format-version: 1.2
data-version: go/releases/2026-05-05/imports/ncbitaxon_import.owl
idspace: oboInOwl http://www.geneontology.org/formats/oboInOwl# 
ontology: go/imports/ncbitaxon_import

[Term]
id: NCBITaxon:1
name: root
namespace: ncbi_taxonomy
synonym: "all" RELATED synonym []
xref: GC_ID:1
xref: PMID:30365038
xref: PMID:32761142

[Term]
id: NCBITaxon:100226
name: Streptomyces coelicolor A3(2)
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:12000953
xref: PMID:8843436
is_a: NCBITaxon:1902 ! Streptomyces coelicolor
relationship: RO:0002162 NCBITaxon:100226 ! Streptomyces coelicolor A3(2)
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:1003877
name: Benincaseae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3650 ! Cucurbitaceae
relationship: RO:0002162 NCBITaxon:1003877 ! Benincaseae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:100474
name: Batrachochytrium
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1142503 ! Rhizophydiales incertae sedis
relationship: RO:0002162 NCBITaxon:100474 ! Batrachochytrium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:10066
name: Muridae
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:15371245
is_a: NCBITaxon:337687 ! Muroidea
disjoint_from: NCBITaxon:687453 ! Platacanthomyidae
relationship: RO:0002162 NCBITaxon:10066 ! Muridae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:10088
name: Mus <genus>
namespace: ncbi_taxonomy
synonym: "mice" EXACT genbank_common_name []
synonym: "mouse" EXACT OMO:0003003 []
synonym: "Mus" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:39107 ! Murinae
disjoint_from: NCBITaxon:10114 ! Rattus
relationship: RO:0002162 NCBITaxon:10088 ! Mus <genus>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:10090
name: Mus musculus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:85055
synonym: "house mouse" EXACT genbank_common_name []
synonym: "mouse" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:862507 ! Mus <subgenus>
relationship: RO:0002162 NCBITaxon:10090 ! Mus musculus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:10114
name: Rattus
namespace: ncbi_taxonomy
synonym: "rat" EXACT OMO:0003003 []
synonym: "rats" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:39107 ! Murinae
relationship: RO:0002162 NCBITaxon:10114 ! Rattus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:10116
name: Rattus norvegicus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:36465
synonym: "brown rat" EXACT OMO:0003003 []
synonym: "Mus norvegicus" RELATED synonym []
synonym: "Norway rat" EXACT genbank_common_name []
synonym: "rat" EXACT OMO:0003003 []
synonym: "rats" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:10114 ! Rattus
relationship: RO:0002162 NCBITaxon:10116 ! Rattus norvegicus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:10226
name: Placozoa
namespace: ncbi_taxonomy
synonym: "placozoan" EXACT OMO:0003003 []
synonym: "placozoans" EXACT genbank_common_name []
synonym: "placozoans" RELATED blast_name []
xref: GC_ID:1
xref: PMID:30063702
is_a: NCBITaxon:6072 ! Eumetazoa
disjoint_from: NCBITaxon:33213 ! Bilateria
disjoint_from: NCBITaxon:6073 ! Cnidaria
relationship: RO:0002162 NCBITaxon:10226 ! Placozoa
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:10227
name: Trichoplax
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2493110 ! Trichoplacidae
relationship: RO:0002162 NCBITaxon:10227 ! Trichoplax
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:10228
name: Trichoplax adhaerens
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:10227 ! Trichoplax
relationship: RO:0002162 NCBITaxon:10228 ! Trichoplax adhaerens
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:10239
name: Viruses
namespace: ncbi_taxonomy
synonym: "Vira" RELATED synonym []
synonym: "Viridae" RELATED synonym []
synonym: "viruses" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:1 ! root
disjoint_from: NCBITaxon:131567 ! cellular organisms
relationship: RO:0002162 NCBITaxon:10239 ! Viruses
property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_acellular_root
property_value: TAXRANK:1000000 TAXRANK:9000001

[Term]
id: NCBITaxon:102804
name: Asteroideae
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:18375151
is_a: NCBITaxon:4210 ! Asteraceae
disjoint_from: NCBITaxon:219120 ! Cichorioideae
relationship: RO:0002162 NCBITaxon:102804 ! Asteroideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:102814
name: Heliantheae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:911341 ! Heliantheae alliance
relationship: RO:0002162 NCBITaxon:102814 ! Heliantheae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:1035538
name: Mamiellophyceae
namespace: ncbi_taxonomy
synonym: "prasinophytes" RELATED in_part []
xref: GC_ID:1
xref: PMID:23020233
is_a: NCBITaxon:3041 ! Chlorophyta
disjoint_from: NCBITaxon:2692248 ! core chlorophytes
relationship: RO:0002162 NCBITaxon:1035538 ! Mamiellophyceae
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:109871
name: Batrachochytrium dendrobatidis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:81068
synonym: "amphibian chytrid" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:100474 ! Batrachochytrium
relationship: RO:0002162 NCBITaxon:109871 ! Batrachochytrium dendrobatidis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:1106
name: Chloroflexaceae
namespace: ncbi_taxonomy
synonym: "filamentous anoxygenic phototrophic bacteria" EXACT genbank_common_name []
synonym: "photosynthetic flexibacteria" EXACT OMO:0003003 []
xref: GC_ID:11
xref: PMID:22903492
is_a: NCBITaxon:1508594 ! Chloroflexineae
relationship: RO:0002162 NCBITaxon:1106 ! Chloroflexaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:1107
name: Chloroflexus
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:4374148
is_a: NCBITaxon:1106 ! Chloroflexaceae
relationship: RO:0002162 NCBITaxon:1107 ! Chloroflexus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:1108
name: Chloroflexus aurantiacus
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:4374148
is_a: NCBITaxon:1107 ! Chloroflexus
relationship: RO:0002162 NCBITaxon:1108 ! Chloroflexus aurantiacus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:1111708
name: Synechocystis sp. PCC 6803 substr. Kazusa
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:1148 ! Synechocystis sp. PCC 6803
relationship: RO:0002162 NCBITaxon:1111708 ! Synechocystis sp. PCC 6803 substr. Kazusa

[Term]
id: NCBITaxon:1113537
name: Chlamydia/Chlamydophila group
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:10319462
xref: PMID:11211265
xref: PMID:21048221
xref: PMID:21048222
xref: PMID:23620152
is_a: NCBITaxon:809 ! Chlamydiaceae
relationship: RO:0002162 NCBITaxon:1113537 ! Chlamydia/Chlamydophila group

[Term]
id: NCBITaxon:1117
name: Cyanobacteriota
namespace: ncbi_taxonomy
synonym: "blue-green algae" EXACT OMO:0003003 []
synonym: "blue-green bacteria" EXACT OMO:0003003 []
synonym: "cyanobacteria" EXACT genbank_common_name []
synonym: "cyanobacteria" RELATED blast_name []
synonym: "Cyanobacteriophyta" RELATED synonym []
synonym: "Cyanophycota" RELATED synonym []
synonym: "Cyanophyta" RELATED synonym []
synonym: "cyanophytes" EXACT OMO:0003003 []
synonym: "Oxygenic photosynthetic bacteria" EXACT equivalent_name []
synonym: "Oxyphotobacteria" RELATED synonym []
xref: GC_ID:11
xref: PMID:11542017
xref: PMID:15388760
xref: PMID:20190018
xref: PMID:24408952
xref: PMID:24709563
xref: PMID:25505344
xref: PMID:31618454
xref: PMID:9382701
is_a: NCBITaxon:1798711 ! Cyanobacteriota/Melainabacteria group
relationship: RO:0002162 NCBITaxon:1117 ! Cyanobacteriota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:112252
name: Fungi incertae sedis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:451834
xref: GC_ID:1
is_a: NCBITaxon:4751 ! Fungi
disjoint_from: NCBITaxon:451864 ! Dikarya
relationship: RO:0002162 NCBITaxon:112252 ! Fungi incertae sedis

[Term]
id: NCBITaxon:112509
name: Hordeum vulgare subsp. vulgare
namespace: ncbi_taxonomy
alt_id: NCBITaxon:4514
synonym: "domesticated barley" EXACT genbank_common_name []
synonym: "Hordeum sativum" RELATED synonym []
synonym: "Hordeum vulgare var. nudum" RELATED synonym []
synonym: "Hordeum vulgare var. vulgare" RELATED synonym []
synonym: "two-rowed barley" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:4513 ! Hordeum vulgare
relationship: RO:0002162 NCBITaxon:112509 ! Hordeum vulgare subsp. vulgare
property_value: has_rank NCBITaxon:subspecies
property_value: TAXRANK:1000000 TAXRANK:0000023

[Term]
id: NCBITaxon:1131492
name: Aspergillaceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5042 ! Eurotiales
relationship: RO:0002162 NCBITaxon:1131492 ! Aspergillaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:1142
name: Synechocystis
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:1890428 ! Merismopediaceae
relationship: RO:0002162 NCBITaxon:1142 ! Synechocystis
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:1142503
name: Rhizophydiales incertae sedis
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:451442 ! Rhizophydiales
relationship: RO:0002162 NCBITaxon:1142503 ! Rhizophydiales incertae sedis

[Term]
id: NCBITaxon:114656
name: Funariidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3214 ! Bryopsida
relationship: RO:0002162 NCBITaxon:114656 ! Funariidae
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:1148
name: Synechocystis sp. PCC 6803
namespace: ncbi_taxonomy
synonym: "Aphanocapsa sp. (strain N-1)" EXACT equivalent_name []
synonym: "Aphanocapsa sp. N-1" EXACT equivalent_name []
synonym: "Synechocystis sp. (ATCC 27184)" EXACT equivalent_name []
synonym: "Synechocystis sp. (PCC 6803)" EXACT equivalent_name []
synonym: "Synechocystis sp. (strain PCC 6803)" EXACT equivalent_name []
synonym: "Synechocystis sp. ATCC 27184" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:30590650
xref: PMID:41920185
is_a: NCBITaxon:2640012 ! unclassified Synechocystis
relationship: RO:0002162 NCBITaxon:1148 ! Synechocystis sp. PCC 6803
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:116557
name: Phyllopoda
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6658 ! Branchiopoda
relationship: RO:0002162 NCBITaxon:116557 ! Phyllopoda
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:116561
name: Anomopoda
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6665 ! Cladocera
relationship: RO:0002162 NCBITaxon:116561 ! Anomopoda
property_value: has_rank NCBITaxon:infraorder
property_value: TAXRANK:1000000 TAXRANK:0000013

[Term]
id: NCBITaxon:117565
name: Myxini
namespace: ncbi_taxonomy
synonym: "Agnatha" RELATED in_part []
synonym: "Hyperotreti" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1476529 ! Cyclostomata
disjoint_from: NCBITaxon:117569 ! Hyperoartia
relationship: RO:0002162 NCBITaxon:117565 ! Myxini
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:117569
name: Hyperoartia
namespace: ncbi_taxonomy
synonym: "Agnatha" RELATED in_part []
synonym: "Cephalaspidomorphi" RELATED in_part []
synonym: "lampreys" EXACT genbank_common_name []
synonym: "Monorhina" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:1476529 ! Cyclostomata
relationship: RO:0002162 NCBITaxon:117569 ! Hyperoartia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:117570
name: Teleostomi
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7776 ! Gnathostomata <vertebrates>
relationship: RO:0002162 NCBITaxon:117570 ! Teleostomi
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:117571
name: Euteleostomi
namespace: ncbi_taxonomy
alt_id: NCBITaxon:40673
synonym: "bony vertebrates" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:117570 ! Teleostomi
relationship: RO:0002162 NCBITaxon:117571 ! Euteleostomi
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:118883
name: Sulfolobaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:2281 ! Sulfolobales
relationship: RO:0002162 NCBITaxon:118883 ! Sulfolobaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:118964
name: Deinococcales
namespace: ncbi_taxonomy
synonym: "radio-resistant micrococci" EXACT OMO:0003003 []
xref: GC_ID:11
xref: PMID:9103641
is_a: NCBITaxon:188787 ! Deinococci
relationship: RO:0002162 NCBITaxon:118964 ! Deinococcales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:118968
name: Coxiellaceae
namespace: ncbi_taxonomy
synonym: "Coxiella group" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:118969 ! Legionellales
relationship: RO:0002162 NCBITaxon:118968 ! Coxiellaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:118969
name: Legionellales
namespace: ncbi_taxonomy
synonym: "Legionellaceae group" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:1236 ! Gammaproteobacteria
disjoint_from: NCBITaxon:135614 ! Lysobacterales
disjoint_from: NCBITaxon:135622 ! Alteromonadales
disjoint_from: NCBITaxon:135623 ! Vibrionales
disjoint_from: NCBITaxon:135625 ! Pasteurellales
disjoint_from: NCBITaxon:72274 ! Pseudomonadales
disjoint_from: NCBITaxon:91347 ! Enterobacterales
relationship: RO:0002162 NCBITaxon:118969 ! Legionellales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:119089
name: Chromadorea
namespace: ncbi_taxonomy
alt_id: NCBITaxon:27837
synonym: "Adenophorea" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:6231 ! Nematoda
relationship: RO:0002162 NCBITaxon:119089 ! Chromadorea
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:1206794
name: Ecdysozoa
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33317 ! Protostomia
disjoint_from: NCBITaxon:2697495 ! Spiralia
relationship: RO:0002162 NCBITaxon:1206794 ! Ecdysozoa
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1206795
name: Lophotrochozoa
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2697495 ! Spiralia
relationship: RO:0002162 NCBITaxon:1206795 ! Lophotrochozoa
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1224
name: Pseudomonadota
namespace: ncbi_taxonomy
synonym: "\"Alphaproteobacteriota\" Whitman et al. 2018" RELATED synonym []
synonym: "Alphaproteobacteriota" RELATED synonym []
synonym: "Proteobacteria" RELATED synonym []
synonym: "proteobacteria" EXACT genbank_common_name []
synonym: "proteobacteria" RELATED blast_name []
synonym: "Proteobacteriota" RELATED synonym []
synonym: "purple photosynthetic bacteria and relatives" EXACT OMO:0003003 []
xref: GC_ID:11
xref: PMID:11321122
xref: PMID:11837318
is_a: NCBITaxon:3379134 ! Pseudomonadati
disjoint_from: NCBITaxon:1783257 ! PVC group
disjoint_from: NCBITaxon:1783270 ! FCB group
disjoint_from: NCBITaxon:200783 ! Aquificota
disjoint_from: NCBITaxon:200940 ! Thermodesulfobacteriota
disjoint_from: NCBITaxon:203691 ! Spirochaetota
disjoint_from: NCBITaxon:29547 ! Campylobacterota
disjoint_from: NCBITaxon:40117 ! Nitrospirota
disjoint_from: NCBITaxon:68297 ! Dictyoglomota
relationship: RO:0002162 NCBITaxon:1224 ! Pseudomonadota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:122586
name: Neisseria meningitidis MC58
namespace: ncbi_taxonomy
synonym: "Neisseria meningitidis serogroup B strain MC58" RELATED synonym []
xref: GC_ID:11
xref: PMID:10710307
is_a: NCBITaxon:491 ! Neisseria meningitidis serogroup B
relationship: RO:0002162 NCBITaxon:122586 ! Neisseria meningitidis MC58
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:123365
name: Neoteleostei
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1489388 ! Euteleosteomorpha
relationship: RO:0002162 NCBITaxon:123365 ! Neoteleostei
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:123366
name: Eurypterygia
namespace: ncbi_taxonomy
synonym: "Eurypterygii" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:123365 ! Neoteleostei
relationship: RO:0002162 NCBITaxon:123366 ! Eurypterygia
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:123367
name: Ctenosquamata
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:123366 ! Eurypterygia
relationship: RO:0002162 NCBITaxon:123367 ! Ctenosquamata
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:123368
name: Acanthomorphata
namespace: ncbi_taxonomy
synonym: "Acanthomorpha" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:123367 ! Ctenosquamata
relationship: RO:0002162 NCBITaxon:123368 ! Acanthomorphata
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:123369
name: Euacanthomorphacea
namespace: ncbi_taxonomy
synonym: "Euacanthomorpha" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:123368 ! Acanthomorphata
relationship: RO:0002162 NCBITaxon:123369 ! Euacanthomorphacea
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1236
name: Gammaproteobacteria
namespace: ncbi_taxonomy
synonym: "g-proteobacteria" EXACT genbank_common_name []
synonym: "g-proteobacteria" RELATED blast_name []
synonym: "gamma proteobacteria" RELATED synonym []
synonym: "gamma subdivision" RELATED synonym []
synonym: "gamma subgroup" RELATED synonym []
synonym: "Proteobacteria gamma subdivision" RELATED synonym []
synonym: "Pseudomonadia" RELATED synonym []
synonym: "Purple bacteria, gamma subdivision" RELATED synonym []
xref: GC_ID:11
xref: PMID:23334881
is_a: NCBITaxon:1224 ! Pseudomonadota
disjoint_from: NCBITaxon:28211 ! Alphaproteobacteria
disjoint_from: NCBITaxon:28216 ! Betaproteobacteria
relationship: RO:0002162 NCBITaxon:1236 ! Gammaproteobacteria
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:1239
name: Bacillota
namespace: ncbi_taxonomy
synonym: "Bacillaeota" RELATED synonym []
synonym: "Bacillota corrig. Gibbons and Murray 2021" RELATED synonym []
synonym: "Bacillus/Clostridium group" RELATED synonym []
synonym: "clostridial firmicutes" EXACT OMO:0003003 []
synonym: "Clostridium group firmicutes" RELATED synonym []
synonym: "firmicutes" EXACT genbank_common_name []
synonym: "firmicutes" RELATED blast_name []
synonym: "Low G+C firmicutes" RELATED synonym []
synonym: "low G+C Gram-positive bacteria" EXACT OMO:0003003 []
synonym: "low GC Gram+" EXACT OMO:0003003 []
xref: GC_ID:11
xref: PMID:10555317
xref: PMID:11034484
xref: PMID:11542017
xref: PMID:15143038
xref: PMID:25403554
xref: PMID:37409558
xref: PMID:38376502
is_a: NCBITaxon:1783272 ! Bacillati
disjoint_from: NCBITaxon:1798711 ! Cyanobacteriota/Melainabacteria group
disjoint_from: NCBITaxon:200795 ! Chloroflexota
disjoint_from: NCBITaxon:201174 ! Actinomycetota
disjoint_from: NCBITaxon:544448 ! Mycoplasmatota
relationship: RO:0002162 NCBITaxon:1239 ! Bacillota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:126287
name: Didelphinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9265 ! Didelphidae
relationship: RO:0002162 NCBITaxon:126287 ! Didelphinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:1279
name: Staphylococcus
namespace: ncbi_taxonomy
synonym: "Aurococcus" RELATED synonym []
xref: GC_ID:11
xref: PMID:10319469
xref: PMID:10319495
xref: PMID:10425778
xref: PMID:10758876
xref: PMID:12656157
xref: PMID:17220435
xref: PMID:9734063
is_a: NCBITaxon:90964 ! Staphylococcaceae
relationship: RO:0002162 NCBITaxon:1279 ! Staphylococcus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:127906
name: Vibrio cholerae O1
namespace: ncbi_taxonomy
synonym: "Vibrio cholerae serogroup O1" EXACT equivalent_name []
xref: GC_ID:11
is_a: NCBITaxon:666 ! Vibrio cholerae
relationship: RO:0002162 NCBITaxon:127906 ! Vibrio cholerae O1
property_value: has_rank NCBITaxon:serogroup
property_value: TAXRANK:1000000 TAXRANK:0001006

[Term]
id: NCBITaxon:1280
name: Staphylococcus aureus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:325213
alt_id: NCBITaxon:3452276
alt_id: NCBITaxon:3452277
alt_id: NCBITaxon:46170
alt_id: NCBITaxon:72759
synonym: "Micrococcus aureus" RELATED synonym []
synonym: "Micrococcus pyogenes" RELATED synonym []
synonym: "Staphylococcus aureus subsp. anaerobius" RELATED synonym []
synonym: "Staphylococcus pyogenes aureus" RELATED synonym []
synonym: "Staphylococcus pyogenes citreus" RELATED synonym []
xref: GC_ID:11
xref: PMID:31023808
xref: PMID:8573498
is_a: NCBITaxon:1279 ! Staphylococcus
relationship: RO:0002162 NCBITaxon:1280 ! Staphylococcus aureus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:1286322
name: Leishmaniinae
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:22845426
is_a: NCBITaxon:5654 ! Trypanosomatidae
disjoint_from: NCBITaxon:5690 ! Trypanosoma
relationship: RO:0002162 NCBITaxon:1286322 ! Leishmaniinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:1292243
name: Continenticola
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6159 ! Tricladida
relationship: RO:0002162 NCBITaxon:1292243 ! Continenticola
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:1292248
name: Planarioidea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1292243 ! Continenticola
relationship: RO:0002162 NCBITaxon:1292248 ! Planarioidea
property_value: has_rank NCBITaxon:superfamily
property_value: TAXRANK:1000000 TAXRANK:0000018

[Term]
id: NCBITaxon:1293361
name: Cenchrinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147428 ! Paniceae
relationship: RO:0002162 NCBITaxon:1293361 ! Cenchrinae
property_value: has_rank NCBITaxon:subtribe
property_value: TAXRANK:1000000 TAXRANK:0000028

[Term]
id: NCBITaxon:1297
name: Deinococcota
namespace: ncbi_taxonomy
synonym: "Deinococcaeota" RELATED synonym []
synonym: "Deinococcus-Thermus" RELATED synonym []
synonym: "Thermus/Deinococcus group" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:27506333
xref: PMID:29458499
is_a: NCBITaxon:3384194 ! Thermotogati
disjoint_from: NCBITaxon:200918 ! Thermotogota
relationship: RO:0002162 NCBITaxon:1297 ! Deinococcota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:1298
name: Deinococcus
namespace: ncbi_taxonomy
synonym: "Deinobacter" RELATED synonym []
xref: GC_ID:11
xref: PMID:9103641
is_a: NCBITaxon:183710 ! Deinococcaceae
relationship: RO:0002162 NCBITaxon:1298 ! Deinococcus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:1299
name: Deinococcus radiodurans
namespace: ncbi_taxonomy
synonym: "Deinococcus radiidurans" EXACT equivalent_name []
synonym: "Micrococcus radiodurans" RELATED synonym []
xref: GC_ID:11
xref: PMID:14435920
is_a: NCBITaxon:1298 ! Deinococcus
relationship: RO:0002162 NCBITaxon:1299 ! Deinococcus radiodurans
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:13
name: Dictyoglomus
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:203488 ! Dictyoglomaceae
relationship: RO:0002162 NCBITaxon:13 ! Dictyoglomus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:1300
name: Streptococcaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:186826 ! Lactobacillales
relationship: RO:0002162 NCBITaxon:1300 ! Streptococcaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:1301
name: Streptococcus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:948104
synonym: "Okadaella" RELATED synonym []
xref: GC_ID:11
xref: PMID:10555340
xref: PMID:14657115
xref: PMID:1720654
xref: PMID:19620365
xref: PMID:19880633
xref: PMID:7537076
xref: PMID:8995803
is_a: NCBITaxon:1300 ! Streptococcaceae
relationship: RO:0002162 NCBITaxon:1301 ! Streptococcus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:1304792
name: Tenebrionidae incertae sedis
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7065 ! Tenebrionidae
relationship: RO:0002162 NCBITaxon:1304792 ! Tenebrionidae incertae sedis

[Term]
id: NCBITaxon:1307775
name: Anserineae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1307796 ! Chenopodioideae
relationship: RO:0002162 NCBITaxon:1307775 ! Anserineae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:1307796
name: Chenopodioideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3563 ! Amaranthaceae
relationship: RO:0002162 NCBITaxon:1307796 ! Chenopodioideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:131209
name: Zygnematophyceae
namespace: ncbi_taxonomy
synonym: "conjugating green algae" EXACT OMO:0003003 []
synonym: "Conjugatophyceae" RELATED synonym []
synonym: "Gamophyceae" RELATED synonym []
synonym: "Gamophyta" RELATED synonym []
synonym: "Zygnemophyceae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:131221 ! Streptophytina
disjoint_from: NCBITaxon:3193 ! Embryophyta
relationship: RO:0002162 NCBITaxon:131209 ! Zygnematophyceae
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:131221
name: Streptophytina
namespace: ncbi_taxonomy
synonym: "Charophyta/Embryophyta group" RELATED synonym []
synonym: "charophyte/embryophyte group" EXACT equivalent_name []
xref: GC_ID:1
is_a: NCBITaxon:35493 ! Streptophyta
relationship: RO:0002162 NCBITaxon:131221 ! Streptophytina
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:1313
name: Streptococcus pneumoniae
namespace: ncbi_taxonomy
synonym: "Diplococcus pneumoniae" RELATED synonym []
synonym: "Micrococcus pneumoniae" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:1301 ! Streptococcus
relationship: RO:0002162 NCBITaxon:1313 ! Streptococcus pneumoniae
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:131567
name: cellular organisms
namespace: ncbi_taxonomy
synonym: "biota" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1 ! root
relationship: RO:0002162 NCBITaxon:131567 ! cellular organisms
property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_cellular_root
property_value: TAXRANK:1000000 TAXRANK:9000002

[Term]
id: NCBITaxon:1329799
name: Archelosauria
namespace: ncbi_taxonomy
synonym: "Archosauria-Testudines" RELATED synonym []
synonym: "Testudines + Archosauria group" RELATED synonym []
xref: GC_ID:1
xref: PMID:22839753
xref: PMID:25450099
is_a: NCBITaxon:32561 ! Sauria
disjoint_from: NCBITaxon:8504 ! Lepidosauria
relationship: RO:0002162 NCBITaxon:1329799 ! Archelosauria
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1329911
name: Toxicofera
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:16286089
xref: PMID:19281946
xref: PMID:22982760
is_a: NCBITaxon:1329912 ! Episquamata
relationship: RO:0002162 NCBITaxon:1329911 ! Toxicofera
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1329912
name: Episquamata
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:16286089
xref: PMID:22982760
is_a: NCBITaxon:1329950 ! Unidentata
relationship: RO:0002162 NCBITaxon:1329912 ! Episquamata
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1329950
name: Unidentata
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:22982760
is_a: NCBITaxon:1329961 ! Bifurcata
relationship: RO:0002162 NCBITaxon:1329950 ! Unidentata
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1329961
name: Bifurcata
namespace: ncbi_taxonomy
synonym: "split-tongued squamates" EXACT genbank_common_name []
xref: GC_ID:1
xref: PMID:22982760
is_a: NCBITaxon:8509 ! Squamata
relationship: RO:0002162 NCBITaxon:1329961 ! Bifurcata
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:13332
name: Amborella
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:22097 ! Amborellaceae
relationship: RO:0002162 NCBITaxon:13332 ! Amborella
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:13333
name: Amborella trichopoda
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:13332 ! Amborella
relationship: RO:0002162 NCBITaxon:13333 ! Amborella trichopoda
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:133551
name: Eleutherozoa
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7586 ! Echinodermata
relationship: RO:0002162 NCBITaxon:133551 ! Eleutherozoa
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1338369
name: Dipnotetrapodomorpha
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:8287 ! Sarcopterygii
relationship: RO:0002162 NCBITaxon:1338369 ! Dipnotetrapodomorpha
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1351751
name: Parastagonospora
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5020 ! Phaeosphaeriaceae
relationship: RO:0002162 NCBITaxon:1351751 ! Parastagonospora
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:135461
name: Bacillus subtilis subsp. subtilis
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:10425781
is_a: NCBITaxon:1423 ! Bacillus subtilis
relationship: RO:0002162 NCBITaxon:135461 ! Bacillus subtilis subsp. subtilis
property_value: has_rank NCBITaxon:subspecies
property_value: TAXRANK:1000000 TAXRANK:0000023

[Term]
id: NCBITaxon:1355477
name: Bradyrhizobium diazoefficiens
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1077521
alt_id: NCBITaxon:1440275
alt_id: NCBITaxon:1440289
alt_id: NCBITaxon:1440328
alt_id: NCBITaxon:1440329
alt_id: NCBITaxon:1440357
alt_id: NCBITaxon:1440361
alt_id: NCBITaxon:1440363
alt_id: NCBITaxon:1440364
alt_id: NCBITaxon:1440385
alt_id: NCBITaxon:1440398
alt_id: NCBITaxon:502063
alt_id: NCBITaxon:630889
alt_id: NCBITaxon:630900
synonym: "Bradyrhizobium japonicum group Ia" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:374 ! Bradyrhizobium
relationship: RO:0002162 NCBITaxon:1355477 ! Bradyrhizobium diazoefficiens
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:135614
name: Lysobacterales
namespace: ncbi_taxonomy
synonym: "Xanthomonadales" RELATED synonym []
synonym: "Xanthomonadales Saddler and Bradbury 2005" RELATED synonym []
xref: GC_ID:11
xref: PMID:19786109
xref: PMID:24408949
xref: PMID:25481407
is_a: NCBITaxon:1236 ! Gammaproteobacteria
disjoint_from: NCBITaxon:135622 ! Alteromonadales
disjoint_from: NCBITaxon:135623 ! Vibrionales
disjoint_from: NCBITaxon:135625 ! Pasteurellales
disjoint_from: NCBITaxon:72274 ! Pseudomonadales
disjoint_from: NCBITaxon:91347 ! Enterobacterales
relationship: RO:0002162 NCBITaxon:135614 ! Lysobacterales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:135621
name: Pseudomonadaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:72274 ! Pseudomonadales
relationship: RO:0002162 NCBITaxon:135621 ! Pseudomonadaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:135622
name: Alteromonadales
namespace: ncbi_taxonomy
synonym: "Alteromonadaceae group" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:1236 ! Gammaproteobacteria
disjoint_from: NCBITaxon:135623 ! Vibrionales
disjoint_from: NCBITaxon:135625 ! Pasteurellales
disjoint_from: NCBITaxon:72274 ! Pseudomonadales
disjoint_from: NCBITaxon:91347 ! Enterobacterales
relationship: RO:0002162 NCBITaxon:135622 ! Alteromonadales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:135623
name: Vibrionales
namespace: ncbi_taxonomy
synonym: "'Vibrionales'" RELATED synonym []
synonym: "Vibrionaceae group" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:1236 ! Gammaproteobacteria
disjoint_from: NCBITaxon:135625 ! Pasteurellales
disjoint_from: NCBITaxon:72274 ! Pseudomonadales
disjoint_from: NCBITaxon:91347 ! Enterobacterales
relationship: RO:0002162 NCBITaxon:135623 ! Vibrionales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:135625
name: Pasteurellales
namespace: ncbi_taxonomy
synonym: "Pasteruellaceae group" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:1236 ! Gammaproteobacteria
disjoint_from: NCBITaxon:72274 ! Pseudomonadales
disjoint_from: NCBITaxon:91347 ! Enterobacterales
relationship: RO:0002162 NCBITaxon:135625 ! Pasteurellales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:13615
name: Monodelphis
namespace: ncbi_taxonomy
synonym: "short-tailed opossums" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:126287 ! Didelphinae
relationship: RO:0002162 NCBITaxon:13615 ! Monodelphis
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:13616
name: Monodelphis domestica
namespace: ncbi_taxonomy
synonym: "Didelphys domestica" RELATED synonym []
synonym: "gray short-tailed opossum" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:13615 ! Monodelphis
relationship: RO:0002162 NCBITaxon:13616 ! Monodelphis domestica
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:13684
name: Parastagonospora nodorum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:54791
synonym: "Depazea nodorum" RELATED synonym []
synonym: "Leptosphaeria nodorum" RELATED synonym []
synonym: "Phaeosphaeria nodorum" RELATED synonym []
synonym: "Septoria nodorum" RELATED synonym []
synonym: "Stagonospora nodorum" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1351751 ! Parastagonospora
relationship: RO:0002162 NCBITaxon:13684 ! Parastagonospora nodorum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:136841
name: Pseudomonas aeruginosa group
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:286 ! Pseudomonas
relationship: RO:0002162 NCBITaxon:136841 ! Pseudomonas aeruginosa group
property_value: has_rank species_group
property_value: TAXRANK:1000000 TAXRANK:0000010

[Term]
id: NCBITaxon:13773
name: Pyrobaculum aerophilum
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:7692819
is_a: NCBITaxon:2276 ! Pyrobaculum
relationship: RO:0002162 NCBITaxon:13773 ! Pyrobaculum aerophilum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:13792
name: Mamiellales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1035538 ! Mamiellophyceae
relationship: RO:0002162 NCBITaxon:13792 ! Mamiellales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:1385
name: Caryophanales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2954866
synonym: "Bacillales" RELATED synonym []
synonym: "Bacillus/Staphylococcus group" RELATED synonym []
xref: GC_ID:11
xref: PMID:30896383
is_a: NCBITaxon:91061 ! Bacilli
disjoint_from: NCBITaxon:186826 ! Lactobacillales
relationship: RO:0002162 NCBITaxon:1385 ! Caryophanales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:1386
name: Bacillus <firmicutes>
namespace: ncbi_taxonomy
synonym: "Bacillus" EXACT scientific_name []
synonym: "Bacillus rRNA group 1" EXACT OMO:0003003 []
xref: GC_ID:11
xref: PMID:10843090
xref: PMID:11491334
xref: PMID:1742196
xref: PMID:2223602
xref: PMID:23475340
xref: PMID:7727277
xref: PMID:8138135
xref: PMID:8863420
is_a: NCBITaxon:186817 ! Bacillaceae
relationship: RO:0002162 NCBITaxon:1386 ! Bacillus <firmicutes>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:1396
name: Bacillus cereus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1158119
alt_id: NCBITaxon:1169733
alt_id: NCBITaxon:1219392
alt_id: NCBITaxon:1219400
alt_id: NCBITaxon:1219408
alt_id: NCBITaxon:1219409
alt_id: NCBITaxon:1270321
alt_id: NCBITaxon:1271755
alt_id: NCBITaxon:1429436
alt_id: NCBITaxon:1451271
alt_id: NCBITaxon:1461830
alt_id: NCBITaxon:1494584
alt_id: NCBITaxon:1680999
alt_id: NCBITaxon:1683514
alt_id: NCBITaxon:1781304
alt_id: NCBITaxon:1781305
alt_id: NCBITaxon:540964
alt_id: NCBITaxon:861188
alt_id: NCBITaxon:941950
alt_id: NCBITaxon:941951
alt_id: NCBITaxon:941952
synonym: "Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)" RELATED synonym []
synonym: "Bacillus endorhythmos" RELATED synonym []
synonym: "Bacillus medusa" RELATED synonym []
xref: GC_ID:11
xref: PMID:9542081
is_a: NCBITaxon:86661 ! Bacillus cereus group
relationship: RO:0002162 NCBITaxon:1396 ! Bacillus cereus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:1423
name: Bacillus subtilis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1042380
alt_id: NCBITaxon:1042381
alt_id: NCBITaxon:1042382
alt_id: NCBITaxon:1224247
alt_id: NCBITaxon:1232470
alt_id: NCBITaxon:1232819
alt_id: NCBITaxon:1232822
alt_id: NCBITaxon:1232824
alt_id: NCBITaxon:1232825
alt_id: NCBITaxon:1232828
alt_id: NCBITaxon:1232830
alt_id: NCBITaxon:1232840
alt_id: NCBITaxon:1232841
alt_id: NCBITaxon:1232844
alt_id: NCBITaxon:1429427
alt_id: NCBITaxon:1429428
alt_id: NCBITaxon:1451270
alt_id: NCBITaxon:1451272
alt_id: NCBITaxon:1494536
alt_id: NCBITaxon:1494586
alt_id: NCBITaxon:1617262
alt_id: NCBITaxon:1652099
alt_id: NCBITaxon:1695905
alt_id: NCBITaxon:1707495
alt_id: NCBITaxon:1760969
alt_id: NCBITaxon:1828507
alt_id: NCBITaxon:387338
alt_id: NCBITaxon:523730
alt_id: NCBITaxon:941949
alt_id: NCBITaxon:981081
synonym: "Bacillus mesentericus" RELATED in_part []
synonym: "Bacillus natto" RELATED synonym []
synonym: "Bacillus subtilis/Bacillus globigii" RELATED in_part []
synonym: "Bacillus uniflagellatus" RELATED synonym []
synonym: "Vibrio subtilis" RELATED synonym []
xref: GC_ID:11
xref: PMID:11211269
is_a: NCBITaxon:653685 ! Bacillus subtilis group
relationship: RO:0002162 NCBITaxon:1423 ! Bacillus subtilis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:142796
name: Eumycetozoa
namespace: ncbi_taxonomy
synonym: "Eumycetozoa Zopf, 1884" RELATED synonym []
synonym: "Mycetozoa" RELATED synonym []
synonym: "mycetozoans" RELATED synonym []
xref: GC_ID:1
xref: PMID:11062127
xref: PMID:9342353
is_a: NCBITaxon:2605435 ! Evosea
disjoint_from: NCBITaxon:555406 ! Archamoebae
relationship: RO:0002162 NCBITaxon:142796 ! Eumycetozoa
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:1437010
name: Boreoeutheria
namespace: ncbi_taxonomy
synonym: "Boreotheria" RELATED synonym []
xref: GC_ID:1
xref: PMID:11743200
xref: PMID:11791233
is_a: NCBITaxon:9347 ! Eutheria
relationship: RO:0002162 NCBITaxon:1437010 ! Boreoeutheria
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1437180
name: Acrogymnospermae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:58024 ! Spermatophyta
disjoint_from: NCBITaxon:3398 ! Magnoliopsida
relationship: RO:0002162 NCBITaxon:1437180 ! Acrogymnospermae
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1437183
name: Mesangiospermae
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:25249442
is_a: NCBITaxon:3398 ! Magnoliopsida
disjoint_from: NCBITaxon:261009 ! Amborellales
relationship: RO:0002162 NCBITaxon:1437183 ! Mesangiospermae
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1437197
name: Petrosaviidae
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:26350789
is_a: NCBITaxon:4447 ! Liliopsida
disjoint_from: NCBITaxon:16360 ! Alismatales
relationship: RO:0002162 NCBITaxon:1437197 ! Petrosaviidae
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:1437201
name: Pentapetalae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:91827 ! Gunneridae
relationship: RO:0002162 NCBITaxon:1437201 ! Pentapetalae
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1445966
name: Gnetidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3372 ! Gnetopsida
relationship: RO:0002162 NCBITaxon:1445966 ! Gnetidae
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:1462606
name: Glycine subgen. Soja
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3846 ! Glycine
relationship: RO:0002162 NCBITaxon:1462606 ! Glycine subgen. Soja
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:147100
name: Rhabditophora
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1628689
alt_id: NCBITaxon:166126
alt_id: NCBITaxon:6169
xref: GC_ID:1
is_a: NCBITaxon:6157 ! Platyhelminthes
relationship: RO:0002162 NCBITaxon:147100 ! Rhabditophora
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:147367
name: Oryzoideae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1647564
synonym: "Ehrhartoideae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:359160 ! BOP clade
disjoint_from: NCBITaxon:147368 ! Pooideae
relationship: RO:0002162 NCBITaxon:147367 ! Oryzoideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:147368
name: Pooideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:359160 ! BOP clade
relationship: RO:0002162 NCBITaxon:147368 ! Pooideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:147369
name: Panicoideae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:219388
synonym: "Centothecoideae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:147370 ! PACMAD clade
relationship: RO:0002162 NCBITaxon:147369 ! Panicoideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:147370
name: PACMAD clade
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4479 ! Poaceae
disjoint_from: NCBITaxon:359160 ! BOP clade
relationship: RO:0002162 NCBITaxon:147370 ! PACMAD clade
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:147380
name: Oryzeae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147367 ! Oryzoideae
relationship: RO:0002162 NCBITaxon:147380 ! Oryzeae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:147385
name: Brachypodieae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2822797 ! Stipodae
relationship: RO:0002162 NCBITaxon:147385 ! Brachypodieae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:147389
name: Triticeae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1648038 ! Triticodae
relationship: RO:0002162 NCBITaxon:147389 ! Triticeae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:147428
name: Paniceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1648036 ! Panicodae
relationship: RO:0002162 NCBITaxon:147428 ! Paniceae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:147429
name: Andropogoneae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1648033 ! Andropogonodae
relationship: RO:0002162 NCBITaxon:147429 ! Andropogoneae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:147537
name: Saccharomycotina
namespace: ncbi_taxonomy
synonym: "budding yeasts & allies" EXACT genbank_common_name []
synonym: "budding yeasts & allies" RELATED blast_name []
synonym: "true yeasts" EXACT OMO:0003003 []
xref: GC_ID:1
xref: PMID:38895705
is_a: NCBITaxon:716545 ! saccharomyceta
disjoint_from: NCBITaxon:147538 ! Pezizomycotina
relationship: RO:0002162 NCBITaxon:147537 ! Saccharomycotina
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:147538
name: Pezizomycotina
namespace: ncbi_taxonomy
synonym: "Euascomycota" RELATED synonym []
synonym: "filamentous ascomycetes" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:716545 ! saccharomyceta
relationship: RO:0002162 NCBITaxon:147538 ! Pezizomycotina
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:147541
name: Dothideomycetes
namespace: ncbi_taxonomy
synonym: "bitunicate ascomycetes" RELATED in_part []
synonym: "Loculoascomycetes" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:715962 ! dothideomyceta
relationship: RO:0002162 NCBITaxon:147541 ! Dothideomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:147545
name: Eurotiomycetes
namespace: ncbi_taxonomy
alt_id: NCBITaxon:147540
synonym: "bitunicate ascomycetes" RELATED in_part []
synonym: "Loculoascomycetes" RELATED in_part []
synonym: "Plectomycetes" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:716546 ! leotiomyceta
disjoint_from: NCBITaxon:715962 ! dothideomyceta
disjoint_from: NCBITaxon:715989 ! sordariomyceta
relationship: RO:0002162 NCBITaxon:147545 ! Eurotiomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:147548
name: Leotiomycetes
namespace: ncbi_taxonomy
alt_id: NCBITaxon:194550
xref: GC_ID:1
xref: PMID:32647610
is_a: NCBITaxon:715989 ! sordariomyceta
disjoint_from: NCBITaxon:147550 ! Sordariomycetes
relationship: RO:0002162 NCBITaxon:147548 ! Leotiomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:147550
name: Sordariomycetes
namespace: ncbi_taxonomy
synonym: "Pyrenomycetes" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:715989 ! sordariomyceta
relationship: RO:0002162 NCBITaxon:147550 ! Sordariomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:147554
name: Schizosaccharomycetes
namespace: ncbi_taxonomy
synonym: "Archiascomycota" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:451866 ! Taphrinomycotina
relationship: RO:0002162 NCBITaxon:147554 ! Schizosaccharomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:1476529
name: Cyclostomata
namespace: ncbi_taxonomy
synonym: "Agnatha" RELATED synonym []
synonym: "jawless vertebrates" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:7742 ! Vertebrata <vertebrates>
disjoint_from: NCBITaxon:7776 ! Gnathostomata <vertebrates>
relationship: RO:0002162 NCBITaxon:1476529 ! Cyclostomata
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1477431
name: Streptomyces albidoflavus group
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:19515522
xref: PMID:20068235
is_a: NCBITaxon:1883 ! Streptomyces
relationship: RO:0002162 NCBITaxon:1477431 ! Streptomyces albidoflavus group
property_value: has_rank species_group
property_value: TAXRANK:1000000 TAXRANK:0000010

[Term]
id: NCBITaxon:1485
name: Clostridium
namespace: ncbi_taxonomy
alt_id: NCBITaxon:69207
synonym: "Anaerobacter" RELATED synonym []
synonym: "Anaerobacter Duda et al. 1996" RELATED synonym []
xref: GC_ID:11
xref: PMID:26643615
xref: PMID:27488356
is_a: NCBITaxon:31979 ! Clostridiaceae
relationship: RO:0002162 NCBITaxon:1485 ! Clostridium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:1489100
name: Holostei
namespace: ncbi_taxonomy
synonym: "bowfins and gars" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:41665 ! Neopterygii
disjoint_from: NCBITaxon:32443 ! Teleostei
relationship: RO:0002162 NCBITaxon:1489100 ! Holostei
property_value: has_rank NCBITaxon:infraclass
property_value: TAXRANK:1000000 TAXRANK:0000019

[Term]
id: NCBITaxon:1489341
name: Osteoglossocephalai
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:32443 ! Teleostei
relationship: RO:0002162 NCBITaxon:1489341 ! Osteoglossocephalai
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1489388
name: Euteleosteomorpha
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:186625 ! Clupeocephala
disjoint_from: NCBITaxon:186634 ! Otomorpha
relationship: RO:0002162 NCBITaxon:1489388 ! Euteleosteomorpha
property_value: has_rank NCBITaxon:cohort
property_value: TAXRANK:1000000 TAXRANK:0001010

[Term]
id: NCBITaxon:1489872
name: Percomorphaceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:123369 ! Euacanthomorphacea
relationship: RO:0002162 NCBITaxon:1489872 ! Percomorphaceae
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1489908
name: Ovalentaria
namespace: ncbi_taxonomy
synonym: "Stiassnyiformes" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1489872 ! Percomorphaceae
relationship: RO:0002162 NCBITaxon:1489908 ! Ovalentaria
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1489913
name: Atherinomorphae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:32456
synonym: "Atherinomorpha" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1489908 ! Ovalentaria
relationship: RO:0002162 NCBITaxon:1489913 ! Atherinomorphae
property_value: has_rank NCBITaxon:superorder
property_value: TAXRANK:1000000 TAXRANK:0000020

[Term]
id: NCBITaxon:1491
name: Clostridium botulinum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:29368
synonym: "Bacillus botulinus" RELATED synonym []
synonym: "Bacillus putrificus" RELATED synonym []
synonym: "Botulobacillus botulinus" RELATED synonym []
synonym: "Clostridium botulinum subsp. botulinum" RELATED synonym []
synonym: "Clostridium putrificum" RELATED synonym []
synonym: "Ermengemillus botulinus" RELATED synonym []
synonym: "Pacinia putrifica" RELATED synonym []
xref: GC_ID:11
xref: PMID:10028279
xref: PMID:15244052
is_a: NCBITaxon:3691983 ! Clostridium botulinum group
relationship: RO:0002162 NCBITaxon:1491 ! Clostridium botulinum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:1502711
name: Erythranthe
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:41399 ! Phrymaceae
relationship: RO:0002162 NCBITaxon:1502711 ! Erythranthe
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:1508594
name: Chloroflexineae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:22903492
is_a: NCBITaxon:32064 ! Chloroflexales
relationship: RO:0002162 NCBITaxon:1508594 ! Chloroflexineae
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:1521260
name: Lycopodiopsida
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3242
alt_id: NCBITaxon:3248
synonym: "club mosses" EXACT OMO:0003003 []
synonym: "club-mosses" EXACT OMO:0003003 []
synonym: "clubmosses" EXACT genbank_common_name []
synonym: "clubmosses" RELATED blast_name []
synonym: "Lycopodiidae" RELATED synonym []
synonym: "Lycopodiophyta" RELATED synonym []
xref: GC_ID:1
xref: PMID:21616899
is_a: NCBITaxon:58023 ! Tracheophyta
disjoint_from: NCBITaxon:78536 ! Euphyllophyta
relationship: RO:0002162 NCBITaxon:1521260 ! Lycopodiopsida
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:1525212
name: Bathycoccaceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:13792 ! Mamiellales
relationship: RO:0002162 NCBITaxon:1525212 ! Bathycoccaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:1535325
name: Candida/Lodderomyces clade
namespace: ncbi_taxonomy
xref: GC_ID:12
is_a: NCBITaxon:766764 ! Debaryomycetaceae
relationship: RO:0002162 NCBITaxon:1535325 ! Candida/Lodderomyces clade
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:15367
name: Brachypodium
namespace: ncbi_taxonomy
synonym: "false bromes" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:147385 ! Brachypodieae
relationship: RO:0002162 NCBITaxon:15367 ! Brachypodium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:15368
name: Brachypodium distachyon
namespace: ncbi_taxonomy
synonym: "annual false brome" EXACT OMO:0003003 []
synonym: "Bromus distachyos" RELATED synonym []
synonym: "false brome" EXACT OMO:0003003 []
synonym: "purple false brome" EXACT OMO:0003003 []
synonym: "stiff brome" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:15367 ! Brachypodium
relationship: RO:0002162 NCBITaxon:15368 ! Brachypodium distachyon
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:1549675
name: Galloanserae
namespace: ncbi_taxonomy
synonym: "ducks, geese, chickens, fowl, quail, currasows and allies" EXACT OMO:0003003 []
synonym: "Galloanseri" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:8825 ! Neognathae
relationship: RO:0002162 NCBITaxon:1549675 ! Galloanserae
property_value: has_rank NCBITaxon:superorder
property_value: TAXRANK:1000000 TAXRANK:0000020

[Term]
id: NCBITaxon:155616
name: Tremellomycetes
namespace: ncbi_taxonomy
alt_id: NCBITaxon:165804
alt_id: NCBITaxon:165805
synonym: "Heterobasidiomycetes" RELATED synonym []
synonym: "Tremellomycetidae" EXACT equivalent_name []
xref: GC_ID:1
xref: PMID:26955199
is_a: NCBITaxon:5302 ! Agaricomycotina
relationship: RO:0002162 NCBITaxon:155616 ! Tremellomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:162425
name: Aspergillus nidulans
namespace: ncbi_taxonomy
alt_id: NCBITaxon:5072
synonym: "Aspergillus nidulans (Eidam) G. Winter, 1884" RELATED synonym []
synonym: "Aspergillus nidulellus" RELATED synonym []
synonym: "Emericella nidulans" RELATED synonym []
synonym: "Sterigmatocystis nidulans" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:2720870 ! Nidulantes
relationship: RO:0002162 NCBITaxon:162425 ! Aspergillus nidulans
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:162484
name: Pucciniomycetes
namespace: ncbi_taxonomy
synonym: "Urediniomycetidae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:29000 ! Pucciniomycotina
relationship: RO:0002162 NCBITaxon:162484 ! Pucciniomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:16360
name: Alismatales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:16361
alt_id: NCBITaxon:4448
alt_id: NCBITaxon:4453
alt_id: NCBITaxon:4708
synonym: "Alismatiflorae" RELATED in_part []
synonym: "Ariflorae" RELATED in_part []
synonym: "Spathiflorae" RELATED synonym []
xref: GC_ID:1
xref: PMID:26350789
is_a: NCBITaxon:4447 ! Liliopsida
relationship: RO:0002162 NCBITaxon:16360 ! Alismatales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:1637
name: Listeria
namespace: ncbi_taxonomy
synonym: "Listerella" RELATED synonym []
xref: GC_ID:11
xref: PMID:10408878
xref: PMID:15709360
xref: PMID:1713054
xref: PMID:1899799
xref: PMID:8427807
xref: PMID:8782674
xref: PMID:9226919
xref: PMID:9542083
is_a: NCBITaxon:186820 ! Listeriaceae
relationship: RO:0002162 NCBITaxon:1637 ! Listeria
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:163735
name: Phaseoleae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2233855 ! indigoferoid/millettioid clade
relationship: RO:0002162 NCBITaxon:163735 ! Phaseoleae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:163742
name: Trifolieae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2233839 ! IRL clade
relationship: RO:0002162 NCBITaxon:163742 ! Trifolieae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:1639
name: Listeria monocytogenes
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1634566
alt_id: NCBITaxon:2293539
alt_id: NCBITaxon:2293540
alt_id: NCBITaxon:2293541
alt_id: NCBITaxon:2293542
alt_id: NCBITaxon:2293543
alt_id: NCBITaxon:2293544
alt_id: NCBITaxon:2293545
alt_id: NCBITaxon:2293546
alt_id: NCBITaxon:2293547
alt_id: NCBITaxon:2364651
alt_id: NCBITaxon:2364652
alt_id: NCBITaxon:2364653
alt_id: NCBITaxon:2364654
alt_id: NCBITaxon:2364655
alt_id: NCBITaxon:2364656
alt_id: NCBITaxon:2364657
alt_id: NCBITaxon:2364658
alt_id: NCBITaxon:2364659
alt_id: NCBITaxon:2364660
alt_id: NCBITaxon:2482733
alt_id: NCBITaxon:2482734
alt_id: NCBITaxon:2482735
alt_id: NCBITaxon:2482736
alt_id: NCBITaxon:2482737
alt_id: NCBITaxon:2482738
alt_id: NCBITaxon:2482739
alt_id: NCBITaxon:2482740
alt_id: NCBITaxon:2482741
alt_id: NCBITaxon:2482742
alt_id: NCBITaxon:2482743
alt_id: NCBITaxon:2482744
alt_id: NCBITaxon:2482745
alt_id: NCBITaxon:2482746
alt_id: NCBITaxon:2482747
alt_id: NCBITaxon:2482748
alt_id: NCBITaxon:2482749
alt_id: NCBITaxon:2484857
alt_id: NCBITaxon:2484858
alt_id: NCBITaxon:2485082
alt_id: NCBITaxon:2485083
alt_id: NCBITaxon:2485084
alt_id: NCBITaxon:2485085
alt_id: NCBITaxon:2485086
alt_id: NCBITaxon:2485087
alt_id: NCBITaxon:2485088
alt_id: NCBITaxon:2485089
alt_id: NCBITaxon:2485090
alt_id: NCBITaxon:2485091
alt_id: NCBITaxon:2485092
alt_id: NCBITaxon:2485093
alt_id: NCBITaxon:2485094
alt_id: NCBITaxon:2485095
alt_id: NCBITaxon:2485096
alt_id: NCBITaxon:2486732
alt_id: NCBITaxon:2486733
alt_id: NCBITaxon:2486734
alt_id: NCBITaxon:2486735
alt_id: NCBITaxon:2486736
alt_id: NCBITaxon:2486737
alt_id: NCBITaxon:2486738
alt_id: NCBITaxon:2486739
alt_id: NCBITaxon:2486740
alt_id: NCBITaxon:2486741
synonym: "Bacterium monocytogenes" RELATED synonym []
synonym: "Bacterium monocytogenes hominis" RELATED synonym []
synonym: "Corynebacterium infantisepticum" RELATED synonym []
synonym: "Corynebacterium parvulum" RELATED synonym []
synonym: "Erysipelothrix monocytogenes" RELATED synonym []
synonym: "Listerella hepatolytica" RELATED synonym []
xref: GC_ID:11
xref: PMID:17773427
xref: PMID:1906732
xref: PMID:8782698
is_a: NCBITaxon:1637 ! Listeria
relationship: RO:0002162 NCBITaxon:1639 ! Listeria monocytogenes
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:1639119
name: Plasmodiidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5819 ! Haemosporida
relationship: RO:0002162 NCBITaxon:1639119 ! Plasmodiidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:164328
name: Phytophthora ramorum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:332201
synonym: "sudden oak death agent" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:4783 ! Phytophthora
relationship: RO:0002162 NCBITaxon:164328 ! Phytophthora ramorum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:1643678
name: Nitrososphaeria
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:651137 ! Nitrososphaerota
relationship: RO:0002162 NCBITaxon:1643678 ! Nitrososphaeria
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:1643688
name: Leptospirales
namespace: ncbi_taxonomy
synonym: "Leptospiriales" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:3118682 ! Leptospiria
relationship: RO:0002162 NCBITaxon:1643688 ! Leptospirales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:1648017
name: Hordeinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147389 ! Triticeae
disjoint_from: NCBITaxon:1648030 ! Triticinae
relationship: RO:0002162 NCBITaxon:1648017 ! Hordeinae
property_value: has_rank NCBITaxon:subtribe
property_value: TAXRANK:1000000 TAXRANK:0000028

[Term]
id: NCBITaxon:1648021
name: Oryzinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147380 ! Oryzeae
relationship: RO:0002162 NCBITaxon:1648021 ! Oryzinae
property_value: has_rank NCBITaxon:subtribe
property_value: TAXRANK:1000000 TAXRANK:0000028

[Term]
id: NCBITaxon:1648028
name: Sorghinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147429 ! Andropogoneae
disjoint_from: NCBITaxon:1648029 ! Tripsacinae
relationship: RO:0002162 NCBITaxon:1648028 ! Sorghinae
property_value: has_rank NCBITaxon:subtribe
property_value: TAXRANK:1000000 TAXRANK:0000028

[Term]
id: NCBITaxon:1648029
name: Tripsacinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147429 ! Andropogoneae
relationship: RO:0002162 NCBITaxon:1648029 ! Tripsacinae
property_value: has_rank NCBITaxon:subtribe
property_value: TAXRANK:1000000 TAXRANK:0000028

[Term]
id: NCBITaxon:1648030
name: Triticinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147389 ! Triticeae
relationship: RO:0002162 NCBITaxon:1648030 ! Triticinae
property_value: has_rank NCBITaxon:subtribe
property_value: TAXRANK:1000000 TAXRANK:0000028

[Term]
id: NCBITaxon:1648033
name: Andropogonodae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147369 ! Panicoideae
disjoint_from: NCBITaxon:1648036 ! Panicodae
relationship: RO:0002162 NCBITaxon:1648033 ! Andropogonodae

[Term]
id: NCBITaxon:1648036
name: Panicodae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147369 ! Panicoideae
relationship: RO:0002162 NCBITaxon:1648036 ! Panicodae

[Term]
id: NCBITaxon:1648038
name: Triticodae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147368 ! Pooideae
disjoint_from: NCBITaxon:2822797 ! Stipodae
relationship: RO:0002162 NCBITaxon:1648038 ! Triticodae

[Term]
id: NCBITaxon:1649845
name: Yersinia pseudotuberculosis complex
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:629 ! Yersinia <enterobacteria>
relationship: RO:0002162 NCBITaxon:1649845 ! Yersinia pseudotuberculosis complex
property_value: has_rank species_group
property_value: TAXRANK:1000000 TAXRANK:0000010

[Term]
id: NCBITaxon:16714
name: Juglandaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:60414
synonym: "Rhoipteleaceae" RELATED synonym []
synonym: "walnut family" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:3502 ! Fagales
relationship: RO:0002162 NCBITaxon:16714 ! Juglandaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:16718
name: Juglans
namespace: ncbi_taxonomy
synonym: "walnuts" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:16714 ! Juglandaceae
relationship: RO:0002162 NCBITaxon:16718 ! Juglans
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:169700
name: Coryphoideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4710 ! Arecaceae
relationship: RO:0002162 NCBITaxon:169700 ! Coryphoideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:169748
name: Phoeniceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:169700 ! Coryphoideae
relationship: RO:0002162 NCBITaxon:169748 ! Phoeniceae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:1699513
name: Myrtoideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3931 ! Myrtaceae
relationship: RO:0002162 NCBITaxon:1699513 ! Myrtoideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:1699524
name: Eucalypteae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1699513 ! Myrtoideae
relationship: RO:0002162 NCBITaxon:1699524 ! Eucalypteae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:169963
name: Listeria monocytogenes EGD-e
namespace: ncbi_taxonomy
synonym: "Listeria monocytogenes ATCC BAA-679" RELATED synonym []
synonym: "Listeria monocytogenes EGDe" EXACT equivalent_name []
synonym: "Listeria monocytogenes str. EGD-e" EXACT equivalent_name []
synonym: "Listeria monocytogenes strain EGD-e" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:11679669
is_a: NCBITaxon:1639 ! Listeria monocytogenes
relationship: RO:0002162 NCBITaxon:169963 ! Listeria monocytogenes EGD-e
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:170
name: Leptospiraceae
namespace: ncbi_taxonomy
synonym: "Leptospiraceae Hovind-Hougen 1979 (Approved Lists 1980)" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:1643688 ! Leptospirales
relationship: RO:0002162 NCBITaxon:170 ! Leptospiraceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:171
name: Leptospira
namespace: ncbi_taxonomy
alt_id: NCBITaxon:29512
alt_id: NCBITaxon:29514
alt_id: NCBITaxon:29516
xref: GC_ID:11
xref: PMID:10425768
xref: PMID:11497225
xref: PMID:1581182
xref: PMID:9103653
is_a: NCBITaxon:170 ! Leptospiraceae
relationship: RO:0002162 NCBITaxon:171 ! Leptospira
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:171101
name: Streptococcus pneumoniae R6
namespace: ncbi_taxonomy
synonym: "Streptococcus pneumoniae (strain ATCC BAA-255 / R6)" RELATED synonym []
synonym: "Streptococcus pneumoniae str. R6" RELATED synonym []
xref: GC_ID:11
xref: PMID:11544234
is_a: NCBITaxon:1313 ! Streptococcus pneumoniae
relationship: RO:0002162 NCBITaxon:171101 ! Streptococcus pneumoniae R6
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:171549
name: Bacteroidales
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:28905708
is_a: NCBITaxon:200643 ! Bacteroidia
relationship: RO:0002162 NCBITaxon:171549 ! Bacteroidales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:171637
name: Amygdaloideae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:171636
alt_id: NCBITaxon:721786
alt_id: NCBITaxon:721809
synonym: "Kerriodae" RELATED synonym []
synonym: "Maloideae" RELATED synonym []
synonym: "Spiraeoideae" RELATED synonym []
xref: GC_ID:1
xref: PMID:24631854
is_a: NCBITaxon:3745 ! Rosaceae
relationship: RO:0002162 NCBITaxon:171637 ! Amygdaloideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:1728959
name: Aurantioideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:23513 ! Rutaceae
relationship: RO:0002162 NCBITaxon:1728959 ! Aurantioideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:173
name: Leptospira interrogans
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2843297
alt_id: NCBITaxon:2843299
synonym: "Leptospira icteroides" RELATED synonym []
synonym: "Spirochaeta biflexa" RELATED in_part []
synonym: "Spirochaeta icterogenes" RELATED synonym []
synonym: "Spirochaeta icterohaemorrhagiae" RELATED synonym []
synonym: "Spirochaeta interrogans" RELATED synonym []
synonym: "Spirochaeta nodosa" RELATED synonym []
xref: GC_ID:11
xref: PMID:15545494
xref: PMID:19867994
xref: PMID:19972157
xref: PMID:25288661
xref: PMID:9542090
is_a: NCBITaxon:171 ! Leptospira
relationship: RO:0002162 NCBITaxon:173 ! Leptospira interrogans
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:1760
name: Actinomycetes
namespace: ncbi_taxonomy
alt_id: NCBITaxon:85003
synonym: "Actinobacteria Stackebrandt et al. 1997" RELATED synonym []
synonym: "Actinomycetia" RELATED synonym []
synonym: "high G+C Gram-positive bacteria" EXACT genbank_common_name []
synonym: "high G+C Gram-positive bacteria" RELATED blast_name []
xref: GC_ID:11
xref: PMID:10028260
xref: PMID:11155976
xref: PMID:11321122
xref: PMID:19244447
xref: PMID:28840812
is_a: NCBITaxon:201174 ! Actinomycetota
relationship: RO:0002162 NCBITaxon:1760 ! Actinomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:1762
name: Mycobacteriaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:19244447
xref: PMID:41493564
is_a: NCBITaxon:85007 ! Mycobacteriales
relationship: RO:0002162 NCBITaxon:1762 ! Mycobacteriaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:1763
name: Mycobacterium
namespace: ncbi_taxonomy
synonym: "Mycobacterium Lehmann and Neumann 1896 (Approved Lists 1980)" RELATED synonym []
xref: GC_ID:11
xref: PMID:1380284
xref: PMID:1581193
xref: PMID:16014496
xref: PMID:1742195
xref: PMID:1883713
xref: PMID:2275850
xref: PMID:31296783
xref: PMID:31649146
xref: PMID:31649147
xref: PMID:34554081
xref: PMID:41226510
xref: PMID:7547284
xref: PMID:7547304
xref: PMID:7907223
xref: PMID:8863452
is_a: NCBITaxon:1762 ! Mycobacteriaceae
relationship: RO:0002162 NCBITaxon:1763 ! Mycobacterium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:1773
name: Mycobacterium tuberculosis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2528440
synonym: "Bacillus tuberculosis" RELATED synonym []
synonym: "Bacterium tuberculosis" RELATED synonym []
synonym: "Mycobacterium tuberculosis (Zopf 1883) Lehmann and Neumann 1896 (Approved Lists 1980)" RELATED synonym []
synonym: "Mycobacterium tuberculosis typus humanus" RELATED synonym []
synonym: "Mycobacterium tuberculosis var. hominis" RELATED synonym []
xref: GC_ID:11
xref: PMID:29205127
is_a: NCBITaxon:77643 ! Mycobacterium tuberculosis complex
relationship: RO:0002162 NCBITaxon:1773 ! Mycobacterium tuberculosis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:178306
name: Pyrobaculum aerophilum str. IM2
namespace: ncbi_taxonomy
synonym: "Pyrobaculum aerophilum IM2" EXACT equivalent_name []
synonym: "Pyrobaculum aerophilum strain IM2" EXACT equivalent_name []
xref: GC_ID:11
is_a: NCBITaxon:13773 ! Pyrobaculum aerophilum
relationship: RO:0002162 NCBITaxon:178306 ! Pyrobaculum aerophilum str. IM2
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:1783257
name: PVC group
namespace: ncbi_taxonomy
alt_id: NCBITaxon:51290
xref: GC_ID:11
xref: PMID:16704931
xref: PMID:23851394
xref: PMID:24185849
xref: PMID:28824586
is_a: NCBITaxon:3379134 ! Pseudomonadati
disjoint_from: NCBITaxon:1783270 ! FCB group
disjoint_from: NCBITaxon:200783 ! Aquificota
disjoint_from: NCBITaxon:200940 ! Thermodesulfobacteriota
disjoint_from: NCBITaxon:203691 ! Spirochaetota
disjoint_from: NCBITaxon:29547 ! Campylobacterota
disjoint_from: NCBITaxon:40117 ! Nitrospirota
disjoint_from: NCBITaxon:68297 ! Dictyoglomota
relationship: RO:0002162 NCBITaxon:1783257 ! PVC group
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1783270
name: FCB group
namespace: ncbi_taxonomy
alt_id: NCBITaxon:131550
synonym: "Fibrobacter/Acidobacteria group" RELATED in_part []
synonym: "Fibrobacteres-Chlorobi-Bacteroidetes superphylum" RELATED synonym []
synonym: "Fibrobacteres/Acidobacteria group" RELATED in_part []
xref: GC_ID:11
is_a: NCBITaxon:3379134 ! Pseudomonadati
disjoint_from: NCBITaxon:200783 ! Aquificota
disjoint_from: NCBITaxon:200940 ! Thermodesulfobacteriota
disjoint_from: NCBITaxon:203691 ! Spirochaetota
disjoint_from: NCBITaxon:29547 ! Campylobacterota
disjoint_from: NCBITaxon:40117 ! Nitrospirota
disjoint_from: NCBITaxon:68297 ! Dictyoglomota
relationship: RO:0002162 NCBITaxon:1783270 ! FCB group
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:1783272
name: Bacillati
namespace: ncbi_taxonomy
alt_id: NCBITaxon:31968
alt_id: NCBITaxon:3376104
synonym: "Firmacutes" RELATED synonym []
synonym: "Firmicuteota" RELATED synonym []
synonym: "Firmicutes" RELATED synonym []
synonym: "Firmicutes corrig. Gibbons and Murray 1978 (Approved Lists 1980)" RELATED synonym []
synonym: "Terrabacteria" RELATED synonym []
synonym: "Terrabacteria group" EXACT OMO:0003003 []
synonym: "Terrabacterida" RELATED synonym []
xref: GC_ID:11
xref: PMID:18988685
is_a: NCBITaxon:2 ! Bacteria
disjoint_from: NCBITaxon:3379134 ! Pseudomonadati
disjoint_from: NCBITaxon:3384189 ! Fusobacteriati
disjoint_from: NCBITaxon:3384194 ! Thermotogati
relationship: RO:0002162 NCBITaxon:1783272 ! Bacillati
property_value: has_rank NCBITaxon:kingdom
property_value: TAXRANK:1000000 TAXRANK:0000017

[Term]
id: NCBITaxon:1783275
name: Thermoproteati
namespace: ncbi_taxonomy
synonym: "Crenarchaeida" RELATED synonym []
synonym: "TACK group" EXACT OMO:0003003 []
xref: GC_ID:11
xref: PMID:23851394
is_a: NCBITaxon:2157 ! Archaea
disjoint_from: NCBITaxon:3366610 ! Methanobacteriati
relationship: RO:0002162 NCBITaxon:1783275 ! Thermoproteati
property_value: has_rank NCBITaxon:kingdom
property_value: TAXRANK:1000000 TAXRANK:0000017

[Term]
id: NCBITaxon:1798711
name: Cyanobacteriota/Melainabacteria group
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:24709563
is_a: NCBITaxon:1783272 ! Bacillati
disjoint_from: NCBITaxon:200795 ! Chloroflexota
disjoint_from: NCBITaxon:201174 ! Actinomycetota
disjoint_from: NCBITaxon:544448 ! Mycoplasmatota
relationship: RO:0002162 NCBITaxon:1798711 ! Cyanobacteriota/Melainabacteria group
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:181550
name: Trichomonadidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:37104 ! Trichomonadida
relationship: RO:0002162 NCBITaxon:181550 ! Trichomonadidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:183710
name: Deinococcaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:9103641
is_a: NCBITaxon:118964 ! Deinococcales
relationship: RO:0002162 NCBITaxon:183710 ! Deinococcaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:183924
name: Thermoprotei
namespace: ncbi_taxonomy
synonym: "Crenarchaeota" RELATED synonym []
synonym: "Thermoprotea" RELATED synonym []
xref: GC_ID:11
xref: PMID:11837318
xref: PMID:12054225
xref: PMID:25288668
xref: PMID:26654112
is_a: NCBITaxon:28889 ! Thermoproteota
disjoint_from: NCBITaxon:3342163 ! Candidatus Korarchaeia
relationship: RO:0002162 NCBITaxon:183924 ! Thermoprotei
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:183939
name: Methanococci
namespace: ncbi_taxonomy
synonym: "Methanothermea" RELATED synonym []
xref: GC_ID:11
xref: PMID:11837318
xref: PMID:12054225
is_a: NCBITaxon:2283794 ! Methanomada group
relationship: RO:0002162 NCBITaxon:183939 ! Methanococci
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:183963
name: Halobacteria
namespace: ncbi_taxonomy
synonym: "Halobacteria Grant et al. 2002" RELATED synonym []
synonym: "Halomebacteria" RELATED in_part []
xref: GC_ID:11
xref: PMID:11837318
xref: PMID:2431320
xref: PMID:25428416
xref: PMID:28857024
is_a: NCBITaxon:2290931 ! Stenosarchaea group
disjoint_from: NCBITaxon:224756 ! Methanomicrobia
relationship: RO:0002162 NCBITaxon:183963 ! Halobacteria
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:183968
name: Thermococci
namespace: ncbi_taxonomy
synonym: "Protoarchaea" RELATED synonym []
xref: GC_ID:11
xref: PMID:11837318
xref: PMID:12054225
is_a: NCBITaxon:28890 ! Methanobacteriota
disjoint_from: NCBITaxon:2283794 ! Methanomada group
disjoint_from: NCBITaxon:2290931 ! Stenosarchaea group
relationship: RO:0002162 NCBITaxon:183968 ! Thermococci
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:184922
name: Giardia lamblia ATCC 50803
namespace: ncbi_taxonomy
synonym: "Giardia intestinalis ATCC 50803" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:5741 ! Giardia duodenalis
relationship: RO:0002162 NCBITaxon:184922 ! Giardia lamblia ATCC 50803
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:185431
name: Trypanosoma brucei brucei TREU927
namespace: ncbi_taxonomy
alt_id: NCBITaxon:999953
synonym: "Trypanosoma brucei brucei strain 927/4 GUTat10.1" RELATED synonym []
synonym: "Trypanosoma brucei strain TREU927" RELATED synonym []
synonym: "Trypanosoma brucei TREU927" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:5702 ! Trypanosoma brucei brucei
relationship: RO:0002162 NCBITaxon:185431 ! Trypanosoma brucei brucei TREU927
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:186623
name: Actinopteri
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7898 ! Actinopterygii
relationship: RO:0002162 NCBITaxon:186623 ! Actinopteri
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:186625
name: Clupeocephala
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1489341 ! Osteoglossocephalai
relationship: RO:0002162 NCBITaxon:186625 ! Clupeocephala
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:186626
name: Otophysi
namespace: ncbi_taxonomy
synonym: "Otophysa" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:32519 ! Ostariophysi
relationship: RO:0002162 NCBITaxon:186626 ! Otophysi
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:186627
name: Cypriniphysae
namespace: ncbi_taxonomy
synonym: "Cypriniphysi" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:186626 ! Otophysi
relationship: RO:0002162 NCBITaxon:186627 ! Cypriniphysae
property_value: has_rank NCBITaxon:superorder
property_value: TAXRANK:1000000 TAXRANK:0000020

[Term]
id: NCBITaxon:186634
name: Otomorpha
namespace: ncbi_taxonomy
synonym: "Ostarioclupeomorpha" RELATED synonym []
synonym: "Otocephala" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:186625 ! Clupeocephala
relationship: RO:0002162 NCBITaxon:186634 ! Otomorpha
property_value: has_rank NCBITaxon:cohort
property_value: TAXRANK:1000000 TAXRANK:0001010

[Term]
id: NCBITaxon:186801
name: Clostridia
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:26410691
xref: PMID:31076745
xref: PMID:32955149
is_a: NCBITaxon:1239 ! Bacillota
disjoint_from: NCBITaxon:91061 ! Bacilli
relationship: RO:0002162 NCBITaxon:186801 ! Clostridia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:186802
name: Eubacteriales
namespace: ncbi_taxonomy
synonym: "Clostridiales" RELATED synonym []
xref: GC_ID:11
xref: PMID:24480908
is_a: NCBITaxon:186801 ! Clostridia
relationship: RO:0002162 NCBITaxon:186802 ! Eubacteriales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:186817
name: Bacillaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:1385 ! Caryophanales
disjoint_from: NCBITaxon:186820 ! Listeriaceae
disjoint_from: NCBITaxon:90964 ! Staphylococcaceae
relationship: RO:0002162 NCBITaxon:186817 ! Bacillaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:186820
name: Listeriaceae
namespace: ncbi_taxonomy
synonym: "Listeriaceae Ludwig et al. 2010" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:1385 ! Caryophanales
disjoint_from: NCBITaxon:90964 ! Staphylococcaceae
relationship: RO:0002162 NCBITaxon:186820 ! Listeriaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:186826
name: Lactobacillales
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:91061 ! Bacilli
relationship: RO:0002162 NCBITaxon:186826 ! Lactobacillales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:187857
name: Aquificia
namespace: ncbi_taxonomy
synonym: "Aquificae" RELATED synonym []
synonym: "Aquificae Reysenbach 2002" RELATED synonym []
synonym: "Aquificia corrig." RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:200783 ! Aquificota
relationship: RO:0002162 NCBITaxon:187857 ! Aquificia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:1883
name: Streptomyces
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1973
alt_id: NCBITaxon:31945
alt_id: NCBITaxon:65506
synonym: "\"Microstreptospora\" Yan et al." RELATED synonym []
synonym: "Actinopycnidium Krasil'nikov 1962" RELATED synonym []
synonym: "Actinosporangium Krasil'nikov and Yuan 1961" RELATED synonym []
synonym: "Chainia" RELATED synonym []
synonym: "Elytrosporangium Falcao de Morais et al. 1966" RELATED synonym []
synonym: "Kitasatoa Matsumae and Hata 1968 (Approved Lists 1980)" RELATED synonym []
synonym: "Microellobosporia" RELATED synonym []
synonym: "Streptoverticillium Baldacci 1958" RELATED synonym []
xref: GC_ID:11
xref: PMID:10843062
xref: PMID:11411701
xref: PMID:1371059
xref: PMID:15023980
xref: PMID:15950131
xref: PMID:39254673
xref: PMID:8590678
xref: PMID:8934906
xref: PMID:9336904
xref: PMID:9731302
is_a: NCBITaxon:2062 ! Streptomycetaceae
relationship: RO:0002162 NCBITaxon:1883 ! Streptomyces
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:1884633
name: Cryptococcaceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5234 ! Tremellales
relationship: RO:0002162 NCBITaxon:1884633 ! Cryptococcaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:188708
name: Thermotogae
namespace: ncbi_taxonomy
synonym: "Thermotogae Reysenbach 2002" RELATED synonym []
synonym: "Thermotogia" RELATED synonym []
synonym: "Togobacteria Cavalier-Smith, 2002" RELATED synonym []
xref: GC_ID:11
xref: PMID:12054225
xref: PMID:24166034
is_a: NCBITaxon:200918 ! Thermotogota
relationship: RO:0002162 NCBITaxon:188708 ! Thermotogae
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:188709
name: Thermotogaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:12054225
xref: PMID:24166034
is_a: NCBITaxon:2419 ! Thermotogales
relationship: RO:0002162 NCBITaxon:188709 ! Thermotogaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:188787
name: Deinococci
namespace: ncbi_taxonomy
synonym: "Hadobacteria" RELATED synonym []
xref: GC_ID:11
xref: PMID:11837318
xref: PMID:12054225
is_a: NCBITaxon:1297 ! Deinococcota
relationship: RO:0002162 NCBITaxon:188787 ! Deinococci
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:188937
name: Methanosarcina acetivorans C2A
namespace: ncbi_taxonomy
synonym: "Methanosarcina acetivorans str. C2A" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:11932238
is_a: NCBITaxon:2214 ! Methanosarcina acetivorans
relationship: RO:0002162 NCBITaxon:188937 ! Methanosarcina acetivorans C2A
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:1890422
name: Gloeobacteraceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:307595 ! Gloeobacterales
relationship: RO:0002162 NCBITaxon:1890422 ! Gloeobacteraceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:1890424
name: Synechococcales
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:3028117 ! Cyanophyceae
disjoint_from: NCBITaxon:307595 ! Gloeobacterales
relationship: RO:0002162 NCBITaxon:1890424 ! Synechococcales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:1890428
name: Merismopediaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:1890424 ! Synechococcales
relationship: RO:0002162 NCBITaxon:1890428 ! Merismopediaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:189518
name: Leptospira interrogans serovar Lai str. 56601
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:12712204
is_a: NCBITaxon:57678 ! Leptospira interrogans serovar Lai
relationship: RO:0002162 NCBITaxon:189518 ! Leptospira interrogans serovar Lai str. 56601
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:1897064
name: Cryptococcus neoformans species complex
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:25721988
is_a: NCBITaxon:5206 ! Cryptococcus <basidiomycete fungi>
relationship: RO:0002162 NCBITaxon:1897064 ! Cryptococcus neoformans species complex
property_value: has_rank species_group
property_value: TAXRANK:1000000 TAXRANK:0000010

[Term]
id: NCBITaxon:1902
name: Streptomyces coelicolor
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1344
alt_id: NCBITaxon:1617650
alt_id: NCBITaxon:1866229
alt_id: NCBITaxon:1866233
alt_id: NCBITaxon:1866235
alt_id: NCBITaxon:1866240
alt_id: NCBITaxon:1866241
alt_id: NCBITaxon:1866253
alt_id: NCBITaxon:1866254
alt_id: NCBITaxon:1866257
alt_id: NCBITaxon:44287
alt_id: NCBITaxon:985670
synonym: "Actinomyces coelicolor" RELATED synonym []
synonym: "Cladothrix coelicolor" RELATED synonym []
synonym: "Nocardia coelicolor" RELATED synonym []
synonym: "Streptomyces coelicolor (Muller 1908) Waksman and Henrici 1948 (Approved Lists 1980)" RELATED synonym []
synonym: "Streptomyces coelicolor subspecies coelicolor" RELATED synonym []
xref: GC_ID:11
xref: PMID:14412998
xref: PMID:19515522
xref: PMID:20068235
is_a: NCBITaxon:1477431 ! Streptomyces albidoflavus group
relationship: RO:0002162 NCBITaxon:1902 ! Streptomyces coelicolor
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:190304
name: Fusobacterium nucleatum subsp. nucleatum ATCC 25586
namespace: ncbi_taxonomy
synonym: "Fusobacterium nucleatum subsp. nucleatum JCM 8532" RELATED synonym []
synonym: "Fusobacterium nucleatum subsp. nucleatum str. ATCC 25586" EXACT equivalent_name []
synonym: "Fusobacterium nucleatum subsp. nucleatum strain ATCC 25586" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:11889109
is_a: NCBITaxon:76856 ! Fusobacterium nucleatum subsp. nucleatum
relationship: RO:0002162 NCBITaxon:190304 ! Fusobacterium nucleatum subsp. nucleatum ATCC 25586
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:1903411
name: Yersiniaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:27620848
is_a: NCBITaxon:91347 ! Enterobacterales
disjoint_from: NCBITaxon:543 ! Enterobacteriaceae
relationship: RO:0002162 NCBITaxon:1903411 ! Yersiniaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:190485
name: Xanthomonas campestris pv. campestris str. ATCC 33913
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:340 ! Xanthomonas campestris pv. campestris
relationship: RO:0002162 NCBITaxon:190485 ! Xanthomonas campestris pv. campestris str. ATCC 33913
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:1924738
name: Craspedida
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:27765632
is_a: NCBITaxon:28009 ! Choanoflagellata
relationship: RO:0002162 NCBITaxon:1924738 ! Craspedida
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:196117
name: Methanocaldococcaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:12054225
is_a: NCBITaxon:2182 ! Methanococcales
relationship: RO:0002162 NCBITaxon:196117 ! Methanocaldococcaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:196118
name: Methanocaldococcus
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:12054225
is_a: NCBITaxon:196117 ! Methanocaldococcaceae
relationship: RO:0002162 NCBITaxon:196118 ! Methanocaldococcus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:1963758
name: Myomorpha
namespace: ncbi_taxonomy
synonym: "mice and others" EXACT genbank_common_name []
synonym: "Sciurognathi" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:9989 ! Rodentia
relationship: RO:0002162 NCBITaxon:1963758 ! Myomorpha
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:197562
name: Pancrustacea
namespace: ncbi_taxonomy
alt_id: NCBITaxon:260820
alt_id: NCBITaxon:6657
synonym: "crustaceans" RELATED blast_name []
synonym: "crustaceans and hexapods" EXACT genbank_common_name []
xref: GC_ID:1
xref: PMID:10874751
xref: PMID:11557979
is_a: NCBITaxon:197563 ! Mandibulata
relationship: RO:0002162 NCBITaxon:197562 ! Pancrustacea
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:197563
name: Mandibulata
namespace: ncbi_taxonomy
synonym: "mandibulates" EXACT OMO:0003003 []
xref: GC_ID:1
xref: PMID:11557979
xref: PMID:9727836
is_a: NCBITaxon:6656 ! Arthropoda
disjoint_from: NCBITaxon:6843 ! Chelicerata
relationship: RO:0002162 NCBITaxon:197563 ! Mandibulata
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2
name: Bacteria
namespace: ncbi_taxonomy
synonym: "bacteria" EXACT genbank_common_name []
synonym: "bacteria" RELATED blast_name []
synonym: "Bacteria (ex Cavalier-Smith 1987)" RELATED synonym []
synonym: "Bacteria Woese et al. 2024" RELATED synonym []
synonym: "Bacteriobiota" RELATED synonym []
synonym: "eubacteria" EXACT OMO:0003003 []
synonym: "Monera" RELATED in_part []
synonym: "Procaryotae" RELATED in_part []
synonym: "Prokaryota" RELATED in_part []
synonym: "Prokaryotae" RELATED in_part []
synonym: "prokaryote" RELATED in_part []
synonym: "prokaryotes" RELATED in_part []
xref: GC_ID:11
xref: PMID:10425795
xref: PMID:10425796
xref: PMID:10425797
xref: PMID:10490293
xref: PMID:10843050
xref: PMID:10939651
xref: PMID:10939673
xref: PMID:10939677
xref: PMID:11211268
xref: PMID:11321083
xref: PMID:11321113
xref: PMID:11411719
xref: PMID:11540071
xref: PMID:11542017
xref: PMID:11542087
xref: PMID:11760965
xref: PMID:12054223
xref: PMID:270744
xref: PMID:32628106
xref: PMID:36748408
xref: PMID:7520741
xref: PMID:8123559
xref: PMID:8186100
xref: PMID:8590690
xref: PMID:9103655
xref: PMID:9336922
is_a: NCBITaxon:131567 ! cellular organisms
disjoint_from: NCBITaxon:2157 ! Archaea
disjoint_from: NCBITaxon:2759 ! Eukaryota
relationship: RO:0002162 NCBITaxon:2 ! Bacteria
property_value: has_rank NCBITaxon:domain
property_value: TAXRANK:1000000 TAXRANK:0000037

[Term]
id: NCBITaxon:200643
name: Bacteroidia
namespace: ncbi_taxonomy
synonym: "Bacteroidetes" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:976 ! Bacteroidota
relationship: RO:0002162 NCBITaxon:200643 ! Bacteroidia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:200783
name: Aquificota
namespace: ncbi_taxonomy
synonym: "Aquificae" RELATED synonym []
synonym: "Aquificaeota" RELATED synonym []
synonym: "Aquificota corrig. Reysenbach 2021" RELATED synonym []
xref: GC_ID:11
xref: PMID:12054225
is_a: NCBITaxon:3379134 ! Pseudomonadati
disjoint_from: NCBITaxon:200940 ! Thermodesulfobacteriota
disjoint_from: NCBITaxon:203691 ! Spirochaetota
disjoint_from: NCBITaxon:29547 ! Campylobacterota
disjoint_from: NCBITaxon:40117 ! Nitrospirota
disjoint_from: NCBITaxon:68297 ! Dictyoglomota
relationship: RO:0002162 NCBITaxon:200783 ! Aquificota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:200795
name: Chloroflexota
namespace: ncbi_taxonomy
synonym: "\"Chloroflexi\" Garrity and Holt 2001" RELATED synonym []
synonym: "Chloroflexaeota" RELATED synonym []
synonym: "Chloroflexi" EXACT equivalent_name []
synonym: "Chloroflexota corrig. Garrity and Holt 2021" RELATED synonym []
synonym: "GNS bacteria" EXACT genbank_common_name []
synonym: "GNS bacteria" RELATED blast_name []
synonym: "green non-sulfur bacteria" EXACT OMO:0003003 []
xref: GC_ID:11
xref: PMID:12054225
xref: PMID:15545432
xref: PMID:26654112
xref: PMID:29458499
xref: PMID:37894270
is_a: NCBITaxon:1783272 ! Bacillati
disjoint_from: NCBITaxon:201174 ! Actinomycetota
disjoint_from: NCBITaxon:544448 ! Mycoplasmatota
relationship: RO:0002162 NCBITaxon:200795 ! Chloroflexota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:200918
name: Thermotogota
namespace: ncbi_taxonomy
synonym: "Thermotogaeota" RELATED synonym []
synonym: "Thermotogota corrig. Reysenbach 2021" RELATED synonym []
xref: GC_ID:11
xref: PMID:12054225
xref: PMID:24166034
is_a: NCBITaxon:3384194 ! Thermotogati
relationship: RO:0002162 NCBITaxon:200918 ! Thermotogota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:200940
name: Thermodesulfobacteriota
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2904303
synonym: "Desulfobacterota" RELATED synonym []
synonym: "Thermodesulfobacteraeota" RELATED synonym []
synonym: "Thermodesulfobacteriota corrig. Garrity and Holt 2021" RELATED synonym []
xref: GC_ID:11
xref: PMID:26654112
xref: PMID:29458499
xref: PMID:33151140
is_a: NCBITaxon:3379134 ! Pseudomonadati
disjoint_from: NCBITaxon:203691 ! Spirochaetota
disjoint_from: NCBITaxon:29547 ! Campylobacterota
disjoint_from: NCBITaxon:40117 ! Nitrospirota
disjoint_from: NCBITaxon:68297 ! Dictyoglomota
relationship: RO:0002162 NCBITaxon:200940 ! Thermodesulfobacteriota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:201174
name: Actinomycetota
namespace: ncbi_taxonomy
synonym: "Actinobacteraeota" RELATED synonym []
synonym: "Actinobacteria" RELATED synonym []
synonym: "actinobacteria" EXACT genbank_common_name []
synonym: "actinobacteria" RELATED blast_name []
synonym: "Actinobacteriota" RELATED synonym []
xref: GC_ID:11
xref: PMID:11837318
xref: PMID:16280504
xref: PMID:29458499
is_a: NCBITaxon:1783272 ! Bacillati
disjoint_from: NCBITaxon:544448 ! Mycoplasmatota
relationship: RO:0002162 NCBITaxon:201174 ! Actinomycetota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:2024747
name: Dactyloidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:8511 ! Iguania
relationship: RO:0002162 NCBITaxon:2024747 ! Dactyloidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:203486
name: Dictyoglomia
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:68297 ! Dictyoglomota
relationship: RO:0002162 NCBITaxon:203486 ! Dictyoglomia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:203487
name: Dictyoglomales
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:203486 ! Dictyoglomia
relationship: RO:0002162 NCBITaxon:203487 ! Dictyoglomales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:203488
name: Dictyoglomaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:203487 ! Dictyoglomales
relationship: RO:0002162 NCBITaxon:203488 ! Dictyoglomaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:203490
name: Fusobacteriia
namespace: ncbi_taxonomy
synonym: "Fusobacteria" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:32066 ! Fusobacteriota
relationship: RO:0002162 NCBITaxon:203490 ! Fusobacteriia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:203491
name: Fusobacteriales
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:203490 ! Fusobacteriia
relationship: RO:0002162 NCBITaxon:203491 ! Fusobacteriales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:203492
name: Fusobacteriaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:203491 ! Fusobacteriales
relationship: RO:0002162 NCBITaxon:203492 ! Fusobacteriaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:203682
name: Planctomycetota
namespace: ncbi_taxonomy
synonym: "\"Planctobacteria\" (Cavalier-Smith 1987) Cavalier-Smith 2002" RELATED synonym []
synonym: "\"Planctomycetes\" Garrity and Holt 2001" RELATED synonym []
synonym: "\"Planctomycetota\" Whitman et al. 2018" RELATED synonym []
synonym: "Planctobacteria" RELATED synonym []
synonym: "Planctomycetes" EXACT equivalent_name []
synonym: "planctomycetes" RELATED blast_name []
xref: GC_ID:11
xref: PMID:15143026
xref: PMID:15280311
xref: PMID:25780503
is_a: NCBITaxon:1783257 ! PVC group
disjoint_from: NCBITaxon:204428 ! Chlamydiota
relationship: RO:0002162 NCBITaxon:203682 ! Planctomycetota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:203683
name: Planctomycetia
namespace: ncbi_taxonomy
synonym: "Planctomycea" RELATED synonym []
synonym: "Planctomycetacia" RELATED synonym []
synonym: "Planctomycetes" RELATED synonym []
synonym: "Planctomycetia Ward 2020" RELATED synonym []
xref: GC_ID:11
xref: PMID:25288668
is_a: NCBITaxon:203682 ! Planctomycetota
relationship: RO:0002162 NCBITaxon:203683 ! Planctomycetia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:203691
name: Spirochaetota
namespace: ncbi_taxonomy
synonym: "Spirochaetae" RELATED synonym []
synonym: "Spirochaetaeota" RELATED synonym []
synonym: "Spirochaetes" RELATED synonym []
xref: GC_ID:11
xref: PMID:11837318
xref: PMID:29458499
is_a: NCBITaxon:3379134 ! Pseudomonadati
disjoint_from: NCBITaxon:29547 ! Campylobacterota
disjoint_from: NCBITaxon:40117 ! Nitrospirota
disjoint_from: NCBITaxon:68297 ! Dictyoglomota
relationship: RO:0002162 NCBITaxon:203691 ! Spirochaetota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:2037
name: Actinomycetales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:85005
xref: GC_ID:11
xref: PMID:10028252
xref: PMID:16558735
xref: PMID:19244447
xref: PMID:28840812
is_a: NCBITaxon:1760 ! Actinomycetes
disjoint_from: NCBITaxon:85007 ! Mycobacteriales
disjoint_from: NCBITaxon:85011 ! Kitasatosporales
relationship: RO:0002162 NCBITaxon:2037 ! Actinomycetales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:204428
name: Chlamydiota
namespace: ncbi_taxonomy
synonym: "Chlamydaeota" RELATED synonym []
synonym: "Chlamydiae" RELATED synonym []
synonym: "Chlamydiota corrig. Garrity and Holt 2021" RELATED synonym []
xref: GC_ID:11
xref: PMID:24185849
xref: PMID:37416863
xref: PMID:39878775
is_a: NCBITaxon:1783257 ! PVC group
relationship: RO:0002162 NCBITaxon:204428 ! Chlamydiota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:204429
name: Chlamydiia
namespace: ncbi_taxonomy
synonym: "Chlamydiia (Horn 2011) emend. Gupta et al. 2016" RELATED synonym []
synonym: "Chlamydiia Horn 2016" RELATED synonym []
xref: GC_ID:11
xref: PMID:41789801
is_a: NCBITaxon:204428 ! Chlamydiota
relationship: RO:0002162 NCBITaxon:204429 ! Chlamydiia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:2058185
name: Dictyosteliaceae
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:29367151
is_a: NCBITaxon:2058949 ! Dictyosteliales
relationship: RO:0002162 NCBITaxon:2058185 ! Dictyosteliaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:2058949
name: Dictyosteliales
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:29367151
is_a: NCBITaxon:33083 ! Dictyostelia
relationship: RO:0002162 NCBITaxon:2058949 ! Dictyosteliales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2062
name: Streptomycetaceae
namespace: ncbi_taxonomy
synonym: "Actinoplanaceae" RELATED in_part []
xref: GC_ID:11
xref: PMID:19244447
xref: PMID:27902296
is_a: NCBITaxon:85011 ! Kitasatosporales
relationship: RO:0002162 NCBITaxon:2062 ! Streptomycetaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:206351
name: Neisseriales
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:23575986
is_a: NCBITaxon:28216 ! Betaproteobacteria
relationship: RO:0002162 NCBITaxon:206351 ! Neisseriales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:207245
name: Fornicata
namespace: ncbi_taxonomy
synonym: "Diplomonadida group" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:2611341 ! Metamonada
disjoint_from: NCBITaxon:5719 ! Parabasalia
relationship: RO:0002162 NCBITaxon:207245 ! Fornicata
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:207598
name: Homininae
namespace: ncbi_taxonomy
synonym: "Homo/Pan/Gorilla group" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:9604 ! Hominidae
relationship: RO:0002162 NCBITaxon:207598 ! Homininae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:208964
name: Pseudomonas aeruginosa PAO1
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1708767
synonym: "Pseudomonas sp. PAO1" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:10984043
is_a: NCBITaxon:287 ! Pseudomonas aeruginosa
relationship: RO:0002162 NCBITaxon:208964 ! Pseudomonas aeruginosa PAO1
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:209
name: Helicobacter
namespace: ncbi_taxonomy
alt_id: NCBITaxon:28203
xref: GC_ID:11
xref: PMID:11156001
xref: PMID:15143020
xref: PMID:1704793
xref: PMID:17329766
xref: PMID:29034857
is_a: NCBITaxon:72293 ! Helicobacteraceae
relationship: RO:0002162 NCBITaxon:209 ! Helicobacter
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:2097
name: Mycoplasmoides genitalium
namespace: ncbi_taxonomy
synonym: "Mycoplasma genitalium" RELATED synonym []
xref: GC_ID:4
is_a: NCBITaxon:2995234 ! Mycoplasmoides
relationship: RO:0002162 NCBITaxon:2097 ! Mycoplasmoides genitalium
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:210
name: Helicobacter pylori
namespace: ncbi_taxonomy
alt_id: NCBITaxon:219
synonym: "Campylobacter pylori" RELATED synonym []
synonym: "Campylobacter pylori subsp. pylori" RELATED synonym []
synonym: "Campylobacter pyloridis" RELATED synonym []
synonym: "Helicobacter nemestrinae" RELATED synonym []
xref: GC_ID:11
xref: PMID:11931154
xref: PMID:1995031
xref: PMID:8186097
xref: PMID:8494747
is_a: NCBITaxon:209 ! Helicobacter
relationship: RO:0002162 NCBITaxon:210 ! Helicobacter pylori
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:2100760
name: Saccharolobus
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:29485400
is_a: NCBITaxon:118883 ! Sulfolobaceae
relationship: RO:0002162 NCBITaxon:2100760 ! Saccharolobus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:211586
name: Shewanella oneidensis MR-1
namespace: ncbi_taxonomy
alt_id: NCBITaxon:60479
synonym: "Shewanella oneidensis ATCC 700550" RELATED synonym []
synonym: "Shewanella oneidensis str. MR-1" EXACT equivalent_name []
synonym: "Shewanella oneidensis strain MR-1" EXACT equivalent_name []
synonym: "Shewanella sp. MR-1" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:70863 ! Shewanella oneidensis
relationship: RO:0002162 NCBITaxon:211586 ! Shewanella oneidensis MR-1
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:213422
name: Geobacteraceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:15388715
xref: PMID:8636045
is_a: NCBITaxon:3031668 ! Geobacterales
relationship: RO:0002162 NCBITaxon:213422 ! Geobacteraceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:213849
name: Campylobacterales
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:16403855
is_a: NCBITaxon:3031852 ! Epsilonproteobacteria
relationship: RO:0002162 NCBITaxon:213849 ! Campylobacterales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:214684
name: Cryptococcus deneoformans JEC21
namespace: ncbi_taxonomy
synonym: "Cryptococcus neoformans JEC21" EXACT equivalent_name []
synonym: "Cryptococcus neoformans var. neoformans serotype D JEC21" EXACT equivalent_name []
synonym: "Cryptococcus neoformans var. neoformans strain JEC21" EXACT equivalent_name []
synonym: "Filobasidiella neoformans var. neoformans strain JEC21" EXACT equivalent_name []
xref: GC_ID:1
is_a: NCBITaxon:40410 ! Cryptococcus deneoformans
relationship: RO:0002162 NCBITaxon:214684 ! Cryptococcus deneoformans JEC21
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:214687
name: Musa acuminata subsp. malaccensis
namespace: ncbi_taxonomy
synonym: "Musa acuminata var. malaccensis" RELATED synonym []
synonym: "Musa malaccensis" RELATED synonym []
synonym: "pisang utan" EXACT OMO:0003003 []
synonym: "true apple banana" EXACT OMO:0003003 []
synonym: "wild Malaysian banana" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:4641 ! Musa acuminata
relationship: RO:0002162 NCBITaxon:214687 ! Musa acuminata subsp. malaccensis
property_value: has_rank NCBITaxon:subspecies
property_value: TAXRANK:1000000 TAXRANK:0000023

[Term]
id: NCBITaxon:214907
name: Malvoideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3629 ! Malvaceae
disjoint_from: NCBITaxon:214909 ! Byttnerioideae
relationship: RO:0002162 NCBITaxon:214907 ! Malvoideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:214909
name: Byttnerioideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3629 ! Malvaceae
relationship: RO:0002162 NCBITaxon:214909 ! Byttnerioideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:2157
name: Archaea
namespace: ncbi_taxonomy
synonym: "archaea" RELATED blast_name []
synonym: "Archaebacteria" RELATED synonym []
synonym: "Archaebiota" RELATED synonym []
synonym: "Mendosicutes" RELATED synonym []
synonym: "Metabacteria" RELATED synonym []
synonym: "Monera" RELATED in_part []
synonym: "Procaryotae" RELATED in_part []
synonym: "Prokaryota" RELATED in_part []
synonym: "Prokaryotae" RELATED in_part []
synonym: "prokaryote" RELATED in_part []
synonym: "prokaryotes" RELATED in_part []
xref: GC_ID:11
xref: PMID:10425795
xref: PMID:10425796
xref: PMID:10425797
xref: PMID:10490293
xref: PMID:10843050
xref: PMID:10939651
xref: PMID:10939673
xref: PMID:10939677
xref: PMID:11211268
xref: PMID:11321083
xref: PMID:11321113
xref: PMID:11411719
xref: PMID:11540071
xref: PMID:11541975
xref: PMID:11542064
xref: PMID:11542149
xref: PMID:11760965
xref: PMID:12054223
xref: PMID:25527841
xref: PMID:270744
xref: PMID:32628106
xref: PMID:36748408
xref: PMID:8123559
xref: PMID:8590690
xref: PMID:9103655
xref: PMID:9336922
is_a: NCBITaxon:131567 ! cellular organisms
disjoint_from: NCBITaxon:2759 ! Eukaryota
relationship: RO:0002162 NCBITaxon:2157 ! Archaea
property_value: has_rank NCBITaxon:domain
property_value: TAXRANK:1000000 TAXRANK:0000037

[Term]
id: NCBITaxon:2182
name: Methanococcales
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:11321122
xref: PMID:15653928
xref: PMID:390357
is_a: NCBITaxon:183939 ! Methanococci
relationship: RO:0002162 NCBITaxon:2182 ! Methanococcales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2190
name: Methanocaldococcus jannaschii
namespace: ncbi_taxonomy
synonym: "Methanococcus jannaschii" RELATED synonym []
xref: GC_ID:11
xref: PMID:12054225
xref: PMID:14742499
xref: PMID:18599730
is_a: NCBITaxon:196118 ! Methanocaldococcus
relationship: RO:0002162 NCBITaxon:2190 ! Methanocaldococcus jannaschii
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:219120
name: Cichorioideae
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:18375151
is_a: NCBITaxon:4210 ! Asteraceae
relationship: RO:0002162 NCBITaxon:219120 ! Cichorioideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:219121
name: Cichorieae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:102817
synonym: "Lactuceae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:219120 ! Cichorioideae
relationship: RO:0002162 NCBITaxon:219121 ! Cichorieae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:22
name: Shewanella
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:267890 ! Shewanellaceae
relationship: RO:0002162 NCBITaxon:22 ! Shewanella
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:2206
name: Methanosarcinaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:390357
xref: PMID:8590683
is_a: NCBITaxon:94695 ! Methanosarcinales
relationship: RO:0002162 NCBITaxon:2206 ! Methanosarcinaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:2207
name: Methanosarcina
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:11536640
is_a: NCBITaxon:2206 ! Methanosarcinaceae
relationship: RO:0002162 NCBITaxon:2207 ! Methanosarcina
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:22097
name: Amborellaceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:261009 ! Amborellales
relationship: RO:0002162 NCBITaxon:22097 ! Amborellaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:2214
name: Methanosarcina acetivorans
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:16346552
is_a: NCBITaxon:2207 ! Methanosarcina
relationship: RO:0002162 NCBITaxon:2214 ! Methanosarcina acetivorans
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:222544
name: Sordariomycetidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147550 ! Sordariomycetes
relationship: RO:0002162 NCBITaxon:222544 ! Sordariomycetidae
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:2231382
name: NPAAA clade
namespace: ncbi_taxonomy
synonym: "canavanine-accumulating clade" RELATED synonym []
synonym: "non-protein amino acid accumulating clade" RELATED synonym []
xref: GC_ID:1
xref: PMID:21652332
is_a: NCBITaxon:2231393 ! 50 kb inversion clade
relationship: RO:0002162 NCBITaxon:2231382 ! NPAAA clade
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2231393
name: 50 kb inversion clade
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3814 ! Papilionoideae
relationship: RO:0002162 NCBITaxon:2231393 ! 50 kb inversion clade
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2233838
name: Hologalegina
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2231382 ! NPAAA clade
disjoint_from: NCBITaxon:2233855 ! indigoferoid/millettioid clade
relationship: RO:0002162 NCBITaxon:2233838 ! Hologalegina
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2233839
name: IRL clade
namespace: ncbi_taxonomy
synonym: "inverted repeat lacking clade" RELATED synonym []
synonym: "inverted repeat loss clade" RELATED synonym []
synonym: "temperate herbaceous clade" RELATED synonym []
xref: GC_ID:1
xref: PMID:21652332
is_a: NCBITaxon:2233838 ! Hologalegina
relationship: RO:0002162 NCBITaxon:2233839 ! IRL clade
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2233855
name: indigoferoid/millettioid clade
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:10719003
xref: PMID:21652332
is_a: NCBITaxon:2231382 ! NPAAA clade
relationship: RO:0002162 NCBITaxon:2233855 ! indigoferoid/millettioid clade
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2235
name: Halobacteriales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1644055
alt_id: NCBITaxon:1644060
synonym: "Haloarchaeales" RELATED synonym []
synonym: "Haloferacales" RELATED synonym []
synonym: "Natrialbales" RELATED synonym []
xref: GC_ID:11
xref: PMID:11321122
xref: PMID:15653928
xref: PMID:16738095
xref: PMID:18485204
xref: PMID:18768637
xref: PMID:21296924
xref: PMID:37486319
is_a: NCBITaxon:183963 ! Halobacteria
relationship: RO:0002162 NCBITaxon:2235 ! Halobacteriales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2236
name: Halobacteriaceae
namespace: ncbi_taxonomy
synonym: "Haloarchaeaceae" RELATED synonym []
xref: GC_ID:11
xref: PMID:10843089
xref: PMID:17911299
xref: PMID:18485204
xref: PMID:18768637
xref: PMID:19946058
xref: PMID:21378133
xref: PMID:22155757
xref: PMID:25428416
is_a: NCBITaxon:2235 ! Halobacteriales
relationship: RO:0002162 NCBITaxon:2236 ! Halobacteriaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:2239
name: Halobacterium
namespace: ncbi_taxonomy
synonym: "Flavobacterium (subgen. Halobacterium)" RELATED synonym []
synonym: "Haloarchaeum" RELATED synonym []
synonym: "Halobacter" RELATED synonym []
xref: GC_ID:11
xref: PMID:15653928
xref: PMID:18485204
xref: PMID:18768637
xref: PMID:19244452
is_a: NCBITaxon:2236 ! Halobacteriaceae
relationship: RO:0002162 NCBITaxon:2239 ! Halobacterium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:2242
name: Halobacterium salinarum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2240
alt_id: NCBITaxon:2241
alt_id: NCBITaxon:413968
alt_id: NCBITaxon:888097
synonym: "Bacillus halobius ruber" RELATED synonym []
synonym: "Bacterium halobium" RELATED synonym []
synonym: "Flavobacterium (subgen. Halobacterium) halobium" RELATED synonym []
synonym: "Flavobacterium (subgen. Halobacterium) salinarium" RELATED synonym []
synonym: "Halobacter salinaria" RELATED synonym []
synonym: "Halobacterium cutirubrum" RELATED synonym []
synonym: "Halobacterium halobium" RELATED synonym []
synonym: "Halobacterium piscisalsi" RELATED synonym []
synonym: "Halobacterium salinarium" RELATED synonym []
synonym: "Pseudomonas salinaria" RELATED synonym []
synonym: "Serratia cutirubrum" RELATED synonym []
synonym: "Serratia salinaria" RELATED synonym []
xref: GC_ID:11
xref: PMID:15290323
xref: PMID:16014457
xref: PMID:18768619
xref: PMID:22058320
xref: PMID:31296677
is_a: NCBITaxon:2239 ! Halobacterium
relationship: RO:0002162 NCBITaxon:2242 ! Halobacterium salinarum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:224308
name: Bacillus subtilis subsp. subtilis str. 168
namespace: ncbi_taxonomy
alt_id: NCBITaxon:535027
synonym: "Bacillus subtilis 168" RELATED synonym []
synonym: "Bacillus subtilis subsp. subtilis 168" RELATED synonym []
synonym: "Bacillus subtilis subsp. subtilis str. BGSC 1A700" RELATED synonym []
xref: GC_ID:11
xref: PMID:9384377
is_a: NCBITaxon:135461 ! Bacillus subtilis subsp. subtilis
relationship: RO:0002162 NCBITaxon:224308 ! Bacillus subtilis subsp. subtilis str. 168
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:224324
name: Aquifex aeolicus VF5
namespace: ncbi_taxonomy
synonym: "Aquifex aeolicus str. VF5" RELATED synonym []
xref: GC_ID:11
xref: PMID:9537320
is_a: NCBITaxon:63363 ! Aquifex aeolicus
relationship: RO:0002162 NCBITaxon:224324 ! Aquifex aeolicus VF5
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:224756
name: Methanomicrobia
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:2290931 ! Stenosarchaea group
relationship: RO:0002162 NCBITaxon:224756 ! Methanomicrobia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:224911
name: Bradyrhizobium diazoefficiens USDA 110
namespace: ncbi_taxonomy
synonym: "Bradyrhizobium japonicum USDA 110" RELATED synonym []
xref: GC_ID:11
xref: PMID:12597275
xref: PMID:12597279
is_a: NCBITaxon:1355477 ! Bradyrhizobium diazoefficiens
relationship: RO:0002162 NCBITaxon:224911 ! Bradyrhizobium diazoefficiens USDA 110
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:2258
name: Thermococcales
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:11321122
xref: PMID:15653928
is_a: NCBITaxon:183968 ! Thermococci
relationship: RO:0002162 NCBITaxon:2258 ! Thermococcales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2259
name: Thermococcaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:2258 ! Thermococcales
relationship: RO:0002162 NCBITaxon:2259 ! Thermococcaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:226186
name: Bacteroides thetaiotaomicron VPI-5482
namespace: ncbi_taxonomy
synonym: "Bacteroides thetaiotaomicron str. VPI-5482" EXACT equivalent_name []
synonym: "Bacteroides thetaiotaomicron strain VPI-5482" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:12663928
is_a: NCBITaxon:818 ! Bacteroides thetaiotaomicron
relationship: RO:0002162 NCBITaxon:226186 ! Bacteroides thetaiotaomicron VPI-5482
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:2263
name: Thermococcus
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:15653928
is_a: NCBITaxon:2259 ! Thermococcaceae
relationship: RO:0002162 NCBITaxon:2263 ! Thermococcus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:2266
name: Thermoproteales
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:15653928
xref: PMID:6791033
xref: PMID:9226896
is_a: NCBITaxon:183924 ! Thermoprotei
disjoint_from: NCBITaxon:2281 ! Sulfolobales
relationship: RO:0002162 NCBITaxon:2266 ! Thermoproteales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2267
name: Thermoproteaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:9226896
is_a: NCBITaxon:2266 ! Thermoproteales
relationship: RO:0002162 NCBITaxon:2267 ! Thermoproteaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:226900
name: Bacillus cereus ATCC 14579
namespace: ncbi_taxonomy
synonym: "Bacillus cereus (strain ATCC 14579 / DSM 31)" RELATED synonym []
xref: GC_ID:11
xref: PMID:12721630
is_a: NCBITaxon:1396 ! Bacillus cereus
relationship: RO:0002162 NCBITaxon:226900 ! Bacillus cereus ATCC 14579
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:227321
name: Aspergillus nidulans FGSC A4
namespace: ncbi_taxonomy
synonym: "Emericella nidulans FGSC A4" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:162425 ! Aspergillus nidulans
relationship: RO:0002162 NCBITaxon:227321 ! Aspergillus nidulans FGSC A4
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:227377
name: Coxiella burnetii RSA 493
namespace: ncbi_taxonomy
synonym: "Coxiella burnetii str. RSA 493" RELATED synonym []
xref: GC_ID:11
xref: PMID:12704232
is_a: NCBITaxon:777 ! Coxiella burnetii
relationship: RO:0002162 NCBITaxon:227377 ! Coxiella burnetii RSA 493
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:2276
name: Pyrobaculum
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:22561593
is_a: NCBITaxon:2267 ! Thermoproteaceae
relationship: RO:0002162 NCBITaxon:2276 ! Pyrobaculum
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:2281
name: Sulfolobales
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:11321122
xref: PMID:15653928
is_a: NCBITaxon:183924 ! Thermoprotei
relationship: RO:0002162 NCBITaxon:2281 ! Sulfolobales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2283794
name: Methanomada group
namespace: ncbi_taxonomy
synonym: "Methanogen Class I" RELATED synonym []
synonym: "Methanomada" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:25660375
is_a: NCBITaxon:28890 ! Methanobacteriota
disjoint_from: NCBITaxon:2290931 ! Stenosarchaea group
relationship: RO:0002162 NCBITaxon:2283794 ! Methanomada group
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2287
name: Saccharolobus solfataricus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:44290
synonym: "Sulfolobus solfataricus" RELATED synonym []
xref: GC_ID:11
xref: PMID:29485400
is_a: NCBITaxon:2100760 ! Saccharolobus
relationship: RO:0002162 NCBITaxon:2287 ! Saccharolobus solfataricus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:2290931
name: Stenosarchaea group
namespace: ncbi_taxonomy
synonym: "Stenosarchaea" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:29684598
is_a: NCBITaxon:28890 ! Methanobacteriota
relationship: RO:0002162 NCBITaxon:2290931 ! Stenosarchaea group
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2301094
name: Diplogasteroidea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:50827 ! Diplogasteromorpha
relationship: RO:0002162 NCBITaxon:2301094 ! Diplogasteroidea
property_value: has_rank NCBITaxon:superfamily
property_value: TAXRANK:1000000 TAXRANK:0000018

[Term]
id: NCBITaxon:2301116
name: Rhabditina
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6236 ! Rhabditida
relationship: RO:0002162 NCBITaxon:2301116 ! Rhabditina
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:2301119
name: Rhabditomorpha
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2301116 ! Rhabditina
disjoint_from: NCBITaxon:50827 ! Diplogasteromorpha
relationship: RO:0002162 NCBITaxon:2301119 ! Rhabditomorpha
property_value: has_rank NCBITaxon:infraorder
property_value: TAXRANK:1000000 TAXRANK:0000013

[Term]
id: NCBITaxon:2304100
name: Viteae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3602 ! Vitaceae
relationship: RO:0002162 NCBITaxon:2304100 ! Viteae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:232378
name: Proteales
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:26724406
is_a: NCBITaxon:1437183 ! Mesangiospermae
disjoint_from: NCBITaxon:4447 ! Liliopsida
disjoint_from: NCBITaxon:71240 ! eudicotyledons
relationship: RO:0002162 NCBITaxon:232378 ! Proteales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2335
name: Thermotoga
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:24166034
is_a: NCBITaxon:188709 ! Thermotogaceae
relationship: RO:0002162 NCBITaxon:2335 ! Thermotoga
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:2336
name: Thermotoga maritima
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:11542087
is_a: NCBITaxon:2335 ! Thermotoga
relationship: RO:0002162 NCBITaxon:2336 ! Thermotoga maritima
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:23513
name: Rutaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:43704
synonym: "rue family" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:41937 ! Sapindales
relationship: RO:0002162 NCBITaxon:23513 ! Rutaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:235629
name: Acalyphoideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3977 ! Euphorbiaceae
disjoint_from: NCBITaxon:235631 ! Crotonoideae
relationship: RO:0002162 NCBITaxon:235629 ! Acalyphoideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:235631
name: Crotonoideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3977 ! Euphorbiaceae
relationship: RO:0002162 NCBITaxon:235631 ! Crotonoideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:235880
name: Acalypheae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:235629 ! Acalyphoideae
relationship: RO:0002162 NCBITaxon:235880 ! Acalypheae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:235883
name: Manihoteae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:235631 ! Crotonoideae
relationship: RO:0002162 NCBITaxon:235883 ! Manihoteae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:237561
name: Candida albicans SC5314
namespace: ncbi_taxonomy
xref: GC_ID:12
is_a: NCBITaxon:5476 ! Candida albicans
relationship: RO:0002162 NCBITaxon:237561 ! Candida albicans SC5314
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:238069
name: Saliceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3688 ! Salicaceae
relationship: RO:0002162 NCBITaxon:238069 ! Saliceae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:241407
name: Saccharomycetales incertae sedis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:118267
xref: GC_ID:1
is_a: NCBITaxon:4892 ! Saccharomycetales
disjoint_from: NCBITaxon:4893 ! Saccharomycetaceae
relationship: RO:0002162 NCBITaxon:241407 ! Saccharomycetales incertae sedis

[Term]
id: NCBITaxon:2419
name: Thermotogales
namespace: ncbi_taxonomy
synonym: "thermotogales" RELATED blast_name []
xref: GC_ID:11
xref: PMID:12054225
xref: PMID:24166034
is_a: NCBITaxon:188708 ! Thermotogae
relationship: RO:0002162 NCBITaxon:2419 ! Thermotogales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:243090
name: Rhodopirellula baltica SH 1
namespace: ncbi_taxonomy
synonym: "Pirellula sp. 1" RELATED synonym []
synonym: "Rhodopirellula baltica str. SH 1" RELATED synonym []
synonym: "Rhodopirellula baltica strain SH 1" RELATED synonym []
xref: GC_ID:11
xref: PMID:12835416
xref: PMID:15388712
is_a: NCBITaxon:265606 ! Rhodopirellula baltica
relationship: RO:0002162 NCBITaxon:243090 ! Rhodopirellula baltica SH 1
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:243230
name: Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1121384
alt_id: NCBITaxon:1408434
synonym: "Deinococcus radiodurans ATCC 13939" EXACT equivalent_name []
synonym: "Deinococcus radiodurans DSM 20539" EXACT equivalent_name []
synonym: "Deinococcus radiodurans R1" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:10567266
is_a: NCBITaxon:1299 ! Deinococcus radiodurans
relationship: RO:0002162 NCBITaxon:243230 ! Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:243231
name: Geobacter sulfurreducens PCA
namespace: ncbi_taxonomy
synonym: "Geobacter sulfurreducens str. PCA" EXACT equivalent_name []
synonym: "Geobacter sulfurreducens strain PCA" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:14671304
is_a: NCBITaxon:35554 ! Geobacter sulfurreducens
relationship: RO:0002162 NCBITaxon:243231 ! Geobacter sulfurreducens PCA
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:243232
name: Methanocaldococcus jannaschii DSM 2661
namespace: ncbi_taxonomy
synonym: "Methanocaldococcus jannaschii str. DSM 2661" EXACT equivalent_name []
synonym: "Methanococcus jannaschii DSM 2661" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:2190 ! Methanocaldococcus jannaschii
relationship: RO:0002162 NCBITaxon:243232 ! Methanocaldococcus jannaschii DSM 2661
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:243273
name: Mycoplasmoides genitalium G37
namespace: ncbi_taxonomy
synonym: "Mycoplasma genitalium ATCC 33530" RELATED synonym []
synonym: "Mycoplasma genitalium G37" RELATED synonym []
synonym: "Mycoplasma genitalium str. G37" EXACT equivalent_name []
synonym: "Mycoplasma genitalium strain G37" EXACT equivalent_name []
xref: GC_ID:4
is_a: NCBITaxon:2097 ! Mycoplasmoides genitalium
relationship: RO:0002162 NCBITaxon:243273 ! Mycoplasmoides genitalium G37
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:243274
name: Thermotoga maritima MSB8
namespace: ncbi_taxonomy
synonym: "Thermotoga maritima DSM 3109" RELATED synonym []
synonym: "Thermotoga maritima str. MSB8" EXACT equivalent_name []
synonym: "Thermotoga maritima strain MSB8" EXACT equivalent_name []
xref: GC_ID:11
is_a: NCBITaxon:2336 ! Thermotoga maritima
relationship: RO:0002162 NCBITaxon:243274 ! Thermotoga maritima MSB8
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:243277
name: Vibrio cholerae O1 biovar El Tor str. N16961
namespace: ncbi_taxonomy
synonym: "Vibrio cholerae El Tor N16961" EXACT equivalent_name []
synonym: "Vibrio cholerae O1 biovar eltor str. N16961" RELATED synonym []
synonym: "Vibrio cholerae serotype O1 biotype El Tor strain N16961" EXACT equivalent_name []
synonym: "Vibrio cholerae serotype O1 biotype ElTor strain N16961" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:10952301
is_a: NCBITaxon:686 ! Vibrio cholerae O1 biovar El Tor
relationship: RO:0002162 NCBITaxon:243277 ! Vibrio cholerae O1 biovar El Tor str. N16961
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:2493110
name: Trichoplacidae
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:30063702
is_a: NCBITaxon:3043702 ! Trichoplacea
relationship: RO:0002162 NCBITaxon:2493110 ! Trichoplacidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:251221
name: Gloeobacter violaceus PCC 7421
namespace: ncbi_taxonomy
synonym: "Gloeobacter violaceus ATCC 29082" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:14621292
is_a: NCBITaxon:33072 ! Gloeobacter violaceus
relationship: RO:0002162 NCBITaxon:251221 ! Gloeobacter violaceus PCC 7421
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:2605435
name: Evosea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:554915 ! Amoebozoa
relationship: RO:0002162 NCBITaxon:2605435 ! Evosea
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:261009
name: Amborellales
namespace: ncbi_taxonomy
synonym: "ANA grade angiosperms" RELATED in_part []
synonym: "ANITA grade angiosperms" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:3398 ! Magnoliopsida
relationship: RO:0002162 NCBITaxon:261009 ! Amborellales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2611341
name: Metamonada
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:30257078
is_a: NCBITaxon:2759 ! Eukaryota
disjoint_from: NCBITaxon:2611352 ! Discoba
disjoint_from: NCBITaxon:2698737 ! Sar
disjoint_from: NCBITaxon:3027 ! Cryptophyceae
disjoint_from: NCBITaxon:33090 ! Viridiplantae
disjoint_from: NCBITaxon:33154 ! Opisthokonta
disjoint_from: NCBITaxon:38254 ! Glaucocystophyceae
disjoint_from: NCBITaxon:554915 ! Amoebozoa
relationship: RO:0002162 NCBITaxon:2611341 ! Metamonada
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2611352
name: Discoba
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2759 ! Eukaryota
disjoint_from: NCBITaxon:2698737 ! Sar
disjoint_from: NCBITaxon:3027 ! Cryptophyceae
disjoint_from: NCBITaxon:33090 ! Viridiplantae
disjoint_from: NCBITaxon:33154 ! Opisthokonta
disjoint_from: NCBITaxon:38254 ! Glaucocystophyceae
disjoint_from: NCBITaxon:554915 ! Amoebozoa
relationship: RO:0002162 NCBITaxon:2611352 ! Discoba
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2640012
name: unclassified Synechocystis
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:1142 ! Synechocystis
relationship: RO:0002162 NCBITaxon:2640012 ! unclassified Synechocystis

[Term]
id: NCBITaxon:2653789
name: Whippomorpha
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:91561 ! Artiodactyla
disjoint_from: NCBITaxon:35497 ! Suina
disjoint_from: NCBITaxon:9845 ! Ruminantia
relationship: RO:0002162 NCBITaxon:2653789 ! Whippomorpha
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:265488
name: Rhodopirellula
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:15388712
xref: PMID:24631661
is_a: NCBITaxon:2691357 ! Pirellulaceae
relationship: RO:0002162 NCBITaxon:265488 ! Rhodopirellula
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:265606
name: Rhodopirellula baltica
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:15388712
is_a: NCBITaxon:265488 ! Rhodopirellula
relationship: RO:0002162 NCBITaxon:265606 ! Rhodopirellula baltica
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:267890
name: Shewanellaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:135622 ! Alteromonadales
relationship: RO:0002162 NCBITaxon:267890 ! Shewanellaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:2682482
name: Mastigamoebida
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:555406 ! Archamoebae
relationship: RO:0002162 NCBITaxon:2682482 ! Mastigamoebida
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2682552
name: Leptocardii
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7735 ! Cephalochordata
relationship: RO:0002162 NCBITaxon:2682552 ! Leptocardii
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:2682553
name: Amphioxiformes
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2682552 ! Leptocardii
relationship: RO:0002162 NCBITaxon:2682553 ! Amphioxiformes
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2684882
name: Zygnematophycidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:131209 ! Zygnematophyceae
relationship: RO:0002162 NCBITaxon:2684882 ! Zygnematophycidae
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:2691354
name: Pirellulales
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:203683 ! Planctomycetia
relationship: RO:0002162 NCBITaxon:2691354 ! Pirellulales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2691357
name: Pirellulaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:2691354 ! Pirellulales
relationship: RO:0002162 NCBITaxon:2691357 ! Pirellulaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:2692248
name: core chlorophytes
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3041 ! Chlorophyta
relationship: RO:0002162 NCBITaxon:2692248 ! core chlorophytes
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2696291
name: Ochrophyta
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2686031
xref: GC_ID:1
is_a: NCBITaxon:33634 ! Stramenopiles
disjoint_from: NCBITaxon:4762 ! Oomycota
relationship: RO:0002162 NCBITaxon:2696291 ! Ochrophyta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2697495
name: Spiralia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33317 ! Protostomia
relationship: RO:0002162 NCBITaxon:2697495 ! Spiralia
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2698737
name: Sar
namespace: ncbi_taxonomy
synonym: "SAR supergroup" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:2759 ! Eukaryota
disjoint_from: NCBITaxon:3027 ! Cryptophyceae
disjoint_from: NCBITaxon:33090 ! Viridiplantae
disjoint_from: NCBITaxon:33154 ! Opisthokonta
disjoint_from: NCBITaxon:38254 ! Glaucocystophyceae
disjoint_from: NCBITaxon:554915 ! Amoebozoa
relationship: RO:0002162 NCBITaxon:2698737 ! Sar
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:2704647
name: Metakinetoplastina
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5653 ! Kinetoplastea
relationship: RO:0002162 NCBITaxon:2704647 ! Metakinetoplastina
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:2704949
name: Trypanosomatida
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2704647 ! Metakinetoplastina
relationship: RO:0002162 NCBITaxon:2704949 ! Trypanosomatida
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2706
name: Citrus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:170990
alt_id: NCBITaxon:206423
alt_id: NCBITaxon:3448004
alt_id: NCBITaxon:37881
alt_id: NCBITaxon:76962
alt_id: NCBITaxon:76965
synonym: "Citrus x Poncirus" RELATED synonym []
synonym: "Eremocitrus" RELATED synonym []
synonym: "Fortunella" RELATED synonym []
synonym: "Microcitrus" RELATED synonym []
synonym: "Poncirus" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1728959 ! Aurantioideae
relationship: RO:0002162 NCBITaxon:2706 ! Citrus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:2711
name: Citrus sinensis
namespace: ncbi_taxonomy
synonym: "apfelsine" EXACT OMO:0003003 []
synonym: "Citrus maxima x Citrus reticulata" EXACT equivalent_name []
synonym: "Citrus x sinensis" EXACT equivalent_name []
synonym: "naranja" EXACT OMO:0003003 []
synonym: "navel orange" EXACT OMO:0003003 []
synonym: "sweet orange" EXACT genbank_common_name []
synonym: "Valencia orange" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:2706 ! Citrus
relationship: RO:0002162 NCBITaxon:2711 ! Citrus sinensis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:2713
name: Aquifex
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:64898 ! Aquificaceae
relationship: RO:0002162 NCBITaxon:2713 ! Aquifex
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:2720870
name: Nidulantes
namespace: ncbi_taxonomy
synonym: "Aspergillus subgen. Nidulantes" RELATED synonym []
xref: GC_ID:1
xref: PMID:28082760
is_a: NCBITaxon:5052 ! Aspergillus <genus>
disjoint_from: NCBITaxon:2720872 ! Fumigati
relationship: RO:0002162 NCBITaxon:2720870 ! Nidulantes
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:2720872
name: Fumigati
namespace: ncbi_taxonomy
synonym: "Aspergillus subgen. Fumigati" RELATED synonym []
xref: GC_ID:1
xref: PMID:28082760
is_a: NCBITaxon:5052 ! Aspergillus <genus>
relationship: RO:0002162 NCBITaxon:2720872 ! Fumigati
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:27254
name: Zosteraceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:16360 ! Alismatales
relationship: RO:0002162 NCBITaxon:27254 ! Zosteraceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:272561
name: Chlamydia trachomatis D/UW-3/CX
namespace: ncbi_taxonomy
synonym: "Chlamydia trachomatis str. D/UW-3/CX" EXACT equivalent_name []
synonym: "Chlamydia trachomatis strain D/UW-3/CX" EXACT equivalent_name []
xref: GC_ID:11
is_a: NCBITaxon:813 ! Chlamydia trachomatis
relationship: RO:0002162 NCBITaxon:272561 ! Chlamydia trachomatis D/UW-3/CX
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:27257
name: Zostera
namespace: ncbi_taxonomy
alt_id: NCBITaxon:55461
synonym: "Heterozostera" RELATED synonym []
xref: GC_ID:1
xref: PMID:18006507
is_a: NCBITaxon:27254 ! Zosteraceae
relationship: RO:0002162 NCBITaxon:27257 ! Zostera
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:273057
name: Saccharolobus solfataricus P2
namespace: ncbi_taxonomy
synonym: "Sulfolobus solfataricus P2" RELATED synonym []
xref: GC_ID:11
xref: PMID:11427726
is_a: NCBITaxon:2287 ! Saccharolobus solfataricus
relationship: RO:0002162 NCBITaxon:273057 ! Saccharolobus solfataricus P2
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:2743709
name: Danionidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:30727 ! Cyprinoidei
relationship: RO:0002162 NCBITaxon:2743709 ! Danionidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:2743711
name: Danioninae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2743709 ! Danionidae
relationship: RO:0002162 NCBITaxon:2743711 ! Danioninae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:2759
name: Eukaryota
namespace: ncbi_taxonomy
synonym: "Eucarya" RELATED synonym []
synonym: "Eucaryotae" RELATED synonym []
synonym: "Eukarya" RELATED synonym []
synonym: "Eukaryotae" RELATED synonym []
synonym: "eukaryotes" EXACT genbank_common_name []
synonym: "eukaryotes" RELATED blast_name []
xref: GC_ID:1
xref: PMID:23020233
xref: PMID:30257078
is_a: NCBITaxon:131567 ! cellular organisms
relationship: RO:0002162 NCBITaxon:2759 ! Eukaryota
property_value: has_rank NCBITaxon:domain
property_value: TAXRANK:1000000 TAXRANK:0000037

[Term]
id: NCBITaxon:27592
name: Bovinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9895 ! Bovidae
relationship: RO:0002162 NCBITaxon:27592 ! Bovinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:2785018
name: Camarodonta
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7674 ! Echinacea <sea urchins>
relationship: RO:0002162 NCBITaxon:2785018 ! Camarodonta
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:27896
name: Planariidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1292248 ! Planarioidea
relationship: RO:0002162 NCBITaxon:27896 ! Planariidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:2790996
name: Mycoplasmoidales
namespace: ncbi_taxonomy
xref: GC_ID:4
xref: PMID:31385780
xref: PMID:31971499
xref: PMID:35947640
is_a: NCBITaxon:544448 ! Mycoplasmatota
relationship: RO:0002162 NCBITaxon:2790996 ! Mycoplasmoidales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2790998
name: Mycoplasmoidaceae
namespace: ncbi_taxonomy
xref: GC_ID:4
xref: PMID:31385780
xref: PMID:31971499
xref: PMID:35947640
is_a: NCBITaxon:2790996 ! Mycoplasmoidales
relationship: RO:0002162 NCBITaxon:2790998 ! Mycoplasmoidaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:28009
name: Choanoflagellata
namespace: ncbi_taxonomy
synonym: "Choanoflagellatea" RELATED synonym []
synonym: "choanoflagellates" EXACT genbank_common_name []
synonym: "choanoflagellates" RELATED blast_name []
synonym: "Choanoflagellida" RELATED synonym []
synonym: "Choanomonada" RELATED synonym []
synonym: "Choanozoa" RELATED synonym []
xref: GC_ID:1
xref: PMID:27765632
is_a: NCBITaxon:33154 ! Opisthokonta
disjoint_from: NCBITaxon:33208 ! Metazoa
disjoint_from: NCBITaxon:4751 ! Fungi
relationship: RO:0002162 NCBITaxon:28009 ! Choanoflagellata
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:2811502
name: Thermodesulfovibrionia
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:40117 ! Nitrospirota
relationship: RO:0002162 NCBITaxon:2811502 ! Thermodesulfovibrionia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:2811503
name: Thermodesulfovibrionales
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:2811502 ! Thermodesulfovibrionia
relationship: RO:0002162 NCBITaxon:2811503 ! Thermodesulfovibrionales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:2811504
name: Thermodesulfovibrionaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:2811503 ! Thermodesulfovibrionales
relationship: RO:0002162 NCBITaxon:2811504 ! Thermodesulfovibrionaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:2812636
name: CS clade
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3166 ! Chlorophyceae
relationship: RO:0002162 NCBITaxon:2812636 ! CS clade
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:28211
name: Alphaproteobacteria
namespace: ncbi_taxonomy
synonym: "a-proteobacteria" EXACT genbank_common_name []
synonym: "a-proteobacteria" RELATED blast_name []
synonym: "alpha proteobacteria" RELATED synonym []
synonym: "alpha subdivision" RELATED synonym []
synonym: "alpha subgroup" RELATED synonym []
synonym: "Alphabacteria" RELATED synonym []
synonym: "Proteobacteria alpha subdivision" RELATED synonym []
synonym: "Purple bacteria, alpha subdivision" RELATED synonym []
xref: GC_ID:11
xref: PMID:11541974
xref: PMID:11837318
xref: PMID:16166687
xref: PMID:16403855
xref: PMID:19060069
is_a: NCBITaxon:1224 ! Pseudomonadota
disjoint_from: NCBITaxon:28216 ! Betaproteobacteria
relationship: RO:0002162 NCBITaxon:28211 ! Alphaproteobacteria
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:28216
name: Betaproteobacteria
namespace: ncbi_taxonomy
synonym: "b-proteobacteria" EXACT genbank_common_name []
synonym: "b-proteobacteria" RELATED blast_name []
synonym: "beta proteobacteria" RELATED synonym []
synonym: "beta subdivision" RELATED synonym []
synonym: "beta subgroup" RELATED synonym []
synonym: "Proteobacteria beta subdivision" RELATED synonym []
synonym: "Purple bacteria, beta subdivision" RELATED synonym []
xref: GC_ID:11
xref: PMID:16403855
xref: PMID:28581923
is_a: NCBITaxon:1224 ! Pseudomonadota
relationship: RO:0002162 NCBITaxon:28216 ! Betaproteobacteria
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:2822797
name: Stipodae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147368 ! Pooideae
relationship: RO:0002162 NCBITaxon:2822797 ! Stipodae

[Term]
id: NCBITaxon:28231
name: Geobacter
namespace: ncbi_taxonomy
synonym: "Geobacter Lovley et al. 1995" RELATED synonym []
xref: GC_ID:11
xref: PMID:17329769
is_a: NCBITaxon:213422 ! Geobacteraceae
relationship: RO:0002162 NCBITaxon:28231 ! Geobacter
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:28261
name: Thermodesulfovibrio
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:2811504 ! Thermodesulfovibrionaceae
relationship: RO:0002162 NCBITaxon:28261 ! Thermodesulfovibrio
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:28262
name: Thermodesulfovibrio yellowstonii
namespace: ncbi_taxonomy
alt_id: NCBITaxon:53423
alt_id: NCBITaxon:86167
alt_id: NCBITaxon:86168
synonym: "Thermodesulfovibrio islandicus" RELATED synonym []
synonym: "Thermodesulfovibrio yellowstonensis" EXACT equivalent_name []
synonym: "Thermodesulfurivibrio yellowstonensis" EXACT equivalent_name []
synonym: "Thermodesulfurivibrio yellowstonii" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:19666800
xref: PMID:39551005
xref: PMID:40742387
xref: PMID:8897428
is_a: NCBITaxon:28261 ! Thermodesulfovibrio
relationship: RO:0002162 NCBITaxon:28262 ! Thermodesulfovibrio yellowstonii
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:2836
name: Bacillariophyta
namespace: ncbi_taxonomy
synonym: "algae" RELATED in_part []
synonym: "bacillariophytes" EXACT OMO:0003003 []
synonym: "Diatomea" RELATED synonym []
synonym: "Diatomeae" RELATED synonym []
synonym: "Diatomophyceae" RELATED synonym []
synonym: "diatoms" EXACT genbank_common_name []
synonym: "diatoms" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:2696291 ! Ochrophyta
relationship: RO:0002162 NCBITaxon:2836 ! Bacillariophyta
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:28376
name: Anolis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:323564
alt_id: NCBITaxon:75277
xref: GC_ID:1
is_a: NCBITaxon:2024747 ! Dactyloidae
relationship: RO:0002162 NCBITaxon:28376 ! Anolis
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:28377
name: Anolis carolinensis
namespace: ncbi_taxonomy
synonym: "Carolina anole" EXACT OMO:0003003 []
synonym: "green anole" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:28376 ! Anolis
relationship: RO:0002162 NCBITaxon:28377 ! Anolis carolinensis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:284591
name: Yarrowia lipolytica CLIB122
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:15229592
is_a: NCBITaxon:4952 ! Yarrowia lipolytica
relationship: RO:0002162 NCBITaxon:284591 ! Yarrowia lipolytica CLIB122
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:284811
name: Eremothecium gossypii ATCC 10895
namespace: ncbi_taxonomy
synonym: "Ashbya gossypii ATCC 10895" RELATED synonym []
xref: GC_ID:1
xref: PMID:12748053
xref: PMID:7662294
xref: PMID:9271109
is_a: NCBITaxon:33169 ! Eremothecium gossypii
relationship: RO:0002162 NCBITaxon:284811 ! Eremothecium gossypii ATCC 10895
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:284812
name: Schizosaccharomyces pombe 972h-
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4896 ! Schizosaccharomyces pombe
relationship: RO:0002162 NCBITaxon:284812 ! Schizosaccharomyces pombe 972h-
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:286
name: Pseudomonas
namespace: ncbi_taxonomy
alt_id: NCBITaxon:212745
synonym: "\"Chlorobacterium\" Guillebeau 1890, nom. rejic. Opin. 6 (not \"Chlorobacterium\" Lauterborn 1916)" RELATED synonym []
synonym: "Chryseomonas" RELATED synonym []
synonym: "Flavimonas" RELATED synonym []
synonym: "Liquidomonas" RELATED synonym []
synonym: "Loefflerella" RELATED synonym []
synonym: "Pseudomonas Migula 1894 (Approved Lists 1980)" RELATED synonym []
synonym: "RNA similarity group I" EXACT OMO:0003003 []
synonym: "Serpens" RELATED synonym []
synonym: "Serpens Hespell 1977 (Approved Lists 1980)" RELATED synonym []
xref: GC_ID:11
xref: PMID:10758879
xref: PMID:10939664
xref: PMID:15950132
xref: PMID:18048745
xref: PMID:7727274
xref: PMID:9103607
is_a: NCBITaxon:135621 ! Pseudomonadaceae
relationship: RO:0002162 NCBITaxon:286 ! Pseudomonas
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:2864
name: Dinophyceae
namespace: ncbi_taxonomy
synonym: "algae" RELATED in_part []
synonym: "Chromophyta" RELATED in_part []
synonym: "Dinoflagellata" RELATED synonym []
synonym: "dinoflagellates" EXACT genbank_common_name []
synonym: "dinoflagellates" RELATED blast_name []
synonym: "Dinophycidae" RELATED synonym []
synonym: "Dinophyta" RELATED synonym []
synonym: "dinophytes" EXACT OMO:0003003 []
synonym: "Pyrrhophyta" RELATED synonym []
synonym: "Pyrrophyta" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:33630 ! Alveolata
disjoint_from: NCBITaxon:5794 ! Apicomplexa
disjoint_from: NCBITaxon:5878 ! Ciliophora
relationship: RO:0002162 NCBITaxon:2864 ! Dinophyceae
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:287
name: Pseudomonas aeruginosa
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1224290
alt_id: NCBITaxon:1437768
alt_id: NCBITaxon:1437769
alt_id: NCBITaxon:1437770
alt_id: NCBITaxon:1508364
alt_id: NCBITaxon:1607811
alt_id: NCBITaxon:1607813
alt_id: NCBITaxon:1683559
alt_id: NCBITaxon:1683561
alt_id: NCBITaxon:1851858
alt_id: NCBITaxon:1851865
alt_id: NCBITaxon:1860124
alt_id: NCBITaxon:2952935
alt_id: NCBITaxon:3438876
alt_id: NCBITaxon:3452273
alt_id: NCBITaxon:665948
alt_id: NCBITaxon:912077
alt_id: NCBITaxon:931955
alt_id: NCBITaxon:931956
alt_id: NCBITaxon:931957
alt_id: NCBITaxon:931958
alt_id: NCBITaxon:932477
synonym: "Bacillus aeruginosus" RELATED synonym []
synonym: "Bacillus pyocyaneus" RELATED synonym []
synonym: "Bacterium aeruginosum" RELATED synonym []
synonym: "Bacterium pyocyaneum" RELATED synonym []
synonym: "Micrococcus pyocyaneus" RELATED synonym []
synonym: "probable synonym or variety: \"Pseudomonas polycolor\" Clara 1930" RELATED synonym []
synonym: "Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)" RELATED synonym []
synonym: "Pseudomonas polycolor" RELATED synonym []
synonym: "Pseudomonas pyocyanea" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:136841 ! Pseudomonas aeruginosa group
relationship: RO:0002162 NCBITaxon:287 ! Pseudomonas aeruginosa
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:28781
name: Adrianichthyoidei
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:76071 ! Beloniformes
relationship: RO:0002162 NCBITaxon:28781 ! Adrianichthyoidei
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:2886895
name: Halobacterium salinarum NRC-34001
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2109939
alt_id: NCBITaxon:2116525
synonym: "Halobacterium salinarum ATCC 33170" EXACT equivalent_name []
synonym: "Halobacterium sp. 63-R2" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:35023769
xref: PMID:37379421
is_a: NCBITaxon:2242 ! Halobacterium salinarum
relationship: RO:0002162 NCBITaxon:2886895 ! Halobacterium salinarum NRC-34001
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:28889
name: Thermoproteota
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1915410
alt_id: NCBITaxon:1978152
alt_id: NCBITaxon:51967
synonym: "\"Candidatus Marsarchaeota\" Jay et al. 2018" RELATED synonym []
synonym: "\"Candidatus Verstraetearchaeota\" Vanwonterghem et al. 2016" RELATED synonym []
synonym: "Candidatus Korarchaeota" RELATED synonym []
synonym: "Candidatus Martarchaeota" RELATED synonym []
synonym: "Candidatus Methanomethylicota" RELATED synonym []
synonym: "Crenarchaeota" RELATED synonym []
synonym: "crenarchaeotes" RELATED blast_name []
synonym: "Eocyta" RELATED synonym []
synonym: "Korarchaeota" EXACT equivalent_name []
synonym: "Methanomethylicota" EXACT equivalent_name []
synonym: "Thermoproteaeota" RELATED synonym []
synonym: "Thermoproteota corrig. Garrity and Holt 2021" RELATED synonym []
synonym: "Xenarchaea" RELATED synonym []
synonym: "Xenarchaeota" RELATED synonym []
xref: GC_ID:11
xref: PMID:11541975
xref: PMID:11837318
xref: PMID:2112744
xref: PMID:7510403
xref: PMID:7857801
xref: PMID:8123559
xref: PMID:8799176
xref: PMID:9039908
xref: PMID:9226896
is_a: NCBITaxon:1783275 ! Thermoproteati
disjoint_from: NCBITaxon:651137 ! Nitrososphaerota
relationship: RO:0002162 NCBITaxon:28889 ! Thermoproteota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:28890
name: Methanobacteriota
namespace: ncbi_taxonomy
synonym: "Euryarchaeota" RELATED synonym []
synonym: "euryarchaeotes" EXACT genbank_common_name []
synonym: "euryarchaeotes" RELATED blast_name []
synonym: "Methanobacteraeota" RELATED synonym []
xref: GC_ID:11
xref: PMID:11837318
xref: PMID:12054225
xref: PMID:2112744
is_a: NCBITaxon:3366610 ! Methanobacteriati
relationship: RO:0002162 NCBITaxon:28890 ! Methanobacteriota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:28901
name: Salmonella enterica
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2303554
alt_id: NCBITaxon:2303555
alt_id: NCBITaxon:2303556
alt_id: NCBITaxon:2303557
alt_id: NCBITaxon:2303558
alt_id: NCBITaxon:2303559
alt_id: NCBITaxon:2303560
alt_id: NCBITaxon:2303561
alt_id: NCBITaxon:2303562
alt_id: NCBITaxon:2303563
alt_id: NCBITaxon:2303564
alt_id: NCBITaxon:2303565
alt_id: NCBITaxon:2303566
alt_id: NCBITaxon:2303567
alt_id: NCBITaxon:2303568
alt_id: NCBITaxon:2303569
alt_id: NCBITaxon:2303570
alt_id: NCBITaxon:2303572
alt_id: NCBITaxon:2303573
alt_id: NCBITaxon:2303574
alt_id: NCBITaxon:2303575
alt_id: NCBITaxon:2305020
alt_id: NCBITaxon:2305021
alt_id: NCBITaxon:2305022
alt_id: NCBITaxon:2305023
alt_id: NCBITaxon:2305024
alt_id: NCBITaxon:2305025
alt_id: NCBITaxon:2305026
alt_id: NCBITaxon:2305027
alt_id: NCBITaxon:2305028
alt_id: NCBITaxon:2305029
alt_id: NCBITaxon:2305030
alt_id: NCBITaxon:2305031
alt_id: NCBITaxon:2305032
alt_id: NCBITaxon:2305033
alt_id: NCBITaxon:2305034
alt_id: NCBITaxon:2305451
alt_id: NCBITaxon:2305460
alt_id: NCBITaxon:2305461
alt_id: NCBITaxon:2306016
alt_id: NCBITaxon:2306017
alt_id: NCBITaxon:2306987
alt_id: NCBITaxon:2306988
alt_id: NCBITaxon:2306989
alt_id: NCBITaxon:2306999
alt_id: NCBITaxon:2307000
alt_id: NCBITaxon:2307001
alt_id: NCBITaxon:2315835
alt_id: NCBITaxon:2320429
alt_id: NCBITaxon:2320430
alt_id: NCBITaxon:2339222
alt_id: NCBITaxon:2339223
alt_id: NCBITaxon:2339224
alt_id: NCBITaxon:2339225
alt_id: NCBITaxon:2339226
alt_id: NCBITaxon:2340790
alt_id: NCBITaxon:2340792
alt_id: NCBITaxon:2364662
alt_id: NCBITaxon:2364671
alt_id: NCBITaxon:2364672
alt_id: NCBITaxon:2364674
alt_id: NCBITaxon:2364675
alt_id: NCBITaxon:2364676
alt_id: NCBITaxon:2364677
alt_id: NCBITaxon:2364680
alt_id: NCBITaxon:2364681
alt_id: NCBITaxon:2364682
alt_id: NCBITaxon:2364685
alt_id: NCBITaxon:2364686
alt_id: NCBITaxon:2364690
alt_id: NCBITaxon:2364691
alt_id: NCBITaxon:2364692
alt_id: NCBITaxon:2364693
alt_id: NCBITaxon:2364694
alt_id: NCBITaxon:2364696
alt_id: NCBITaxon:2364698
alt_id: NCBITaxon:2364699
alt_id: NCBITaxon:2364700
alt_id: NCBITaxon:2364701
alt_id: NCBITaxon:2364706
alt_id: NCBITaxon:2364707
alt_id: NCBITaxon:2364708
alt_id: NCBITaxon:2364709
alt_id: NCBITaxon:2364710
alt_id: NCBITaxon:2364711
alt_id: NCBITaxon:2364712
alt_id: NCBITaxon:2364714
alt_id: NCBITaxon:2364715
alt_id: NCBITaxon:2364716
alt_id: NCBITaxon:2364717
alt_id: NCBITaxon:2364718
alt_id: NCBITaxon:2364720
alt_id: NCBITaxon:2364722
alt_id: NCBITaxon:2364724
alt_id: NCBITaxon:2364725
alt_id: NCBITaxon:2364726
alt_id: NCBITaxon:2364727
alt_id: NCBITaxon:2364728
alt_id: NCBITaxon:2364729
alt_id: NCBITaxon:2364730
alt_id: NCBITaxon:2364731
alt_id: NCBITaxon:2364732
alt_id: NCBITaxon:2364733
alt_id: NCBITaxon:2364734
alt_id: NCBITaxon:2364735
alt_id: NCBITaxon:2364738
alt_id: NCBITaxon:2364739
alt_id: NCBITaxon:2364740
alt_id: NCBITaxon:2364746
alt_id: NCBITaxon:2364750
alt_id: NCBITaxon:2364751
alt_id: NCBITaxon:2364753
alt_id: NCBITaxon:2364754
alt_id: NCBITaxon:2364760
alt_id: NCBITaxon:2364761
alt_id: NCBITaxon:2364765
alt_id: NCBITaxon:2364767
alt_id: NCBITaxon:2364768
alt_id: NCBITaxon:2419811
alt_id: NCBITaxon:2419812
alt_id: NCBITaxon:2419813
alt_id: NCBITaxon:2419814
alt_id: NCBITaxon:2419815
alt_id: NCBITaxon:2419816
alt_id: NCBITaxon:2419817
alt_id: NCBITaxon:2419818
alt_id: NCBITaxon:2419819
alt_id: NCBITaxon:2419820
alt_id: NCBITaxon:2419821
alt_id: NCBITaxon:2419822
alt_id: NCBITaxon:2419823
alt_id: NCBITaxon:2419824
alt_id: NCBITaxon:2447895
alt_id: NCBITaxon:2478510
alt_id: NCBITaxon:2478511
alt_id: NCBITaxon:2478512
alt_id: NCBITaxon:2478513
alt_id: NCBITaxon:2478514
alt_id: NCBITaxon:2478515
alt_id: NCBITaxon:2478516
alt_id: NCBITaxon:2478517
alt_id: NCBITaxon:2478518
alt_id: NCBITaxon:2478519
alt_id: NCBITaxon:2478520
alt_id: NCBITaxon:2478521
alt_id: NCBITaxon:2478522
alt_id: NCBITaxon:2478523
alt_id: NCBITaxon:2478525
alt_id: NCBITaxon:2478526
alt_id: NCBITaxon:2478527
alt_id: NCBITaxon:2478528
alt_id: NCBITaxon:2479845
alt_id: NCBITaxon:2483348
alt_id: NCBITaxon:2483349
alt_id: NCBITaxon:2483350
alt_id: NCBITaxon:2485240
alt_id: NCBITaxon:2485241
alt_id: NCBITaxon:2485242
alt_id: NCBITaxon:2485243
alt_id: NCBITaxon:2485244
alt_id: NCBITaxon:2485246
alt_id: NCBITaxon:2485247
alt_id: NCBITaxon:2485248
alt_id: NCBITaxon:2485249
alt_id: NCBITaxon:2485251
alt_id: NCBITaxon:2485252
alt_id: NCBITaxon:2485253
alt_id: NCBITaxon:2485256
alt_id: NCBITaxon:2485986
alt_id: NCBITaxon:2485987
alt_id: NCBITaxon:2485988
alt_id: NCBITaxon:2485989
alt_id: NCBITaxon:2485990
alt_id: NCBITaxon:2485991
alt_id: NCBITaxon:2485992
alt_id: NCBITaxon:2485993
alt_id: NCBITaxon:2485994
alt_id: NCBITaxon:2485995
alt_id: NCBITaxon:2485996
alt_id: NCBITaxon:2486723
alt_id: NCBITaxon:2486724
alt_id: NCBITaxon:2486725
alt_id: NCBITaxon:2486726
alt_id: NCBITaxon:2486727
alt_id: NCBITaxon:2486728
alt_id: NCBITaxon:2486729
alt_id: NCBITaxon:2486730
alt_id: NCBITaxon:2486731
alt_id: NCBITaxon:2486973
alt_id: NCBITaxon:2516332
alt_id: NCBITaxon:2516333
alt_id: NCBITaxon:2516334
alt_id: NCBITaxon:2516335
alt_id: NCBITaxon:2516336
alt_id: NCBITaxon:2516337
alt_id: NCBITaxon:2516338
alt_id: NCBITaxon:2516339
alt_id: NCBITaxon:2516340
alt_id: NCBITaxon:2516341
alt_id: NCBITaxon:2516342
alt_id: NCBITaxon:2516343
alt_id: NCBITaxon:2516344
alt_id: NCBITaxon:2516345
alt_id: NCBITaxon:2516346
alt_id: NCBITaxon:2516347
alt_id: NCBITaxon:2516348
alt_id: NCBITaxon:2516349
alt_id: NCBITaxon:2516350
alt_id: NCBITaxon:3109037
alt_id: NCBITaxon:3109038
alt_id: NCBITaxon:3109039
alt_id: NCBITaxon:3109040
alt_id: NCBITaxon:3109041
alt_id: NCBITaxon:3109042
alt_id: NCBITaxon:3109043
alt_id: NCBITaxon:3109044
alt_id: NCBITaxon:3109045
alt_id: NCBITaxon:3109046
alt_id: NCBITaxon:3109047
alt_id: NCBITaxon:3109048
alt_id: NCBITaxon:3109049
alt_id: NCBITaxon:3109050
alt_id: NCBITaxon:3109056
alt_id: NCBITaxon:3109057
alt_id: NCBITaxon:591
synonym: "Bacillus cholerae-suis" RELATED synonym []
synonym: "Salmonella cholerae-suis" RELATED synonym []
synonym: "Salmonella choleraesuis" RELATED synonym []
synonym: "Salmonella enterica ser. choleraesuis" RELATED synonym []
xref: GC_ID:11
xref: PMID:10319519
xref: PMID:10939679
xref: PMID:15653929
xref: PMID:15653930
is_a: NCBITaxon:590 ! Salmonella
relationship: RO:0002162 NCBITaxon:28901 ! Salmonella enterica
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:289376
name: Thermodesulfovibrio yellowstonii DSM 11347
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:28262 ! Thermodesulfovibrio yellowstonii
relationship: RO:0002162 NCBITaxon:289376 ! Thermodesulfovibrio yellowstonii DSM 11347
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:28983
name: Sclerotiniaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:117566
xref: GC_ID:1
is_a: NCBITaxon:5178 ! Helotiales
relationship: RO:0002162 NCBITaxon:28983 ! Sclerotiniaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:29000
name: Pucciniomycotina
namespace: ncbi_taxonomy
synonym: "rust fungi & allies" EXACT OMO:0003003 []
synonym: "rust fungi & allies" RELATED blast_name []
synonym: "Urediniomycetes" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:5204 ! Basidiomycota
disjoint_from: NCBITaxon:5302 ! Agaricomycotina
relationship: RO:0002162 NCBITaxon:29000 ! Pucciniomycotina
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:2916678
name: Serinales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3243776
synonym: "CTG clade" EXACT OMO:0003003 []
synonym: "CUG-Ser1 clade" EXACT genbank_common_name []
xref: GC_ID:12
xref: PMID:29760453
xref: PMID:33607033
is_a: NCBITaxon:3239874 ! Pichiomycetes
relationship: RO:0002162 NCBITaxon:2916678 ! Serinales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:29202
name: Thalassiosiraceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33847 ! Thalassiosirales
relationship: RO:0002162 NCBITaxon:29202 ! Thalassiosiraceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:29547
name: Campylobacterota
namespace: ncbi_taxonomy
synonym: "e-proteobacteria" EXACT genbank_common_name []
synonym: "e-proteobacteria" RELATED blast_name []
synonym: "epsilon proteobacteria" RELATED synonym []
synonym: "epsilon subdivision" RELATED synonym []
synonym: "epsilon subgroup" RELATED synonym []
synonym: "Epsilonbacteraeota" RELATED synonym []
synonym: "Proteobacteria epsilon subdivision" RELATED synonym []
synonym: "Purple bacteria, epsilon subdivision" RELATED synonym []
xref: GC_ID:11
xref: PMID:28484436
is_a: NCBITaxon:3379134 ! Pseudomonadati
disjoint_from: NCBITaxon:40117 ! Nitrospirota
disjoint_from: NCBITaxon:68297 ! Dictyoglomota
relationship: RO:0002162 NCBITaxon:29547 ! Campylobacterota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:29655
name: Zostera marina
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:18006507
is_a: NCBITaxon:27257 ! Zostera
relationship: RO:0002162 NCBITaxon:29655 ! Zostera marina
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:297308
name: Ixodoidea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6935 ! Ixodida
relationship: RO:0002162 NCBITaxon:297308 ! Ixodoidea
property_value: has_rank NCBITaxon:superfamily
property_value: TAXRANK:1000000 TAXRANK:0000018

[Term]
id: NCBITaxon:29760
name: Vitis vinifera
namespace: ncbi_taxonomy
synonym: "Vitis vinifera subsp. vinifera" RELATED synonym []
synonym: "wine grape" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:3603 ! Vitis
relationship: RO:0002162 NCBITaxon:29760 ! Vitis vinifera
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:2995234
name: Mycoplasmoides
namespace: ncbi_taxonomy
xref: GC_ID:4
xref: PMID:31385780
xref: PMID:31971499
xref: PMID:35947640
is_a: NCBITaxon:2790998 ! Mycoplasmoidaceae
relationship: RO:0002162 NCBITaxon:2995234 ! Mycoplasmoides
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3027
name: Cryptophyceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2895
synonym: "algae" RELATED in_part []
synonym: "Chromophyta" RELATED in_part []
synonym: "Cryptomonadida" RELATED synonym []
synonym: "cryptomonads" EXACT genbank_common_name []
synonym: "cryptomonads" RELATED blast_name []
synonym: "Cryptophyta" RELATED synonym []
synonym: "cryptophytes" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:2759 ! Eukaryota
disjoint_from: NCBITaxon:33090 ! Viridiplantae
disjoint_from: NCBITaxon:33154 ! Opisthokonta
disjoint_from: NCBITaxon:38254 ! Glaucocystophyceae
disjoint_from: NCBITaxon:554915 ! Amoebozoa
relationship: RO:0002162 NCBITaxon:3027 ! Cryptophyceae
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:3028117
name: Cyanophyceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:307596
synonym: "c__Cyanobacteriia" EXACT equivalent_name []
synonym: "Gloeobacteria" RELATED synonym []
xref: GC_ID:11
xref: PMID:11837318
is_a: NCBITaxon:1117 ! Cyanobacteriota
relationship: RO:0002162 NCBITaxon:3028117 ! Cyanophyceae
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:3031651
name: Desulfuromonadia
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:200940 ! Thermodesulfobacteriota
relationship: RO:0002162 NCBITaxon:3031651 ! Desulfuromonadia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:3031668
name: Geobacterales
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:3031651 ! Desulfuromonadia
relationship: RO:0002162 NCBITaxon:3031668 ! Geobacterales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3031852
name: Epsilonproteobacteria
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:11837318
is_a: NCBITaxon:29547 ! Campylobacterota
relationship: RO:0002162 NCBITaxon:3031852 ! Epsilonproteobacteria
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:30319
name: Pipoidea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:8342 ! Anura
relationship: RO:0002162 NCBITaxon:30319 ! Pipoidea
property_value: has_rank NCBITaxon:superfamily
property_value: TAXRANK:1000000 TAXRANK:0000018

[Term]
id: NCBITaxon:3041
name: Chlorophyta
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1541723
alt_id: NCBITaxon:3073245
synonym: "algae" RELATED in_part []
synonym: "Chlorophycota" RELATED synonym []
synonym: "Chlorophyta sensu Bremer 1985" RELATED synonym []
synonym: "green algae" EXACT genbank_common_name []
synonym: "green algae" RELATED blast_name []
synonym: "prasinophytes" RELATED in_part []
xref: GC_ID:1
xref: PMID:23020233
is_a: NCBITaxon:33090 ! Viridiplantae
disjoint_from: NCBITaxon:35493 ! Streptophyta
relationship: RO:0002162 NCBITaxon:3041 ! Chlorophyta
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:3042
name: Chlamydomonadales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:167765
alt_id: NCBITaxon:2491657
alt_id: NCBITaxon:3069
synonym: "Chlorococcales" RELATED synonym []
synonym: "Volvocales" RELATED synonym []
synonym: "Volvocida" RELATED synonym []
xref: GC_ID:1
xref: PMID:8728397
is_a: NCBITaxon:2812636 ! CS clade
relationship: RO:0002162 NCBITaxon:3042 ! Chlamydomonadales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3043701
name: Uniplacotomia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:10226 ! Placozoa
relationship: RO:0002162 NCBITaxon:3043701 ! Uniplacotomia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:3043702
name: Trichoplacea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3043701 ! Uniplacotomia
relationship: RO:0002162 NCBITaxon:3043702 ! Trichoplacea
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3051
name: Chlamydomonadaceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3042 ! Chlamydomonadales
relationship: RO:0002162 NCBITaxon:3051 ! Chlamydomonadaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:3052
name: Chlamydomonas
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3051 ! Chlamydomonadaceae
relationship: RO:0002162 NCBITaxon:3052 ! Chlamydomonas
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3055
name: Chlamydomonas reinhardtii
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3058
alt_id: NCBITaxon:61248
synonym: "Chlamydomonas smithii" RELATED synonym []
xref: GC_ID:1
xref: PMID:12355262
xref: PMID:27053409
is_a: NCBITaxon:3052 ! Chlamydomonas
relationship: RO:0002162 NCBITaxon:3055 ! Chlamydomonas reinhardtii
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:30727
name: Cyprinoidei
namespace: ncbi_taxonomy
synonym: "Cyprinoidea" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:7952 ! Cypriniformes
relationship: RO:0002162 NCBITaxon:30727 ! Cyprinoidei
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:307595
name: Gloeobacterales
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:25288668
is_a: NCBITaxon:3028117 ! Cyanophyceae
relationship: RO:0002162 NCBITaxon:307595 ! Gloeobacterales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3104451
name: Selaginelloideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3245 ! Selaginellaceae
relationship: RO:0002162 NCBITaxon:3104451 ! Selaginelloideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:311400
name: Thermococcus kodakarensis
namespace: ncbi_taxonomy
synonym: "Pyrococcus kodakaraensis" RELATED synonym []
synonym: "Thermococcus kodakarensis corrig. Atomi et al. 2005" RELATED synonym []
xref: GC_ID:11
xref: PMID:11029579
xref: PMID:7811092
xref: PMID:9890143
is_a: NCBITaxon:2263 ! Thermococcus
relationship: RO:0002162 NCBITaxon:311400 ! Thermococcus kodakarensis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:31181
name: Strongylocentrotidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7675 ! Echinidea
relationship: RO:0002162 NCBITaxon:31181 ! Strongylocentrotidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:3118682
name: Leptospiria
namespace: ncbi_taxonomy
synonym: "Leptospiria Chuvochina et al. 2024" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:203691 ! Spirochaetota
relationship: RO:0002162 NCBITaxon:3118682 ! Leptospiria
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:314145
name: Laurasiatheria
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:11214318
xref: PMID:11214319
xref: PMID:12878460
is_a: NCBITaxon:1437010 ! Boreoeutheria
disjoint_from: NCBITaxon:314146 ! Euarchontoglires
relationship: RO:0002162 NCBITaxon:314145 ! Laurasiatheria
property_value: has_rank NCBITaxon:superorder
property_value: TAXRANK:1000000 TAXRANK:0000020

[Term]
id: NCBITaxon:314146
name: Euarchontoglires
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:11214319
xref: PMID:12082125
xref: PMID:12878460
xref: PMID:15522813
is_a: NCBITaxon:1437010 ! Boreoeutheria
relationship: RO:0002162 NCBITaxon:314146 ! Euarchontoglires
property_value: has_rank NCBITaxon:superorder
property_value: TAXRANK:1000000 TAXRANK:0000020

[Term]
id: NCBITaxon:314147
name: Glires
namespace: ncbi_taxonomy
synonym: "Rodents and rabbits" EXACT genbank_common_name []
xref: GC_ID:1
xref: PMID:11214319
xref: PMID:12082125
xref: PMID:15522813
is_a: NCBITaxon:314146 ! Euarchontoglires
disjoint_from: NCBITaxon:9443 ! Primates
relationship: RO:0002162 NCBITaxon:314147 ! Glires
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:314293
name: Simiiformes
namespace: ncbi_taxonomy
synonym: "Anthropoidea" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:376913 ! Haplorrhini
relationship: RO:0002162 NCBITaxon:314293 ! Simiiformes
property_value: has_rank NCBITaxon:infraorder
property_value: TAXRANK:1000000 TAXRANK:0000013

[Term]
id: NCBITaxon:314294
name: Cercopithecoidea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9526 ! Catarrhini
disjoint_from: NCBITaxon:314295 ! Hominoidea
relationship: RO:0002162 NCBITaxon:314294 ! Cercopithecoidea
property_value: has_rank NCBITaxon:superfamily
property_value: TAXRANK:1000000 TAXRANK:0000018

[Term]
id: NCBITaxon:314295
name: Hominoidea
namespace: ncbi_taxonomy
synonym: "ape" EXACT OMO:0003003 []
synonym: "apes" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:9526 ! Catarrhini
relationship: RO:0002162 NCBITaxon:314295 ! Hominoidea
property_value: has_rank NCBITaxon:superfamily
property_value: TAXRANK:1000000 TAXRANK:0000018

[Term]
id: NCBITaxon:3166
name: Chlorophyceae
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:23020233
is_a: NCBITaxon:2692248 ! core chlorophytes
relationship: RO:0002162 NCBITaxon:3166 ! Chlorophyceae
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:3176
name: Zygnematales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2684882 ! Zygnematophycidae
relationship: RO:0002162 NCBITaxon:3176 ! Zygnematales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3193
name: Embryophyta
namespace: ncbi_taxonomy
synonym: "higher plants" EXACT OMO:0003003 []
synonym: "land plants" EXACT genbank_common_name []
synonym: "land plants" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:131221 ! Streptophytina
relationship: RO:0002162 NCBITaxon:3193 ! Embryophyta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:31932
name: Nitrosopumilales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:338189
synonym: "archaeal group 1" RELATED synonym []
synonym: "Archaeobacterium group 1" RELATED synonym []
synonym: "marine archaeal group 1" RELATED synonym []
synonym: "marine group1 Crenarchaeota" RELATED synonym []
synonym: "marine group1 Thaumarchaeota" RELATED synonym []
xref: GC_ID:11
xref: PMID:16177789
xref: PMID:29034851
is_a: NCBITaxon:1643678 ! Nitrososphaeria
relationship: RO:0002162 NCBITaxon:31932 ! Nitrosopumilales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:31979
name: Clostridiaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:186802 ! Eubacteriales
relationship: RO:0002162 NCBITaxon:31979 ! Clostridiaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:32033
name: Lysobacteraceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:67
synonym: "Xanthomonadaceae" RELATED synonym []
synonym: "Xanthomonadaceae Saddler and Bradbury 2005" RELATED synonym []
synonym: "Xanthomonas group" EXACT OMO:0003003 []
xref: GC_ID:11
xref: PMID:16559821
xref: PMID:24408949
xref: PMID:25481407
is_a: NCBITaxon:135614 ! Lysobacterales
relationship: RO:0002162 NCBITaxon:32033 ! Lysobacteraceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:32061
name: Chloroflexia
namespace: ncbi_taxonomy
synonym: "Chloroflexaceae/Deinococcaceae group" RELATED in_part []
synonym: "Chloroflexi" RELATED synonym []
synonym: "Chloroflexus/Deinococcaceae group" RELATED in_part []
synonym: "Chloroflexus/Deinococcus group" RELATED in_part []
xref: GC_ID:11
xref: PMID:11542017
xref: PMID:11542088
xref: PMID:11837318
xref: PMID:22903492
is_a: NCBITaxon:200795 ! Chloroflexota
relationship: RO:0002162 NCBITaxon:32061 ! Chloroflexia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:32064
name: Chloroflexales
namespace: ncbi_taxonomy
synonym: "Chloroflexaceae group" RELATED synonym []
synonym: "Chloroflexus group" RELATED synonym []
xref: GC_ID:11
xref: PMID:22903492
is_a: NCBITaxon:32061 ! Chloroflexia
relationship: RO:0002162 NCBITaxon:32064 ! Chloroflexales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:32066
name: Fusobacteriota
namespace: ncbi_taxonomy
synonym: "Fusobacteraeota" RELATED synonym []
synonym: "Fusobacteria" RELATED synonym []
synonym: "fusobacteria" RELATED blast_name []
synonym: "Fusobacteriota corrig. Garrity and Holt 2021" RELATED synonym []
xref: GC_ID:11
xref: PMID:24969840
xref: PMID:29458499
is_a: NCBITaxon:3384189 ! Fusobacteriati
relationship: RO:0002162 NCBITaxon:32066 ! Fusobacteriota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:32069
name: Aquificales
namespace: ncbi_taxonomy
synonym: "aquificales" RELATED blast_name []
synonym: "Hydrogenic oxygen reducing bacteria" RELATED synonym []
synonym: "Obligately chemolithotrophic hydrogen bacteria" RELATED synonym []
synonym: "Oxygen reducing bacteria" RELATED synonym []
synonym: "Oxygen-reducing bacteria" RELATED synonym []
xref: GC_ID:11
xref: PMID:12054225
xref: PMID:15214637
xref: PMID:16403873
xref: PMID:17158986
xref: PMID:23812969
xref: PMID:7981093
is_a: NCBITaxon:187857 ! Aquificia
relationship: RO:0002162 NCBITaxon:32069 ! Aquificales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3208
name: Bryophyta
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3194
synonym: "bryophytes" RELATED in_part []
synonym: "mosses" EXACT genbank_common_name []
synonym: "mosses" RELATED blast_name []
synonym: "Musci" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:3193 ! Embryophyta
disjoint_from: NCBITaxon:58023 ! Tracheophyta
relationship: RO:0002162 NCBITaxon:3208 ! Bryophyta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3214
name: Bryopsida
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:404260 ! Bryophytina
relationship: RO:0002162 NCBITaxon:3214 ! Bryopsida
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:3215
name: Funariales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:114656 ! Funariidae
relationship: RO:0002162 NCBITaxon:3215 ! Funariales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3216
name: Funariaceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3215 ! Funariales
relationship: RO:0002162 NCBITaxon:3216 ! Funariaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:321614
name: Parastagonospora nodorum SN15
namespace: ncbi_taxonomy
synonym: "Phaeosphaeria nodorum SN15" EXACT equivalent_name []
xref: GC_ID:1
is_a: NCBITaxon:13684 ! Parastagonospora nodorum
relationship: RO:0002162 NCBITaxon:321614 ! Parastagonospora nodorum SN15
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:3218
name: Physcomitrium patens
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1130753
alt_id: NCBITaxon:145481
synonym: "Phascum patens" RELATED synonym []
synonym: "Physcomitrella patens" RELATED synonym []
synonym: "Physcomitrella patens subsp. patens" RELATED synonym []
xref: GC_ID:1
xref: PMID:25015729
is_a: NCBITaxon:37414 ! Physcomitrium
relationship: RO:0002162 NCBITaxon:3218 ! Physcomitrium patens
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:32341
name: Sophophora
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7215 ! Drosophila <flies,genus>
relationship: RO:0002162 NCBITaxon:32341 ! Sophophora
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:32346
name: melanogaster group
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:32341 ! Sophophora
relationship: RO:0002162 NCBITaxon:32346 ! melanogaster group
property_value: has_rank species_group
property_value: TAXRANK:1000000 TAXRANK:0000010

[Term]
id: NCBITaxon:32351
name: melanogaster subgroup
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:32346 ! melanogaster group
relationship: RO:0002162 NCBITaxon:32351 ! melanogaster subgroup
property_value: has_rank species_subgroup
property_value: TAXRANK:1000000 TAXRANK:0000011

[Term]
id: NCBITaxon:3239873
name: Dipodascomycetes
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147537 ! Saccharomycotina
disjoint_from: NCBITaxon:3239874 ! Pichiomycetes
disjoint_from: NCBITaxon:4891 ! Saccharomycetes
relationship: RO:0002162 NCBITaxon:3239873 ! Dipodascomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:3239874
name: Pichiomycetes
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147537 ! Saccharomycotina
disjoint_from: NCBITaxon:4891 ! Saccharomycetes
relationship: RO:0002162 NCBITaxon:3239874 ! Pichiomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:3243772
name: Dipodascales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3239873 ! Dipodascomycetes
relationship: RO:0002162 NCBITaxon:3243772 ! Dipodascales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3244
name: Selaginellales
namespace: ncbi_taxonomy
synonym: "spike mosses" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:1521260 ! Lycopodiopsida
relationship: RO:0002162 NCBITaxon:3244 ! Selaginellales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:32443
name: Teleostei
namespace: ncbi_taxonomy
synonym: "teleost fishes" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:41665 ! Neopterygii
relationship: RO:0002162 NCBITaxon:32443 ! Teleostei
property_value: has_rank NCBITaxon:infraclass
property_value: TAXRANK:1000000 TAXRANK:0000019

[Term]
id: NCBITaxon:3245
name: Selaginellaceae
namespace: ncbi_taxonomy
synonym: "spike mosses" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:3244 ! Selaginellales
relationship: RO:0002162 NCBITaxon:3245 ! Selaginellaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:3246
name: Selaginella
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3104464
synonym: "Kungiselaginella" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:3104451 ! Selaginelloideae
relationship: RO:0002162 NCBITaxon:3246 ! Selaginella
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:324602
name: Chloroflexus aurantiacus J-10-fl
namespace: ncbi_taxonomy
synonym: "Chloroflexus aurantiacus ATCC 29366" RELATED synonym []
synonym: "Chloroflexus aurantiacus DSM 635" RELATED synonym []
synonym: "Chloroflexus aurantiacus str. J-10-fl" EXACT equivalent_name []
synonym: "Chloroflexus aurantiacus strain J-10-fl" EXACT equivalent_name []
xref: GC_ID:11
is_a: NCBITaxon:1108 ! Chloroflexus aurantiacus
relationship: RO:0002162 NCBITaxon:324602 ! Chloroflexus aurantiacus J-10-fl
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:32519
name: Ostariophysi
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:186634 ! Otomorpha
relationship: RO:0002162 NCBITaxon:32519 ! Ostariophysi
property_value: has_rank NCBITaxon:subcohort
property_value: TAXRANK:1000000 TAXRANK:0001012

[Term]
id: NCBITaxon:32523
name: Tetrapoda
namespace: ncbi_taxonomy
synonym: "tetrapods" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:1338369 ! Dipnotetrapodomorpha
relationship: RO:0002162 NCBITaxon:32523 ! Tetrapoda
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:32524
name: Amniota
namespace: ncbi_taxonomy
synonym: "amniotes" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:32523 ! Tetrapoda
disjoint_from: NCBITaxon:8292 ! Amphibia
relationship: RO:0002162 NCBITaxon:32524 ! Amniota
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:32525
name: Theria <mammals>
namespace: ncbi_taxonomy
synonym: "Theria" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:40674 ! Mammalia
disjoint_from: NCBITaxon:9254 ! Prototheria
relationship: RO:0002162 NCBITaxon:32525 ! Theria <mammals>
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:32561
name: Sauria
namespace: ncbi_taxonomy
synonym: "Diapsida" RELATED synonym []
synonym: "diapsids" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:8457 ! Sauropsida
relationship: RO:0002162 NCBITaxon:32561 ! Sauria
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:33071
name: Gloeobacter
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:1890422 ! Gloeobacteraceae
relationship: RO:0002162 NCBITaxon:33071 ! Gloeobacter
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:33072
name: Gloeobacter violaceus
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:33071 ! Gloeobacter
relationship: RO:0002162 NCBITaxon:33072 ! Gloeobacter violaceus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:33083
name: Dictyostelia
namespace: ncbi_taxonomy
synonym: "cellular slime molds" EXACT genbank_common_name []
synonym: "cellular slime molds" RELATED blast_name []
synonym: "dictyostelid cellular slime molds" EXACT OMO:0003003 []
synonym: "Dictyostelida" RELATED synonym []
synonym: "Dictyostelids" RELATED synonym []
synonym: "Dictyosteliida" RELATED synonym []
xref: GC_ID:1
xref: PMID:11062127
xref: PMID:29367151
xref: PMID:9342353
is_a: NCBITaxon:142796 ! Eumycetozoa
relationship: RO:0002162 NCBITaxon:33083 ! Dictyostelia
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:33084
name: Entamoebidae
namespace: ncbi_taxonomy
synonym: "Entamoebida" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:2682482 ! Mastigamoebida
relationship: RO:0002162 NCBITaxon:33084 ! Entamoebidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:330879
name: Aspergillus fumigatus Af293
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:746128 ! Aspergillus fumigatus
relationship: RO:0002162 NCBITaxon:330879 ! Aspergillus fumigatus Af293
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:33090
name: Viridiplantae
namespace: ncbi_taxonomy
synonym: "Chlorobionta" RELATED synonym []
synonym: "Chlorophyta/Embryophyta group" EXACT equivalent_name []
synonym: "chlorophyte/embryophyte group" EXACT equivalent_name []
synonym: "Chloroplastida" RELATED synonym []
synonym: "green plants" EXACT genbank_common_name []
synonym: "green plants" RELATED blast_name []
synonym: "plants" EXACT OMO:0003003 []
xref: GC_ID:1
xref: PMID:16248873
xref: PMID:30257078
is_a: NCBITaxon:2759 ! Eukaryota
disjoint_from: NCBITaxon:33154 ! Opisthokonta
disjoint_from: NCBITaxon:38254 ! Glaucocystophyceae
disjoint_from: NCBITaxon:554915 ! Amoebozoa
relationship: RO:0002162 NCBITaxon:33090 ! Viridiplantae
property_value: has_rank NCBITaxon:kingdom
property_value: TAXRANK:1000000 TAXRANK:0000017

[Term]
id: NCBITaxon:33154
name: Opisthokonta
namespace: ncbi_taxonomy
synonym: "Fungi/Metazoa group" RELATED synonym []
synonym: "opisthokonts" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:2759 ! Eukaryota
disjoint_from: NCBITaxon:38254 ! Glaucocystophyceae
disjoint_from: NCBITaxon:554915 ! Amoebozoa
relationship: RO:0002162 NCBITaxon:33154 ! Opisthokonta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3316682
name: Dipodascales incertae sedis
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3243772 ! Dipodascales
relationship: RO:0002162 NCBITaxon:3316682 ! Dipodascales incertae sedis

[Term]
id: NCBITaxon:33169
name: Eremothecium gossypii
namespace: ncbi_taxonomy
synonym: "Ashbya gossypii (S.F. Ashby & W. Nowell) Guillierm., 1928" RELATED synonym []
synonym: "Nematospora gossypii" RELATED synonym []
xref: GC_ID:1
xref: PMID:12748053
xref: PMID:7662294
xref: PMID:9271109
is_a: NCBITaxon:33170 ! Eremothecium
relationship: RO:0002162 NCBITaxon:33169 ! Eremothecium gossypii
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:33170
name: Eremothecium
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1348568
alt_id: NCBITaxon:217889
alt_id: NCBITaxon:244058
alt_id: NCBITaxon:244059
alt_id: NCBITaxon:33168
alt_id: NCBITaxon:33172
alt_id: NCBITaxon:46675
synonym: "Ashbya" RELATED synonym []
synonym: "Holleya" RELATED synonym []
synonym: "Nematospora" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4893 ! Saccharomycetaceae
disjoint_from: NCBITaxon:4930 ! Saccharomyces
relationship: RO:0002162 NCBITaxon:33170 ! Eremothecium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:33208
name: Metazoa
namespace: ncbi_taxonomy
synonym: "Animalia" RELATED synonym []
synonym: "animals" EXACT genbank_common_name []
synonym: "animals" RELATED blast_name []
synonym: "metazoans" EXACT OMO:0003003 []
synonym: "multicellular animals" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:33154 ! Opisthokonta
disjoint_from: NCBITaxon:4751 ! Fungi
relationship: RO:0002162 NCBITaxon:33208 ! Metazoa
property_value: has_rank NCBITaxon:kingdom
property_value: TAXRANK:1000000 TAXRANK:0000017

[Term]
id: NCBITaxon:33213
name: Bilateria
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6072 ! Eumetazoa
disjoint_from: NCBITaxon:6073 ! Cnidaria
relationship: RO:0002162 NCBITaxon:33213 ! Bilateria
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:33317
name: Protostomia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33213 ! Bilateria
disjoint_from: NCBITaxon:33511 ! Deuterostomia
relationship: RO:0002162 NCBITaxon:33317 ! Protostomia
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:33340
name: Neoptera
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7496 ! Pterygota <insects>
relationship: RO:0002162 NCBITaxon:33340 ! Neoptera
property_value: has_rank NCBITaxon:infraclass
property_value: TAXRANK:1000000 TAXRANK:0000019

[Term]
id: NCBITaxon:33392
name: Endopterygota
namespace: ncbi_taxonomy
synonym: "Holometabola" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:3701061 ! Eumetabola
relationship: RO:0002162 NCBITaxon:33392 ! Endopterygota
property_value: has_rank NCBITaxon:cohort
property_value: TAXRANK:1000000 TAXRANK:0001010

[Term]
id: NCBITaxon:3342163
name: Candidatus Korarchaeia
namespace: ncbi_taxonomy
synonym: "Korarchaeia" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:7857801
xref: PMID:8123559
is_a: NCBITaxon:28889 ! Thermoproteota
relationship: RO:0002162 NCBITaxon:3342163 ! Candidatus Korarchaeia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:3342181
name: Candidatus Korarchaeales
namespace: ncbi_taxonomy
synonym: "Korarchaeales" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:7857801
xref: PMID:8123559
is_a: NCBITaxon:3342163 ! Candidatus Korarchaeia
relationship: RO:0002162 NCBITaxon:3342181 ! Candidatus Korarchaeales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3342182
name: Candidatus Korarchaeaceae
namespace: ncbi_taxonomy
synonym: "Korarchaeaceae" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:7857801
xref: PMID:8123559
is_a: NCBITaxon:3342181 ! Candidatus Korarchaeales
relationship: RO:0002162 NCBITaxon:3342182 ! Candidatus Korarchaeaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:33511
name: Deuterostomia
namespace: ncbi_taxonomy
synonym: "deuterostomes" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:33213 ! Bilateria
relationship: RO:0002162 NCBITaxon:33511 ! Deuterostomia
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:33554
name: Carnivora
namespace: ncbi_taxonomy
synonym: "carnivores" EXACT genbank_common_name []
synonym: "carnivores" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:314145 ! Laurasiatheria
disjoint_from: NCBITaxon:91561 ! Artiodactyla
disjoint_from: NCBITaxon:9397 ! Chiroptera
disjoint_from: NCBITaxon:9787 ! Perissodactyla
relationship: RO:0002162 NCBITaxon:33554 ! Carnivora
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:33630
name: Alveolata
namespace: ncbi_taxonomy
synonym: "alveolates" EXACT genbank_common_name []
synonym: "alveolates" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:2698737 ! Sar
disjoint_from: NCBITaxon:33634 ! Stramenopiles
relationship: RO:0002162 NCBITaxon:33630 ! Alveolata
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:33634
name: Stramenopiles
namespace: ncbi_taxonomy
synonym: "Chromophyta" RELATED in_part []
synonym: "Heterokonta" RELATED synonym []
synonym: "heterokonts" EXACT genbank_common_name []
synonym: "heterokonts" RELATED blast_name []
synonym: "Straminipila" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:2698737 ! Sar
relationship: RO:0002162 NCBITaxon:33634 ! Stramenopiles
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3366610
name: Methanobacteriati
namespace: ncbi_taxonomy
synonym: "Euryarchaeida" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:2157 ! Archaea
relationship: RO:0002162 NCBITaxon:3366610 ! Methanobacteriati
property_value: has_rank NCBITaxon:kingdom
property_value: TAXRANK:1000000 TAXRANK:0000017

[Term]
id: NCBITaxon:33682
name: Euglenozoa
namespace: ncbi_taxonomy
synonym: "Euglenozoans" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:2611352 ! Discoba
relationship: RO:0002162 NCBITaxon:33682 ! Euglenozoa
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:3372
name: Gnetopsida
namespace: ncbi_taxonomy
alt_id: NCBITaxon:58022
synonym: "Chlamydospermopsida" RELATED synonym []
synonym: "Gneticae" RELATED synonym []
synonym: "Gnetophyta" EXACT equivalent_name []
synonym: "gnetophytes" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:1437180 ! Acrogymnospermae
relationship: RO:0002162 NCBITaxon:3372 ! Gnetopsida
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:337687
name: Muroidea
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:15019624
xref: PMID:15371245
is_a: NCBITaxon:1963758 ! Myomorpha
relationship: RO:0002162 NCBITaxon:337687 ! Muroidea
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3378
name: Gnetales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1445966 ! Gnetidae
relationship: RO:0002162 NCBITaxon:3378 ! Gnetales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3379134
name: Pseudomonadati
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:2 ! Bacteria
disjoint_from: NCBITaxon:3384189 ! Fusobacteriati
disjoint_from: NCBITaxon:3384194 ! Thermotogati
relationship: RO:0002162 NCBITaxon:3379134 ! Pseudomonadati
property_value: has_rank NCBITaxon:kingdom
property_value: TAXRANK:1000000 TAXRANK:0000017

[Term]
id: NCBITaxon:338
name: Xanthomonas
namespace: ncbi_taxonomy
synonym: "\"Phytomonas\" Bergey et al. 1923" RELATED synonym []
xref: GC_ID:11
xref: PMID:10758874
xref: PMID:11931143
xref: PMID:18048743
xref: PMID:21984675
xref: PMID:2275852
xref: PMID:9103617
is_a: NCBITaxon:32033 ! Lysobacteraceae
relationship: RO:0002162 NCBITaxon:338 ! Xanthomonas
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:338152
name: Felinae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:338151
synonym: "Acinonychinae" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:9681 ! Felidae
relationship: RO:0002162 NCBITaxon:338152 ! Felinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:338190
name: Nitrosopumilaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:16177789
xref: PMID:29034851
is_a: NCBITaxon:31932 ! Nitrosopumilales
relationship: RO:0002162 NCBITaxon:338190 ! Nitrosopumilaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:338191
name: Nitrosopumilus
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:16177789
xref: PMID:29034851
is_a: NCBITaxon:338190 ! Nitrosopumilaceae
relationship: RO:0002162 NCBITaxon:338191 ! Nitrosopumilus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:338192
name: Nitrosopumilus maritimus
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:16177789
xref: PMID:29034851
is_a: NCBITaxon:338191 ! Nitrosopumilus
relationship: RO:0002162 NCBITaxon:338192 ! Nitrosopumilus maritimus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:33825
name: Peniculida
namespace: ncbi_taxonomy
synonym: "Peniculia" RELATED synonym []
xref: GC_ID:6
is_a: NCBITaxon:6020 ! Oligohymenophorea
relationship: RO:0002162 NCBITaxon:33825 ! Peniculida
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:33836
name: Coscinodiscophyceae
namespace: ncbi_taxonomy
synonym: "centric diatoms" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:2836 ! Bacillariophyta
relationship: RO:0002162 NCBITaxon:33836 ! Coscinodiscophyceae
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:3384189
name: Fusobacteriati
namespace: ncbi_taxonomy
synonym: "Fusobacterida" RELATED synonym []
xref: GC_ID:11
xref: PMID:18988685
is_a: NCBITaxon:2 ! Bacteria
disjoint_from: NCBITaxon:3384194 ! Thermotogati
relationship: RO:0002162 NCBITaxon:3384189 ! Fusobacteriati
property_value: has_rank NCBITaxon:kingdom
property_value: TAXRANK:1000000 TAXRANK:0000017

[Term]
id: NCBITaxon:3384194
name: Thermotogati
namespace: ncbi_taxonomy
synonym: "Thermotogida" RELATED synonym []
xref: GC_ID:11
xref: PMID:18988685
is_a: NCBITaxon:2 ! Bacteria
relationship: RO:0002162 NCBITaxon:3384194 ! Thermotogati
property_value: has_rank NCBITaxon:kingdom
property_value: TAXRANK:1000000 TAXRANK:0000017

[Term]
id: NCBITaxon:33846
name: Thalassiosirophycidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33836 ! Coscinodiscophyceae
relationship: RO:0002162 NCBITaxon:33846 ! Thalassiosirophycidae
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:33847
name: Thalassiosirales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33846 ! Thalassiosirophycidae
relationship: RO:0002162 NCBITaxon:33847 ! Thalassiosirales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:339
name: Xanthomonas campestris
namespace: ncbi_taxonomy
synonym: "Achromobacter lunatus" RELATED synonym []
synonym: "Bacillus campestris" RELATED synonym []
synonym: "Bacterium campestre" RELATED synonym []
synonym: "Phytomonas campestris" RELATED synonym []
synonym: "Pseudomonas campestris" RELATED synonym []
synonym: "Xanthomonas campestris var. aberrans" RELATED synonym []
synonym: "Xanthomonas campestris var. armoraceae" RELATED synonym []
xref: GC_ID:11
xref: PMID:10758892
xref: PMID:2275852
is_a: NCBITaxon:338 ! Xanthomonas
relationship: RO:0002162 NCBITaxon:339 ! Xanthomonas campestris
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:3398
name: Magnoliopsida
namespace: ncbi_taxonomy
synonym: "Angiospermae" RELATED synonym []
synonym: "angiosperms" EXACT OMO:0003003 []
synonym: "flowering plants" EXACT genbank_common_name []
synonym: "flowering plants" RELATED blast_name []
synonym: "Magnoliophyta" RELATED synonym []
xref: GC_ID:1
xref: PMID:25249442
is_a: NCBITaxon:58024 ! Spermatophyta
relationship: RO:0002162 NCBITaxon:3398 ! Magnoliopsida
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:340
name: Xanthomonas campestris pv. campestris
namespace: ncbi_taxonomy
synonym: "Xanthomonas campestris (pv. campestris)" EXACT equivalent_name []
synonym: "Xanthomonas campestris campestris" EXACT equivalent_name []
xref: GC_ID:11
is_a: NCBITaxon:339 ! Xanthomonas campestris
relationship: RO:0002162 NCBITaxon:340 ! Xanthomonas campestris pv. campestris

[Term]
id: NCBITaxon:340080
name: Parameciidae
namespace: ncbi_taxonomy
xref: GC_ID:6
is_a: NCBITaxon:33825 ! Peniculida
relationship: RO:0002162 NCBITaxon:340080 ! Parameciidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:3418804
name: Peronosporomycetes
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4762 ! Oomycota
relationship: RO:0002162 NCBITaxon:3418804 ! Peronosporomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:34346
name: Schizosaccharomycetales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147554 ! Schizosaccharomycetes
relationship: RO:0002162 NCBITaxon:34346 ! Schizosaccharomycetales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3502
name: Fagales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:16713
alt_id: NCBITaxon:29741
alt_id: NCBITaxon:3519
xref: GC_ID:1
is_a: NCBITaxon:91835 ! fabids
disjoint_from: NCBITaxon:3646 ! Malpighiales
disjoint_from: NCBITaxon:3744 ! Rosales
disjoint_from: NCBITaxon:71239 ! Cucurbitales
disjoint_from: NCBITaxon:72025 ! Fabales
relationship: RO:0002162 NCBITaxon:3502 ! Fagales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:35127
name: Thalassiosira
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:29202 ! Thalassiosiraceae
relationship: RO:0002162 NCBITaxon:35127 ! Thalassiosira
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:35128
name: Thalassiosira pseudonana
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:35127 ! Thalassiosira
relationship: RO:0002162 NCBITaxon:35128 ! Thalassiosira pseudonana
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:3524
name: Caryophyllales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3614
alt_id: NCBITaxon:4352
alt_id: NCBITaxon:63764
synonym: "Centrospermae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1437201 ! Pentapetalae
disjoint_from: NCBITaxon:71274 ! asterids
disjoint_from: NCBITaxon:71275 ! rosids
relationship: RO:0002162 NCBITaxon:3524 ! Caryophyllales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:35493
name: Streptophyta
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33090 ! Viridiplantae
relationship: RO:0002162 NCBITaxon:35493 ! Streptophyta
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:35497
name: Suina
namespace: ncbi_taxonomy
synonym: "Suiformes" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:91561 ! Artiodactyla
disjoint_from: NCBITaxon:9845 ! Ruminantia
relationship: RO:0002162 NCBITaxon:35497 ! Suina
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:35500
name: Pecora
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9845 ! Ruminantia
relationship: RO:0002162 NCBITaxon:35500 ! Pecora
property_value: has_rank NCBITaxon:infraorder
property_value: TAXRANK:1000000 TAXRANK:0000013

[Term]
id: NCBITaxon:35554
name: Geobacter sulfurreducens
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:7527204
is_a: NCBITaxon:28231 ! Geobacter
relationship: RO:0002162 NCBITaxon:35554 ! Geobacter sulfurreducens
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:356
name: Hyphomicrobiales
namespace: ncbi_taxonomy
synonym: "alpha-2 proteobacteria" RELATED in_part []
synonym: "rhizobacteria" RELATED synonym []
synonym: "Rhizobiales" RELATED synonym []
xref: GC_ID:11
xref: PMID:1854635
is_a: NCBITaxon:28211 ! Alphaproteobacteria
relationship: RO:0002162 NCBITaxon:356 ! Hyphomicrobiales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3561
name: Spinacia
namespace: ncbi_taxonomy
synonym: "Spinacea" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1307775 ! Anserineae
relationship: RO:0002162 NCBITaxon:3561 ! Spinacia
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3562
name: Spinacia oleracea
namespace: ncbi_taxonomy
synonym: "Spinacea oleracea" EXACT equivalent_name []
synonym: "spinach" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:3561 ! Spinacia
relationship: RO:0002162 NCBITaxon:3562 ! Spinacia oleracea
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:3563
name: Amaranthaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1804623
alt_id: NCBITaxon:3549
synonym: "amaranth family" EXACT genbank_common_name []
synonym: "Chenopodiaceae" RELATED synonym []
synonym: "goosefoot family" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:3524 ! Caryophyllales
relationship: RO:0002162 NCBITaxon:3563 ! Amaranthaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:359160
name: BOP clade
namespace: ncbi_taxonomy
synonym: "BEP clade" EXACT equivalent_name []
xref: GC_ID:1
is_a: NCBITaxon:4479 ! Poaceae
relationship: RO:0002162 NCBITaxon:359160 ! BOP clade
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3602
name: Vitaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:39206
synonym: "grape family" EXACT OMO:0003003 []
synonym: "Vitidaceae" EXACT equivalent_name []
xref: GC_ID:1
is_a: NCBITaxon:403667 ! Vitales
relationship: RO:0002162 NCBITaxon:3602 ! Vitaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:3603
name: Vitis
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2304100 ! Viteae
relationship: RO:0002162 NCBITaxon:3603 ! Vitis
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3629
name: Malvaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3639
alt_id: NCBITaxon:45192
alt_id: NCBITaxon:45323
synonym: "mallow family" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:41938 ! Malvales
relationship: RO:0002162 NCBITaxon:3629 ! Malvaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:36329
name: Plasmodium falciparum 3D7
namespace: ncbi_taxonomy
synonym: "Plasmodium falciparum (isolate 3D7)" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:5833 ! Plasmodium falciparum
relationship: RO:0002162 NCBITaxon:36329 ! Plasmodium falciparum 3D7
property_value: has_rank NCBITaxon:isolate
property_value: TAXRANK:1000000 TAXRANK:0001002

[Term]
id: NCBITaxon:3633
name: Gossypium
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:214907 ! Malvoideae
relationship: RO:0002162 NCBITaxon:3633 ! Gossypium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3635
name: Gossypium hirsutum
namespace: ncbi_taxonomy
synonym: "American cotton" EXACT OMO:0003003 []
synonym: "American upland cotton" EXACT OMO:0003003 []
synonym: "cotton" EXACT genbank_common_name []
synonym: "Gossypium hirsutum subsp. mexicanum" RELATED synonym []
synonym: "Gossypium lanceolatum" RELATED synonym []
synonym: "Gossypium purpurascens" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:3633 ! Gossypium
relationship: RO:0002162 NCBITaxon:3635 ! Gossypium hirsutum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:3640
name: Theobroma
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:214909 ! Byttnerioideae
relationship: RO:0002162 NCBITaxon:3640 ! Theobroma
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3641
name: Theobroma cacao
namespace: ncbi_taxonomy
synonym: "cacao" EXACT genbank_common_name []
synonym: "chocolate" EXACT OMO:0003003 []
synonym: "cocoa" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:3640 ! Theobroma
relationship: RO:0002162 NCBITaxon:3641 ! Theobroma cacao
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:3646
name: Malpighiales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3976
alt_id: NCBITaxon:40028
alt_id: NCBITaxon:4003
alt_id: NCBITaxon:4333
alt_id: NCBITaxon:4385
synonym: "Violales" RELATED in_part []
synonym: "Violanae" RELATED in_part []
xref: GC_ID:1
xref: PMID:23045684
is_a: NCBITaxon:91835 ! fabids
disjoint_from: NCBITaxon:3744 ! Rosales
disjoint_from: NCBITaxon:71239 ! Cucurbitales
disjoint_from: NCBITaxon:72025 ! Fabales
relationship: RO:0002162 NCBITaxon:3646 ! Malpighiales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3650
name: Cucurbitaceae
namespace: ncbi_taxonomy
synonym: "cucumber family" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:71239 ! Cucurbitales
relationship: RO:0002162 NCBITaxon:3650 ! Cucurbitaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:3655
name: Cucumis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:386128
alt_id: NCBITaxon:386160
alt_id: NCBITaxon:386198
alt_id: NCBITaxon:388298
synonym: "Dicoelospermum" RELATED synonym []
synonym: "Mukia" RELATED synonym []
synonym: "Myrmecosicyos" RELATED synonym []
synonym: "Oreosyce" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1003877 ! Benincaseae
relationship: RO:0002162 NCBITaxon:3655 ! Cucumis
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3659
name: Cucumis sativus
namespace: ncbi_taxonomy
synonym: "cucumber" EXACT genbank_common_name []
synonym: "cucumbers" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:3655 ! Cucumis
relationship: RO:0002162 NCBITaxon:3659 ! Cucumis sativus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:367110
name: Neurospora crassa OR74A
namespace: ncbi_taxonomy
alt_id: NCBITaxon:284814
alt_id: NCBITaxon:948871
synonym: "Neurospora crassa 74-OR23-1V A" EXACT equivalent_name []
synonym: "Neurospora crassa 74-OR23-1VA" EXACT equivalent_name []
synonym: "Neurospora crassa FGSC 2489" EXACT equivalent_name []
synonym: "Neurospora crassa FGSC 9013" EXACT equivalent_name []
synonym: "Neurospora crassa N150" EXACT equivalent_name []
xref: GC_ID:1
is_a: NCBITaxon:5141 ! Neurospora crassa
relationship: RO:0002162 NCBITaxon:367110 ! Neurospora crassa OR74A
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:36826
name: Clostridium botulinum A
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:8863443
is_a: NCBITaxon:1491 ! Clostridium botulinum
relationship: RO:0002162 NCBITaxon:36826 ! Clostridium botulinum A

[Term]
id: NCBITaxon:3688
name: Salicaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:124995
alt_id: NCBITaxon:238077
alt_id: NCBITaxon:45162
synonym: "Flacourtiaceae" RELATED in_part []
synonym: "Scyphostegiaceae" RELATED synonym []
synonym: "Scyphostegieae" RELATED synonym []
synonym: "willow family" EXACT OMO:0003003 []
xref: GC_ID:1
xref: PMID:23045684
is_a: NCBITaxon:3646 ! Malpighiales
disjoint_from: NCBITaxon:3977 ! Euphorbiaceae
relationship: RO:0002162 NCBITaxon:3688 ! Salicaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:3689
name: Populus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:36505
synonym: "poplar" EXACT OMO:0003003 []
synonym: "poplar trees" EXACT OMO:0003003 []
synonym: "poplars" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:238069 ! Saliceae
relationship: RO:0002162 NCBITaxon:3689 ! Populus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3691983
name: Clostridium botulinum group
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:1485 ! Clostridium
relationship: RO:0002162 NCBITaxon:3691983 ! Clostridium botulinum group
property_value: has_rank species_group
property_value: TAXRANK:1000000 TAXRANK:0000010

[Term]
id: NCBITaxon:3694
name: Populus trichocarpa
namespace: ncbi_taxonomy
synonym: "black cottonwood" EXACT genbank_common_name []
synonym: "Populus balsamifera subsp. trichocarpa" RELATED synonym []
synonym: "western balsam poplar" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:3689 ! Populus
relationship: RO:0002162 NCBITaxon:3694 ! Populus trichocarpa
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:3699
name: Brassicales
namespace: ncbi_taxonomy
synonym: "Capparales" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:91836 ! malvids
disjoint_from: NCBITaxon:41937 ! Sapindales
disjoint_from: NCBITaxon:41938 ! Malvales
disjoint_from: NCBITaxon:41944 ! Myrtales
relationship: RO:0002162 NCBITaxon:3699 ! Brassicales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3700
name: Brassicaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:25773
synonym: "Cruciferae" EXACT equivalent_name []
synonym: "mustard family" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:3699 ! Brassicales
relationship: RO:0002162 NCBITaxon:3700 ! Brassicaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:3701
name: Arabidopsis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:45250
synonym: "Cardaminopsis" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:980083 ! Camelineae
relationship: RO:0002162 NCBITaxon:3701 ! Arabidopsis
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3701028
name: Altocrustacea
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2172815
alt_id: NCBITaxon:2172821
alt_id: NCBITaxon:72037
xref: GC_ID:1
is_a: NCBITaxon:197562 ! Pancrustacea
relationship: RO:0002162 NCBITaxon:3701028 ! Altocrustacea
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3701030
name: Allotriocarida
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3701028 ! Altocrustacea
relationship: RO:0002162 NCBITaxon:3701030 ! Allotriocarida
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3701061
name: Eumetabola
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33340 ! Neoptera
relationship: RO:0002162 NCBITaxon:3701061 ! Eumetabola
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3701062
name: Aparaglossata
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33392 ! Endopterygota
relationship: RO:0002162 NCBITaxon:3701062 ! Aparaglossata
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3701063
name: Panorpida
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3701062 ! Aparaglossata
disjoint_from: NCBITaxon:3701064 ! Neuropteroidea
relationship: RO:0002162 NCBITaxon:3701063 ! Panorpida
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3701064
name: Neuropteroidea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3701062 ! Aparaglossata
relationship: RO:0002162 NCBITaxon:3701064 ! Neuropteroidea
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3702
name: Arabidopsis thaliana
namespace: ncbi_taxonomy
synonym: "Arabis thaliana" RELATED synonym []
synonym: "mouse-ear cress" EXACT OMO:0003003 []
synonym: "thale cress" EXACT genbank_common_name []
synonym: "thale-cress" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:3701 ! Arabidopsis
relationship: RO:0002162 NCBITaxon:3702 ! Arabidopsis thaliana
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:3705
name: Brassica
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:981071 ! Brassiceae
relationship: RO:0002162 NCBITaxon:3705 ! Brassica
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3705317
name: chytridiomyceta
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:112252 ! Fungi incertae sedis
relationship: RO:0002162 NCBITaxon:3705317 ! chytridiomyceta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:3705883
name: Chytridiomycotina
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4761 ! Chytridiomycota
relationship: RO:0002162 NCBITaxon:3705883 ! Chytridiomycotina
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:3708
name: Brassica napus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:36503
synonym: "oilseed rape" EXACT OMO:0003003 []
synonym: "rape" EXACT genbank_common_name []
synonym: "rapeseeds" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:3705 ! Brassica
disjoint_from: NCBITaxon:3711 ! Brassica rapa
relationship: RO:0002162 NCBITaxon:3708 ! Brassica napus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:37104
name: Trichomonadida
namespace: ncbi_taxonomy
synonym: "trichomonads" EXACT genbank_common_name []
synonym: "trichomonads" RELATED blast_name []
xref: GC_ID:1
xref: PMID:20093080
is_a: NCBITaxon:5719 ! Parabasalia
relationship: RO:0002162 NCBITaxon:37104 ! Trichomonadida
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3711
name: Brassica rapa
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3706
synonym: "field mustard" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:3705 ! Brassica
relationship: RO:0002162 NCBITaxon:3711 ! Brassica rapa
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:374
name: Bradyrhizobium
namespace: ncbi_taxonomy
alt_id: NCBITaxon:44254
synonym: "Agromonas" RELATED synonym []
xref: GC_ID:11
xref: PMID:10758890
xref: PMID:10826808
xref: PMID:10843061
xref: PMID:11155993
xref: PMID:11211247
xref: PMID:11321108
xref: PMID:11491327
xref: PMID:11760945
xref: PMID:6651288
xref: PMID:7520731
xref: PMID:8494742
xref: PMID:9336911
is_a: NCBITaxon:41294 ! Nitrobacteraceae
relationship: RO:0002162 NCBITaxon:374 ! Bradyrhizobium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:37414
name: Physcomitrium
namespace: ncbi_taxonomy
alt_id: NCBITaxon:130305
alt_id: NCBITaxon:3217
synonym: "Aphanorrhegma" RELATED synonym []
synonym: "Gymnostomum subgen. Physcomitrium" RELATED synonym []
synonym: "Physcomitrella" RELATED synonym []
xref: GC_ID:1
xref: PMID:25015729
is_a: NCBITaxon:3216 ! Funariaceae
relationship: RO:0002162 NCBITaxon:37414 ! Physcomitrium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3744
name: Rosales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3473
alt_id: NCBITaxon:3601
alt_id: NCBITaxon:4266
xref: GC_ID:1
is_a: NCBITaxon:91835 ! fabids
disjoint_from: NCBITaxon:71239 ! Cucurbitales
disjoint_from: NCBITaxon:72025 ! Fabales
relationship: RO:0002162 NCBITaxon:3744 ! Rosales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3745
name: Rosaceae
namespace: ncbi_taxonomy
synonym: "Malaceae" RELATED synonym []
synonym: "rose family" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:3744 ! Rosales
relationship: RO:0002162 NCBITaxon:3745 ! Rosaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:374847
name: Candidatus Korarchaeum cryptofilum OPF8
namespace: ncbi_taxonomy
synonym: "Candidatus Korarchaeum cryptofilum str. OPF8" EXACT equivalent_name []
synonym: "Candidatus Korarchaeum cryptofilum strain OPF8" EXACT equivalent_name []
synonym: "korarchaeote OPF1-KOR" RELATED synonym []
synonym: "Korarchaeum cryptofilum OPF8" RELATED synonym []
xref: GC_ID:11
xref: PMID:18535141
is_a: NCBITaxon:498846 ! Candidatus Korarchaeum cryptofilum
relationship: RO:0002162 NCBITaxon:374847 ! Candidatus Korarchaeum cryptofilum OPF8
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:3754
name: Prunus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:140650
alt_id: NCBITaxon:203800
synonym: "Amygdalus" RELATED synonym []
synonym: "Armeniaca" RELATED synonym []
synonym: "Cerasus" RELATED synonym []
synonym: "Maddenia" RELATED synonym []
synonym: "Prunus subg. Amygdalus" RELATED synonym []
synonym: "Prunus subg. Armeniaca" RELATED synonym []
xref: GC_ID:1
xref: PMID:24631854
is_a: NCBITaxon:721805 ! Amygdaleae
relationship: RO:0002162 NCBITaxon:3754 ! Prunus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3760
name: Prunus persica
namespace: ncbi_taxonomy
alt_id: NCBITaxon:203801
synonym: "Amygdalus persica" RELATED synonym []
synonym: "peach" EXACT genbank_common_name []
synonym: "Persica vulgaris" RELATED synonym []
synonym: "Prunus persica var. densa" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:3754 ! Prunus
relationship: RO:0002162 NCBITaxon:3760 ! Prunus persica
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:376913
name: Haplorrhini
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9443 ! Primates
relationship: RO:0002162 NCBITaxon:376913 ! Haplorrhini
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:379583
name: Feliformia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33554 ! Carnivora
disjoint_from: NCBITaxon:379584 ! Caniformia
relationship: RO:0002162 NCBITaxon:379583 ! Feliformia
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:379584
name: Caniformia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33554 ! Carnivora
relationship: RO:0002162 NCBITaxon:379584 ! Caniformia
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:3803
name: Fabaceae
namespace: ncbi_taxonomy
synonym: "Leguminosae" RELATED synonym []
synonym: "pea family" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:72025 ! Fabales
relationship: RO:0002162 NCBITaxon:3803 ! Fabaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:3814
name: Papilionoideae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:24958
synonym: "Faboideae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:3803 ! Fabaceae
relationship: RO:0002162 NCBITaxon:3814 ! Papilionoideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:38254
name: Glaucocystophyceae
namespace: ncbi_taxonomy
synonym: "algae" RELATED in_part []
synonym: "glaucocystophytes" EXACT OMO:0003003 []
synonym: "Glaucophyceae" RELATED synonym []
synonym: "Glaucophyta" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:2759 ! Eukaryota
disjoint_from: NCBITaxon:554915 ! Amoebozoa
relationship: RO:0002162 NCBITaxon:38254 ! Glaucocystophyceae
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:3846
name: Glycine
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:163735 ! Phaseoleae
relationship: RO:0002162 NCBITaxon:3846 ! Glycine
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3847
name: Glycine max
namespace: ncbi_taxonomy
synonym: "Phaseolus max" RELATED synonym []
synonym: "soybean" EXACT genbank_common_name []
synonym: "soybeans" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:1462606 ! Glycine subgen. Soja
relationship: RO:0002162 NCBITaxon:3847 ! Glycine max
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:38568
name: Leishmania <subgenus>
namespace: ncbi_taxonomy
synonym: "Leishmania" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:5658 ! Leishmania <genus>
relationship: RO:0002162 NCBITaxon:38568 ! Leishmania <subgenus>
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:38581
name: Leishmania major species complex
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:38568 ! Leishmania <subgenus>
relationship: RO:0002162 NCBITaxon:38581 ! Leishmania major species complex
property_value: has_rank species_group
property_value: TAXRANK:1000000 TAXRANK:0000010

[Term]
id: NCBITaxon:38605
name: Didelphimorphia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9263 ! Metatheria
relationship: RO:0002162 NCBITaxon:38605 ! Didelphimorphia
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:3877
name: Medicago
namespace: ncbi_taxonomy
synonym: "medics" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:163742 ! Trifolieae
relationship: RO:0002162 NCBITaxon:3877 ! Medicago
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3880
name: Medicago truncatula
namespace: ncbi_taxonomy
synonym: "barrel medic" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:3877 ! Medicago
relationship: RO:0002162 NCBITaxon:3880 ! Medicago truncatula
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:38820
name: Poales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:4478
alt_id: NCBITaxon:4727
xref: GC_ID:1
xref: PMID:26350789
is_a: NCBITaxon:4734 ! commelinids
disjoint_from: NCBITaxon:40551 ! Arecales
disjoint_from: NCBITaxon:4618 ! Zingiberales
relationship: RO:0002162 NCBITaxon:38820 ! Poales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:39107
name: Murinae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:109679
xref: GC_ID:1
is_a: NCBITaxon:10066 ! Muridae
relationship: RO:0002162 NCBITaxon:39107 ! Murinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:3931
name: Myrtaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:40013
alt_id: NCBITaxon:40025
synonym: "Heteropyxidaceae" RELATED synonym []
synonym: "myrtle family" EXACT OMO:0003003 []
synonym: "Psiloxylaceae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:41944 ! Myrtales
relationship: RO:0002162 NCBITaxon:3931 ! Myrtaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:3932
name: Eucalyptus
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1699524 ! Eucalypteae
relationship: RO:0002162 NCBITaxon:3932 ! Eucalyptus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:39700
name: Trypanozoon
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5690 ! Trypanosoma
disjoint_from: NCBITaxon:47570 ! Schizotrypanum
relationship: RO:0002162 NCBITaxon:39700 ! Trypanozoon
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:3977
name: Euphorbiaceae
namespace: ncbi_taxonomy
synonym: "spurge family" EXACT OMO:0003003 []
xref: GC_ID:1
xref: PMID:23045684
is_a: NCBITaxon:3646 ! Malpighiales
relationship: RO:0002162 NCBITaxon:3977 ! Euphorbiaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:3982
name: Manihot
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:235883 ! Manihoteae
relationship: RO:0002162 NCBITaxon:3982 ! Manihot
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3983
name: Manihot esculenta
namespace: ncbi_taxonomy
alt_id: NCBITaxon:109657
synonym: "cassava" EXACT genbank_common_name []
synonym: "Manihot utilissima" RELATED synonym []
synonym: "manioc" EXACT OMO:0003003 []
synonym: "tapioca" EXACT OMO:0003003 []
synonym: "yuca" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:3982 ! Manihot
relationship: RO:0002162 NCBITaxon:3983 ! Manihot esculenta
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:3987
name: Ricinus <eudicots>
namespace: ncbi_taxonomy
synonym: "Ricinus" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:235880 ! Acalypheae
relationship: RO:0002162 NCBITaxon:3987 ! Ricinus <eudicots>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:3988
name: Ricinus communis
namespace: ncbi_taxonomy
synonym: "castor bean" EXACT genbank_common_name []
synonym: "Ricinus sanguineus" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:3987 ! Ricinus <eudicots>
relationship: RO:0002162 NCBITaxon:3988 ! Ricinus communis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:39947
name: Oryza sativa Japonica Group
namespace: ncbi_taxonomy
synonym: "Japanese rice" EXACT genbank_common_name []
synonym: "Japonica rice" EXACT OMO:0003003 []
synonym: "Oryza sativa (japonica cultivar-group)" RELATED synonym []
synonym: "Oryza sativa subsp. japonica" RELATED synonym []
xref: GC_ID:1
xref: PMID:15654106
xref: PMID:17617555
xref: PMID:17907810
xref: PMID:19706531
is_a: NCBITaxon:4530 ! Oryza sativa
relationship: RO:0002162 NCBITaxon:39947 ! Oryza sativa Japonica Group

[Term]
id: NCBITaxon:40117
name: Nitrospirota
namespace: ncbi_taxonomy
synonym: "Nitrospira group" RELATED synonym []
synonym: "Nitrospirae" RELATED synonym []
synonym: "Nitrospiraeota" RELATED synonym []
synonym: "Nitrospirota corrig. Garrity and Holt 2021" RELATED synonym []
synonym: "Thermodesulfovibrio group" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:3379134 ! Pseudomonadati
disjoint_from: NCBITaxon:68297 ! Dictyoglomota
relationship: RO:0002162 NCBITaxon:40117 ! Nitrospirota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:403667
name: Vitales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:91834 ! rosids incertae sedis
relationship: RO:0002162 NCBITaxon:403667 ! Vitales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:40410
name: Cryptococcus deneoformans
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1296041
alt_id: NCBITaxon:1296042
alt_id: NCBITaxon:1296043
alt_id: NCBITaxon:135857
alt_id: NCBITaxon:1859123
synonym: "Cryptococcus neoformans serotype D" EXACT OMO:0003003 []
synonym: "Cryptococcus neoformans var. neoformans" RELATED synonym []
synonym: "Filobasidiella neoformans var. neoformans" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1897064 ! Cryptococcus neoformans species complex
relationship: RO:0002162 NCBITaxon:40410 ! Cryptococcus deneoformans
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:404260
name: Bryophytina
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3208 ! Bryophyta
relationship: RO:0002162 NCBITaxon:404260 ! Bryophytina
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:40551
name: Arecales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:4709
synonym: "Areciflorae" RELATED in_part []
xref: GC_ID:1
xref: PMID:26350789
is_a: NCBITaxon:4734 ! commelinids
disjoint_from: NCBITaxon:4618 ! Zingiberales
relationship: RO:0002162 NCBITaxon:40551 ! Arecales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:40674
name: Mammalia
namespace: ncbi_taxonomy
synonym: "mammals" EXACT genbank_common_name []
synonym: "mammals" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:32524 ! Amniota
disjoint_from: NCBITaxon:8457 ! Sauropsida
relationship: RO:0002162 NCBITaxon:40674 ! Mammalia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:4069
name: Solanales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:41936
synonym: "Solananae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:91888 ! lamiids
disjoint_from: NCBITaxon:4143 ! Lamiales
relationship: RO:0002162 NCBITaxon:4069 ! Solanales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:4070
name: Solanaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:40319
synonym: "nightshade family" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:4069 ! Solanales
relationship: RO:0002162 NCBITaxon:4070 ! Solanaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:4071
name: Capsicum
namespace: ncbi_taxonomy
synonym: "peppers" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:424564 ! Capsiceae
relationship: RO:0002162 NCBITaxon:4071 ! Capsicum
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4072
name: Capsicum annuum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1380866
alt_id: NCBITaxon:654590
synonym: "sweet pepper" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:4071 ! Capsicum
relationship: RO:0002162 NCBITaxon:4072 ! Capsicum annuum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4081
name: Solanum lycopersicum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:195582
synonym: "Lycopersicon esculentum" RELATED synonym []
synonym: "Lycopersicon esculentum var. esculentum" RELATED synonym []
synonym: "Solanum esculentum" RELATED synonym []
synonym: "Solanum lycopersicum var. humboldtii" RELATED synonym []
synonym: "tomato" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:49274 ! Solanum subgen. Lycopersicon
relationship: RO:0002162 NCBITaxon:4081 ! Solanum lycopersicum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4085
name: Nicotiana
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:424562 ! Nicotianeae
relationship: RO:0002162 NCBITaxon:4085 ! Nicotiana
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4097
name: Nicotiana tabacum
namespace: ncbi_taxonomy
synonym: "American tobacco" EXACT OMO:0003003 []
synonym: "common tobacco" EXACT genbank_common_name []
synonym: "tobacco" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:4085 ! Nicotiana
relationship: RO:0002162 NCBITaxon:4097 ! Nicotiana tabacum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4107
name: Solanum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:115650
alt_id: NCBITaxon:115658
alt_id: NCBITaxon:4080
alt_id: NCBITaxon:49275
synonym: "Cyphomandra" RELATED synonym []
synonym: "Normania" RELATED synonym []
synonym: "Triguera" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:424574 ! Solaneae
relationship: RO:0002162 NCBITaxon:4107 ! Solanum
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:41084
name: Polyphaga <beetles>
namespace: ncbi_taxonomy
synonym: "Polyphaga" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:7041 ! Coleoptera
relationship: RO:0002162 NCBITaxon:41084 ! Polyphaga <beetles>
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:41087
name: Elateriformia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:41084 ! Polyphaga <beetles>
disjoint_from: NCBITaxon:41088 ! Cucujiformia
relationship: RO:0002162 NCBITaxon:41087 ! Elateriformia
property_value: has_rank NCBITaxon:infraorder
property_value: TAXRANK:1000000 TAXRANK:0000013

[Term]
id: NCBITaxon:41088
name: Cucujiformia
namespace: ncbi_taxonomy
alt_id: NCBITaxon:41089
xref: GC_ID:1
is_a: NCBITaxon:41084 ! Polyphaga <beetles>
relationship: RO:0002162 NCBITaxon:41088 ! Cucujiformia
property_value: has_rank NCBITaxon:infraorder
property_value: TAXRANK:1000000 TAXRANK:0000013

[Term]
id: NCBITaxon:4113
name: Solanum tuberosum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:90692
synonym: "potato" EXACT genbank_common_name []
synonym: "potatoes" EXACT OMO:0003003 []
synonym: "Solanum aracc-papa" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4107 ! Solanum
disjoint_from: NCBITaxon:49274 ! Solanum subgen. Lycopersicon
relationship: RO:0002162 NCBITaxon:4113 ! Solanum tuberosum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:41294
name: Nitrobacteraceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:910
synonym: "alpha-2 proteobacteria" RELATED in_part []
synonym: "BANA domain" RELATED synonym []
synonym: "Bradyrhizobiaceae" RELATED synonym []
synonym: "Bradyrhizobiaceae Garrity et al. 2006" RELATED synonym []
synonym: "Bradyrhizobium group" RELATED synonym []
xref: GC_ID:11
xref: PMID:1854635
xref: PMID:7520737
is_a: NCBITaxon:356 ! Hyphomicrobiales
relationship: RO:0002162 NCBITaxon:41294 ! Nitrobacteraceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:41399
name: Phrymaceae
namespace: ncbi_taxonomy
synonym: "Phrymataceae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4143 ! Lamiales
relationship: RO:0002162 NCBITaxon:41399 ! Phrymaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:4143
name: Lamiales
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:12144762
is_a: NCBITaxon:91888 ! lamiids
relationship: RO:0002162 NCBITaxon:4143 ! Lamiales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:4155
name: Erythranthe guttata
namespace: ncbi_taxonomy
alt_id: NCBITaxon:528319
synonym: "common monkey flower" EXACT OMO:0003003 []
synonym: "Mimulus guttatus" RELATED synonym []
synonym: "Mimulus guttatus subsp. guttatus" RELATED synonym []
synonym: "spotted monkey flower" EXACT genbank_common_name []
synonym: "yellow monkey flower" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:1502711 ! Erythranthe
relationship: RO:0002162 NCBITaxon:4155 ! Erythranthe guttata
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:41665
name: Neopterygii
namespace: ncbi_taxonomy
synonym: "Neopterygi" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:186623 ! Actinopteri
relationship: RO:0002162 NCBITaxon:41665 ! Neopterygii
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:41666
name: Batrachia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:8292 ! Amphibia
relationship: RO:0002162 NCBITaxon:41666 ! Batrachia
property_value: has_rank NCBITaxon:superorder
property_value: TAXRANK:1000000 TAXRANK:0000020

[Term]
id: NCBITaxon:418107
name: Laverania
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5820 ! Plasmodium <genus>
relationship: RO:0002162 NCBITaxon:418107 ! Laverania
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:41827
name: Culicoidea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:43786 ! Culicomorpha
relationship: RO:0002162 NCBITaxon:41827 ! Culicoidea
property_value: has_rank NCBITaxon:superfamily
property_value: TAXRANK:1000000 TAXRANK:0000018

[Term]
id: NCBITaxon:418459
name: Puccinia graminis f. sp. tritici CRL 75-36-700-3
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:56615 ! Puccinia graminis f. sp. tritici
relationship: RO:0002162 NCBITaxon:418459 ! Puccinia graminis f. sp. tritici CRL 75-36-700-3
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:41937
name: Sapindales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:4010
synonym: "Rutanae" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:91836 ! malvids
disjoint_from: NCBITaxon:41938 ! Malvales
disjoint_from: NCBITaxon:41944 ! Myrtales
relationship: RO:0002162 NCBITaxon:41937 ! Sapindales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:41938
name: Malvales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3628
synonym: "Malvanae" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:91836 ! malvids
disjoint_from: NCBITaxon:41944 ! Myrtales
relationship: RO:0002162 NCBITaxon:41938 ! Malvales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:41944
name: Myrtales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3927
synonym: "Myrtanae" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:91836 ! malvids
relationship: RO:0002162 NCBITaxon:41944 ! Myrtales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:4209
name: Asterales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:4380
xref: GC_ID:1
xref: PMID:12144762
is_a: NCBITaxon:91882 ! campanulids
relationship: RO:0002162 NCBITaxon:4209 ! Asterales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:4210
name: Asteraceae
namespace: ncbi_taxonomy
synonym: "Compositae" EXACT equivalent_name []
synonym: "daisy family" EXACT OMO:0003003 []
xref: GC_ID:1
xref: PMID:18375151
is_a: NCBITaxon:4209 ! Asterales
relationship: RO:0002162 NCBITaxon:4210 ! Asteraceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:42113
name: Clitellata
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6340 ! Annelida
relationship: RO:0002162 NCBITaxon:42113 ! Clitellata
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:422676
name: Aconoidasida
namespace: ncbi_taxonomy
synonym: "Hematozoa Vivier 1982" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:5794 ! Apicomplexa
relationship: RO:0002162 NCBITaxon:422676 ! Aconoidasida
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:4231
name: Helianthus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:36497
synonym: "sunflowers" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:102814 ! Heliantheae
relationship: RO:0002162 NCBITaxon:4231 ! Helianthus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4232
name: Helianthus annuus
namespace: ncbi_taxonomy
synonym: "common sunflower" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:4231 ! Helianthus
relationship: RO:0002162 NCBITaxon:4232 ! Helianthus annuus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:42345
name: Phoenix dactylifera
namespace: ncbi_taxonomy
synonym: "date palm" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:4719 ! Phoenix
relationship: RO:0002162 NCBITaxon:42345 ! Phoenix dactylifera
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4235
name: Lactuca
namespace: ncbi_taxonomy
alt_id: NCBITaxon:75959
synonym: "Mycelis" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:745062 ! Lactucinae
relationship: RO:0002162 NCBITaxon:4235 ! Lactuca
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4236
name: Lactuca sativa
namespace: ncbi_taxonomy
synonym: "cultivated lettuce" EXACT OMO:0003003 []
synonym: "garden lettuce" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:4235 ! Lactuca
relationship: RO:0002162 NCBITaxon:4236 ! Lactuca sativa
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:424551
name: Solanoideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4070 ! Solanaceae
disjoint_from: NCBITaxon:424554 ! Nicotianoideae
relationship: RO:0002162 NCBITaxon:424551 ! Solanoideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:424554
name: Nicotianoideae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4070 ! Solanaceae
relationship: RO:0002162 NCBITaxon:424554 ! Nicotianoideae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:424562
name: Nicotianeae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:424554 ! Nicotianoideae
relationship: RO:0002162 NCBITaxon:424562 ! Nicotianeae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:424564
name: Capsiceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:424551 ! Solanoideae
disjoint_from: NCBITaxon:424574 ! Solaneae
relationship: RO:0002162 NCBITaxon:424564 ! Capsiceae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:424574
name: Solaneae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:424551 ! Solanoideae
relationship: RO:0002162 NCBITaxon:424574 ! Solaneae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:426442
name: Ixodinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6939 ! Ixodidae
relationship: RO:0002162 NCBITaxon:426442 ! Ixodinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:431838
name: Intramacronucleata
namespace: ncbi_taxonomy
xref: GC_ID:6
is_a: NCBITaxon:5878 ! Ciliophora
relationship: RO:0002162 NCBITaxon:431838 ! Intramacronucleata
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:436308
name: Nitrosopumilus maritimus SCM1
namespace: ncbi_taxonomy
synonym: "Nitrosopumilus maritimus str. SCM1" EXACT equivalent_name []
synonym: "Nitrosopumilus maritimus strain SCM1" EXACT equivalent_name []
synonym: "Seattle Aquarium strain SCM1" RELATED synonym []
xref: GC_ID:11
xref: PMID:20421470
is_a: NCBITaxon:338192 ! Nitrosopumilus maritimus
relationship: RO:0002162 NCBITaxon:436308 ! Nitrosopumilus maritimus SCM1
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:436486
name: Dinosauria
namespace: ncbi_taxonomy
synonym: "dinosaurs" EXACT genbank_common_name []
synonym: "dinosaurs" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:8492 ! Archosauria
relationship: RO:0002162 NCBITaxon:436486 ! Dinosauria
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:436489
name: Saurischia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:436486 ! Dinosauria
relationship: RO:0002162 NCBITaxon:436489 ! Saurischia
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:436491
name: Theropoda
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:436489 ! Saurischia
relationship: RO:0002162 NCBITaxon:436491 ! Theropoda
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:436492
name: Coelurosauria
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:436491 ! Theropoda
relationship: RO:0002162 NCBITaxon:436492 ! Coelurosauria
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:43733
name: Muscomorpha
namespace: ncbi_taxonomy
alt_id: NCBITaxon:43732
synonym: "Asilomorpha" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:7203 ! Brachycera
relationship: RO:0002162 NCBITaxon:43733 ! Muscomorpha
property_value: has_rank NCBITaxon:infraorder
property_value: TAXRANK:1000000 TAXRANK:0000013

[Term]
id: NCBITaxon:43738
name: Schizophora
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:480117 ! Cyclorrhapha
relationship: RO:0002162 NCBITaxon:43738 ! Schizophora

[Term]
id: NCBITaxon:43741
name: Acalyptratae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:43738 ! Schizophora
relationship: RO:0002162 NCBITaxon:43741 ! Acalyptratae

[Term]
id: NCBITaxon:43746
name: Ephydroidea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:43741 ! Acalyptratae
relationship: RO:0002162 NCBITaxon:43746 ! Ephydroidea
property_value: has_rank NCBITaxon:superfamily
property_value: TAXRANK:1000000 TAXRANK:0000018

[Term]
id: NCBITaxon:43786
name: Culicomorpha
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7148 ! Nematocera
relationship: RO:0002162 NCBITaxon:43786 ! Culicomorpha
property_value: has_rank NCBITaxon:infraorder
property_value: TAXRANK:1000000 TAXRANK:0000013

[Term]
id: NCBITaxon:43816
name: Anophelinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7157 ! Culicidae
relationship: RO:0002162 NCBITaxon:43816 ! Anophelinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:43845
name: Drosophilinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7214 ! Drosophilidae
relationship: RO:0002162 NCBITaxon:43845 ! Drosophilinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:441771
name: Clostridium botulinum A str. Hall
namespace: ncbi_taxonomy
synonym: "Clostridium botulinum A strain Hall" EXACT equivalent_name []
xref: GC_ID:11
is_a: NCBITaxon:36826 ! Clostridium botulinum A
relationship: RO:0002162 NCBITaxon:441771 ! Clostridium botulinum A str. Hall
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:4429
name: Nelumbonaceae
namespace: ncbi_taxonomy
synonym: "lotus family" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:232378 ! Proteales
relationship: RO:0002162 NCBITaxon:4429 ! Nelumbonaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:4430
name: Nelumbo
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4429 ! Nelumbonaceae
relationship: RO:0002162 NCBITaxon:4430 ! Nelumbo
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4432
name: Nelumbo nucifera
namespace: ncbi_taxonomy
synonym: "Indian lotus" EXACT OMO:0003003 []
synonym: "padma" EXACT OMO:0003003 []
synonym: "sacred lotus" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:4430 ! Nelumbo
relationship: RO:0002162 NCBITaxon:4432 ! Nelumbo nucifera
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4447
name: Liliopsida
namespace: ncbi_taxonomy
synonym: "monocots" EXACT genbank_common_name []
synonym: "monocots" RELATED blast_name []
synonym: "Monocotyledoneae" RELATED synonym []
synonym: "monocotyledons" EXACT OMO:0003003 []
xref: GC_ID:1
xref: PMID:25249442
is_a: NCBITaxon:1437183 ! Mesangiospermae
disjoint_from: NCBITaxon:71240 ! eudicotyledons
relationship: RO:0002162 NCBITaxon:4447 ! Liliopsida
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:44534
name: Cellia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7164 ! Anopheles <genus>
relationship: RO:0002162 NCBITaxon:44534 ! Cellia
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:44537
name: Pyretophorus
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:44534 ! Cellia
relationship: RO:0002162 NCBITaxon:44537 ! Pyretophorus
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:44542
name: gambiae species complex
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:44537 ! Pyretophorus
relationship: RO:0002162 NCBITaxon:44542 ! gambiae species complex

[Term]
id: NCBITaxon:44689
name: Dictyostelium discoideum
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5782 ! Dictyostelium
disjoint_from: NCBITaxon:5786 ! Dictyostelium purpureum
relationship: RO:0002162 NCBITaxon:44689 ! Dictyostelium discoideum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4479
name: Poaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1661618
synonym: "Bambusaceae" RELATED synonym []
synonym: "Gramineae" RELATED synonym []
synonym: "grass family" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:38820 ! Poales
relationship: RO:0002162 NCBITaxon:4479 ! Poaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:4512
name: Hordeum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:37869
synonym: "barleys" EXACT OMO:0003003 []
synonym: "Critesion" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1648017 ! Hordeinae
relationship: RO:0002162 NCBITaxon:4512 ! Hordeum
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4513
name: Hordeum vulgare
namespace: ncbi_taxonomy
alt_id: NCBITaxon:36528
synonym: "barley" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:4512 ! Hordeum
relationship: RO:0002162 NCBITaxon:4513 ! Hordeum vulgare
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:451435
name: Chytridiomycetes
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:12684019
xref: PMID:17051209
xref: PMID:17486963
is_a: NCBITaxon:3705883 ! Chytridiomycotina
relationship: RO:0002162 NCBITaxon:451435 ! Chytridiomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:451442
name: Rhizophydiales
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:16919432
xref: PMID:17051209
is_a: NCBITaxon:451435 ! Chytridiomycetes
relationship: RO:0002162 NCBITaxon:451442 ! Rhizophydiales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:451864
name: Dikarya
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:15689432
xref: PMID:16151185
xref: PMID:17010206
xref: PMID:17051209
xref: PMID:17572334
is_a: NCBITaxon:4751 ! Fungi
relationship: RO:0002162 NCBITaxon:451864 ! Dikarya
property_value: has_rank NCBITaxon:subkingdom
property_value: TAXRANK:1000000 TAXRANK:0000029

[Term]
id: NCBITaxon:451866
name: Taphrinomycotina
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4890 ! Ascomycota
disjoint_from: NCBITaxon:716545 ! saccharomyceta
relationship: RO:0002162 NCBITaxon:451866 ! Taphrinomycotina
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:451868
name: Pleosporomycetidae
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:17486979
is_a: NCBITaxon:147541 ! Dothideomycetes
relationship: RO:0002162 NCBITaxon:451868 ! Pleosporomycetidae
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:451871
name: Eurotiomycetidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147545 ! Eurotiomycetes
relationship: RO:0002162 NCBITaxon:451871 ! Eurotiomycetidae
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:4527
name: Oryza
namespace: ncbi_taxonomy
alt_id: NCBITaxon:77587
xref: GC_ID:1
is_a: NCBITaxon:1648021 ! Oryzinae
relationship: RO:0002162 NCBITaxon:4527 ! Oryza
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4530
name: Oryza sativa
namespace: ncbi_taxonomy
alt_id: NCBITaxon:389215
synonym: "Asian cultivated rice" EXACT genbank_common_name []
synonym: "red rice" EXACT OMO:0003003 []
synonym: "rice" EXACT OMO:0003003 []
xref: GC_ID:1
xref: PMID:15654106
xref: PMID:17617555
xref: PMID:17907810
xref: PMID:19706531
is_a: NCBITaxon:4527 ! Oryza
relationship: RO:0002162 NCBITaxon:4530 ! Oryza sativa
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:45349
name: Edwardsiidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6103 ! Actiniaria
relationship: RO:0002162 NCBITaxon:45349 ! Edwardsiidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:45350
name: Nematostella
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:45349 ! Edwardsiidae
relationship: RO:0002162 NCBITaxon:45350 ! Nematostella
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:45351
name: Nematostella vectensis
namespace: ncbi_taxonomy
synonym: "starlet sea anemone" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:45350 ! Nematostella
relationship: RO:0002162 NCBITaxon:45351 ! Nematostella vectensis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4554
name: Setaria <monocots>
namespace: ncbi_taxonomy
synonym: "Setaria" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:1293361 ! Cenchrinae
relationship: RO:0002162 NCBITaxon:4554 ! Setaria <monocots>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4555
name: Setaria italica
namespace: ncbi_taxonomy
alt_id: NCBITaxon:798332
synonym: "Chaetochloa italica" RELATED synonym []
synonym: "foxtail millet" EXACT genbank_common_name []
synonym: "Panicum italicum" RELATED synonym []
synonym: "Pennisetum macrochaetum" RELATED synonym []
synonym: "Setaria viridis subsp. italica" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4554 ! Setaria <monocots>
relationship: RO:0002162 NCBITaxon:4555 ! Setaria italica
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4557
name: Sorghum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1699109
synonym: "Hemisorghum" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1648028 ! Sorghinae
relationship: RO:0002162 NCBITaxon:4557 ! Sorghum
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4558
name: Sorghum bicolor
namespace: ncbi_taxonomy
synonym: "Andropogon sorghum" RELATED synonym []
synonym: "broomcorn" EXACT OMO:0003003 []
synonym: "Holcus bicolor" RELATED synonym []
synonym: "milo" EXACT OMO:0003003 []
synonym: "sorghum" EXACT genbank_common_name []
synonym: "Sorghum bicolor subsp. bicolor" RELATED synonym []
synonym: "Sorghum nervosum" RELATED synonym []
synonym: "Sorghum saccharatum" RELATED synonym []
synonym: "Sorghum vulgare" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4557 ! Sorghum
relationship: RO:0002162 NCBITaxon:4558 ! Sorghum bicolor
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4564
name: Triticum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:72427
synonym: "Crithodium" RELATED synonym []
synonym: "wheats" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:1648030 ! Triticinae
relationship: RO:0002162 NCBITaxon:4564 ! Triticum
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4565
name: Triticum aestivum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:235075
alt_id: NCBITaxon:39424
synonym: "bread wheat" EXACT genbank_common_name []
synonym: "Canadian hard winter wheat" EXACT OMO:0003003 []
synonym: "common wheat" EXACT OMO:0003003 []
synonym: "Triticum aestivum subsp. aestivum" RELATED synonym []
synonym: "Triticum sativum" RELATED synonym []
synonym: "Triticum vulgare" RELATED synonym []
synonym: "wheat" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:4564 ! Triticum
relationship: RO:0002162 NCBITaxon:4565 ! Triticum aestivum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4575
name: Zea
namespace: ncbi_taxonomy
synonym: "Euchlaena" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1648029 ! Tripsacinae
relationship: RO:0002162 NCBITaxon:4575 ! Zea
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4577
name: Zea mays
namespace: ncbi_taxonomy
alt_id: NCBITaxon:4578
synonym: "maize" EXACT OMO:0003003 []
synonym: "Zea mays var. japonica" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4575 ! Zea
relationship: RO:0002162 NCBITaxon:4577 ! Zea mays
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4618
name: Zingiberales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:40513
synonym: "Scitamineae" RELATED synonym []
synonym: "Zingiberiflorae" RELATED in_part []
xref: GC_ID:1
xref: PMID:26350789
is_a: NCBITaxon:4734 ! commelinids
relationship: RO:0002162 NCBITaxon:4618 ! Zingiberales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:4637
name: Musaceae
namespace: ncbi_taxonomy
synonym: "banana family" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:4618 ! Zingiberales
relationship: RO:0002162 NCBITaxon:4637 ! Musaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:4640
name: Musa
namespace: ncbi_taxonomy
alt_id: NCBITaxon:630212
alt_id: NCBITaxon:630213
alt_id: NCBITaxon:630214
alt_id: NCBITaxon:630216
alt_id: NCBITaxon:630218
xref: GC_ID:1
is_a: NCBITaxon:4637 ! Musaceae
relationship: RO:0002162 NCBITaxon:4640 ! Musa
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4641
name: Musa acuminata
namespace: ncbi_taxonomy
alt_id: NCBITaxon:214695
synonym: "banana" EXACT OMO:0003003 []
synonym: "dessert bananas" EXACT OMO:0003003 []
synonym: "dwarf banana" EXACT genbank_common_name []
synonym: "Musa AA Group" RELATED synonym []
synonym: "Musa acuminata AA Group" RELATED synonym []
synonym: "Musa nana" RELATED synonym []
synonym: "sweet banana" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:4640 ! Musa
relationship: RO:0002162 NCBITaxon:4641 ! Musa acuminata
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:46877
name: Drosophilini
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:43845 ! Drosophilinae
relationship: RO:0002162 NCBITaxon:46877 ! Drosophilini
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:4710
name: Arecaceae
namespace: ncbi_taxonomy
synonym: "palm family" EXACT genbank_common_name []
synonym: "Palmae" EXACT equivalent_name []
synonym: "palms" EXACT OMO:0003003 []
xref: GC_ID:1
xref: PMID:26350789
is_a: NCBITaxon:40551 ! Arecales
relationship: RO:0002162 NCBITaxon:4710 ! Arecaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:4719
name: Phoenix
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:169748 ! Phoeniceae
relationship: RO:0002162 NCBITaxon:4719 ! Phoenix
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4734
name: commelinids
namespace: ncbi_taxonomy
synonym: "Commelinidae" RELATED synonym []
synonym: "Commeliniflorae" RELATED synonym []
xref: GC_ID:1
xref: PMID:26350789
is_a: NCBITaxon:1437197 ! Petrosaviidae
relationship: RO:0002162 NCBITaxon:4734 ! commelinids
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:4751
name: Fungi
namespace: ncbi_taxonomy
synonym: "fungi" RELATED blast_name []
synonym: "Mycota" RELATED synonym []
xref: GC_ID:1
xref: PMID:11062127
xref: PMID:12684019
is_a: NCBITaxon:33154 ! Opisthokonta
relationship: RO:0002162 NCBITaxon:4751 ! Fungi
property_value: has_rank NCBITaxon:kingdom
property_value: TAXRANK:1000000 TAXRANK:0000017

[Term]
id: NCBITaxon:47570
name: Schizotrypanum
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5690 ! Trypanosoma
relationship: RO:0002162 NCBITaxon:47570 ! Schizotrypanum
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:4761
name: Chytridiomycota
namespace: ncbi_taxonomy
alt_id: NCBITaxon:4804
synonym: "Caulochytriomycota" RELATED synonym []
synonym: "chytrids & allies" EXACT OMO:0003003 []
synonym: "chytrids & allies" RELATED blast_name []
synonym: "Mastigomycotina" RELATED synonym []
xref: GC_ID:1
xref: PMID:15689432
xref: PMID:17486963
xref: PMID:17572334
is_a: NCBITaxon:3705317 ! chytridiomyceta
relationship: RO:0002162 NCBITaxon:4761 ! Chytridiomycota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:4762
name: Oomycota
namespace: ncbi_taxonomy
synonym: "Oomycetes" RELATED synonym []
synonym: "oomycetes" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:33634 ! Stramenopiles
relationship: RO:0002162 NCBITaxon:4762 ! Oomycota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:47757
name: Adrianichthyidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:28781 ! Adrianichthyoidei
relationship: RO:0002162 NCBITaxon:47757 ! Adrianichthyidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:4776
name: Peronosporales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3418804 ! Peronosporomycetes
relationship: RO:0002162 NCBITaxon:4776 ! Peronosporales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:4777
name: Peronosporaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:162144
synonym: "downy mildews" EXACT OMO:0003003 []
synonym: "downy mildews" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:4776 ! Peronosporales
relationship: RO:0002162 NCBITaxon:4777 ! Peronosporaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:4783
name: Phytophthora
namespace: ncbi_taxonomy
alt_id: NCBITaxon:100869
synonym: "Peronophythora" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4777 ! Peronosporaceae
relationship: RO:0002162 NCBITaxon:4783 ! Phytophthora
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:480117
name: Cyclorrhapha
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:480118 ! Eremoneura
relationship: RO:0002162 NCBITaxon:480117 ! Cyclorrhapha
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:480118
name: Eremoneura
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:43733 ! Muscomorpha
relationship: RO:0002162 NCBITaxon:480118 ! Eremoneura
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:481
name: Neisseriaceae
namespace: ncbi_taxonomy
synonym: "Simonsiellaceae" RELATED synonym []
synonym: "Vitreoscillaceae" RELATED in_part []
xref: GC_ID:11
xref: PMID:13983561
xref: PMID:16350128
xref: PMID:23575986
xref: PMID:37882538
xref: PMID:8347509
is_a: NCBITaxon:206351 ! Neisseriales
relationship: RO:0002162 NCBITaxon:481 ! Neisseriaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:482
name: Neisseria
namespace: ncbi_taxonomy
synonym: "\"Merismopedia\" Zopf 1885" RELATED synonym []
synonym: "Gonococcus" RELATED synonym []
xref: GC_ID:11
xref: PMID:7520730
is_a: NCBITaxon:481 ! Neisseriaceae
relationship: RO:0002162 NCBITaxon:482 ! Neisseria
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:487
name: Neisseria meningitidis
namespace: ncbi_taxonomy
synonym: "Diplokokkus intracellularis meningitidis" RELATED synonym []
synonym: "Micrococcus intracellularis" RELATED synonym []
synonym: "Micrococcus meningitidis" RELATED synonym []
synonym: "Micrococcus meningitidis cerebrospinalis" RELATED synonym []
synonym: "Neisseria weichselbaumii" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:482 ! Neisseria
relationship: RO:0002162 NCBITaxon:487 ! Neisseria meningitidis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4890
name: Ascomycota
namespace: ncbi_taxonomy
synonym: "ascomycete fungi" EXACT genbank_common_name []
synonym: "ascomycete fungi" RELATED blast_name []
synonym: "sac fungi" EXACT OMO:0003003 []
xref: GC_ID:1
xref: PMID:17572334
is_a: NCBITaxon:451864 ! Dikarya
disjoint_from: NCBITaxon:5204 ! Basidiomycota
relationship: RO:0002162 NCBITaxon:4890 ! Ascomycota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:4891
name: Saccharomycetes
namespace: ncbi_taxonomy
synonym: "Hemiascomycetes" RELATED synonym []
xref: GC_ID:1
xref: PMID:38895705
is_a: NCBITaxon:147537 ! Saccharomycotina
relationship: RO:0002162 NCBITaxon:4891 ! Saccharomycetes
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:4892
name: Saccharomycetales
namespace: ncbi_taxonomy
synonym: "Endomycetales" RELATED synonym []
xref: GC_ID:1
xref: PMID:38895705
is_a: NCBITaxon:4891 ! Saccharomycetes
relationship: RO:0002162 NCBITaxon:4892 ! Saccharomycetales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:4893
name: Saccharomycetaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:221665
alt_id: NCBITaxon:44280
xref: GC_ID:1
is_a: NCBITaxon:4892 ! Saccharomycetales
relationship: RO:0002162 NCBITaxon:4893 ! Saccharomycetaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:4894
name: Schizosaccharomycetaceae
namespace: ncbi_taxonomy
synonym: "fission yeasts" EXACT genbank_common_name []
synonym: "Schizosaccharomycetoideae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:34346 ! Schizosaccharomycetales
relationship: RO:0002162 NCBITaxon:4894 ! Schizosaccharomycetaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:4895
name: Schizosaccharomyces
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4894 ! Schizosaccharomycetaceae
relationship: RO:0002162 NCBITaxon:4895 ! Schizosaccharomyces
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4896
name: Schizosaccharomyces pombe
namespace: ncbi_taxonomy
alt_id: NCBITaxon:45042
synonym: "fission yeast" EXACT genbank_common_name []
synonym: "Schizosaccharomyces malidevorans" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4895 ! Schizosaccharomyces
disjoint_from: NCBITaxon:4899 ! Schizosaccharomyces octosporus
relationship: RO:0002162 NCBITaxon:4896 ! Schizosaccharomyces pombe
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4899
name: Schizosaccharomyces octosporus
namespace: ncbi_taxonomy
synonym: "Octosporomyces octosporus" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4895 ! Schizosaccharomyces
relationship: RO:0002162 NCBITaxon:4899 ! Schizosaccharomyces octosporus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:491
name: Neisseria meningitidis serogroup B
namespace: ncbi_taxonomy
synonym: "Neisseria meningitidis (group B)" RELATED synonym []
synonym: "Neisseria meningitidis (serogroup B)" RELATED synonym []
synonym: "Neisseria meningitidis group B" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:487 ! Neisseria meningitidis
relationship: RO:0002162 NCBITaxon:491 ! Neisseria meningitidis serogroup B
property_value: has_rank NCBITaxon:serogroup
property_value: TAXRANK:1000000 TAXRANK:0001006

[Term]
id: NCBITaxon:49274
name: Solanum subgen. Lycopersicon
namespace: ncbi_taxonomy
synonym: "Lycopersicon" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4107 ! Solanum
relationship: RO:0002162 NCBITaxon:49274 ! Solanum subgen. Lycopersicon
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:4930
name: Saccharomyces
namespace: ncbi_taxonomy
alt_id: NCBITaxon:36915
synonym: "Pachytichospora" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4893 ! Saccharomycetaceae
relationship: RO:0002162 NCBITaxon:4930 ! Saccharomyces
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4932
name: Saccharomyces cerevisiae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:252598
alt_id: NCBITaxon:2898199
alt_id: NCBITaxon:41870
synonym: "baker's yeast" EXACT OMO:0003003 []
synonym: "brewer's yeast" EXACT genbank_common_name []
synonym: "Candida robusta" RELATED synonym []
synonym: "Mycoderma cerevisiae" RELATED synonym []
synonym: "Saccharomyces boulardii" EXACT equivalent_name []
synonym: "Saccharomyces boulardii (nom. inval.)" RELATED synonym []
synonym: "Saccharomyces capensis" RELATED synonym []
synonym: "Saccharomyces cerevisiae 'var. diastaticus'" EXACT equivalent_name []
synonym: "Saccharomyces cerevisiae (Desm.) Meyen ex E.C. Hansen, 1883" RELATED synonym []
synonym: "Saccharomyces diastaticus" RELATED synonym []
synonym: "Saccharomyces italicus" RELATED synonym []
synonym: "Saccharomyces oviformis" RELATED synonym []
synonym: "Saccharomyces uvarum var. melibiosus" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4930 ! Saccharomyces
relationship: RO:0002162 NCBITaxon:4932 ! Saccharomyces cerevisiae
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:4951
name: Yarrowia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3316682 ! Dipodascales incertae sedis
relationship: RO:0002162 NCBITaxon:4951 ! Yarrowia
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:4952
name: Yarrowia lipolytica
namespace: ncbi_taxonomy
synonym: "Candida lipolytica" RELATED synonym []
synonym: "Endomycopsis lipolytica" RELATED synonym []
synonym: "Mycotorula lipolytica" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:4951 ! Yarrowia
relationship: RO:0002162 NCBITaxon:4952 ! Yarrowia lipolytica
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:498845
name: Candidatus Korarchaeum
namespace: ncbi_taxonomy
synonym: "Korarchaeum" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:7857801
xref: PMID:8123559
is_a: NCBITaxon:3342182 ! Candidatus Korarchaeaceae
relationship: RO:0002162 NCBITaxon:498845 ! Candidatus Korarchaeum
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:498846
name: Candidatus Korarchaeum cryptofilum
namespace: ncbi_taxonomy
synonym: "Korarchaeum cryptofilum" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:7857801
xref: PMID:8123559
is_a: NCBITaxon:498845 ! Candidatus Korarchaeum
relationship: RO:0002162 NCBITaxon:498846 ! Candidatus Korarchaeum cryptofilum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:5020
name: Phaeosphaeriaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:378064
xref: GC_ID:1
is_a: NCBITaxon:715340 ! Pleosporineae
relationship: RO:0002162 NCBITaxon:5020 ! Phaeosphaeriaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:5042
name: Eurotiales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:36045
synonym: "Elaphomycetales" RELATED synonym []
synonym: "green and blue molds" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:451871 ! Eurotiomycetidae
relationship: RO:0002162 NCBITaxon:5042 ! Eurotiales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:5052
name: Aspergillus <genus>
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1131475
alt_id: NCBITaxon:255780
alt_id: NCBITaxon:36632
alt_id: NCBITaxon:36634
alt_id: NCBITaxon:37503
alt_id: NCBITaxon:41717
alt_id: NCBITaxon:5071
alt_id: NCBITaxon:743109
synonym: "Aspergillus" EXACT scientific_name []
synonym: "Chaetosartorya" RELATED synonym []
synonym: "Dichotomomyces" RELATED synonym []
synonym: "Emericella" RELATED synonym []
synonym: "Petromyces" RELATED synonym []
synonym: "Phialosimplex" RELATED synonym []
synonym: "Polypaecilum" RELATED synonym []
synonym: "Warcupiella" RELATED synonym []
xref: GC_ID:1
xref: PMID:20141373
xref: PMID:28082760
is_a: NCBITaxon:1131492 ! Aspergillaceae
relationship: RO:0002162 NCBITaxon:5052 ! Aspergillus <genus>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:50557
name: Insecta
namespace: ncbi_taxonomy
synonym: "insects" EXACT genbank_common_name []
synonym: "insects" RELATED blast_name []
synonym: "true insects" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:6960 ! Hexapoda
relationship: RO:0002162 NCBITaxon:50557 ! Insecta
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:50827
name: Diplogasteromorpha
namespace: ncbi_taxonomy
synonym: "Diplogasterida" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:2301116 ! Rhabditina
relationship: RO:0002162 NCBITaxon:50827 ! Diplogasteromorpha
property_value: has_rank NCBITaxon:infraorder
property_value: TAXRANK:1000000 TAXRANK:0000013

[Term]
id: NCBITaxon:51240
name: Juglans regia
namespace: ncbi_taxonomy
synonym: "English walnut" EXACT OMO:0003003 []
synonym: "Persian walnut" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:16718 ! Juglans
relationship: RO:0002162 NCBITaxon:51240 ! Juglans regia
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:51291
name: Chlamydiales
namespace: ncbi_taxonomy
synonym: "chlamydias" EXACT genbank_common_name []
synonym: "chlamydias" RELATED blast_name []
xref: GC_ID:11
xref: PMID:10826799
xref: PMID:11211265
xref: PMID:16079343
xref: PMID:25634949
is_a: NCBITaxon:204429 ! Chlamydiia
relationship: RO:0002162 NCBITaxon:51291 ! Chlamydiales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:513050
name: Dictyoglomus turgidum
namespace: ncbi_taxonomy
synonym: "Dictyoglomus turgidum corrig." RELATED synonym []
synonym: "Dictyoglomus turgidus" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:13 ! Dictyoglomus
relationship: RO:0002162 NCBITaxon:513050 ! Dictyoglomus turgidum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:51351
name: Brassica rapa subsp. pekinensis
namespace: ncbi_taxonomy
synonym: "bai cai" EXACT OMO:0003003 []
synonym: "Brassica campestris (Pekinensis Group)" RELATED synonym []
synonym: "Brassica campestris subsp. pekinensis" RELATED synonym []
synonym: "Brassica campestris var. pekinensis" RELATED synonym []
synonym: "Brassica pekinensis" RELATED synonym []
synonym: "Brassica rapa Chinese Cabbage Group" RELATED synonym []
synonym: "Brassica rapa var. glabra" RELATED synonym []
synonym: "Brassica rapa var. pekinensis" RELATED synonym []
synonym: "celery cabbage" EXACT OMO:0003003 []
synonym: "Chinese cabbage" EXACT genbank_common_name []
synonym: "pe-tsai" EXACT OMO:0003003 []
synonym: "Sinapis pekinensis" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:3711 ! Brassica rapa
relationship: RO:0002162 NCBITaxon:51351 ! Brassica rapa subsp. pekinensis
property_value: has_rank NCBITaxon:subspecies
property_value: TAXRANK:1000000 TAXRANK:0000023

[Term]
id: NCBITaxon:5139
name: Sordariales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:222544 ! Sordariomycetidae
relationship: RO:0002162 NCBITaxon:5139 ! Sordariales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:5140
name: Neurospora
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5148 ! Sordariaceae
relationship: RO:0002162 NCBITaxon:5140 ! Neurospora
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5141
name: Neurospora crassa
namespace: ncbi_taxonomy
synonym: "Chrysonilia crassa" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:5140 ! Neurospora
relationship: RO:0002162 NCBITaxon:5141 ! Neurospora crassa
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:5148
name: Sordariaceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5139 ! Sordariales
relationship: RO:0002162 NCBITaxon:5148 ! Sordariaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:515635
name: Dictyoglomus turgidum DSM 6724
namespace: ncbi_taxonomy
synonym: "Dictyoglomus turgidum str. DSM 6724" EXACT equivalent_name []
synonym: "Dictyoglomus turgidum strain DSM 6724" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:28066333
is_a: NCBITaxon:513050 ! Dictyoglomus turgidum
relationship: RO:0002162 NCBITaxon:515635 ! Dictyoglomus turgidum DSM 6724
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:5178
name: Helotiales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:186570
xref: GC_ID:1
xref: PMID:32647610
is_a: NCBITaxon:147548 ! Leotiomycetes
relationship: RO:0002162 NCBITaxon:5178 ! Helotiales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:5179
name: Sclerotinia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:28983 ! Sclerotiniaceae
relationship: RO:0002162 NCBITaxon:5179 ! Sclerotinia
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5180
name: Sclerotinia sclerotiorum
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2100106
synonym: "Peziza sclerotiorum" RELATED synonym []
synonym: "Sclerotinia sclerotiorum (Lib.) de Bary, 1884" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:5179 ! Sclerotinia
relationship: RO:0002162 NCBITaxon:5180 ! Sclerotinia sclerotiorum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:5204
name: Basidiomycota
namespace: ncbi_taxonomy
synonym: "basidiomycete fungi" EXACT genbank_common_name []
synonym: "basidiomycete fungi" RELATED blast_name []
synonym: "basidiomycetes" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:451864 ! Dikarya
relationship: RO:0002162 NCBITaxon:5204 ! Basidiomycota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:5206
name: Cryptococcus <basidiomycete fungi>
namespace: ncbi_taxonomy
alt_id: NCBITaxon:107441
alt_id: NCBITaxon:192653
alt_id: NCBITaxon:5415
synonym: "Cryptococcus" EXACT scientific_name []
synonym: "Filobasidiella" RELATED synonym []
xref: GC_ID:1
xref: PMID:34380577
is_a: NCBITaxon:1884633 ! Cryptococcaceae
relationship: RO:0002162 NCBITaxon:5206 ! Cryptococcus <basidiomycete fungi>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5234
name: Tremellales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:106739
alt_id: NCBITaxon:165809
alt_id: NCBITaxon:34476
synonym: "jelly fungi" EXACT genbank_common_name []
xref: GC_ID:1
xref: PMID:17572334
is_a: NCBITaxon:155616 ! Tremellomycetes
relationship: RO:0002162 NCBITaxon:5234 ! Tremellales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:5258
name: Pucciniales
namespace: ncbi_taxonomy
synonym: "rusts" EXACT genbank_common_name []
synonym: "Uredinales" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:162484 ! Pucciniomycetes
relationship: RO:0002162 NCBITaxon:5258 ! Pucciniales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:5262
name: Pucciniaceae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:203926
synonym: "Pucciniosiraceae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:5258 ! Pucciniales
relationship: RO:0002162 NCBITaxon:5262 ! Pucciniaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:5270
alt_id: NCBITaxon:237631

[Term]
id: NCBITaxon:5296
name: Puccinia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5262 ! Pucciniaceae
relationship: RO:0002162 NCBITaxon:5296 ! Puccinia
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5297
name: Puccinia graminis
namespace: ncbi_taxonomy
synonym: "wheat stem rust" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:5296 ! Puccinia
relationship: RO:0002162 NCBITaxon:5297 ! Puccinia graminis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:5302
name: Agaricomycotina
namespace: ncbi_taxonomy
synonym: "Hymenomycetes" EXACT equivalent_name []
xref: GC_ID:1
is_a: NCBITaxon:5204 ! Basidiomycota
relationship: RO:0002162 NCBITaxon:5302 ! Agaricomycotina
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:54124
name: Neodiplogasteridae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2301094 ! Diplogasteroidea
relationship: RO:0002162 NCBITaxon:54124 ! Neodiplogasteridae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:54125
name: Pristionchus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2301131
synonym: "Mesodiplogaster" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:54124 ! Neodiplogasteridae
relationship: RO:0002162 NCBITaxon:54125 ! Pristionchus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:54126
name: Pristionchus pacificus
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:54125 ! Pristionchus
relationship: RO:0002162 NCBITaxon:54126 ! Pristionchus pacificus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:543
name: Enterobacteriaceae
namespace: ncbi_taxonomy
synonym: "Enterobacteraceae" RELATED synonym []
synonym: "enterobacteria" EXACT genbank_common_name []
synonym: "enterobacteria" RELATED blast_name []
synonym: "gamma-3 proteobacteria" RELATED in_part []
xref: GC_ID:11
xref: PMID:10555323
xref: PMID:10555334
xref: PMID:16166704
xref: PMID:27620848
xref: PMID:34186167
is_a: NCBITaxon:91347 ! Enterobacterales
relationship: RO:0002162 NCBITaxon:543 ! Enterobacteriaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:544448
name: Mycoplasmatota
namespace: ncbi_taxonomy
synonym: "\"Mollicutaeota\" Oren et al. 2015" RELATED synonym []
synonym: "\"Tenericutes\" Murray 1984" RELATED synonym []
synonym: "Mollicutota" RELATED synonym []
synonym: "Tenericutes" EXACT equivalent_name []
xref: GC_ID:11
is_a: NCBITaxon:1783272 ! Bacillati
relationship: RO:0002162 NCBITaxon:544448 ! Mycoplasmatota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:5475
name: Candida
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1535326
synonym: "Torulopsis" RELATED synonym []
xref: GC_ID:12
is_a: NCBITaxon:1535325 ! Candida/Lodderomyces clade
relationship: RO:0002162 NCBITaxon:5475 ! Candida
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5476
name: Candida albicans
namespace: ncbi_taxonomy
alt_id: NCBITaxon:226999
alt_id: NCBITaxon:300021
alt_id: NCBITaxon:39399
synonym: "Candida albicans var. stellatoidea" RELATED synonym []
synonym: "Candida stellatoidea" RELATED synonym []
synonym: "Dematium albicans" RELATED synonym []
synonym: "Endomyces albicans" RELATED synonym []
synonym: "Monilia albicans" RELATED synonym []
synonym: "Monilia stellatoidea" RELATED synonym []
synonym: "Myceloblastanon albicans" RELATED synonym []
synonym: "Mycotorula albicans" RELATED synonym []
synonym: "Oidium albicans" RELATED synonym []
synonym: "Parasaccharomyces albicans" RELATED synonym []
synonym: "Procandida albicans" RELATED synonym []
synonym: "Procandida stellatoidea" RELATED synonym []
synonym: "Saccharomyces albicans" RELATED synonym []
synonym: "Syringospora albicans" RELATED synonym []
xref: GC_ID:12
is_a: NCBITaxon:5475 ! Candida
relationship: RO:0002162 NCBITaxon:5476 ! Candida albicans
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:554915
name: Amoebozoa
namespace: ncbi_taxonomy
synonym: "amoebozoans" EXACT OMO:0003003 []
xref: GC_ID:1
xref: PMID:23020233
xref: PMID:30257078
is_a: NCBITaxon:2759 ! Eukaryota
relationship: RO:0002162 NCBITaxon:554915 ! Amoebozoa
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:555406
name: Archamoebae
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:23020233
is_a: NCBITaxon:2605435 ! Evosea
relationship: RO:0002162 NCBITaxon:555406 ! Archamoebae
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:55824
name: Hirudinea
namespace: ncbi_taxonomy
alt_id: NCBITaxon:6403
synonym: "leeches" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:42113 ! Clitellata
relationship: RO:0002162 NCBITaxon:55824 ! Hirudinea
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:55879
name: Rhabditoidea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2301119 ! Rhabditomorpha
relationship: RO:0002162 NCBITaxon:55879 ! Rhabditoidea
property_value: has_rank NCBITaxon:superfamily
property_value: TAXRANK:1000000 TAXRANK:0000018

[Term]
id: NCBITaxon:55885
name: Peloderinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6243 ! Rhabditidae
relationship: RO:0002162 NCBITaxon:55885 ! Peloderinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:559292
name: Saccharomyces cerevisiae S288C
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4932 ! Saccharomyces cerevisiae
relationship: RO:0002162 NCBITaxon:559292 ! Saccharomyces cerevisiae S288C
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:561
name: Escherichia
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:19700542
is_a: NCBITaxon:543 ! Enterobacteriaceae
disjoint_from: NCBITaxon:590 ! Salmonella
relationship: RO:0002162 NCBITaxon:561 ! Escherichia
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:562
name: Escherichia coli
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1637691
alt_id: NCBITaxon:1806490
alt_id: NCBITaxon:469598
alt_id: NCBITaxon:662101
alt_id: NCBITaxon:662104
synonym: "Bacillus coli" RELATED synonym []
synonym: "Bacterium coli" RELATED synonym []
synonym: "Bacterium coli commune" RELATED synonym []
synonym: "E. coli" EXACT OMO:0003003 []
synonym: "Enterococcus coli" RELATED synonym []
synonym: "Escherichia/Shigella coli" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:10319482
is_a: NCBITaxon:561 ! Escherichia
relationship: RO:0002162 NCBITaxon:562 ! Escherichia coli
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:5653
name: Kinetoplastea
namespace: ncbi_taxonomy
synonym: "Kinetoplastida" RELATED synonym []
synonym: "kinetoplastids" EXACT genbank_common_name []
synonym: "kinetoplastids" RELATED blast_name []
synonym: "kinetoplasts" EXACT OMO:0003003 []
synonym: "Protomonadida" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:33682 ! Euglenozoa
relationship: RO:0002162 NCBITaxon:5653 ! Kinetoplastea
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:5654
name: Trypanosomatidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:2704949 ! Trypanosomatida
relationship: RO:0002162 NCBITaxon:5654 ! Trypanosomatidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:5658
name: Leishmania <genus>
namespace: ncbi_taxonomy
synonym: "Leishmania" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:1286322 ! Leishmaniinae
relationship: RO:0002162 NCBITaxon:5658 ! Leishmania <genus>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:56615
name: Puccinia graminis f. sp. tritici
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5297 ! Puccinia graminis
relationship: RO:0002162 NCBITaxon:56615 ! Puccinia graminis f. sp. tritici
property_value: has_rank http://purl.obolibrary.org/obo/NCBITaxon_forma_specialis
property_value: TAXRANK:1000000 TAXRANK:0001005

[Term]
id: NCBITaxon:5664
name: Leishmania major
namespace: ncbi_taxonomy
synonym: "Leishmania (Leishmania) major" RELATED synonym []
synonym: "Leishmania tropica major" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:38581 ! Leishmania major species complex
relationship: RO:0002162 NCBITaxon:5664 ! Leishmania major
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:5690
name: Trypanosoma
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5654 ! Trypanosomatidae
relationship: RO:0002162 NCBITaxon:5690 ! Trypanosoma
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5691
name: Trypanosoma brucei
namespace: ncbi_taxonomy
synonym: "Trypanosoma (Trypanozoon) brucei" RELATED synonym []
synonym: "Trypanosoma brucei subgroup" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:39700 ! Trypanozoon
relationship: RO:0002162 NCBITaxon:5691 ! Trypanosoma brucei
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:5702
name: Trypanosoma brucei brucei
namespace: ncbi_taxonomy
synonym: "Trypanosoma (Trypanozoon) brucei brucei" RELATED synonym []
synonym: "Trypanosoma brucei subsp. brucei" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:5691 ! Trypanosoma brucei
relationship: RO:0002162 NCBITaxon:5702 ! Trypanosoma brucei brucei
property_value: has_rank NCBITaxon:subspecies
property_value: TAXRANK:1000000 TAXRANK:0000023

[Term]
id: NCBITaxon:5719
name: Parabasalia
namespace: ncbi_taxonomy
alt_id: NCBITaxon:285691
alt_id: NCBITaxon:63759
synonym: "parabasalians" EXACT OMO:0003003 []
synonym: "Parabasalidea" RELATED synonym []
synonym: "parabasalids" EXACT genbank_common_name []
xref: GC_ID:1
xref: PMID:20093080
is_a: NCBITaxon:2611341 ! Metamonada
relationship: RO:0002162 NCBITaxon:5719 ! Parabasalia
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:5721
name: Trichomonas
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:181550 ! Trichomonadidae
relationship: RO:0002162 NCBITaxon:5721 ! Trichomonas
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5722
name: Trichomonas vaginalis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:28848
synonym: "Tritrichomonas vaginalis" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:5721 ! Trichomonas
relationship: RO:0002162 NCBITaxon:5722 ! Trichomonas vaginalis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:5738
name: Diplomonadida
namespace: ncbi_taxonomy
synonym: "diplomonads" EXACT genbank_common_name []
synonym: "diplomonads" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:207245 ! Fornicata
relationship: RO:0002162 NCBITaxon:5738 ! Diplomonadida
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:5739
name: Hexamitidae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:306054
synonym: "Enteromonadidae" RELATED synonym []
xref: GC_ID:6
is_a: NCBITaxon:5738 ! Diplomonadida
relationship: RO:0002162 NCBITaxon:5739 ! Hexamitidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:5740
name: Giardia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:68459 ! Giardiinae
relationship: RO:0002162 NCBITaxon:5740 ! Giardia
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5741
name: Giardia duodenalis
namespace: ncbi_taxonomy
synonym: "Giardia intestinalis" RELATED synonym []
synonym: "Giardia lamblia" RELATED synonym []
synonym: "Lamblia intestinalis" RELATED synonym []
xref: GC_ID:1
xref: PMID:11432808
xref: PMID:19135417
is_a: NCBITaxon:5740 ! Giardia
relationship: RO:0002162 NCBITaxon:5741 ! Giardia duodenalis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:5758
name: Entamoeba
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33084 ! Entamoebidae
relationship: RO:0002162 NCBITaxon:5758 ! Entamoeba
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5759
name: Entamoeba histolytica
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5758 ! Entamoeba
relationship: RO:0002162 NCBITaxon:5759 ! Entamoeba histolytica
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:57678
name: Leptospira interrogans serovar Lai
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:173 ! Leptospira interrogans
relationship: RO:0002162 NCBITaxon:57678 ! Leptospira interrogans serovar Lai

[Term]
id: NCBITaxon:5782
name: Dictyostelium
namespace: ncbi_taxonomy
synonym: "Hyalostilbum" RELATED synonym []
xref: GC_ID:1
xref: PMID:29367151
is_a: NCBITaxon:2058185 ! Dictyosteliaceae
relationship: RO:0002162 NCBITaxon:5782 ! Dictyostelium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5786
name: Dictyostelium purpureum
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:5782 ! Dictyostelium
relationship: RO:0002162 NCBITaxon:5786 ! Dictyostelium purpureum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:5794
name: Apicomplexa
namespace: ncbi_taxonomy
synonym: "apicomplexans" EXACT genbank_common_name []
synonym: "apicomplexans" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:33630 ! Alveolata
disjoint_from: NCBITaxon:5878 ! Ciliophora
relationship: RO:0002162 NCBITaxon:5794 ! Apicomplexa
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:58019
alt_id: NCBITaxon:3312

[Term]
id: NCBITaxon:58023
name: Tracheophyta
namespace: ncbi_taxonomy
synonym: "vascular plants" EXACT OMO:0003003 []
synonym: "vascular plants" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:3193 ! Embryophyta
relationship: RO:0002162 NCBITaxon:58023 ! Tracheophyta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:58024
name: Spermatophyta
namespace: ncbi_taxonomy
synonym: "seed plants" EXACT OMO:0003003 []
synonym: "seed plants" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:78536 ! Euphyllophyta
relationship: RO:0002162 NCBITaxon:58024 ! Spermatophyta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:5819
name: Haemosporida
namespace: ncbi_taxonomy
synonym: "haemosporidians" EXACT genbank_common_name []
synonym: "Haemosporina" RELATED synonym []
synonym: "Haemospororida" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:422676 ! Aconoidasida
relationship: RO:0002162 NCBITaxon:5819 ! Haemosporida
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:5820
name: Plasmodium <genus>
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3448512
synonym: "Plasmodium" EXACT scientific_name []
synonym: "Plasmodium (Plasmodium)" EXACT equivalent_name []
synonym: "Saurocytozoon" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1639119 ! Plasmodiidae
relationship: RO:0002162 NCBITaxon:5820 ! Plasmodium <genus>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5833
name: Plasmodium falciparum
namespace: ncbi_taxonomy
synonym: "malaria parasite P. falciparum" EXACT genbank_common_name []
synonym: "Plasmodium (Laverania) falciparum" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:418107 ! Laverania
relationship: RO:0002162 NCBITaxon:5833 ! Plasmodium falciparum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:5878
name: Ciliophora
namespace: ncbi_taxonomy
synonym: "Ciliata" RELATED synonym []
synonym: "ciliates" EXACT genbank_common_name []
synonym: "ciliates" RELATED blast_name []
xref: GC_ID:6
is_a: NCBITaxon:33630 ! Alveolata
relationship: RO:0002162 NCBITaxon:5878 ! Ciliophora
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:5884
name: Paramecium
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2709423
synonym: "Neobursaridium" RELATED synonym []
xref: GC_ID:6
is_a: NCBITaxon:340080 ! Parameciidae
relationship: RO:0002162 NCBITaxon:5884 ! Paramecium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:5888
name: Paramecium tetraurelia
namespace: ncbi_taxonomy
alt_id: NCBITaxon:42403
synonym: "Paramecium aurelia syngen 4" RELATED synonym []
xref: GC_ID:6
is_a: NCBITaxon:5884 ! Paramecium
relationship: RO:0002162 NCBITaxon:5888 ! Paramecium tetraurelia
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:590
name: Salmonella
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:10319519
xref: PMID:10939679
xref: PMID:12072558
xref: PMID:15653929
xref: PMID:15653930
xref: PMID:3231714
xref: PMID:37486130
xref: PMID:9731304
is_a: NCBITaxon:543 ! Enterobacteriaceae
relationship: RO:0002162 NCBITaxon:590 ! Salmonella
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:59201
name: Salmonella enterica subsp. enterica
namespace: ncbi_taxonomy
alt_id: NCBITaxon:149049
synonym: "Salmonella cholerae-suis subsp. cholerae-suis" RELATED synonym []
synonym: "Salmonella choleraesuis subsp. choleraesuis" RELATED synonym []
synonym: "Salmonella enterica I" RELATED synonym []
synonym: "Salmonella enterica subsp. I" RELATED synonym []
synonym: "Salmonella enterica subsp. Subsp. I" RELATED synonym []
synonym: "Salmonella enterica subsp. Subsp. Ixxx" RELATED synonym []
xref: GC_ID:11
xref: PMID:15653929
xref: PMID:15653930
xref: PMID:7149525
is_a: NCBITaxon:28901 ! Salmonella enterica
relationship: RO:0002162 NCBITaxon:59201 ! Salmonella enterica subsp. enterica
property_value: has_rank NCBITaxon:subspecies
property_value: TAXRANK:1000000 TAXRANK:0000023

[Term]
id: NCBITaxon:6020
name: Oligohymenophorea
namespace: ncbi_taxonomy
synonym: "Holotricha" RELATED synonym []
synonym: "Oligohymenophora" RELATED synonym []
synonym: "Oligohymenophorans" RELATED synonym []
xref: GC_ID:6
is_a: NCBITaxon:431838 ! Intramacronucleata
relationship: RO:0002162 NCBITaxon:6020 ! Oligohymenophorea
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:6072
name: Eumetazoa
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:33208 ! Metazoa
relationship: RO:0002162 NCBITaxon:6072 ! Eumetazoa
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:6073
name: Cnidaria
namespace: ncbi_taxonomy
synonym: "cnidarians" EXACT genbank_common_name []
synonym: "cnidarians" RELATED blast_name []
synonym: "Coelenterata" RELATED in_part []
synonym: "coelenterates" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:6072 ! Eumetazoa
relationship: RO:0002162 NCBITaxon:6073 ! Cnidaria
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:6101
name: Anthozoa
namespace: ncbi_taxonomy
synonym: "anthozoans" EXACT genbank_common_name []
synonym: "anthozoans" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:6073 ! Cnidaria
relationship: RO:0002162 NCBITaxon:6101 ! Anthozoa
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:6102
name: Hexacorallia
namespace: ncbi_taxonomy
alt_id: NCBITaxon:44167
xref: GC_ID:1
is_a: NCBITaxon:6101 ! Anthozoa
relationship: RO:0002162 NCBITaxon:6102 ! Hexacorallia
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:6103
name: Actiniaria
namespace: ncbi_taxonomy
synonym: "actinians" EXACT OMO:0003003 []
synonym: "sea anemones" EXACT genbank_common_name []
synonym: "sea anemones" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:6102 ! Hexacorallia
relationship: RO:0002162 NCBITaxon:6103 ! Actiniaria
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:6157
name: Platyhelminthes
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1312378
alt_id: NCBITaxon:1312379
alt_id: NCBITaxon:166384
synonym: "flatworm" EXACT OMO:0003003 []
synonym: "flatworms" EXACT genbank_common_name []
synonym: "flatworms" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:1206795 ! Lophotrochozoa
disjoint_from: NCBITaxon:6340 ! Annelida
relationship: RO:0002162 NCBITaxon:6157 ! Platyhelminthes
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:6159
name: Tricladida
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147100 ! Rhabditophora
relationship: RO:0002162 NCBITaxon:6159 ! Tricladida
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:6231
name: Nematoda
namespace: ncbi_taxonomy
synonym: "Nemata" RELATED synonym []
synonym: "nematode" EXACT OMO:0003003 []
synonym: "nematodes" EXACT genbank_common_name []
synonym: "nematodes" RELATED blast_name []
synonym: "roundworm" EXACT OMO:0003003 []
synonym: "roundworms" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:1206794 ! Ecdysozoa
disjoint_from: NCBITaxon:88770 ! Panarthropoda
relationship: RO:0002162 NCBITaxon:6231 ! Nematoda
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:6236
name: Rhabditida
namespace: ncbi_taxonomy
alt_id: NCBITaxon:33251
alt_id: NCBITaxon:6308
synonym: "Strongylida" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:119089 ! Chromadorea
relationship: RO:0002162 NCBITaxon:6236 ! Rhabditida
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:6237
name: Caenorhabditis
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:55885 ! Peloderinae
relationship: RO:0002162 NCBITaxon:6237 ! Caenorhabditis
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:6238
name: Caenorhabditis briggsae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:473542
synonym: "Rhabditis briggsae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:6237 ! Caenorhabditis
disjoint_from: NCBITaxon:6239 ! Caenorhabditis elegans
relationship: RO:0002162 NCBITaxon:6238 ! Caenorhabditis briggsae
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:6239
name: Caenorhabditis elegans
namespace: ncbi_taxonomy
synonym: "Rhabditis elegans" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:6237 ! Caenorhabditis
relationship: RO:0002162 NCBITaxon:6239 ! Caenorhabditis elegans
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:6243
name: Rhabditidae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:54603
xref: GC_ID:1
is_a: NCBITaxon:55879 ! Rhabditoidea
relationship: RO:0002162 NCBITaxon:6243 ! Rhabditidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:629
name: Yersinia <enterobacteria>
namespace: ncbi_taxonomy
synonym: "Yersinia" EXACT scientific_name []
xref: GC_ID:11
is_a: NCBITaxon:1903411 ! Yersiniaceae
relationship: RO:0002162 NCBITaxon:629 ! Yersinia <enterobacteria>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:632
name: Yersinia pestis
namespace: ncbi_taxonomy
synonym: "Bacillus pestis" RELATED synonym []
synonym: "Pasteurella pestis" RELATED synonym []
synonym: "Pestisella pestis" RELATED synonym []
synonym: "Yersinia pestis (Lehmann and Neumann 1896) van Loghem 1944 (Approved Lists 1980), nom. cons." RELATED synonym []
synonym: "Yersinia pseudotuberculosis subsp. pestis" RELATED synonym []
xref: GC_ID:11
xref: PMID:15084509
is_a: NCBITaxon:1649845 ! Yersinia pseudotuberculosis complex
relationship: RO:0002162 NCBITaxon:632 ! Yersinia pestis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:63363
name: Aquifex aeolicus
namespace: ncbi_taxonomy
xref: GC_ID:11
is_a: NCBITaxon:2713 ! Aquifex
relationship: RO:0002162 NCBITaxon:63363 ! Aquifex aeolicus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:6340
name: Annelida
namespace: ncbi_taxonomy
synonym: "annelid worms" EXACT OMO:0003003 []
synonym: "segmented worms" EXACT genbank_common_name []
synonym: "segmented worms" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:1206795 ! Lophotrochozoa
relationship: RO:0002162 NCBITaxon:6340 ! Annelida
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:6406
name: Rhynchobdellida
namespace: ncbi_taxonomy
synonym: "freshwater leeches" EXACT OMO:0003003 []
synonym: "jawless leeches" EXACT genbank_common_name []
synonym: "Rhynchobdelliformes" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:55824 ! Hirudinea
relationship: RO:0002162 NCBITaxon:6406 ! Rhynchobdellida
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:6407
name: Glossiphoniidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6406 ! Rhynchobdellida
relationship: RO:0002162 NCBITaxon:6407 ! Glossiphoniidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:64091
name: Halobacterium salinarum NRC-1
namespace: ncbi_taxonomy
synonym: "Halobacterium halobium NRC-1" RELATED synonym []
synonym: "Halobacterium salinarum strain NRC-1" EXACT equivalent_name []
synonym: "Halobacterium sp. (strain NRC-1 / ATCC 700922 / JCM 11081)" RELATED synonym []
synonym: "Halobacterium sp. (strain NRC-1)" RELATED synonym []
synonym: "Halobacterium sp. ATCC 700922" EXACT equivalent_name []
synonym: "Halobacterium sp. JCM 11081" EXACT equivalent_name []
synonym: "Halobacterium sp. NRC-1" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:11016950
xref: PMID:15290323
xref: PMID:18313895
xref: PMID:18485204
xref: PMID:31296677
xref: PMID:31797576
xref: PMID:37379421
is_a: NCBITaxon:2886895 ! Halobacterium salinarum NRC-34001
relationship: RO:0002162 NCBITaxon:64091 ! Halobacterium salinarum NRC-1

[Term]
id: NCBITaxon:641
name: Vibrionaceae
namespace: ncbi_taxonomy
synonym: "gamma-3 proteobacteria" RELATED in_part []
xref: GC_ID:11
xref: PMID:15143042
xref: PMID:4954820
xref: PMID:8427811
is_a: NCBITaxon:135623 ! Vibrionales
relationship: RO:0002162 NCBITaxon:641 ! Vibrionaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:6411
name: Helobdella
namespace: ncbi_taxonomy
alt_id: NCBITaxon:92801
synonym: "Desmobdella" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:6407 ! Glossiphoniidae
relationship: RO:0002162 NCBITaxon:6411 ! Helobdella
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:6412
name: Helobdella robusta
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6411 ! Helobdella
relationship: RO:0002162 NCBITaxon:6412 ! Helobdella robusta
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:64898
name: Aquificaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:12054225
xref: PMID:23812969
xref: PMID:7981093
is_a: NCBITaxon:32069 ! Aquificales
relationship: RO:0002162 NCBITaxon:64898 ! Aquificaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:651137
name: Nitrososphaerota
namespace: ncbi_taxonomy
synonym: "Candidatus Thaumarchaeota" RELATED synonym []
synonym: "Nitrososphaeraeota" RELATED synonym []
synonym: "Thaumarchaeota" RELATED synonym []
xref: GC_ID:11
xref: PMID:21169198
xref: PMID:21632276
xref: PMID:29458499
is_a: NCBITaxon:1783275 ! Thermoproteati
relationship: RO:0002162 NCBITaxon:651137 ! Nitrososphaerota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:653685
name: Bacillus subtilis group
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:17684269
xref: PMID:19622642
xref: PMID:23475340
is_a: NCBITaxon:1386 ! Bacillus <firmicutes>
disjoint_from: NCBITaxon:86661 ! Bacillus cereus group
relationship: RO:0002162 NCBITaxon:653685 ! Bacillus subtilis group
property_value: has_rank species_group
property_value: TAXRANK:1000000 TAXRANK:0000010

[Term]
id: NCBITaxon:662
name: Vibrio
namespace: ncbi_taxonomy
alt_id: NCBITaxon:705
synonym: "Beneckea" RELATED synonym []
synonym: "Listonella" RELATED synonym []
synonym: "Microspira" RELATED synonym []
synonym: "Pacinia" RELATED synonym []
xref: GC_ID:11
xref: PMID:1371064
xref: PMID:17978204
xref: PMID:21057054
xref: PMID:21296930
xref: PMID:24409173
xref: PMID:4935323
xref: PMID:7520733
xref: PMID:8590667
is_a: NCBITaxon:641 ! Vibrionaceae
relationship: RO:0002162 NCBITaxon:662 ! Vibrio
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:665079
name: Sclerotinia sclerotiorum 1980 UF-70
namespace: ncbi_taxonomy
alt_id: NCBITaxon:325569
xref: GC_ID:1
is_a: NCBITaxon:5180 ! Sclerotinia sclerotiorum
relationship: RO:0002162 NCBITaxon:665079 ! Sclerotinia sclerotiorum 1980 UF-70
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:6656
name: Arthropoda
namespace: ncbi_taxonomy
synonym: "arthropods" EXACT genbank_common_name []
synonym: "arthropods" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:88770 ! Panarthropoda
relationship: RO:0002162 NCBITaxon:6656 ! Arthropoda
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:6658
name: Branchiopoda
namespace: ncbi_taxonomy
synonym: "branchiopods" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:3701030 ! Allotriocarida
disjoint_from: NCBITaxon:6960 ! Hexapoda
relationship: RO:0002162 NCBITaxon:6658 ! Branchiopoda
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:666
name: Vibrio cholerae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:140100
alt_id: NCBITaxon:376726
synonym: "Bacillo virgola del Koch" RELATED synonym []
synonym: "Bacillus cholerae" RELATED synonym []
synonym: "Bacillus cholerae-asiaticae" RELATED synonym []
synonym: "Kommabacillus" RELATED synonym []
synonym: "Liquidivibrio cholerae" RELATED synonym []
synonym: "Microspira comma" RELATED synonym []
synonym: "Pacinia cholerae-asiaticae" RELATED synonym []
synonym: "Spirillum cholerae" RELATED synonym []
synonym: "Spirillum cholerae-asiaticae" RELATED synonym []
synonym: "Vibrio albensis" RELATED synonym []
synonym: "Vibrio cholera" RELATED synonym []
synonym: "Vibrio cholerae biovar albensis" RELATED synonym []
synonym: "Vibrio cholerae bv. albensis" RELATED synonym []
synonym: "Vibrio cholerae-asiaticae" RELATED synonym []
synonym: "Vibrio comma" RELATED synonym []
xref: GC_ID:11
xref: PMID:1015934
xref: PMID:9272984
is_a: NCBITaxon:662 ! Vibrio
relationship: RO:0002162 NCBITaxon:666 ! Vibrio cholerae
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:6665
name: Cladocera
namespace: ncbi_taxonomy
synonym: "water flea" EXACT OMO:0003003 []
synonym: "water fleas" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:84337 ! Diplostraca
relationship: RO:0002162 NCBITaxon:6665 ! Cladocera
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:6668
name: Daphnia
namespace: ncbi_taxonomy
alt_id: NCBITaxon:77736
synonym: "common water fleas" EXACT genbank_common_name []
synonym: "Daphniopsis" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:77658 ! Daphniidae
relationship: RO:0002162 NCBITaxon:6668 ! Daphnia
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:6669
name: Daphnia pulex
namespace: ncbi_taxonomy
synonym: "common water flea" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:6668 ! Daphnia
relationship: RO:0002162 NCBITaxon:6669 ! Daphnia pulex
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:68297
name: Dictyoglomota
namespace: ncbi_taxonomy
synonym: "Dictyoglomaeota" RELATED synonym []
synonym: "Dictyoglomi" RELATED synonym []
synonym: "Dictyoglomota corrig. Patel 2021" RELATED synonym []
synonym: "Dictyoglomus group" EXACT OMO:0003003 []
xref: GC_ID:11
xref: PMID:26654112
xref: PMID:29458499
is_a: NCBITaxon:3379134 ! Pseudomonadati
relationship: RO:0002162 NCBITaxon:68297 ! Dictyoglomota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:68336
name: Bacteroidota/Chlorobiota group
namespace: ncbi_taxonomy
synonym: "Bacteroidetes/Chlorobi group" EXACT equivalent_name []
synonym: "CFB/Chlorobi group" RELATED synonym []
synonym: "CFB/Green sulfur bacteria group" RELATED synonym []
synonym: "Cytophagales/Green sulfur bacteria group" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:1783270 ! FCB group
relationship: RO:0002162 NCBITaxon:68336 ! Bacteroidota/Chlorobiota group
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:6843
name: Chelicerata
namespace: ncbi_taxonomy
synonym: "chelicerates" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:6656 ! Arthropoda
relationship: RO:0002162 NCBITaxon:6843 ! Chelicerata
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:684364
name: Batrachochytrium dendrobatidis JAM81
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:109871 ! Batrachochytrium dendrobatidis
relationship: RO:0002162 NCBITaxon:684364 ! Batrachochytrium dendrobatidis JAM81
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:68459
name: Giardiinae
namespace: ncbi_taxonomy
xref: GC_ID:6
is_a: NCBITaxon:5739 ! Hexamitidae
relationship: RO:0002162 NCBITaxon:68459 ! Giardiinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:6854
name: Arachnida
namespace: ncbi_taxonomy
synonym: "arachnids" EXACT genbank_common_name []
synonym: "arachnids" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:6843 ! Chelicerata
relationship: RO:0002162 NCBITaxon:6854 ! Arachnida
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:686
name: Vibrio cholerae O1 biovar El Tor
namespace: ncbi_taxonomy
synonym: "'Vibrio eltor'" RELATED synonym []
synonym: "Vibrio cholerae biovar El Tor" RELATED synonym []
synonym: "Vibrio cholerae biovar eltor" RELATED synonym []
synonym: "Vibrio cholerae O1 biovar eltor" EXACT equivalent_name []
synonym: "Vibrio eltor" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:127906 ! Vibrio cholerae O1
relationship: RO:0002162 NCBITaxon:686 ! Vibrio cholerae O1 biovar El Tor

[Term]
id: NCBITaxon:687453
name: Platacanthomyidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:337687 ! Muroidea
relationship: RO:0002162 NCBITaxon:687453 ! Platacanthomyidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:687454
name: Typhlomys
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:687453 ! Platacanthomyidae
relationship: RO:0002162 NCBITaxon:687454 ! Typhlomys
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:69014
name: Thermococcus kodakarensis KOD1
namespace: ncbi_taxonomy
synonym: "Pyrococcus sp. (strain KOD1)" RELATED synonym []
synonym: "Pyrococcus sp. KOD1" RELATED synonym []
synonym: "Thermococcus kodakaraensis KOD1" RELATED synonym []
synonym: "Thermococcus kodakarensis str. KOD1" EXACT equivalent_name []
synonym: "Thermococcus kodakarensis strain KOD1" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:11029579
xref: PMID:7811092
xref: PMID:9890143
is_a: NCBITaxon:311400 ! Thermococcus kodakarensis
relationship: RO:0002162 NCBITaxon:69014 ! Thermococcus kodakarensis KOD1
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:6933
name: Acari
namespace: ncbi_taxonomy
synonym: "Acarina" RELATED synonym []
synonym: "mites & ticks" EXACT genbank_common_name []
synonym: "mites & ticks" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:6854 ! Arachnida
relationship: RO:0002162 NCBITaxon:6933 ! Acari
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:6934
name: Parasitiformes
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:6933 ! Acari
relationship: RO:0002162 NCBITaxon:6934 ! Parasitiformes
property_value: has_rank NCBITaxon:superorder
property_value: TAXRANK:1000000 TAXRANK:0000020

[Term]
id: NCBITaxon:6935
name: Ixodida
namespace: ncbi_taxonomy
synonym: "ticks" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:6934 ! Parasitiformes
relationship: RO:0002162 NCBITaxon:6935 ! Ixodida
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:6939
name: Ixodidae
namespace: ncbi_taxonomy
synonym: "hard ticks" EXACT OMO:0003003 []
synonym: "hardbacked ticks" EXACT genbank_common_name []
synonym: "scale ticks" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:297308 ! Ixodoidea
relationship: RO:0002162 NCBITaxon:6939 ! Ixodidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:6944
name: Ixodes
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:426442 ! Ixodinae
relationship: RO:0002162 NCBITaxon:6944 ! Ixodes
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:6945
name: Ixodes scapularis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2528633
alt_id: NCBITaxon:29929
synonym: "black-legged tick" EXACT genbank_common_name []
synonym: "blacklegged tick" EXACT OMO:0003003 []
synonym: "deer tick" EXACT OMO:0003003 []
synonym: "Ixodes dammini" RELATED synonym []
synonym: "shoulder tick" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:6944 ! Ixodes
relationship: RO:0002162 NCBITaxon:6945 ! Ixodes scapularis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:6960
name: Hexapoda
namespace: ncbi_taxonomy
synonym: "Atelocerata" RELATED in_part []
synonym: "hexapods" EXACT genbank_common_name []
synonym: "hexapods" RELATED blast_name []
synonym: "Tracheata" RELATED in_part []
synonym: "Uniramia" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:3701030 ! Allotriocarida
relationship: RO:0002162 NCBITaxon:6960 ! Hexapoda
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:7041
name: Coleoptera
namespace: ncbi_taxonomy
synonym: "beetles" EXACT genbank_common_name []
synonym: "beetles" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:3701064 ! Neuropteroidea
relationship: RO:0002162 NCBITaxon:7041 ! Coleoptera
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:70447
name: Ostreococcus
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1525212 ! Bathycoccaceae
relationship: RO:0002162 NCBITaxon:70447 ! Ostreococcus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:70448
name: Ostreococcus tauri
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:70447 ! Ostreococcus
relationship: RO:0002162 NCBITaxon:70448 ! Ostreococcus tauri
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:7065
name: Tenebrionidae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:41090
synonym: "darkling beetles" EXACT OMO:0003003 []
synonym: "darkling ground beetles" EXACT genbank_common_name []
synonym: "Lagriidae" RELATED synonym []
synonym: "long-jointed beetles" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:71527 ! Tenebrionoidea
relationship: RO:0002162 NCBITaxon:7065 ! Tenebrionidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:7069
name: Tribolium <beetles>
namespace: ncbi_taxonomy
synonym: "Tribolium" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:1304792 ! Tenebrionidae incertae sedis
relationship: RO:0002162 NCBITaxon:7069 ! Tribolium <beetles>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:7070
name: Tribolium castaneum
namespace: ncbi_taxonomy
synonym: "Colydium castaneum" RELATED synonym []
synonym: "red flour beetle" EXACT genbank_common_name []
synonym: "rust-red flour beetle" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:7069 ! Tribolium <beetles>
relationship: RO:0002162 NCBITaxon:7070 ! Tribolium castaneum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:70863
name: Shewanella oneidensis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:321336
xref: GC_ID:11
xref: PMID:10319494
xref: PMID:31555221
is_a: NCBITaxon:22 ! Shewanella
relationship: RO:0002162 NCBITaxon:70863 ! Shewanella oneidensis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:71139
name: Eucalyptus grandis
namespace: ncbi_taxonomy
synonym: "rose gum" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:3932 ! Eucalyptus
relationship: RO:0002162 NCBITaxon:71139 ! Eucalyptus grandis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:71193
name: Elateroidea
namespace: ncbi_taxonomy
alt_id: NCBITaxon:71194
xref: GC_ID:1
is_a: NCBITaxon:41087 ! Elateriformia
relationship: RO:0002162 NCBITaxon:71193 ! Elateroidea
property_value: has_rank NCBITaxon:superfamily
property_value: TAXRANK:1000000 TAXRANK:0000018

[Term]
id: NCBITaxon:712
name: Pasteurellaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:10843050
xref: PMID:15280320
xref: PMID:15388716
xref: PMID:17220461
xref: PMID:2223605
xref: PMID:29923825
is_a: NCBITaxon:135625 ! Pasteurellales
relationship: RO:0002162 NCBITaxon:712 ! Pasteurellaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:71239
name: Cucurbitales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:91835 ! fabids
disjoint_from: NCBITaxon:72025 ! Fabales
relationship: RO:0002162 NCBITaxon:71239 ! Cucurbitales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:71240
name: eudicotyledons
namespace: ncbi_taxonomy
alt_id: NCBITaxon:3399
synonym: "dicots" RELATED in_part []
synonym: "Dicotyledoneae" RELATED in_part []
synonym: "dicotyledons" RELATED in_part []
synonym: "eudicots" EXACT OMO:0003003 []
synonym: "eudicots" RELATED blast_name []
xref: GC_ID:1
xref: PMID:25249442
xref: PMID:26724406
is_a: NCBITaxon:1437183 ! Mesangiospermae
relationship: RO:0002162 NCBITaxon:71240 ! eudicotyledons
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:71274
name: asterids
namespace: ncbi_taxonomy
synonym: "Asteridae" EXACT equivalent_name []
xref: GC_ID:1
xref: PMID:12144762
is_a: NCBITaxon:1437201 ! Pentapetalae
disjoint_from: NCBITaxon:71275 ! rosids
relationship: RO:0002162 NCBITaxon:71274 ! asterids
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:71275
name: rosids
namespace: ncbi_taxonomy
synonym: "Rosidae" RELATED in_part []
xref: GC_ID:1
is_a: NCBITaxon:1437201 ! Pentapetalae
relationship: RO:0002162 NCBITaxon:71275 ! rosids
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:71421
name: Haemophilus influenzae Rd KW20
namespace: ncbi_taxonomy
synonym: "Haemophilus influenzae KW20" EXACT equivalent_name []
synonym: "Haemophilus influenzae Rd" EXACT equivalent_name []
xref: GC_ID:11
is_a: NCBITaxon:727 ! Haemophilus influenzae
relationship: RO:0002162 NCBITaxon:71421 ! Haemophilus influenzae Rd KW20
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:7147
name: Diptera
namespace: ncbi_taxonomy
synonym: "flies" EXACT genbank_common_name []
synonym: "flies" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:3701063 ! Panorpida
relationship: RO:0002162 NCBITaxon:7147 ! Diptera
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:7148
name: Nematocera
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7147 ! Diptera
disjoint_from: NCBITaxon:7203 ! Brachycera
relationship: RO:0002162 NCBITaxon:7148 ! Nematocera
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:71527
name: Tenebrionoidea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:41088 ! Cucujiformia
relationship: RO:0002162 NCBITaxon:71527 ! Tenebrionoidea
property_value: has_rank NCBITaxon:superfamily
property_value: TAXRANK:1000000 TAXRANK:0000018

[Term]
id: NCBITaxon:715340
name: Pleosporineae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:92860 ! Pleosporales
relationship: RO:0002162 NCBITaxon:715340 ! Pleosporineae
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:7157
name: Culicidae
namespace: ncbi_taxonomy
synonym: "mosquitos" EXACT genbank_common_name []
synonym: "mosquitos" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:41827 ! Culicoidea
relationship: RO:0002162 NCBITaxon:7157 ! Culicidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:715962
name: dothideomyceta
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:716546 ! leotiomyceta
disjoint_from: NCBITaxon:715989 ! sordariomyceta
relationship: RO:0002162 NCBITaxon:715962 ! dothideomyceta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:715989
name: sordariomyceta
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:716546 ! leotiomyceta
relationship: RO:0002162 NCBITaxon:715989 ! sordariomyceta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:7164
name: Anopheles <genus>
namespace: ncbi_taxonomy
synonym: "Anopheles" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:43816 ! Anophelinae
relationship: RO:0002162 NCBITaxon:7164 ! Anopheles <genus>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:7165
name: Anopheles gambiae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:377270
synonym: "African malaria mosquito" EXACT genbank_common_name []
xref: GC_ID:1
xref: PMID:16076241
is_a: NCBITaxon:44542 ! gambiae species complex
relationship: RO:0002162 NCBITaxon:7165 ! Anopheles gambiae
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:716545
name: saccharomyceta
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:4890 ! Ascomycota
relationship: RO:0002162 NCBITaxon:716545 ! saccharomyceta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:716546
name: leotiomyceta
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:147538 ! Pezizomycotina
relationship: RO:0002162 NCBITaxon:716546 ! leotiomyceta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:72025
name: Fabales
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:91835 ! fabids
relationship: RO:0002162 NCBITaxon:72025 ! Fabales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:7203
name: Brachycera
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7147 ! Diptera
relationship: RO:0002162 NCBITaxon:7203 ! Brachycera
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:7214
name: Drosophilidae
namespace: ncbi_taxonomy
synonym: "pomace flies" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:43746 ! Ephydroidea
relationship: RO:0002162 NCBITaxon:7214 ! Drosophilidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:7215
name: Drosophila <flies,genus>
namespace: ncbi_taxonomy
alt_id: NCBITaxon:7326
synonym: "Drosophila" EXACT scientific_name []
synonym: "fruit flies" EXACT genbank_common_name []
synonym: "fruit fly" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:46877 ! Drosophilini
relationship: RO:0002162 NCBITaxon:7215 ! Drosophila <flies,genus>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:721805
name: Amygdaleae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:171637 ! Amygdaloideae
relationship: RO:0002162 NCBITaxon:721805 ! Amygdaleae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:7227
name: Drosophila melanogaster
namespace: ncbi_taxonomy
alt_id: NCBITaxon:2267365
synonym: "fruit fly" EXACT genbank_common_name []
synonym: "Sophophora melanogaster" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:32351 ! melanogaster subgroup
relationship: RO:0002162 NCBITaxon:7227 ! Drosophila melanogaster
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:72274
name: Pseudomonadales
namespace: ncbi_taxonomy
synonym: "gamma-3 proteobacteria" RELATED in_part []
synonym: "Pseudomonaceae/Moraxellaceae group" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:1236 ! Gammaproteobacteria
disjoint_from: NCBITaxon:91347 ! Enterobacterales
relationship: RO:0002162 NCBITaxon:72274 ! Pseudomonadales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:72293
name: Helicobacteraceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:16403855
xref: PMID:29034857
is_a: NCBITaxon:213849 ! Campylobacterales
relationship: RO:0002162 NCBITaxon:72293 ! Helicobacteraceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:724
name: Haemophilus
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:1736960
is_a: NCBITaxon:712 ! Pasteurellaceae
relationship: RO:0002162 NCBITaxon:724 ! Haemophilus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:727
name: Haemophilus influenzae
namespace: ncbi_taxonomy
synonym: "Bacterium influenzae" RELATED synonym []
synonym: "Coccobacillus pfeifferi" RELATED synonym []
synonym: "Haemophilus meningitidis" RELATED synonym []
synonym: "Influenza-bacillus" RELATED synonym []
synonym: "Mycobacterium influenzae" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:724 ! Haemophilus
relationship: RO:0002162 NCBITaxon:727 ! Haemophilus influenzae
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:745062
name: Lactucinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:219121 ! Cichorieae
relationship: RO:0002162 NCBITaxon:745062 ! Lactucinae
property_value: has_rank NCBITaxon:subtribe
property_value: TAXRANK:1000000 TAXRANK:0000028

[Term]
id: NCBITaxon:746128
name: Aspergillus fumigatus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1476192
alt_id: NCBITaxon:41121
alt_id: NCBITaxon:5085
alt_id: NCBITaxon:91482
alt_id: NCBITaxon:945814
synonym: "Aspergillus fumigatus Fresen., 1863" RELATED synonym []
synonym: "Aspergillus fumigatus var. ellipticus" RELATED synonym []
synonym: "Aspergillus neoellipticus" RELATED synonym []
synonym: "Neosartorya fumigata" RELATED synonym []
synonym: "Sartorya fumigata" RELATED synonym []
xref: GC_ID:1
xref: PMID:34854710
xref: PMID:34854717
is_a: NCBITaxon:2720872 ! Fumigati
relationship: RO:0002162 NCBITaxon:746128 ! Aspergillus fumigatus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:7496
name: Pterygota <insects>
namespace: ncbi_taxonomy
synonym: "Pterygota" EXACT scientific_name []
synonym: "winged insects" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:85512 ! Dicondylia
relationship: RO:0002162 NCBITaxon:7496 ! Pterygota <insects>
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:7586
name: Echinodermata
namespace: ncbi_taxonomy
synonym: "echinoderms" EXACT genbank_common_name []
synonym: "echinoderms" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:33511 ! Deuterostomia
disjoint_from: NCBITaxon:7711 ! Chordata
relationship: RO:0002162 NCBITaxon:7586 ! Echinodermata
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:76071
name: Beloniformes
namespace: ncbi_taxonomy
synonym: "medakas, needlefish and others" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:1489913 ! Atherinomorphae
relationship: RO:0002162 NCBITaxon:76071 ! Beloniformes
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:7624
name: Echinozoa
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:133551 ! Eleutherozoa
relationship: RO:0002162 NCBITaxon:7624 ! Echinozoa
property_value: has_rank NCBITaxon:superclass
property_value: TAXRANK:1000000 TAXRANK:0000015

[Term]
id: NCBITaxon:7625
name: Echinoidea
namespace: ncbi_taxonomy
synonym: "sea urchin" EXACT OMO:0003003 []
synonym: "sea urchins" EXACT genbank_common_name []
synonym: "sea urchins" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:7624 ! Echinozoa
relationship: RO:0002162 NCBITaxon:7625 ! Echinoidea
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:7638
name: Euechinoidea
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7625 ! Echinoidea
relationship: RO:0002162 NCBITaxon:7638 ! Euechinoidea
property_value: has_rank NCBITaxon:subclass
property_value: TAXRANK:1000000 TAXRANK:0000007

[Term]
id: NCBITaxon:7664
name: Strongylocentrotus
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:31181 ! Strongylocentrotidae
relationship: RO:0002162 NCBITaxon:7664 ! Strongylocentrotus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:766764
name: Debaryomycetaceae
namespace: ncbi_taxonomy
xref: GC_ID:12
is_a: NCBITaxon:2916678 ! Serinales
relationship: RO:0002162 NCBITaxon:766764 ! Debaryomycetaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:7668
name: Strongylocentrotus purpuratus
namespace: ncbi_taxonomy
synonym: "Echinus purpuratus" RELATED synonym []
synonym: "purple sea urchin" EXACT genbank_common_name []
synonym: "purple urchin" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:7664 ! Strongylocentrotus
relationship: RO:0002162 NCBITaxon:7668 ! Strongylocentrotus purpuratus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:7674
name: Echinacea <sea urchins>
namespace: ncbi_taxonomy
synonym: "Echinacea" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:7638 ! Euechinoidea
relationship: RO:0002162 NCBITaxon:7674 ! Echinacea <sea urchins>
property_value: has_rank NCBITaxon:superorder
property_value: TAXRANK:1000000 TAXRANK:0000020

[Term]
id: NCBITaxon:7675
name: Echinidea
namespace: ncbi_taxonomy
synonym: "Echinoida" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:2785018 ! Camarodonta
relationship: RO:0002162 NCBITaxon:7675 ! Echinidea
property_value: has_rank NCBITaxon:infraorder
property_value: TAXRANK:1000000 TAXRANK:0000013

[Term]
id: NCBITaxon:76856
name: Fusobacterium nucleatum subsp. nucleatum
namespace: ncbi_taxonomy
synonym: "Fusibacterium nucleatum subsp. nucleatum" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:2223601
is_a: NCBITaxon:851 ! Fusobacterium nucleatum
relationship: RO:0002162 NCBITaxon:76856 ! Fusobacterium nucleatum subsp. nucleatum
property_value: has_rank NCBITaxon:subspecies
property_value: TAXRANK:1000000 TAXRANK:0000023

[Term]
id: NCBITaxon:7711
name: Chordata
namespace: ncbi_taxonomy
synonym: "chordates" EXACT genbank_common_name []
synonym: "chordates" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:33511 ! Deuterostomia
relationship: RO:0002162 NCBITaxon:7711 ! Chordata
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:7712
name: Tunicata
namespace: ncbi_taxonomy
synonym: "tunicates" EXACT genbank_common_name []
synonym: "tunicates" RELATED blast_name []
synonym: "Urochordata" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:7711 ! Chordata
disjoint_from: NCBITaxon:7735 ! Cephalochordata
disjoint_from: NCBITaxon:89593 ! Craniata <chordates>
relationship: RO:0002162 NCBITaxon:7712 ! Tunicata
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:7713
name: Ascidiacea
namespace: ncbi_taxonomy
alt_id: NCBITaxon:183770
synonym: "Enterogona" RELATED in_part []
synonym: "sea squirts" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:7712 ! Tunicata
relationship: RO:0002162 NCBITaxon:7713 ! Ascidiacea
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:7716
name: Phlebobranchia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7713 ! Ascidiacea
relationship: RO:0002162 NCBITaxon:7716 ! Phlebobranchia
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:7717
name: Cionidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7716 ! Phlebobranchia
relationship: RO:0002162 NCBITaxon:7717 ! Cionidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:7718
name: Ciona
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7717 ! Cionidae
relationship: RO:0002162 NCBITaxon:7718 ! Ciona
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:7719
name: Ciona intestinalis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:413600
synonym: "Ascidia intestinalis" RELATED synonym []
synonym: "sea vase" EXACT OMO:0003003 []
synonym: "vase tunicate" EXACT genbank_common_name []
synonym: "yellow sea squirt" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:7718 ! Ciona
relationship: RO:0002162 NCBITaxon:7719 ! Ciona intestinalis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:7735
name: Cephalochordata
namespace: ncbi_taxonomy
synonym: "lancelets" EXACT genbank_common_name []
synonym: "lancelets" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:7711 ! Chordata
disjoint_from: NCBITaxon:89593 ! Craniata <chordates>
relationship: RO:0002162 NCBITaxon:7735 ! Cephalochordata
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:7736
name: Branchiostomatidae
namespace: ncbi_taxonomy
synonym: "amphioxi" EXACT OMO:0003003 []
synonym: "amphioxius" EXACT OMO:0003003 []
synonym: "Branchiostomidae" RELATED synonym []
synonym: "lancelets" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:2682553 ! Amphioxiformes
relationship: RO:0002162 NCBITaxon:7736 ! Branchiostomatidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:7737
name: Branchiostoma
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7736 ! Branchiostomatidae
relationship: RO:0002162 NCBITaxon:7737 ! Branchiostoma
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:7739
name: Branchiostoma floridae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:94971
synonym: "Amphioxus floridae" RELATED synonym []
synonym: "Florida lancelet" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:7737 ! Branchiostoma
relationship: RO:0002162 NCBITaxon:7739 ! Branchiostoma floridae
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:7742
name: Vertebrata <vertebrates>
namespace: ncbi_taxonomy
synonym: "Vertebrata" EXACT scientific_name []
synonym: "vertebrates" EXACT genbank_common_name []
synonym: "vertebrates" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:89593 ! Craniata <chordates>
relationship: RO:0002162 NCBITaxon:7742 ! Vertebrata <vertebrates>
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:7745
name: Petromyzontiformes
namespace: ncbi_taxonomy
synonym: "lampreys" EXACT genbank_common_name []
synonym: "lampreys" RELATED blast_name []
synonym: "Petromyzoniformes" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:117569 ! Hyperoartia
relationship: RO:0002162 NCBITaxon:7745 ! Petromyzontiformes
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:7746
name: Petromyzontidae
namespace: ncbi_taxonomy
synonym: "lampreys" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:7745 ! Petromyzontiformes
relationship: RO:0002162 NCBITaxon:7746 ! Petromyzontidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:776
name: Coxiella <g-proteobacteria>
namespace: ncbi_taxonomy
synonym: "Burnetia" RELATED synonym []
synonym: "Coxiella" EXACT scientific_name []
xref: GC_ID:11
is_a: NCBITaxon:118968 ! Coxiellaceae
relationship: RO:0002162 NCBITaxon:776 ! Coxiella <g-proteobacteria>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:7761
name: Myxiniformes
namespace: ncbi_taxonomy
synonym: "hagfishes" EXACT genbank_common_name []
synonym: "hagfishes" RELATED blast_name []
synonym: "Myxinoidea" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:117565 ! Myxini
relationship: RO:0002162 NCBITaxon:7761 ! Myxiniformes
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:7762
name: Myxinidae
namespace: ncbi_taxonomy
synonym: "hagfishes" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:7761 ! Myxiniformes
relationship: RO:0002162 NCBITaxon:7762 ! Myxinidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:77643
name: Mycobacterium tuberculosis complex
namespace: ncbi_taxonomy
synonym: "Mycobacterium complex" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:15243089
xref: PMID:29205127
is_a: NCBITaxon:1763 ! Mycobacterium
relationship: RO:0002162 NCBITaxon:77643 ! Mycobacterium tuberculosis complex
property_value: has_rank species_group
property_value: TAXRANK:1000000 TAXRANK:0000010

[Term]
id: NCBITaxon:77658
name: Daphniidae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:77729
xref: GC_ID:1
is_a: NCBITaxon:116561 ! Anomopoda
relationship: RO:0002162 NCBITaxon:77658 ! Daphniidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:777
name: Coxiella burnetii
namespace: ncbi_taxonomy
synonym: "Coxiella burneti" RELATED synonym []
synonym: "Coxiella burnetii corrig." RELATED synonym []
synonym: "Rickettsia burneti" RELATED synonym []
synonym: "Rickettsia diaporica" RELATED synonym []
xref: GC_ID:11
xref: PMID:9226923
is_a: NCBITaxon:776 ! Coxiella <g-proteobacteria>
relationship: RO:0002162 NCBITaxon:777 ! Coxiella burnetii
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:7776
name: Gnathostomata <vertebrates>
namespace: ncbi_taxonomy
synonym: "Gnathostomata" EXACT scientific_name []
synonym: "jawed vertebrates" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:7742 ! Vertebrata <vertebrates>
relationship: RO:0002162 NCBITaxon:7776 ! Gnathostomata <vertebrates>
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:78536
name: Euphyllophyta
namespace: ncbi_taxonomy
synonym: "euphyllophytes" EXACT equivalent_name []
xref: GC_ID:1
is_a: NCBITaxon:58023 ! Tracheophyta
relationship: RO:0002162 NCBITaxon:78536 ! Euphyllophyta
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:7898
name: Actinopterygii
namespace: ncbi_taxonomy
synonym: "Actinopterygi" RELATED synonym []
synonym: "fish" EXACT OMO:0003003 []
synonym: "fishes" EXACT OMO:0003003 []
synonym: "Osteichthyes" RELATED in_part []
synonym: "ray-finned fishes" EXACT genbank_common_name []
synonym: "ray-finned fishes" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:117571 ! Euteleostomi
disjoint_from: NCBITaxon:8287 ! Sarcopterygii
relationship: RO:0002162 NCBITaxon:7898 ! Actinopterygii
property_value: has_rank NCBITaxon:superclass
property_value: TAXRANK:1000000 TAXRANK:0000015

[Term]
id: NCBITaxon:7914
name: Semionotiformes
namespace: ncbi_taxonomy
synonym: "Lepisosteiformes" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:1489100 ! Holostei
relationship: RO:0002162 NCBITaxon:7914 ! Semionotiformes
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:7915
name: Lepisosteidae
namespace: ncbi_taxonomy
synonym: "gars" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:7914 ! Semionotiformes
relationship: RO:0002162 NCBITaxon:7915 ! Lepisosteidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:7916
name: Lepisosteus
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:7915 ! Lepisosteidae
relationship: RO:0002162 NCBITaxon:7916 ! Lepisosteus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:7918
name: Lepisosteus oculatus
namespace: ncbi_taxonomy
synonym: "spotted gar" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:7916 ! Lepisosteus
relationship: RO:0002162 NCBITaxon:7918 ! Lepisosteus oculatus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:7952
name: Cypriniformes
namespace: ncbi_taxonomy
synonym: "carps and others" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:186627 ! Cypriniphysae
relationship: RO:0002162 NCBITaxon:7952 ! Cypriniformes
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:7954
name: Danio
namespace: ncbi_taxonomy
alt_id: NCBITaxon:46777
alt_id: NCBITaxon:487617
synonym: "Brachydanio" RELATED synonym []
synonym: "Celestichthys" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:2743711 ! Danioninae
relationship: RO:0002162 NCBITaxon:7954 ! Danio
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:7955
name: Danio rerio
namespace: ncbi_taxonomy
alt_id: NCBITaxon:27702
alt_id: NCBITaxon:37966
synonym: "Brachydanio rerio" RELATED synonym []
synonym: "Brachydanio rerio frankei" RELATED synonym []
synonym: "Cyprinus rerio" RELATED synonym []
synonym: "Danio frankei" RELATED synonym []
synonym: "Danio rerio frankei" RELATED synonym []
synonym: "leopard danio" EXACT OMO:0003003 []
synonym: "zebra danio" EXACT OMO:0003003 []
synonym: "zebra fish" EXACT OMO:0003003 []
synonym: "zebrafish" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:7954 ! Danio
relationship: RO:0002162 NCBITaxon:7955 ! Danio rerio
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:8088
name: Oryziinae
namespace: ncbi_taxonomy
synonym: "medakas" EXACT genbank_common_name []
synonym: "Oryziatinae" RELATED synonym []
synonym: "ricefishes" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:47757 ! Adrianichthyidae
relationship: RO:0002162 NCBITaxon:8088 ! Oryziinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:8089
name: Oryzias
namespace: ncbi_taxonomy
alt_id: NCBITaxon:123687
synonym: "Xenopoecilus" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:8088 ! Oryziinae
relationship: RO:0002162 NCBITaxon:8089 ! Oryzias
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:809
name: Chlamydiaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:10319462
xref: PMID:10319506
xref: PMID:11211261
xref: PMID:11211265
xref: PMID:25618261
is_a: NCBITaxon:51291 ! Chlamydiales
relationship: RO:0002162 NCBITaxon:809 ! Chlamydiaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:8090
name: Oryzias latipes
namespace: ncbi_taxonomy
synonym: "Japanese medaka" EXACT genbank_common_name []
synonym: "Japanese rice fish" EXACT OMO:0003003 []
synonym: "medaka" EXACT OMO:0003003 []
synonym: "Poecilia latipes" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:8089 ! Oryzias
relationship: RO:0002162 NCBITaxon:8090 ! Oryzias latipes
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:810
name: Chlamydia
namespace: ncbi_taxonomy
alt_id: NCBITaxon:83553
synonym: "\"Prowazekia\" Coles 1953" RELATED synonym []
synonym: "Bedsonia" RELATED synonym []
synonym: "Chlamydophila" RELATED synonym []
synonym: "Miyagawanella" RELATED synonym []
synonym: "Rakeia" RELATED synonym []
synonym: "Rickettsiaformis" RELATED synonym []
xref: GC_ID:11
xref: PMID:10319462
xref: PMID:11211265
xref: PMID:21048221
xref: PMID:21048222
xref: PMID:23620152
xref: PMID:25618261
xref: PMID:9103632
xref: PMID:9103637
is_a: NCBITaxon:1113537 ! Chlamydia/Chlamydophila group
relationship: RO:0002162 NCBITaxon:810 ! Chlamydia
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:813
name: Chlamydia trachomatis
namespace: ncbi_taxonomy
synonym: "Chlamydozoon trachomatis" RELATED synonym []
synonym: "Rickettsia trachomae" RELATED synonym []
synonym: "Rickettsia trachomatis" RELATED synonym []
xref: GC_ID:11
xref: PMID:10192388
xref: PMID:10319462
xref: PMID:8102247
xref: PMID:8347519
is_a: NCBITaxon:810 ! Chlamydia
relationship: RO:0002162 NCBITaxon:813 ! Chlamydia trachomatis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:815
name: Bacteroidaceae
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:8300528
is_a: NCBITaxon:171549 ! Bacteroidales
relationship: RO:0002162 NCBITaxon:815 ! Bacteroidaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:81525
name: Monosiga
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:81529 ! Salpingoecidae
relationship: RO:0002162 NCBITaxon:81525 ! Monosiga
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:81529
name: Salpingoecidae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:81524
synonym: "Codonosigidae" RELATED synonym []
synonym: "Monosigidae" RELATED synonym []
xref: GC_ID:1
xref: PMID:27765632
is_a: NCBITaxon:1924738 ! Craspedida
relationship: RO:0002162 NCBITaxon:81529 ! Salpingoecidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:816
name: Bacteroides
namespace: ncbi_taxonomy
synonym: "Capsularis" RELATED synonym []
synonym: "Ristella" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:815 ! Bacteroidaceae
relationship: RO:0002162 NCBITaxon:816 ! Bacteroides
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:818
name: Bacteroides thetaiotaomicron
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1145805
alt_id: NCBITaxon:1145866
alt_id: NCBITaxon:1146176
alt_id: NCBITaxon:1146582
alt_id: NCBITaxon:1189829
alt_id: NCBITaxon:1201516
alt_id: NCBITaxon:1201798
alt_id: NCBITaxon:1201827
alt_id: NCBITaxon:469586
synonym: "Bacillus thetaiotaomicron" RELATED synonym []
synonym: "Bacteroides fragilis subsp. thetaiotaomicron" RELATED synonym []
synonym: "Pseudobacterium thetaiotaomicron" RELATED synonym []
synonym: "Sphaerocillus thetaiotaomicron" RELATED synonym []
xref: GC_ID:11
xref: PMID:28066339
is_a: NCBITaxon:816 ! Bacteroides
relationship: RO:0002162 NCBITaxon:818 ! Bacteroides thetaiotaomicron
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:81824
name: Monosiga brevicollis
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:81525 ! Monosiga
relationship: RO:0002162 NCBITaxon:81824 ! Monosiga brevicollis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:8287
name: Sarcopterygii
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:117571 ! Euteleostomi
relationship: RO:0002162 NCBITaxon:8287 ! Sarcopterygii
property_value: has_rank NCBITaxon:superclass
property_value: TAXRANK:1000000 TAXRANK:0000015

[Term]
id: NCBITaxon:8292
name: Amphibia
namespace: ncbi_taxonomy
synonym: "amphibians" EXACT genbank_common_name []
synonym: "amphibians" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:32523 ! Tetrapoda
relationship: RO:0002162 NCBITaxon:8292 ! Amphibia
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:83332
name: Mycobacterium tuberculosis H37Rv
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1316272
synonym: "Mycobacterium sp. H37Rv" RELATED synonym []
synonym: "Mycobacterium tuberculosis str. H37Rv" EXACT equivalent_name []
synonym: "Mycobacterium tuberculosis strain H37Rv" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:12218036
xref: PMID:12368430
xref: PMID:9634230
is_a: NCBITaxon:1773 ! Mycobacterium tuberculosis
relationship: RO:0002162 NCBITaxon:83332 ! Mycobacterium tuberculosis H37Rv
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:83333
name: Escherichia coli K-12
namespace: ncbi_taxonomy
synonym: "Escherichia coli K12" EXACT equivalent_name []
xref: GC_ID:11
is_a: NCBITaxon:562 ! Escherichia coli
relationship: RO:0002162 NCBITaxon:83333 ! Escherichia coli K-12
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:8342
name: Anura
namespace: ncbi_taxonomy
synonym: "anurans" EXACT OMO:0003003 []
synonym: "frogs" EXACT OMO:0003003 []
synonym: "frogs & toads" EXACT genbank_common_name []
synonym: "frogs & toads" RELATED blast_name []
synonym: "Salientia" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:41666 ! Batrachia
relationship: RO:0002162 NCBITaxon:8342 ! Anura
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:8352
name: Pipidae
namespace: ncbi_taxonomy
synonym: "pipid frogs" EXACT OMO:0003003 []
synonym: "tongueless frogs" EXACT genbank_common_name []
xref: GC_ID:1
xref: PMID:2385174
is_a: NCBITaxon:30319 ! Pipoidea
relationship: RO:0002162 NCBITaxon:8352 ! Pipidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:8353
name: Xenopus <genus>
namespace: ncbi_taxonomy
synonym: "Xenopus" EXACT scientific_name []
xref: GC_ID:1
xref: PMID:2385174
is_a: NCBITaxon:8360 ! Xenopodinae
relationship: RO:0002162 NCBITaxon:8353 ! Xenopus <genus>
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:8360
name: Xenopodinae
namespace: ncbi_taxonomy
synonym: "Siluraninae" RELATED synonym []
xref: GC_ID:1
xref: PMID:2385174
is_a: NCBITaxon:8352 ! Pipidae
relationship: RO:0002162 NCBITaxon:8360 ! Xenopodinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:8363
name: Silurana
namespace: ncbi_taxonomy
synonym: "Xenopus tropicalis group" RELATED synonym []
xref: GC_ID:1
xref: PMID:2385174
is_a: NCBITaxon:8353 ! Xenopus <genus>
relationship: RO:0002162 NCBITaxon:8363 ! Silurana
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:8364
name: Xenopus tropicalis
namespace: ncbi_taxonomy
synonym: "Silurana tropicalis" RELATED synonym []
synonym: "tropical clawed frog" EXACT genbank_common_name []
synonym: "western clawed frog" EXACT OMO:0003003 []
synonym: "Xenopus (Silurana) tropicalis" RELATED synonym []
synonym: "Xenopus laevis tropicalis" RELATED synonym []
xref: GC_ID:1
xref: PMID:2385174
is_a: NCBITaxon:8363 ! Silurana
relationship: RO:0002162 NCBITaxon:8364 ! Xenopus tropicalis
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:84337
name: Diplostraca
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:116557 ! Phyllopoda
relationship: RO:0002162 NCBITaxon:84337 ! Diplostraca
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:8457
name: Sauropsida
namespace: ncbi_taxonomy
synonym: "sauropsids" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:32524 ! Amniota
relationship: RO:0002162 NCBITaxon:8457 ! Sauropsida
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:848
name: Fusobacterium
namespace: ncbi_taxonomy
synonym: "Fusibacterium" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:11931161
xref: PMID:1715737
is_a: NCBITaxon:203492 ! Fusobacteriaceae
relationship: RO:0002162 NCBITaxon:848 ! Fusobacterium
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:8492
name: Archosauria
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1329799 ! Archelosauria
relationship: RO:0002162 NCBITaxon:8492 ! Archosauria
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:85007
name: Mycobacteriales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1761
synonym: "Corynebacteriales" RELATED synonym []
synonym: "Corynebacteriales Goodfellow and Jones 2015" RELATED synonym []
synonym: "Corynebacteriineae" RELATED synonym []
synonym: "Corynebacteriineae corrig. Stackebrandt et al. 1997" RELATED synonym []
synonym: "Corynebacterineae" RELATED synonym []
synonym: "Mycobacteriales Janke 1924 (Approved Lists 1980)" RELATED synonym []
synonym: "Mycobacteriineae" RELATED synonym []
xref: GC_ID:11
xref: PMID:11837321
xref: PMID:1736962
xref: PMID:19244447
xref: PMID:31157615
is_a: NCBITaxon:1760 ! Actinomycetes
disjoint_from: NCBITaxon:85011 ! Kitasatosporales
relationship: RO:0002162 NCBITaxon:85007 ! Mycobacteriales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:85011
name: Kitasatosporales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1882
synonym: "Streptomycetales" RELATED synonym []
synonym: "Streptomycetes" RELATED synonym []
synonym: "Streptomycineae" RELATED synonym []
synonym: "Streptomycineae Rainey et al. 1997" RELATED synonym []
xref: GC_ID:11
xref: PMID:19244447
is_a: NCBITaxon:1760 ! Actinomycetes
relationship: RO:0002162 NCBITaxon:85011 ! Kitasatosporales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:8504
name: Lepidosauria
namespace: ncbi_taxonomy
synonym: "lepidosaurs" EXACT OMO:0003003 []
synonym: "lizards & snakes" EXACT genbank_common_name []
synonym: "lizards & snakes" RELATED blast_name []
synonym: "reptiles" RELATED in_part []
synonym: "Reptilia" RELATED in_part []
xref: GC_ID:1
xref: PMID:22982760
is_a: NCBITaxon:32561 ! Sauria
relationship: RO:0002162 NCBITaxon:8504 ! Lepidosauria
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:8509
name: Squamata
namespace: ncbi_taxonomy
synonym: "squamates" EXACT genbank_common_name []
xref: GC_ID:1
xref: PMID:16286089
xref: PMID:22982760
xref: PMID:23627680
is_a: NCBITaxon:8504 ! Lepidosauria
relationship: RO:0002162 NCBITaxon:8509 ! Squamata
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:851
name: Fusobacterium nucleatum
namespace: ncbi_taxonomy
synonym: "Corynebacterium fusiforme" RELATED synonym []
synonym: "Fusibacterium nucleatum" EXACT equivalent_name []
synonym: "Fusiformis fusiformis" RELATED synonym []
synonym: "Fusiformis nucleatus" RELATED synonym []
synonym: "Fusobacterium fusiforme" RELATED synonym []
synonym: "Fusobacterium plauti-vincenti" RELATED synonym []
xref: GC_ID:11
xref: PMID:28687946
xref: PMID:32949256
xref: PMID:8995811
is_a: NCBITaxon:848 ! Fusobacterium
relationship: RO:0002162 NCBITaxon:851 ! Fusobacterium nucleatum
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:8511
name: Iguania
namespace: ncbi_taxonomy
synonym: "iguanian lizards" EXACT genbank_common_name []
synonym: "Lacertilia" RELATED in_part []
xref: GC_ID:1
xref: PMID:19281946
xref: PMID:9169559
is_a: NCBITaxon:1329911 ! Toxicofera
relationship: RO:0002162 NCBITaxon:8511 ! Iguania
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:85512
name: Dicondylia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:50557 ! Insecta
relationship: RO:0002162 NCBITaxon:85512 ! Dicondylia
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:85962
name: Helicobacter pylori 26695
namespace: ncbi_taxonomy
synonym: "Helicobacter pylori (strain 26695)" EXACT equivalent_name []
synonym: "Helicobacter pylori ATCC 700392" RELATED synonym []
synonym: "Helicobacter pylori KE26695" RELATED synonym []
synonym: "Helicobacter pylori str. 26695" EXACT equivalent_name []
synonym: "Helicobacter pylori strain 26695" EXACT equivalent_name []
xref: GC_ID:11
xref: PMID:9252185
is_a: NCBITaxon:210 ! Helicobacter pylori
relationship: RO:0002162 NCBITaxon:85962 ! Helicobacter pylori 26695
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:862507
name: Mus <subgenus>
namespace: ncbi_taxonomy
synonym: "Mus" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:10088 ! Mus <genus>
relationship: RO:0002162 NCBITaxon:862507 ! Mus <subgenus>
property_value: has_rank NCBITaxon:subgenus
property_value: TAXRANK:1000000 TAXRANK:0000009

[Term]
id: NCBITaxon:86661
name: Bacillus cereus group
namespace: ncbi_taxonomy
xref: GC_ID:11
xref: PMID:1715736
xref: PMID:23475340
xref: PMID:26373441
is_a: NCBITaxon:1386 ! Bacillus <firmicutes>
relationship: RO:0002162 NCBITaxon:86661 ! Bacillus cereus group
property_value: has_rank species_group
property_value: TAXRANK:1000000 TAXRANK:0000010

[Term]
id: NCBITaxon:8782
name: Aves
namespace: ncbi_taxonomy
synonym: "avian" RELATED synonym []
synonym: "birds" EXACT genbank_common_name []
synonym: "birds" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:436492 ! Coelurosauria
relationship: RO:0002162 NCBITaxon:8782 ! Aves
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:88036
name: Selaginella moellendorffii
namespace: ncbi_taxonomy
synonym: "Kungiselaginella moellendorffii" RELATED synonym []
synonym: "Selaginella moellendorfii" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:3246 ! Selaginella
relationship: RO:0002162 NCBITaxon:88036 ! Selaginella moellendorffii
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:8825
name: Neognathae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:8782 ! Aves
relationship: RO:0002162 NCBITaxon:8825 ! Neognathae
property_value: has_rank NCBITaxon:infraclass
property_value: TAXRANK:1000000 TAXRANK:0000019

[Term]
id: NCBITaxon:88770
name: Panarthropoda
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:1206794 ! Ecdysozoa
relationship: RO:0002162 NCBITaxon:88770 ! Panarthropoda
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:89593
name: Craniata <chordates>
namespace: ncbi_taxonomy
synonym: "Craniata" EXACT scientific_name []
xref: GC_ID:1
is_a: NCBITaxon:7711 ! Chordata
relationship: RO:0002162 NCBITaxon:89593 ! Craniata <chordates>
property_value: has_rank NCBITaxon:subphylum
property_value: TAXRANK:1000000 TAXRANK:0000008

[Term]
id: NCBITaxon:8976
name: Galliformes
namespace: ncbi_taxonomy
synonym: "landfowls" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:1549675 ! Galloanserae
relationship: RO:0002162 NCBITaxon:8976 ! Galliformes
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:9005
name: Phasianidae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:9099
synonym: "turkeys" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:8976 ! Galliformes
relationship: RO:0002162 NCBITaxon:9005 ! Phasianidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:9030
name: Gallus
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9072 ! Phasianinae
relationship: RO:0002162 NCBITaxon:9030 ! Gallus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:9031
name: Gallus gallus
namespace: ncbi_taxonomy
synonym: "bantam" EXACT OMO:0003003 []
synonym: "chicken" EXACT genbank_common_name []
synonym: "chickens" EXACT OMO:0003003 []
synonym: "Gallus domesticus" EXACT equivalent_name []
synonym: "Gallus gallus domesticus" RELATED synonym []
synonym: "Phasianus gallus" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:9030 ! Gallus
relationship: RO:0002162 NCBITaxon:9031 ! Gallus gallus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:90371
name: Salmonella enterica subsp. enterica serovar Typhimurium
namespace: ncbi_taxonomy
alt_id: NCBITaxon:41532
alt_id: NCBITaxon:59210
alt_id: NCBITaxon:602
synonym: "Bacillus typhimurium" RELATED synonym []
synonym: "Salmonella choleraesuis serotype typhimurium" RELATED synonym []
synonym: "Salmonella enterica 1,4,[5],12,:i:1,2" RELATED synonym []
synonym: "Salmonella enterica ser. typhimurium" RELATED synonym []
synonym: "Salmonella enterica serotype Typhimurium" RELATED synonym []
synonym: "Salmonella enterica serovar Typhimurium" RELATED synonym []
synonym: "Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:1,2" RELATED synonym []
synonym: "Salmonella typhi-murium" RELATED synonym []
synonym: "Salmonella typhimurium" RELATED synonym []
xref: GC_ID:11
xref: PMID:10758910
xref: PMID:15653930
xref: PMID:9336938
is_a: NCBITaxon:59201 ! Salmonella enterica subsp. enterica
relationship: RO:0002162 NCBITaxon:90371 ! Salmonella enterica subsp. enterica serovar Typhimurium

[Term]
id: NCBITaxon:9072
name: Phasianinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9005 ! Phasianidae
relationship: RO:0002162 NCBITaxon:9072 ! Phasianinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:90964
name: Staphylococcaceae
namespace: ncbi_taxonomy
synonym: "Staphylococcaceae Schleifer and Bell 2010" RELATED synonym []
synonym: "Staphylococcus group" EXACT OMO:0003003 []
xref: GC_ID:11
is_a: NCBITaxon:1385 ! Caryophanales
relationship: RO:0002162 NCBITaxon:90964 ! Staphylococcaceae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:91061
name: Bacilli
namespace: ncbi_taxonomy
synonym: "Bacillus/Lactobacillus/Streptococcus group" RELATED synonym []
synonym: "Firmibacteria" RELATED synonym []
xref: GC_ID:11
is_a: NCBITaxon:1239 ! Bacillota
relationship: RO:0002162 NCBITaxon:91061 ! Bacilli
property_value: has_rank NCBITaxon:class
property_value: TAXRANK:1000000 TAXRANK:0000002

[Term]
id: NCBITaxon:911341
name: Heliantheae alliance
namespace: ncbi_taxonomy
xref: GC_ID:1
xref: PMID:18375151
is_a: NCBITaxon:102804 ! Asteroideae
relationship: RO:0002162 NCBITaxon:911341 ! Heliantheae alliance
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:91347
name: Enterobacterales
namespace: ncbi_taxonomy
synonym: "Enterobacteriaceae and related endosymbionts" RELATED synonym []
synonym: "Enterobacteriaceae group" RELATED synonym []
synonym: "Enterobacteriales" RELATED synonym []
synonym: "gamma-3 proteobacteria" RELATED in_part []
xref: GC_ID:11
xref: PMID:27620848
is_a: NCBITaxon:1236 ! Gammaproteobacteria
relationship: RO:0002162 NCBITaxon:91347 ! Enterobacterales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:91561
name: Artiodactyla
namespace: ncbi_taxonomy
synonym: "Cetartiodactyla" RELATED synonym []
synonym: "even-toed ungulates & whales" EXACT genbank_common_name []
synonym: "even-toed ungulates & whales" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:314145 ! Laurasiatheria
disjoint_from: NCBITaxon:9397 ! Chiroptera
disjoint_from: NCBITaxon:9787 ! Perissodactyla
relationship: RO:0002162 NCBITaxon:91561 ! Artiodactyla
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:91827
name: Gunneridae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1437200
synonym: "core eudicots" EXACT equivalent_name []
synonym: "core eudicotyledons" EXACT equivalent_name []
xref: GC_ID:1
is_a: NCBITaxon:71240 ! eudicotyledons
relationship: RO:0002162 NCBITaxon:91827 ! Gunneridae
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:91834
name: rosids incertae sedis
namespace: ncbi_taxonomy
alt_id: NCBITaxon:72024
xref: GC_ID:1
is_a: NCBITaxon:71275 ! rosids
disjoint_from: NCBITaxon:91835 ! fabids
disjoint_from: NCBITaxon:91836 ! malvids
relationship: RO:0002162 NCBITaxon:91834 ! rosids incertae sedis

[Term]
id: NCBITaxon:91835
name: fabids
namespace: ncbi_taxonomy
alt_id: NCBITaxon:41939
alt_id: NCBITaxon:4293
synonym: "eurosids I" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:71275 ! rosids
disjoint_from: NCBITaxon:91836 ! malvids
relationship: RO:0002162 NCBITaxon:91835 ! fabids
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:91836
name: malvids
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:71275 ! rosids
relationship: RO:0002162 NCBITaxon:91836 ! malvids
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:91882
name: campanulids
namespace: ncbi_taxonomy
alt_id: NCBITaxon:41940
alt_id: NCBITaxon:4379
synonym: "euasterids II" RELATED synonym []
xref: GC_ID:1
xref: PMID:12144762
is_a: NCBITaxon:71274 ! asterids
disjoint_from: NCBITaxon:91888 ! lamiids
relationship: RO:0002162 NCBITaxon:91882 ! campanulids
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:91888
name: lamiids
namespace: ncbi_taxonomy
alt_id: NCBITaxon:41935
synonym: "euasterids I" RELATED synonym []
xref: GC_ID:1
xref: PMID:12144762
is_a: NCBITaxon:71274 ! asterids
relationship: RO:0002162 NCBITaxon:91888 ! lamiids
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:9254
name: Prototheria
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:40674 ! Mammalia
relationship: RO:0002162 NCBITaxon:9254 ! Prototheria
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:9255
name: Monotremata
namespace: ncbi_taxonomy
synonym: "egg-laying mammals" EXACT OMO:0003003 []
synonym: "monotremes" EXACT genbank_common_name []
synonym: "monotremes" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:9254 ! Prototheria
relationship: RO:0002162 NCBITaxon:9255 ! Monotremata
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:9256
name: Ornithorhynchidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9255 ! Monotremata
relationship: RO:0002162 NCBITaxon:9256 ! Ornithorhynchidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:9257
name: Ornithorhynchus
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9256 ! Ornithorhynchidae
relationship: RO:0002162 NCBITaxon:9257 ! Ornithorhynchus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:9258
name: Ornithorhynchus anatinus
namespace: ncbi_taxonomy
synonym: "duck-billed platypus" EXACT OMO:0003003 []
synonym: "duckbill platypus" EXACT OMO:0003003 []
synonym: "platypus" EXACT genbank_common_name []
synonym: "Platypus anatinus" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:9257 ! Ornithorhynchus
relationship: RO:0002162 NCBITaxon:9258 ! Ornithorhynchus anatinus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:9263
name: Metatheria
namespace: ncbi_taxonomy
synonym: "Marsupialia" RELATED synonym []
synonym: "marsupials" EXACT genbank_common_name []
synonym: "marsupials" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:32525 ! Theria <mammals>
disjoint_from: NCBITaxon:9347 ! Eutheria
relationship: RO:0002162 NCBITaxon:9263 ! Metatheria
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:9265
name: Didelphidae
namespace: ncbi_taxonomy
synonym: "American opossums" EXACT OMO:0003003 []
synonym: "opossums" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:38605 ! Didelphimorphia
relationship: RO:0002162 NCBITaxon:9265 ! Didelphidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:92860
name: Pleosporales
namespace: ncbi_taxonomy
alt_id: NCBITaxon:134361
alt_id: NCBITaxon:371109
xref: GC_ID:1
is_a: NCBITaxon:451868 ! Pleosporomycetidae
relationship: RO:0002162 NCBITaxon:92860 ! Pleosporales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:93061
name: Staphylococcus aureus subsp. aureus NCTC 8325
namespace: ncbi_taxonomy
synonym: "Staphylococcus aureus NCTC 8325" RELATED synonym []
synonym: "Staphylococcus aureus subsp. aureus str. NCTC 8325" EXACT equivalent_name []
synonym: "Staphylococcus aureus subsp. aureus strain NCTC 8325" EXACT equivalent_name []
xref: GC_ID:11
is_a: NCBITaxon:1280 ! Staphylococcus aureus
relationship: RO:0002162 NCBITaxon:93061 ! Staphylococcus aureus subsp. aureus NCTC 8325
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:9347
name: Eutheria
namespace: ncbi_taxonomy
synonym: "eutherian mammals" EXACT OMO:0003003 []
synonym: "placental mammals" EXACT OMO:0003003 []
synonym: "Placentalia" RELATED synonym []
synonym: "placentals" EXACT genbank_common_name []
synonym: "placentals" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:32525 ! Theria <mammals>
relationship: RO:0002162 NCBITaxon:9347 ! Eutheria
property_value: has_rank NCBITaxon:clade
property_value: TAXRANK:1000000 TAXRANK:0001004

[Term]
id: NCBITaxon:9397
name: Chiroptera
namespace: ncbi_taxonomy
synonym: "bats" EXACT genbank_common_name []
synonym: "bats" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:314145 ! Laurasiatheria
disjoint_from: NCBITaxon:9787 ! Perissodactyla
relationship: RO:0002162 NCBITaxon:9397 ! Chiroptera
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:9443
name: Primates
namespace: ncbi_taxonomy
synonym: "Primata" RELATED synonym []
synonym: "primate" EXACT equivalent_name []
synonym: "primates" EXACT genbank_common_name []
synonym: "primates" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:314146 ! Euarchontoglires
relationship: RO:0002162 NCBITaxon:9443 ! Primates
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:94695
name: Methanosarcinales
namespace: ncbi_taxonomy
synonym: "Halomebacteria" RELATED in_part []
xref: GC_ID:11
xref: PMID:11837318
xref: PMID:12054225
xref: PMID:2431320
is_a: NCBITaxon:224756 ! Methanomicrobia
relationship: RO:0002162 NCBITaxon:94695 ! Methanosarcinales
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:9526
name: Catarrhini
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:314293 ! Simiiformes
relationship: RO:0002162 NCBITaxon:9526 ! Catarrhini
property_value: has_rank NCBITaxon:parvorder
property_value: TAXRANK:1000000 TAXRANK:0000021

[Term]
id: NCBITaxon:9527
name: Cercopithecidae
namespace: ncbi_taxonomy
synonym: "monkey" EXACT OMO:0003003 []
synonym: "monkeys" EXACT OMO:0003003 []
synonym: "Old World monkeys" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:314294 ! Cercopithecoidea
relationship: RO:0002162 NCBITaxon:9527 ! Cercopithecidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:9528
name: Cercopithecinae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9527 ! Cercopithecidae
relationship: RO:0002162 NCBITaxon:9528 ! Cercopithecinae
property_value: has_rank NCBITaxon:subfamily
property_value: TAXRANK:1000000 TAXRANK:0000024

[Term]
id: NCBITaxon:9539
name: Macaca
namespace: ncbi_taxonomy
synonym: "macaque" EXACT OMO:0003003 []
synonym: "macaques" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:9528 ! Cercopithecinae
relationship: RO:0002162 NCBITaxon:9539 ! Macaca
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:9544
name: Macaca mulatta
namespace: ncbi_taxonomy
alt_id: NCBITaxon:36502
synonym: "Cercopithecus mulatta" RELATED synonym []
synonym: "rhesus macaque" EXACT OMO:0003003 []
synonym: "rhesus macaques" EXACT OMO:0003003 []
synonym: "Rhesus monkey" EXACT genbank_common_name []
synonym: "rhesus monkeys" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:9539 ! Macaca
relationship: RO:0002162 NCBITaxon:9544 ! Macaca mulatta
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:9592
name: Gorilla
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:207598 ! Homininae
disjoint_from: NCBITaxon:9596 ! Pan
disjoint_from: NCBITaxon:9605 ! Homo
relationship: RO:0002162 NCBITaxon:9592 ! Gorilla
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:9593
name: Gorilla gorilla
namespace: ncbi_taxonomy
synonym: "gorilla" EXACT OMO:0003003 []
synonym: "Troglodytes gorilla" RELATED synonym []
synonym: "western gorilla" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:9592 ! Gorilla
relationship: RO:0002162 NCBITaxon:9593 ! Gorilla gorilla
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:9595
name: Gorilla gorilla gorilla
namespace: ncbi_taxonomy
synonym: "lowland gorilla" EXACT OMO:0003003 []
synonym: "western lowland gorilla" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:9593 ! Gorilla gorilla
relationship: RO:0002162 NCBITaxon:9595 ! Gorilla gorilla gorilla
property_value: has_rank NCBITaxon:subspecies
property_value: TAXRANK:1000000 TAXRANK:0000023

[Term]
id: NCBITaxon:9596
name: Pan
namespace: ncbi_taxonomy
alt_id: NCBITaxon:317028
alt_id: NCBITaxon:445518
synonym: "chimpanzees" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:207598 ! Homininae
disjoint_from: NCBITaxon:9605 ! Homo
relationship: RO:0002162 NCBITaxon:9596 ! Pan
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:9598
name: Pan troglodytes
namespace: ncbi_taxonomy
synonym: "chimpanzee" EXACT genbank_common_name []
synonym: "Simia troglodytes" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:9596 ! Pan
relationship: RO:0002162 NCBITaxon:9598 ! Pan troglodytes
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:9604
name: Hominidae
namespace: ncbi_taxonomy
synonym: "great apes" EXACT genbank_common_name []
synonym: "Pongidae" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:314295 ! Hominoidea
relationship: RO:0002162 NCBITaxon:9604 ! Hominidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:9605
name: Homo
namespace: ncbi_taxonomy
synonym: "humans" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:207598 ! Homininae
relationship: RO:0002162 NCBITaxon:9605 ! Homo
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:9606
name: Homo sapiens
namespace: ncbi_taxonomy
synonym: "human" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:9605 ! Homo
relationship: RO:0002162 NCBITaxon:9606 ! Homo sapiens
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:9608
name: Canidae
namespace: ncbi_taxonomy
synonym: "dog, coyote, wolf, fox" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:379584 ! Caniformia
relationship: RO:0002162 NCBITaxon:9608 ! Canidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:9611
name: Canis
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9608 ! Canidae
relationship: RO:0002162 NCBITaxon:9611 ! Canis
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:9612
name: Canis lupus
namespace: ncbi_taxonomy
synonym: "gray wolf" EXACT OMO:0003003 []
synonym: "wolf" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:9611 ! Canis
relationship: RO:0002162 NCBITaxon:9612 ! Canis lupus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:9615
name: Canis lupus familiaris
namespace: ncbi_taxonomy
synonym: "Canis borealis" RELATED synonym []
synonym: "Canis canis" RELATED synonym []
synonym: "Canis domesticus" RELATED synonym []
synonym: "Canis familiaris" RELATED synonym []
synonym: "Canis lupus borealis" RELATED synonym []
synonym: "dog" EXACT genbank_common_name []
synonym: "dogs" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:9612 ! Canis lupus
relationship: RO:0002162 NCBITaxon:9615 ! Canis lupus familiaris
property_value: has_rank NCBITaxon:subspecies
property_value: TAXRANK:1000000 TAXRANK:0000023

[Term]
id: NCBITaxon:9681
name: Felidae
namespace: ncbi_taxonomy
synonym: "cat family" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:379583 ! Feliformia
relationship: RO:0002162 NCBITaxon:9681 ! Felidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:9682
name: Felis
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:338152 ! Felinae
relationship: RO:0002162 NCBITaxon:9682 ! Felis
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:9685
name: Felis catus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:36475
synonym: "cat" EXACT OMO:0003003 []
synonym: "cats" EXACT OMO:0003003 []
synonym: "domestic cat" EXACT genbank_common_name []
synonym: "Felis domesticus" RELATED synonym []
synonym: "Felis silvestris catus" RELATED synonym []
xref: GC_ID:1
xref: PMID:17600185
xref: PMID:8581300
xref: PMID:8603894
is_a: NCBITaxon:9682 ! Felis
relationship: RO:0002162 NCBITaxon:9685 ! Felis catus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:9721
name: Cetacea
namespace: ncbi_taxonomy
synonym: "cetaceans" EXACT OMO:0003003 []
synonym: "whale" EXACT OMO:0003003 []
synonym: "whales" EXACT OMO:0003003 []
synonym: "whales & dolphins" EXACT genbank_common_name []
synonym: "whales & dolphins" RELATED blast_name []
synonym: "whales, dolphins & porpoises" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:2653789 ! Whippomorpha
relationship: RO:0002162 NCBITaxon:9721 ! Cetacea
property_value: has_rank NCBITaxon:infraorder
property_value: TAXRANK:1000000 TAXRANK:0000013

[Term]
id: NCBITaxon:9722
name: Odontoceti
namespace: ncbi_taxonomy
synonym: "tooth whales" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:9721 ! Cetacea
relationship: RO:0002162 NCBITaxon:9722 ! Odontoceti
property_value: has_rank NCBITaxon:parvorder
property_value: TAXRANK:1000000 TAXRANK:0000021

[Term]
id: NCBITaxon:976
name: Bacteroidota
namespace: ncbi_taxonomy
alt_id: NCBITaxon:171554
synonym: "\"Bacteroidota\" Whitman et al. 2018" RELATED synonym []
synonym: "Bacteroides-Cytophaga-Flexibacter group" EXACT OMO:0003003 []
synonym: "Bacteroidetes" RELATED synonym []
synonym: "BCF group" EXACT equivalent_name []
synonym: "CFB group" EXACT equivalent_name []
synonym: "CFB group bacteria" EXACT genbank_common_name []
synonym: "CFB group bacteria" RELATED blast_name []
synonym: "Cytophaga-Flexibacter-Bacteroides phylum" EXACT OMO:0003003 []
synonym: "Sphingobacteria" RELATED synonym []
xref: GC_ID:11
xref: PMID:11541229
xref: PMID:11542017
xref: PMID:28066339
is_a: NCBITaxon:68336 ! Bacteroidota/Chlorobiota group
relationship: RO:0002162 NCBITaxon:976 ! Bacteroidota
property_value: has_rank NCBITaxon:phylum
property_value: TAXRANK:1000000 TAXRANK:0000001

[Term]
id: NCBITaxon:9787
name: Perissodactyla
namespace: ncbi_taxonomy
synonym: "odd-toed ungulates" EXACT genbank_common_name []
synonym: "odd-toed ungulates" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:314145 ! Laurasiatheria
relationship: RO:0002162 NCBITaxon:9787 ! Perissodactyla
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003

[Term]
id: NCBITaxon:9788
name: Equidae
namespace: ncbi_taxonomy
synonym: "horses" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:9787 ! Perissodactyla
relationship: RO:0002162 NCBITaxon:9788 ! Equidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:9789
name: Equus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:1225530
alt_id: NCBITaxon:35506
alt_id: NCBITaxon:35507
alt_id: NCBITaxon:35508
alt_id: NCBITaxon:35509
alt_id: NCBITaxon:35510
alt_id: NCBITaxon:475184
synonym: "Amerhippus" RELATED synonym []
synonym: "Asinus" RELATED synonym []
synonym: "Dolichohippus" RELATED synonym []
synonym: "Equus subg. Amerhippus" RELATED synonym []
synonym: "Equus subg. Asinus" RELATED synonym []
synonym: "Equus subg. Dolichohippus" RELATED synonym []
synonym: "Equus subg. Equus" RELATED synonym []
synonym: "Equus subg. Hemionus" RELATED synonym []
synonym: "Equus subg. Hippotigris" RELATED synonym []
synonym: "Equus subgen. Sussemionus" RELATED synonym []
synonym: "Hemionus" RELATED synonym []
synonym: "Hippotigris" RELATED synonym []
synonym: "Sussemionus" RELATED synonym []
xref: GC_ID:1
is_a: NCBITaxon:9788 ! Equidae
relationship: RO:0002162 NCBITaxon:9789 ! Equus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:9796
name: Equus caballus
namespace: ncbi_taxonomy
synonym: "domestic horse" EXACT OMO:0003003 []
synonym: "equine" EXACT OMO:0003003 []
synonym: "Equus przewalskii f. caballus" RELATED synonym []
synonym: "Equus przewalskii forma caballus" RELATED synonym []
synonym: "horse" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:9789 ! Equus
relationship: RO:0002162 NCBITaxon:9796 ! Equus caballus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:980083
name: Camelineae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3700 ! Brassicaceae
disjoint_from: NCBITaxon:981071 ! Brassiceae
relationship: RO:0002162 NCBITaxon:980083 ! Camelineae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:981071
name: Brassiceae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:3700 ! Brassicaceae
relationship: RO:0002162 NCBITaxon:981071 ! Brassiceae
property_value: has_rank NCBITaxon:tribe
property_value: TAXRANK:1000000 TAXRANK:0000025

[Term]
id: NCBITaxon:9821
name: Suidae
namespace: ncbi_taxonomy
alt_id: NCBITaxon:39423
synonym: "boars" EXACT OMO:0003003 []
synonym: "pigs" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:35497 ! Suina
relationship: RO:0002162 NCBITaxon:9821 ! Suidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:9822
name: Sus
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:9821 ! Suidae
relationship: RO:0002162 NCBITaxon:9822 ! Sus
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:9823
name: Sus scrofa
namespace: ncbi_taxonomy
synonym: "pig" EXACT genbank_common_name []
synonym: "pigs" EXACT OMO:0003003 []
synonym: "swine" EXACT OMO:0003003 []
synonym: "wild boar" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:9822 ! Sus
relationship: RO:0002162 NCBITaxon:9823 ! Sus scrofa
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:9845
name: Ruminantia
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:91561 ! Artiodactyla
relationship: RO:0002162 NCBITaxon:9845 ! Ruminantia
property_value: has_rank NCBITaxon:suborder
property_value: TAXRANK:1000000 TAXRANK:0000014

[Term]
id: NCBITaxon:9895
name: Bovidae
namespace: ncbi_taxonomy
xref: GC_ID:1
is_a: NCBITaxon:35500 ! Pecora
relationship: RO:0002162 NCBITaxon:9895 ! Bovidae
property_value: has_rank NCBITaxon:family
property_value: TAXRANK:1000000 TAXRANK:0000004

[Term]
id: NCBITaxon:9903
name: Bos
namespace: ncbi_taxonomy
synonym: "cattle" EXACT genbank_common_name []
xref: GC_ID:1
is_a: NCBITaxon:27592 ! Bovinae
relationship: RO:0002162 NCBITaxon:9903 ! Bos
property_value: has_rank NCBITaxon:genus
property_value: TAXRANK:1000000 TAXRANK:0000005

[Term]
id: NCBITaxon:9913
name: Bos taurus
namespace: ncbi_taxonomy
alt_id: NCBITaxon:272461
synonym: "Bos bovis" RELATED synonym []
synonym: "Bos primigenius taurus" RELATED synonym []
synonym: "bovine" EXACT OMO:0003003 []
synonym: "cow" EXACT OMO:0003003 []
synonym: "dairy cow" EXACT OMO:0003003 []
synonym: "domestic cattle" EXACT genbank_common_name []
synonym: "domestic cow" EXACT OMO:0003003 []
synonym: "ox" EXACT OMO:0003003 []
xref: GC_ID:1
is_a: NCBITaxon:9903 ! Bos
relationship: RO:0002162 NCBITaxon:9913 ! Bos taurus
property_value: has_rank NCBITaxon:species
property_value: TAXRANK:1000000 TAXRANK:0000006

[Term]
id: NCBITaxon:99287
name: Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
namespace: ncbi_taxonomy
alt_id: NCBITaxon:870965
synonym: "Salmonella enterica subsp. enterica serovar Typhimurium LT2" EXACT equivalent_name []
synonym: "Salmonella enterica subsp. enterica serovar Typhimurium strain LT2" EXACT equivalent_name []
synonym: "Salmonella enterica subsp. enterica serovar Typhimurium strain LT2-LTL2" EXACT equivalent_name []
synonym: "Salmonella typhimurium LT2" RELATED synonym []
xref: GC_ID:11
xref: PMID:11677609
is_a: NCBITaxon:90371 ! Salmonella enterica subsp. enterica serovar Typhimurium
relationship: RO:0002162 NCBITaxon:99287 ! Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
property_value: has_rank NCBITaxon:strain
property_value: TAXRANK:1000000 TAXRANK:0001001

[Term]
id: NCBITaxon:9989
name: Rodentia
namespace: ncbi_taxonomy
synonym: "rodent" EXACT OMO:0003003 []
synonym: "rodents" EXACT genbank_common_name []
synonym: "rodents" RELATED blast_name []
xref: GC_ID:1
is_a: NCBITaxon:314147 ! Glires
relationship: RO:0002162 NCBITaxon:9989 ! Rodentia
property_value: has_rank NCBITaxon:order
property_value: TAXRANK:1000000 TAXRANK:0000003