GORULE violations assigned by GOC

Contents

gorule-0000020 Automatic repair of annotations to merged or obsoleted terms

MESSAGES

gorule-0000020

Automatic repair of annotations to merged or obsoleted terms

• total: 36

messages

• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`MGI MGI:1918959 Syde1 located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 1200008N06Rik|mSYD1A protein NCBITaxon:10090 20260428 GOC MGI:MGI:1918959 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`MGI MGI:893577 Stx4a located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C syntaxin 4A (placental) Stx4|Syn-4|Syn4 protein NCBITaxon:10090 20260428 GOC MGI:MGI:893577 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`RGD 1305857 Syde1 located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C synapse defective Rho GTPase activating protein 1 protein NCBITaxon:10116 20260428 GOC RGD:1305857 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`FB FBgn0024980 Syx4 located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C Syntaxin 4 CG2715 protein NCBITaxon:7227 20260428 GOC FB:FBgn0024980 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`FB FBgn0031106 Syx16 located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C Syntaxin 16 CG1467 protein NCBITaxon:7227 20260428 GOC FB:FBgn0031106 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`FB FBgn0036643 Syx8 located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C Syntaxin 8 CG4109 protein NCBITaxon:7227 20260428 GOC FB:FBgn0036643 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`WB WBGene00006371 syx-3 located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C Putative syntaxin-3 F35C8.4|syn-1|syx-3 protein NCBITaxon:6239 20260428 GOC WB:WBGene00006371 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`WB WBGene00006372 syx-2 located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C Putative syntaxin-2 F48F7.2|syn-2|syx-2 protein NCBITaxon:6239 20260428 GOC WB:WBGene00006372 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`WB WBGene00006373 syx-5 located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C Putative syntaxin-5 F55A11.2|syn-3|syx-5 protein NCBITaxon:6239 20260428 GOC WB:WBGene00006373 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`WB WBGene00006374 syx-4 located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C Putative syntaxin-4 T01B11.3|syn-4|syx-4 protein NCBITaxon:6239 20260428 GOC WB:WBGene00006374 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`WB WBGene00006757 unc-18 located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C Acetylcholine regulator unc-18 F27D9.1|lan-2|unc-18 protein NCBITaxon:6239 20260428 GOC WB:WBGene00006757 `
• ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`WB WBGene00015789 syx-6 located_in GO:0098793 GO_REF:0000108 IEA GO:0016081 C Putative syntaxin 6 C15C7.1|syx-6 protein NCBITaxon:6239 20260428 GOC WB:WBGene00015789 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`MGI MGI:1261864 Wipi1 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C WD repeat domain, phosphoinositide interacting 1 4930533H01Rik|D11Ertd498e protein NCBITaxon:10090 20260428 GOC MGI:MGI:1261864 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`MGI MGI:2384822 Ap1ar located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C adaptor-related protein complex 1 associated regulatory protein Gadkin protein NCBITaxon:10090 20260428 GOC MGI:MGI:2384822 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB A0A287AYH0 AP1AR located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C Adaptor related protein complex 1 associated regulatory protein AP1AR protein taxon:9823 20260428 GOC UniProtKB:A0A287AYH0 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB A0A5G2QUZ7 WIPI1 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C WD repeat domain phosphoinositide-interacting protein 1 WIPI1 protein taxon:9823 20260428 GOC UniProtKB:A0A5G2QUZ7 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`ZFIN ZDB-GENE-130530-580 ap1ar located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C adaptor related protein complex 1 associated regulatory protein zmp:0000000577 protein NCBITaxon:7955 20260428 GOC ZFIN:ZDB-GENE-130530-580 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`RGD 1307754 Wipi1 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C WD repeat domain, phosphoinositide interacting 1 protein NCBITaxon:10116 20260428 GOC RGD:1307754 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`RGD 1311435 Ap1ar located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C adaptor-related protein complex 1 associated regulatory protein protein NCBITaxon:10116 20260428 GOC RGD:1311435 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000113 PEP1 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C type I sorting receptor VPS10|VPT1|YBL017C protein NCBITaxon:559292 20260428 GOC SGD:S000000113 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001011 APM2 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C YHL019C protein NCBITaxon:559292 20260428 GOC SGD:S000001011 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000004160 APS1 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C YAP19|YLR170C protein NCBITaxon:559292 20260428 GOC SGD:S000004160 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006180 APM1 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C YAP54|YPL259C protein NCBITaxon:559292 20260428 GOC SGD:S000006180 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006233 APL4 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C AP-1 complex subunit gamma YPR029C protein NCBITaxon:559292 20260428 GOC SGD:S000006233 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000217570 CPX-532 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C Adaptor complex AP-1 APL2:APL4:APM1:APS1 protein_complex taxon:559292 20260428 GOC `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000217571 CPX-533 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C Adaptor complex AP-1R APL2:APL4:APM2:APS1 protein_complex taxon:559292 20260428 GOC `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`PomBase SPBC947.02 apl2 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C AP-1 adaptor complex beta subunit Apl2 protein NCBITaxon:4896 20260428 GOC PomBase:SPBC947.02 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`PomBase SPCP1E11.06 apl4 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C AP-1 adaptor complex gamma subunit Apl4 protein NCBITaxon:4896 20260428 GOC PomBase:SPCP1E11.06 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`ComplexPortal CPX-26625 ap1_schpo-1 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C Adaptor complex AP-1 Adapter complex AP-1|apl2:apl4:apm1:vas2 protein_complex taxon:284812 20260428 GOC `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB Q63HQ0 AP1AR located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C AP-1 complex-associated regulatory protein AP1AR|C4orf16|PRO0971 protein taxon:9606 20260428 GOC UniProtKB:Q63HQ0 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB A2VDU6 MGC155012 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C Uncharacterized protein C4orf16 MGC155012|C4orf16 protein taxon:9913 20260428 GOC UniProtKB:A2VDU6 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB A6H710 MGC159964 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C WD repeat domain phosphoinositide-interacting protein 1 MGC159964 protein taxon:9913 20260428 GOC UniProtKB:A6H710 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB A0A8V0XBT2 AP1AR located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C AP-1 complex-associated regulatory protein AP1AR protein taxon:9031 20260428 GOC UniProtKB:A0A8V0XBT2 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB A0A8I3NZR8 AP1AR located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C Adaptor related protein complex 1 associated regulatory protein AP1AR protein taxon:9615 20260428 GOC UniProtKB:A0A8I3NZR8 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`UniProtKB A0A8I3Q041 WIPI1 located_in GO:0005829 GO_REF:0000108 IEA GO:0048203 C WD repeat domain phosphoinositide-interacting protein 1 WIPI1 protein taxon:9615 20260428 GOC UniProtKB:A0A8I3Q041 `
• WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`PomBase SPBC1604.01 egt1 involved_in GO:0140479 GO_REF:0000108 IEA GO:0061686 P L-histidine N(alpha)-methyltransferase/hercynylcysteine sulfoxide synthase Egt1 SPBC1677.01c|mug158 protein NCBITaxon:4896 20260428 GOC PomBase:SPBC1604.01 `