# Group: unknown - Dataset: unknown ## SUMMARY This report generated on 2024-01-05 * Associations: 649 * Lines in file (incl headers): 699 * Lines skipped: 47 ## Header From Original Association File > !gpa-version: 1.1 > !collation date: 2024-01-05 > !collated from production models in https://github.com/geneontology/noctua-models/ where col1 matches fb; special rules for MGI (https://github.com/geneontology/pipeline/issues/313) ## Contents [gorule-0000001](#gorule-0000001) [gorule-0000002](#gorule-0000002) [gorule-0000006](#gorule-0000006) [gorule-0000007](#gorule-0000007) [gorule-0000008](#gorule-0000008) [gorule-0000011](#gorule-0000011) [gorule-0000013](#gorule-0000013) [gorule-0000015](#gorule-0000015) [gorule-0000016](#gorule-0000016) [gorule-0000017](#gorule-0000017) [gorule-0000018](#gorule-0000018) [gorule-0000026](#gorule-0000026) [gorule-0000029](#gorule-0000029) [gorule-0000030](#gorule-0000030) [gorule-0000037](#gorule-0000037) [gorule-0000039](#gorule-0000039) [gorule-0000042](#gorule-0000042) [gorule-0000043](#gorule-0000043) [gorule-0000046](#gorule-0000046) [gorule-0000050](#gorule-0000050) [gorule-0000055](#gorule-0000055) [gorule-0000057](#gorule-0000057) [gorule-0000058](#gorule-0000058) [gorule-0000061](#gorule-0000061) [other](#other) ## MESSAGES ### gorule-0000001 * total: 37 #### Messages * ERROR - Invalid symbol: Problem parsing With/From column (FB:FBgn0016797, FB:FBgn0284084) -- `FB FBgn0000119 enables GO:0015026 PMID:12729465 ECO:0000316 FB:FBgn0016797, FB:FBgn0284084 20210615 FlyBase directly_negatively_regulates(GO:0008013) noctua-model-id=gomodel:6086f4f200000223|model-state=production|contributor=https://orcid.org/0000-0003-3212-6364` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0102615 | PMID:9502733) -- `FB FBgn0288966 involved_in GO:0030509 FB:FBrf0102615 | PMID:9502733 ECO:0000314 20230525 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60ad85f700000189` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0104455 | PMID:9693372) -- `FB FBgn0288966 involved_in GO:0030509 FB:FBrf0104455 | PMID:9693372 ECO:0000314 20230525 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60ad85f700000189` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0254546 | PMID:36029115) -- `FB FBgn0288966 enables GO:0001228 FB:FBrf0254546 | PMID:36029115 ECO:0000314 20230525 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60ad85f700000189` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0102615 | PMID:9502733) -- `FB FBgn0288966 is_active_in GO:0005634 FB:FBrf0102615 | PMID:9502733 ECO:0000314 20230525 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60ad85f700000189` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0209559 | PMID:20010841) -- `FB FBgn0288966 enables GO:0001228 FB:FBrf0209559 | PMID:20010841 ECO:0000314 20230525 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60ad85f700000189` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0209559 | PMID:20010841) -- `FB FBgn0288966 enables GO:0001228 FB:FBrf0209559 | PMID:20010841 ECO:0000314 20230525 FlyBase noctua-model-id=gomodel:60ad85f700000259|model-state=production|contributor=https://orcid.org/0000-0003-3212-6364` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0108165 | PMID:10320478) -- `FB FBgn0288966 involved_in GO:0032924 FB:FBrf0108165 | PMID:10320478 ECO:0000314 20230525 FlyBase noctua-model-id=gomodel:60ad85f700000259|model-state=production|contributor=https://orcid.org/0000-0003-3212-6364` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0254546 | PMID:36029115) -- `FB FBgn0288966 enables GO:0001228 FB:FBrf0254546 | PMID:36029115 ECO:0000314 20230525 FlyBase noctua-model-id=gomodel:60ad85f700000259|model-state=production|contributor=https://orcid.org/0000-0003-3212-6364` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0102615 | PMID:9502733) -- `FB FBgn0288966 is_active_in GO:0005634 FB:FBrf0102615 | PMID:9502733 ECO:0000314 20230525 FlyBase noctua-model-id=gomodel:60ad85f700000259|model-state=production|contributor=https://orcid.org/0000-0003-3212-6364` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0180485 | PMID:15511639) -- `FB FBgn0000097 involved_in GO:0007173 FB:FBrf0180485 | PMID:15511639 ECO:0000315 20230525 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60ad85f700001873` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0144882 | PMID:11850406) -- `FB FBgn0003079 enables GO:0004709 FB:FBrf0144882 | PMID:11850406 ECO:0000314 20230525 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60ad85f700001873` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0190722 | PMID:16079232) -- `FB FBgn0086358 enables GO:0035591 FB:FBrf0190722 | PMID:16079232 ECO:0000314 20230525 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000233` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0147043 | PMID:11959840) -- `FB FBgn0003867 is_active_in GO:0005615 FB:FBrf0147043 | PMID:11959840 ECO:0000314 20230524 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0104944 | PMID:9783586) -- `FB FBgn0001139 enables GO:0003714 FB:FBrf0104944 | PMID:9783586 ECO:0000316 FB:FBgn0085432 20220426 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0057542 | PMID:1378625) -- `FB FBgn0003256 is_active_in GO:0005829 FB:FBrf0057542 | PMID:1378625 ECO:0000314 20220426 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0125241 | PMID:10652276) -- `FB FBgn0262582 is_active_in GO:0005634 FB:FBrf0125241 | PMID:10652276 ECO:0000314 20220426 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0147043 | PMID:11959840) -- `FB FBgn0005390 is_active_in GO:0009897 FB:FBrf0147043 | PMID:11959840 ECO:0000314 20230524 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0100772 | PMID:9510028) -- `FB FBgn0005390 involved_in GO:0008293 FB:FBrf0100772 | PMID:9510028 ECO:0000315 20230524 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0052655 | PMID:2385293) -- `FB FBgn0003867 involved_in GO:0008293 FB:FBrf0052655 | PMID:2385293 ECO:0000316 FB:FBgn0003733 20230524 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0214255 | PMID:21683597) -- `FB FBgn0001139 involved_in GO:0008293 FB:FBrf0214255 | PMID:21683597 ECO:0000315 20220426 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0100772 | PMID:9510028) -- `FB FBgn0004650 involved_in GO:0008293 FB:FBrf0100772 | PMID:9510028 ECO:0000315 20230524 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0211365 | PMID:20457146) -- `FB FBgn0261016 involved_in GO:0008293 FB:FBrf0211365 | PMID:20457146 ECO:0000316 FB:FBgn0003733 20230524 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0211365 | PMID:20457146) -- `FB FBgn0261016 is_active_in GO:0005576 FB:FBrf0211365 | PMID:20457146 ECO:0000314 20230524 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0147043 | PMID:11959840) -- `FB FBgn0004650 is_active_in GO:0009897 FB:FBrf0147043 | PMID:11959840 ECO:0000314 20230524 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing With/From column (PANTHER:PTN000850324 | UniProtKB:Q04726 | UniProtKB:Q08117 | MGI:MGI:104633 | RGD:2731 | UniProtKB:Q04724 | RGD:3868 | MGI:MGI:104636 | UniProtKB:Q04727 | UniProtKB:Q04725 | MGI:MGI:2149593 | WB:WBGene00006773 | RGD:620292 | MGI:MGI:95806) -- `FB FBgn0001139 is_active_in GO:0005634 PMID:21873635 ECO:0000318 PANTHER:PTN000850324 | UniProtKB:Q04726 | UniProtKB:Q08117 | MGI:MGI:104633 | RGD:2731 | UniProtKB:Q04724 | RGD:3868 | MGI:MGI:104636 | UniProtKB:Q04727 | UniProtKB:Q04725 | MGI:MGI:2149593 | WB:WBGene00006773 | RGD:620292 | MGI:MGI:95806 20220426 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0219625 | PMID:23048183) -- `FB FBgn0262582 involved_in GO:0008293 FB:FBrf0219625 | PMID:23048183 ECO:0000314 20220426 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0068431 | PMID:8124723) -- `FB FBgn0003256 involved_in GO:0008293 FB:FBrf0068431 | PMID:8124723 ECO:0000316 FB:FBgn0003733 20220426 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0246880 | PMID:27601662) -- `FB FBgn0262582 enables GO:0001227 FB:FBrf0246880 | PMID:27601662 ECO:0000314 20220426 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0072711 | PMID:8047146) -- `FB FBgn0003256 enables GO:0004707 FB:FBrf0072711 | PMID:8047146 ECO:0000314 20220426 FlyBase directly_negatively_regulates(GO:0003714) model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0252517 | PMID:34856125) -- `FB FBgn0003514 enables GO:0001671 FB:FBrf0252517 | PMID:34856125 ECO:0000314 20230519 FlyBase noctua-model-id=gomodel:645d887900000706|model-state=production|contributor=https://orcid.org/0000-0003-3212-6364` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0111979 | PMID:10570971) -- `FB FBgn0026181 enables GO:0004674 FB:FBrf0111979 | PMID:10570971 ECO:0000314 20230519 FlyBase noctua-model-id=gomodel:645d887900000706|model-state=production|contributor=https://orcid.org/0000-0003-3212-6364` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0255270 | GO_REF:0000024) -- `FB FBgn0038947 enables GO:0003924 FB:FBrf0255270 | GO_REF:0000024 ECO:0000250 SGD:S000006139 20231212 FlyBase model-state=production|noctua-model-id=gomodel:65692e7e00001477|contributor=https://orcid.org/0000-0003-3212-6364` * ERROR - Invalid symbol: Problem parsing With/From column (PANTHER:PTN000277108 | SGD:S000003314 | RGD:708467) -- `FB FBgn0036928 enables GO:0030943 GOREF:0000033 ECO:0000318 PANTHER:PTN000277108 | SGD:S000003314 | RGD:708467 20231218 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:657ba49f00000064` * ERROR - Invalid symbol: Problem parsing references (FB:FBrf0255270 | GO_REF:0000024) -- `FB FBgn0032397 is_active_in GO:0005742 FB:FBrf0255270 | GO_REF:0000024 ECO:0000250 UniProtKB:P07213 20231218 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:657ba49f00000064` * ERROR - Invalid symbol: Problem parsing With/From column (PANTHER:PTN002340064 | SGD:S000005065) -- `FB FBgn0032397 involved_in GO:0030150 GOREF:0000033 ECO:0000318 PANTHER:PTN002340064 | SGD:S000005065 20231218 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:657ba49f00000064` * ERROR - Invalid symbol: Problem parsing With/From column (PANTHER:PTN002340064 | SGD:S000005065) -- `FB FBgn0032397 enables GO:0030943 GOREF:0000033 ECO:0000318 PANTHER:PTN002340064 | SGD:S000005065 20231218 FlyBase part_of(GO:0030150) model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:657ba49f00000064` ### gorule-0000002 * total: 0 ### gorule-0000006 * total: 0 ### gorule-0000007 * total: 0 ### gorule-0000008 * total: 0 ### gorule-0000011 * total: 0 ### gorule-0000013 * total: 0 ### gorule-0000015 * total: 0 ### gorule-0000016 * total: 0 ### gorule-0000017 * total: 0 ### gorule-0000018 * total: 2 #### Messages * WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `FB FBgn0000346 is_active_in GO:0099523 PMID:25953899 ECO:0000353 20220928 SynGO part_of(GO:0031594) noctua-model-id=gomodel:SYNGO_272|contributor=https://orcid.org/0000-0003-1542-3498|contributor=https://orcid.org/0000-0002-3898-5197|model-state=production|contributor=https://orcid.org/0000-0002-0808-7003 ` * WARNING - Violates GO Rule: GORULE:0000018: IPI annotations require a With/From entry -- `FB FBgn0000346 is_active_in GO:0031594 PMID:25953899 ECO:0000353 20220928 SynGO noctua-model-id=gomodel:SYNGO_272|contributor=https://orcid.org/0000-0003-1542-3498|contributor=https://orcid.org/0000-0002-3898-5197|model-state=production|contributor=https://orcid.org/0000-0002-0808-7003 ` ### gorule-0000026 * total: 10 #### Messages * ERROR - Violates GO Rule: GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources -- `FB FBgn0024913 enables GO:0043539 PMID:21873635 ECO:0000318 PANTHER:PTN000218063 20210528 FlyBase occurs_in(GO:0005615) noctua-model-id=gomodel:60ad85f700000259|model-state=production|contributor=https://orcid.org/0000-0003-3212-6364 ` * ERROR - Violates GO Rule: GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources -- `FB FBgn0024913 enables GO:0005125 PMID:21873635 ECO:0000318 PANTHER:PTN000218063 20210528 FlyBase occurs_in(GO:0005615) noctua-model-id=gomodel:60ad85f700000259|model-state=production|contributor=https://orcid.org/0000-0003-3212-6364 ` * ERROR - Violates GO Rule: GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources -- `FB FBgn0025800 enables GO:0000981 PMID:21873635 ECO:0000318 PANTHER:PTN000344419 20210528 FlyBase noctua-model-id=gomodel:60ad85f700000259|model-state=production|contributor=https://orcid.org/0000-0003-3212-6364 ` * ERROR - Violates GO Rule: GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources -- `FB FBgn0024913 is_active_in GO:0005615 PMID:21873635 ECO:0000318 PANTHER:PTN000218063 20210528 FlyBase noctua-model-id=gomodel:60ad85f700000259|model-state=production|contributor=https://orcid.org/0000-0003-3212-6364 ` * ERROR - Violates GO Rule: GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources -- `FB FBgn0284421 is_active_in GO:0009986 PMID:21873635 ECO:0000318 PANTHER:PTN000024431 20210528 FlyBase model-state=production|noctua-model-id=gomodel:60ad85f700000309|contributor=https://orcid.org/0000-0003-3212-6364 ` * ERROR - Violates GO Rule: GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources -- `FB FBgn0001139 is_active_in GO:0005634 PMID:21873635 ECO:0000318 PANTHER:PTN000850324 20210616 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60ad85f700001873 ` * ERROR - Violates GO Rule: GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources -- `FB FBgn0033483 enables GO:0038177 PMID:21873635 ECO:0000318 PANTHER:PTN001032094 20210628 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000233 ` * ERROR - Violates GO Rule: GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources -- `FB FBgn0000229 is_active_in GO:0005737 PMID:21873635 ECO:0000318 PANTHER:PTN000622075 20210628 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000233 ` * ERROR - Violates GO Rule: GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources -- `FB FBgn0003205 enables GO:0005525 PMID:21873635 ECO:0000318 PANTHER:PTN000631348 20210630 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521 ` * ERROR - Violates GO Rule: GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources -- `FB FBgn0015296 enables GO:0030971 PMID:21873635 ECO:0000318 PANTHER:PTN000818658 20210630 FlyBase model-state=production|contributor=https://orcid.org/0000-0003-3212-6364|noctua-model-id=gomodel:60d5209a00000521 ` ### gorule-0000029 * total: 0 ### gorule-0000030 * total: 0 ### gorule-0000037 * total: 0 ### gorule-0000039 * total: 0 ### gorule-0000042 * total: 0 ### gorule-0000043 * total: 0 ### gorule-0000046 * total: 0 ### gorule-0000050 * total: 0 ### gorule-0000055 * total: 0 ### gorule-0000057 * total: 0 ### gorule-0000058 * total: 0 ### gorule-0000061 * total: 0 ### other * total: 0