002-2286-1587|contributor=http://orcid.org/0000-0003-2916-7616|noctua-model-id=gomodel:SYNGO_4055|contributor=http://orcid.org/0000-0002-2514-0216\n", "type": "Unknown evidence class", "message": "Expecting a known ECO class ID that maps to an ECO GAF code", "obj": "ECO:0000005", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "RGD\t620475\tinvolved_in\tGO:0099538\tPMID:11677256\tECO:0000005\t\t\t20220512\tSynGO\toccurs_in(GO:0098978),occurs_in(UBERON:0002421)\tmodel-state=production|contributor=http://orcid.org/0000-0002-2286-1587|contributor=http://orcid.org/0000-0003-2916-7616|noctua-model-id=gomodel:SYNGO_4056|contributor=http://orcid.org/0000-0002-2514-0216\n", "type": "Unknown evidence class", "message": "Expecting a known ECO class ID that maps to an ECO GAF code", "obj": "ECO:0000005", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "RGD\t620475\tis_active_in\tGO:0098978\tPMID:11677256\tECO:0000005\t\t\t20220512\tSynGO\tpart_of(UBERON:0002421)\tmodel-state=production|contributor=http://orcid.org/0000-0002-2286-1587|contributor=http://orcid.org/0000-0003-2916-7616|noctua-model-id=gomodel:SYNGO_4056|contributor=http://orcid.org/0000-0002-2514-0216\n", "type": "Unknown evidence class", "message": "Expecting a known ECO class ID that maps to an ECO GAF code", "obj": "ECO:0000005", "taxon": "", "rule": 1 } ], "gorule-0000020": [ { "level": "ERROR", "line": "RGD\t69313\tinvolved_in\tGO:0042135\tPMID:26820598\tECO:0000005\t\t\t20220512\tSynGO\toccurs_in(GO:0031594)\tcontributor=http://orcid.org/0000-0002-4973-5732|noctua-model-id=gomodel:SYNGO_2109|model-state=production|contributor=http://orcid.org/0000-0002-2514-0216\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0042135", "taxon": "", "rule": 20 }, { "level": "ERROR", "line": "RGD\t2653\tinvolved_in\tGO:0042136\tPMID:8336154\tECO:0007695\t\t\t20220512\tSynGO\t\tnoctua-model-id=gomodel:SYNGO_3124|contributor=http://orcid.org/0000-0003-0593-3443|model-state=production|contributor=http://orcid.org/0000-0002-2286-1587\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0042136", "taxon": "", "rule": 20 }, { "level": "ERROR", "line": "RGD\t2653\tinvolved_in\tGO:0042136\tPMID:8336154\tECO:0006063\t\t\t20220512\tSynGO\t\tnoctua-model-id=gomodel:SYNGO_3124|contributor=http://orcid.org/0000-0003-0593-3443|model-state=production|contributor=http://orcid.org/0000-0002-2286-1587\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0042136", "taxon": "", "rule": 20 }, { "level": "ERROR", "line": "RGD\t2653\tinvolved_in\tGO:0042136\tPMID:8336154\tECO:0000005\t\t\t20220512\tSynGO\t\tnoctua-model-id=gomodel:SYNGO_3124|contributor=http://orcid.org/0000-0003-0593-3443|model-state=production|contributor=http://orcid.org/0000-0002-2286-1587\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0042136", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2933\tis_active_in\tGO:0016021\tPMID:1311032\tECO:0007719\t\t\t20220512\tSynGO\tpart_of(GO:0030868),part_of(GO:0098794),part_of(UBERON:0002037)\tcontributor=http://orcid.org/0000-0003-2533-9548|noctua-model-id=gomodel:SYNGO_160|model-state=production\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2933\tis_active_in\tGO:0016021\tPMID:1311032\tECO:0006003\t\t\t20220512\tSynGO\tpart_of(GO:0030868),part_of(GO:0098794),part_of(UBERON:0002037)\tcontributor=http://orcid.org/0000-0003-2533-9548|noctua-model-id=gomodel:SYNGO_160|model-state=production\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2933\tis_active_in\tGO:0016021\tPMID:1311032\tECO:0007719\t\t\t20220512\tSynGO\tpart_of(GO:0030868),part_of(GO:0098793),part_of(GO:0098982),part_of(UBERON:0002037)\tnoctua-model-id=gomodel:SYNGO_161|contributor=http://orcid.org/0000-0003-2533-9548|model-state=production\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2933\tis_active_in\tGO:0016021\tPMID:1311032\tECO:0006003\t\t\t20220512\tSynGO\tpart_of(GO:0030868),part_of(GO:0098793),part_of(GO:0098982),part_of(UBERON:0002037)\tnoctua-model-id=gomodel:SYNGO_161|contributor=http://orcid.org/0000-0003-2533-9548|model-state=production\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2934\tis_active_in\tGO:0030176\tPMID:10096607\tECO:0007719\t\t\t20220512\tSynGO\tpart_of(GO:0098793),part_of(UBERON:0002894)\tcontributor=http://orcid.org/0000-0003-2533-9548|noctua-model-id=gomodel:SYNGO_158|model-state=production\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2934\tis_active_in\tGO:0030176\tPMID:10096607\tECO:0006003\t\t\t20220512\tSynGO\tpart_of(GO:0098793),part_of(UBERON:0002894)\tcontributor=http://orcid.org/0000-0003-2533-9548|noctua-model-id=gomodel:SYNGO_158|model-state=production\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2934\tis_active_in\tGO:0030176\tPMID:10096607\tECO:0007719\t\t\t20220512\tSynGO\tpart_of(GO:0098793),part_of(UBERON:0001890)\tcontributor=http://orcid.org/0000-0003-2533-9548|noctua-model-id=gomodel:SYNGO_158|model-state=production\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2934\tis_active_in\tGO:0030176\tPMID:10096607\tECO:0007719\t\t\t20220512\tSynGO\tpart_of(GO:0098793),part_of(UBERON:0001876)\tcontributor=http://orcid.org/0000-0003-2533-9548|noctua-model-id=gomodel:SYNGO_158|model-state=production\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2934\tis_active_in\tGO:0030176\tPMID:10096607\tECO:0006003\t\t\t20220512\tSynGO\tpart_of(GO:0098793),part_of(UBERON:0001890)\tcontributor=http://orcid.org/0000-0003-2533-9548|noctua-model-id=gomodel:SYNGO_158|model-state=production\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2934\tis_active_in\tGO:0030176\tPMID:10096607\tECO:0006003\t\t\t20220512\tSynGO\tpart_of(GO:0098793),part_of(UBERON:0001876)\tcontributor=http://orcid.org/0000-0003-2533-9548|noctua-model-id=gomodel:SYNGO_158|model-state=production\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t735066\tis_active_in\tGO:0030285\tPMID:20053882\tECO:0006003\t\t\t20220512\tSynGO\tpart_of(GO:0098978),part_of(UBERON:0002037)\tnoctua-model-id=gomodel:SYNGO_1087|contributor=http://orcid.org/0000-0003-3185-5709|contributor=http://orcid.org/0000-0001-7351-8706|contributor=http://orcid.org/0000-0003-0938-8534|model-state=production|contributor=http://orcid.org/0000-0002-0755-5899\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030285", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t735066\tis_active_in\tGO:0030285\tPMID:20053882\tECO:0000279\t\t\t20220512\tSynGO\tpart_of(GO:0098978),part_of(UBERON:0002037)\tnoctua-model-id=gomodel:SYNGO_1087|contributor=http://orcid.org/0000-0003-3185-5709|contributor=http://orcid.org/0000-0001-7351-8706|contributor=http://orcid.org/0000-0003-0938-8534|model-state=production|contributor=http://orcid.org/0000-0002-0755-5899\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030285", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t735066\tis_active_in\tGO:0030285\tPMID:20053882\tECO:0006042\t\t\t20220512\tSynGO\tpart_of(GO:0098978),part_of(UBERON:0002037)\tnoctua-model-id=gomodel:SYNGO_1087|contributor=http://orcid.org/0000-0003-3185-5709|contributor=http://orcid.org/0000-0001-7351-8706|contributor=http://orcid.org/0000-0003-0938-8534|model-state=production|contributor=http://orcid.org/0000-0002-0755-5899\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030285", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": 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"RGD\t67378\tis_active_in\tGO:0099056\tPMID:2592994\tECO:0007719\t\t\t20220512\tSynGO\tpart_of(GO:0098978),part_of(UBERON:0005383)\tmodel-state=production|contributor=http://orcid.org/0000-0001-5518-6584|noctua-model-id=gomodel:SYNGO_2224\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0099056", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t3452\tis_active_in\tGO:0099056\tPMID:21262467\tECO:0007695\t\t\t20220512\tSynGO\tpart_of(GO:0098978),part_of(UBERON:0002421)\tmodel-state=production|contributor=http://orcid.org/0000-0001-5518-6584|noctua-model-id=gomodel:SYNGO_2246\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0099056", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": 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"RGD\t2520\tis_active_in\tGO:0099056\tPMID:18340460\tECO:0006003\t\t\t20220512\tSynGO\tpart_of(GO:0098982),part_of(UBERON:0001876)\tnoctua-model-id=gomodel:SYNGO_2509|contributor=http://orcid.org/0000-0003-0593-3443|model-state=production|contributor=http://orcid.org/0000-0002-2286-1587\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0099056", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2520\tis_active_in\tGO:0099056\tPMID:18340460\tECO:0007719\t\t\t20220512\tSynGO\tpart_of(GO:0098982),part_of(UBERON:0001876)\tnoctua-model-id=gomodel:SYNGO_2509|contributor=http://orcid.org/0000-0003-0593-3443|model-state=production|contributor=http://orcid.org/0000-0002-2286-1587\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0099056", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": 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"RGD\t2344\tis_active_in\tGO:0099056\tPMID:8182478\tECO:0006003\t\t\t20220512\tSynGO\tpart_of(GO:0098978),part_of(UBERON:0002435)\tnoctua-model-id=gomodel:SYNGO_2560|contributor=http://orcid.org/0000-0003-0593-3443|model-state=production|contributor=http://orcid.org/0000-0002-2286-1587\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0099056", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t2344\tis_active_in\tGO:0099056\tPMID:8182478\tECO:0007719\t\t\t20220512\tSynGO\tpart_of(GO:0098978),part_of(UBERON:0002435)\tnoctua-model-id=gomodel:SYNGO_2560|contributor=http://orcid.org/0000-0003-0593-3443|model-state=production|contributor=http://orcid.org/0000-0002-2286-1587\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0099056", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": 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"RGD\t628848\tis_active_in\tGO:0099056\tPMID:21666672\tECO:0005589\t\t\t20220512\tSynGO\tpart_of(GO:0044305)\tmodel-state=production|noctua-model-id=gomodel:SYNGO_3074|contributor=http://orcid.org/0000-0001-9425-2935|contributor=http://orcid.org/0000-0002-2514-0216\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0099056", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t621824\tis_active_in\tGO:0099056\tPMID:7751957\tECO:0007719\t\t\t20220512\tSynGO\tpart_of(GO:0098690),part_of(UBERON:0002037)\tcontributor=http://orcid.org/0000-0003-2533-9548|noctua-model-id=gomodel:SYNGO_334|model-state=production\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0099056", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": 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"RGD\t3455\tis_active_in\tGO:0099061\tPMID:15982644\tECO:0006003\t\t\t20220512\tSynGO\tpart_of(GO:0098978),part_of(UBERON:0001950)\tmodel-state=production|contributor=http://orcid.org/0000-0001-5518-6584|noctua-model-id=gomodel:SYNGO_2313\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0099061", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": "RGD\t3455\tis_active_in\tGO:0099061\tPMID:15982644\tECO:0006003\t\t\t20220512\tSynGO\tpart_of(GO:0098978),part_of(UBERON:0002421)\tmodel-state=production|contributor=http://orcid.org/0000-0001-5518-6584|noctua-model-id=gomodel:SYNGO_2313\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0099061", "taxon": "", "rule": 20 }, { "level": "WARNING", "line": 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