# GORULE violations assigned by sgd ## SUMMARY This report generated on 2026-05-21 ## Contents [gorule-0000007](#gorule-0000007)[IPI should not be used with GO:0003824 catalytic activity or descendents]{} [gorule-0000013](#gorule-0000013)[Taxon-appropriate annotation check]{} [gorule-0000016](#gorule-0000016)[With/From: IC annotations require a With/From GO ID]{} [gorule-0000018](#gorule-0000018)[IPI annotations require a With/From entry]{} [gorule-0000020](#gorule-0000020)[Automatic repair of annotations to merged or obsoleted terms]{} [gorule-0000046](#gorule-0000046)[The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms.]{} [gorule-0000061](#gorule-0000061)[Allowed gene product to term relations (gp2term)]{} [gorule-0000065](#gorule-0000065)[Annotations to term that are candidates for obsoletion should be produce a warning]{} ## MESSAGES ###gorule-0000007 IPI should not be used with GO:0003824 catalytic activity or descendents * total: 2 #### Messages * WARNING - Violates GO Rule:GORULE:0000007: IPI should not be used with catalytic activity molecular function terms--`SGD S000002861 TSA2 enables GO:0008379 PMID:41807831 IPI SGD:S000004490 F thioredoxin peroxidase TSA2 YDR453C protein NCBITaxon:559292 20260318 SGD SGD:S000002861 ` * WARNING - Violates GO Rule:GORULE:0000007: IPI should not be used with catalytic activity molecular function terms--`SGD S000004490 TSA1 enables GO:0008379 PMID:41807831 IPI SGD:S000002861 F thioredoxin peroxidase TSA1 TPX1|YML028W|ZRG14 protein NCBITaxon:559292 20260318 SGD SGD:S000004490 ` ###gorule-0000013 Taxon-appropriate annotation check * total: 30 #### Messages * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000000036 CDC19 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P pyruvate kinase CDC19 PYK1|YAL038W protein NCBITaxon:559292 20230914 SGD SGD:S000000036 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000000349 ADH5 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P alcohol dehydrogenase ADH5 YBR145W protein NCBITaxon:559292 20230914 SGD SGD:S000000349 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000000400 PGI1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P glucose-6-phosphate isomerase CDC30|YBR196C protein NCBITaxon:559292 20230914 SGD SGD:S000000400 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000000545 GLK1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P glucokinase HOR3|YCL040W protein NCBITaxon:559292 20230914 SGD SGD:S000000545 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000000605 PGK1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P phosphoglycerate kinase YCR012W protein NCBITaxon:559292 20230914 SGD SGD:S000000605 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000000875 ALD5 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P aldehyde dehydrogenase (NAD(P)(+)) ALD5 YER073W protein NCBITaxon:559292 20230914 SGD SGD:S000000875 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000001217 ENO2 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P phosphopyruvate hydratase ENO2 YHR174W protein NCBITaxon:559292 20230914 SGD SGD:S000001217 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000001543 FBA1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P fructose-bisphosphate aldolase FBA1 LOT1|YKL060C protein NCBITaxon:559292 20230914 SGD SGD:S000001543 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000001635 GPM1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P phosphoglycerate mutase GPM1 YKL152C protein NCBITaxon:559292 20230914 SGD SGD:S000001635 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000001949 HXK1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P hexokinase 1 YFR053C protein NCBITaxon:559292 20230914 SGD SGD:S000001949 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000002457 TPI1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P triose-phosphate isomerase TPI1 YDR050C protein NCBITaxon:559292 20230914 SGD SGD:S000002457 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000003153 YGL185C enables GO:0004617 PMID:12525494 ISS SGD:S000000883 F putative hydroxyacid dehydrogenase YGL185C protein NCBITaxon:559292 20150709 SGD SGD:S000003153 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000003222 HXK2 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P hexokinase 2 HEX1|HKB|SCI2|YGL253W protein NCBITaxon:559292 20230914 SGD SGD:S000003222 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000003225 ADH4 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P alcohol dehydrogenase ADH4 NRC465|YGL256W|ZRG5 protein NCBITaxon:559292 20230914 SGD SGD:S000003225 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000003319 PDC6 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P indolepyruvate decarboxylase 6 YGR087C protein NCBITaxon:559292 20230914 SGD SGD:S000003319 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000003424 TDH3 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) TDH3 GLD1|HSP35|HSP36|SSS2|YGR192C protein NCBITaxon:559292 20230914 SGD SGD:S000003424 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000003486 ENO1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P phosphopyruvate hydratase ENO1 HSP48|YGR254W protein NCBITaxon:559292 20230914 SGD SGD:S000003486 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000003588 TDH1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) TDH1 GLD3|YJL052W protein NCBITaxon:559292 20230914 SGD SGD:S000003588 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000003769 TDH2 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) TDH2 GLD2|YJR009C protein NCBITaxon:559292 20230914 SGD SGD:S000003769 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000004034 PDC1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P indolepyruvate decarboxylase 1 YLR044C protein NCBITaxon:559292 20230914 SGD SGD:S000004034 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000004124 PDC5 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P indolepyruvate decarboxylase 5 YLR134W protein NCBITaxon:559292 20230914 SGD SGD:S000004124 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000004369 FBP1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P fructose 1,6-bisphosphate 1-phosphatase ACN8|YLR377C protein NCBITaxon:559292 20230914 SGD SGD:S000004369 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000004688 ADH3 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P alcohol dehydrogenase ADH3 YMR083W protein NCBITaxon:559292 20230914 SGD SGD:S000004688 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000004780 ALD2 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P aldehyde dehydrogenase (NAD(+)) ALD2 YMR170C protein NCBITaxon:559292 20230914 SGD SGD:S000004780 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000004918 ADH2 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P alcohol dehydrogenase ADH2 ADR2|YMR303C protein NCBITaxon:559292 20230914 SGD SGD:S000004918 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000005446 ADH1 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P alcohol dehydrogenase ADH1 ADC1|YOL086C protein NCBITaxon:559292 20230914 SGD SGD:S000005446 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000005874 PYK2 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P pyruvate kinase PYK2 YOR347C protein NCBITaxon:559292 20230914 SGD SGD:S000005874 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000005901 ALD4 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P aldehyde dehydrogenase (NADP(+)) ALD4 ALD7|YOR374W protein NCBITaxon:559292 20230914 SGD SGD:S000005901 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000005982 ALD6 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P aldehyde dehydrogenase (NADP(+)) ALD6 ALD1|YPL061W protein NCBITaxon:559292 20230914 SGD SGD:S000005982 ` * ERROR - Violates GO Rule:GORULE:0000013: Taxon-appropriate annotation check--`SGD S000218025 CPX-554 involved_in GO:0019658 GO_REF:0000123 RCA SGD_PWY:GLUCFERMEN-PWY P 6-phosphofructokinase complex 4xPFK1:4xPFK2 protein_complex taxon:559292 20230914 SGD ` ###gorule-0000016 With/From: IC annotations require a With/From GO ID * total: 3 #### Messages * WARNING - Violates GO Rule:GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column that is also different from the entry in the "GO ID" column--`SGD S000217849 CPX-3238 located_in GO:0005634 GO_REF:0000036 IC GO:0005634,GO:0005634 C SUMO activating enzyme complex AOS1:UBA2 protein_complex taxon:559292 20260211 SGD ` * WARNING - Violates GO Rule:GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column that is also different from the entry in the "GO ID" column--`SGD S000218102 CPX-1712 located_in GO:0005940 PMID:12058072 IC GO:0005940 C Gin4 serine/threonine kinase complex BNI5:CDC3:CDC10:CDC11:CDC12:GIN4:NAP1:SHS1 protein_complex taxon:559292 20260211 SGD ` * WARNING - Violates GO Rule:GORULE:0000016: All IC annotations should include a GO ID in the "With/From" column that is also different from the entry in the "GO ID" column--`SGD S000218204 CPX-1947 located_in GO:0005737 GO_REF:0000036 IC GO:0005737,GO:0005737,GO:0005737 C Methionyl glutamyl tRNA synthetase complex ARC1:GUS1:MES1 protein_complex taxon:559292 20260211 SGD ` ###gorule-0000018 IPI annotations require a With/From entry * total: 5 #### Messages * WARNING - Violates GO Rule:GORULE:0000018: IPI annotations require a With/From entry--`SGD S000217697 CPX-242 located_in GO:0005730 PMID:31994962 IPI C FAL1-SGD1 complex FAL1:SGD1 protein_complex taxon:559292 20260219 SGD ` * WARNING - Violates GO Rule:GORULE:0000018: IPI annotations require a With/From entry--`SGD S000217755 CPX-1501 located_in GO:0015629 PMID:11381095 IPI C Myosin class V complex, MYO4 variant CMD1:MLC1:MYO4 protein_complex taxon:559292 20260218 SGD ` * WARNING - Violates GO Rule:GORULE:0000018: IPI annotations require a With/From entry--`SGD S000217893 CPX-769 located_in GO:0005634 PMID:11551505 IPI C Casein kinase II complex, CKA1 variant 2xCKA1:CKB1:CKB2 protein_complex taxon:559292 20260128 SGD ` * WARNING - Violates GO Rule:GORULE:0000018: IPI annotations require a With/From entry--`SGD S000217901 CPX-776 located_in GO:0005634 PMID:17452446 IPI C CURI complex variant 3 2xCKA2:CKB1:CKB2:IFH1:RRP7:UTP22 protein_complex taxon:559292 20260128 SGD ` * WARNING - Violates GO Rule:GORULE:0000018: IPI annotations require a With/From entry--`SGD S000218144 CPX-2225 located_in GO:0015629 PMID:11381095 IPI C Myosin class V complex, MYO2 variant CMD1:MLC1:MYO2 protein_complex taxon:559292 20260218 SGD ` ###gorule-0000020 Automatic repair of annotations to merged or obsoleted terms * total: 74 #### Messages * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000001562 SMY1 involved_in GO:0006904 PMID:27307583 IGI SGD:S000005853 P YKL079W protein NCBITaxon:559292 20160804 SGD SGD:S000001562 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000002571 SEC1 involved_in GO:0006904 PMID:10427089 IPI SGD:S000003241 P YDR164C protein NCBITaxon:559292 20190806 SGD SGD:S000002571 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000002731 PEP7 involved_in GO:0006904 PMID:9168472 IMP P phosphatidylinositol-3-phosphate binding protein VAC1|VPL21|VPS19|VPT19|YDR323C protein NCBITaxon:559292 20130807 SGD SGD:S000002731 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000004138 PEP3 involved_in GO:0006904 PMID:10978279 IMP P tethering complex subunit PEP3 VAM8|VPS18|VPT18|YLR148W protein NCBITaxon:559292 20130807 SGD SGD:S000004138 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000005332 MSO1 involved_in GO:0006904 PMID:9207091 IDA P YNR049C protein NCBITaxon:559292 20130807 SGD SGD:S000005332 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000005332 MSO1 involved_in GO:0006904 PMID:9207091 IMP P YNR049C protein NCBITaxon:559292 20130807 SGD SGD:S000005332 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000005853 MYO2 involved_in GO:0006904 PMID:27307583 IGI SGD:S000001562 P myosin 2 CDC66|YOR326W protein NCBITaxon:559292 20160804 SGD SGD:S000005853 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000000277 RDH54 located_in GO:0005634 PMID:16831867 IC GO:0032508 C DNA-dependent ATPase RDH54 TID1|YBR073W protein NCBITaxon:559292 20130807 SGD SGD:S000000277 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000001662 COY1 involved_in GO:0048211 PMID:31073031 IDA P CCAAT displacement transcription factor COY1 YKL179C protein NCBITaxon:559292 20200110 SGD SGD:S000001662 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000001856 YPT1 involved_in GO:0048211 PMID:9545229 IMP P Rab family GTPase YPT1 YFL038C protein NCBITaxon:559292 20130807 SGD SGD:S000001856 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000002216 USO1 involved_in GO:0048211 PMID:9545229 IDA P INT1|YDL058W protein NCBITaxon:559292 20130807 SGD SGD:S000002216 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000000335 CCZ1 involved_in GO:0048278 PMID:14662743 IMP P CVT16|YBR131W protein NCBITaxon:559292 20130807 SGD SGD:S000000335 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000003092 MON1 involved_in GO:0048278 PMID:14662743 IMP P guanine nucleotide exchange factor MON1 AUT12|YGL124C protein NCBITaxon:559292 20130807 SGD SGD:S000003092 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000004388 VPS33 involved_in GO:0048278 PMID:9245783 IGI SGD:S000005632 P tethering complex ATP-binding subunit VPS33 CLS14|MET27|PEP14|SLP1|VAM5|VPL25|VPT33|YLR396C protein NCBITaxon:559292 20130807 SGD SGD:S000004388 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000005632 VAM3 involved_in GO:0048278 PMID:9245783 IGI SGD:S000004388 P SNAP receptor VAM3 PTH1|YOR106W protein NCBITaxon:559292 20130807 SGD SGD:S000005632 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000005703 MPC54 involved_in GO:0048278 PMID:20826607 IMP P YOR177C protein NCBITaxon:559292 20130807 SGD SGD:S000005703 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000002235 VAM6 involved_in GO:0099022 PMID:27307091 IDA P CVT4|VPL18|VPL22|VPS39|YDL077C protein NCBITaxon:559292 20160805 SGD SGD:S000002235 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000002487 VPS41 involved_in GO:0099022 PMID:27307091 IDA P CVT8|FET2|SVL2|VAM2|VPL20|YDR080W protein NCBITaxon:559292 20160805 SGD SGD:S000002487 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000004138 PEP3 involved_in GO:0099022 PMID:27307091 IDA P tethering complex subunit PEP3 VAM8|VPS18|VPT18|YLR148W protein NCBITaxon:559292 20160805 SGD SGD:S000004138 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000004388 VPS33 involved_in GO:0099022 PMID:27307091 IDA P tethering complex ATP-binding subunit VPS33 CLS14|MET27|PEP14|SLP1|VAM5|VPL25|VPT33|YLR396C protein NCBITaxon:559292 20160805 SGD SGD:S000004388 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000004844 PEP5 involved_in GO:0099022 PMID:27307091 IDA P tethering complex subunit PEP5 END1|VAM1|VPL9|VPS11|VPT11|YMR231W protein NCBITaxon:559292 20160805 SGD SGD:S000004844 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000005966 VPS16 involved_in GO:0099022 PMID:27307091 IDA P tethering complex subunit VPS16 CVT15|SVL6|VAM9|VPT16|YPL045W protein NCBITaxon:559292 20160805 SGD SGD:S000005966 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000000008 MDM10 involved_in GO:1990456 PMID:19556461 IMP P FUN37|YAL010C protein NCBITaxon:559292 20140825 SGD SGD:S000000008 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000000046 GEM1 involved_in GO:1990456 PMID:21825164 IMP P ERMES complex Ca(2+)-binding regulatory GTPase GEM1 GON1|YAL048C protein NCBITaxon:559292 20140825 SGD SGD:S000000046 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000000046 GEM1 involved_in GO:1990456 PMID:23682313 IMP P ERMES complex Ca(2+)-binding regulatory GTPase GEM1 GON1|YAL048C protein NCBITaxon:559292 20160218 SGD SGD:S000000046 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000003187 MDM34 involved_in GO:1990456 PMID:19556461 IMP P ERMES complex subunit MDM34 MMM2|YGL219C protein NCBITaxon:559292 20140825 SGD SGD:S000003187 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000003929 MMM1 involved_in GO:1990456 PMID:19556461 IMP P ERMES complex subunit MMM1 YLL006W|YME6 protein NCBITaxon:559292 20140825 SGD SGD:S000003929 ` * ERROR - Obsolete class with no replacement:Violates GORULE:0000020--`SGD S000005369 MDM12 involved_in GO:1990456 PMID:19556461 IMP P ERMES complex subunit MDM12 YOL009C protein NCBITaxon:559292 20140825 SGD SGD:S000005369 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000007339 ATP19 contributes_to GO:0046933 PMID:9857174 IC GO:0000276 F F1F0 ATP synthase subunit k YOL077W-A protein NCBITaxon:559292 20141205 SGD SGD:S000007339 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000000663 SED4 involved_in GO:0003400 PMID:21291503 IDA P GTPase-activating protein SED4 YCR067C protein NCBITaxon:559292 20130807 SGD SGD:S000000663 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003290 PEF1 involved_in GO:0003400 PMID:22792405 IDA P YGR058W protein NCBITaxon:559292 20130807 SGD SGD:S000003290 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003290 PEF1 involved_in GO:0003400 PMID:22792405 IMP P YGR058W protein NCBITaxon:559292 20130807 SGD SGD:S000003290 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003290 PEF1 involved_in GO:0003400 PMID:22792405 IPI SGD:S000002354 P YGR058W protein NCBITaxon:559292 20130807 SGD SGD:S000003290 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005309 SEC12 involved_in GO:0003400 PMID:8377826 IDA P Sar family guanine nucleotide exchange factor SEC12 SED2|YNR026C protein NCBITaxon:559292 20130807 SGD SGD:S000005309 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006139 SAR1 involved_in GO:0003400 PMID:14627716 IDA P Arf family GTPase SAR1 YPL218W protein NCBITaxon:559292 20130807 SGD SGD:S000006139 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006139 SAR1 involved_in GO:0003400 PMID:15665868 IDA P Arf family GTPase SAR1 YPL218W protein NCBITaxon:559292 20130807 SGD SGD:S000006139 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006385 SEC23 involved_in GO:0003400 PMID:8451644 IDA P GTPase-activating protein SEC23 YPR181C protein NCBITaxon:559292 20130807 SGD SGD:S000006385 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003074 MLC1 involved_in GO:0006903 PMID:12456647 IMP P YGL106W protein NCBITaxon:559292 20130807 SGD SGD:S000003074 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000217826 CPX-3188 involved_in GO:0006903 PMID:16166638 IMP P Polarisome BNI1:BUD6:MSB3:MSB4:PEA2:SPA2 protein_complex taxon:559292 20180411 SGD ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001466 DAL1 enables GO:0004038 GO_REF:0000123 RCA SGD_PWY:PWY-5697 F allantoinase YIR027C protein NCBITaxon:559292 20230914 SGD part_of(GO:0009442),occurs_in(GO:0005829),has_input(CHEBI:15377),has_input(CHEBI:15678),has_output(CHEBI:15378),has_output(CHEBI:17536) SGD:S000001466 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001466 DAL1 involved_in GO:0009442 GO_REF:0000123 RCA SGD_PWY:PWY-5697 P allantoinase YIR027C protein NCBITaxon:559292 20230914 SGD SGD:S000001466 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001466 DAL1 involved_in GO:0009442 PMID:1803816 IMP P allantoinase YIR027C protein NCBITaxon:559292 20130807 SGD SGD:S000001466 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001466 DAL1 involved_in GO:0009442 PMID:4604238 IMP P allantoinase YIR027C protein NCBITaxon:559292 20130807 SGD SGD:S000001466 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001468 DAL2 enables GO:0004037 GO_REF:0000123 RCA SGD_PWY:PWY-5697 F allantoicase ALC1|YIR029W protein NCBITaxon:559292 20230914 SGD part_of(GO:0009442),occurs_in(GO:0005829),has_input(CHEBI:15377),has_input(CHEBI:17536),has_output(CHEBI:16199),has_output(CHEBI:57296) SGD:S000001468 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001468 DAL2 involved_in GO:0009442 GO_REF:0000123 RCA SGD_PWY:PWY-5697 P allantoicase ALC1|YIR029W protein NCBITaxon:559292 20230914 SGD SGD:S000001468 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001484 MET14 enables GO:0004020 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY F adenylyl-sulfate kinase YKL001C protein NCBITaxon:559292 20230914 SGD part_of(GO:0019379),occurs_in(GO:0005829),has_input(CHEBI:30616),has_input(CHEBI:58243),has_output(CHEBI:15378),has_output(CHEBI:456216),has_output(CHEBI:58339) SGD:S000001484 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001484 MET14 involved_in GO:0019379 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY P adenylyl-sulfate kinase YKL001C protein NCBITaxon:559292 20230914 SGD SGD:S000001484 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001484 MET14 involved_in GO:0019379 PMID:197388 IMP P adenylyl-sulfate kinase YKL001C protein NCBITaxon:559292 20130807 SGD SGD:S000001484 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001926 MET10 contributes_to GO:0004783 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY F sulfite reductase subunit alpha YFR030W protein NCBITaxon:559292 20230914 SGD part_of(GO:0019379),occurs_in(GO:0005829),has_input(CHEBI:15378),has_input(CHEBI:17359),has_input(CHEBI:57783),has_output(CHEBI:15377),has_output(CHEBI:16136),has_output(CHEBI:58349) SGD:S000001926 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001926 MET10 involved_in GO:0019379 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY P sulfite reductase subunit alpha YFR030W protein NCBITaxon:559292 20230914 SGD SGD:S000001926 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003771 MET3 enables GO:0004781 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY F sulfate adenylyltransferase YJR010W protein NCBITaxon:559292 20230914 SGD part_of(GO:0019379),occurs_in(GO:0005829),has_input(CHEBI:15378),has_input(CHEBI:16189),has_input(CHEBI:30616),has_output(CHEBI:29888),has_output(CHEBI:58243) SGD:S000003771 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003771 MET3 involved_in GO:0019379 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY P sulfate adenylyltransferase YJR010W protein NCBITaxon:559292 20230914 SGD SGD:S000003771 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003771 MET3 involved_in GO:0019379 PMID:197388 IMP P sulfate adenylyltransferase YJR010W protein NCBITaxon:559292 20130807 SGD SGD:S000003771 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003898 MET5 contributes_to GO:0004783 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY F sulfite reductase (NADPH) subunit beta ECM17|YJR137C protein NCBITaxon:559292 20230914 SGD part_of(GO:0019379),occurs_in(GO:0005829),has_input(CHEBI:15378),has_input(CHEBI:17359),has_input(CHEBI:57783),has_output(CHEBI:15377),has_output(CHEBI:16136),has_output(CHEBI:58349) SGD:S000003898 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003898 MET5 involved_in GO:0019379 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY P sulfite reductase (NADPH) subunit beta ECM17|YJR137C protein NCBITaxon:559292 20230914 SGD SGD:S000003898 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006371 MET16 enables GO:0004604 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY F phosphoadenylyl-sulfate reductase (thioredoxin) YPR167C protein NCBITaxon:559292 20230914 SGD part_of(GO:0019379),occurs_in(GO:0005829),has_input(CHEBI:33695),has_input(CHEBI:58339),has_output(CHEBI:15378),has_output(CHEBI:17359),has_output(CHEBI:33695),has_output(CHEBI:58343) SGD:S000006371 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006371 MET16 involved_in GO:0019379 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY P phosphoadenylyl-sulfate reductase (thioredoxin) YPR167C protein NCBITaxon:559292 20230914 SGD SGD:S000006371 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006371 MET16 involved_in GO:0019379 PMID:197388 IMP P phosphoadenylyl-sulfate reductase (thioredoxin) YPR167C protein NCBITaxon:559292 20130807 SGD SGD:S000006371 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000006371 MET16 involved_in GO:0019379 PMID:3060034 IDA P phosphoadenylyl-sulfate reductase (thioredoxin) YPR167C protein NCBITaxon:559292 20130807 SGD SGD:S000006371 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000217821 CPX-3163 enables GO:0004783 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY F Sulfite reductase complex (NADPH) 2xMET5:2xMET10 protein_complex taxon:559292 20230914 SGD part_of(GO:0019379),occurs_in(GO:0005829),has_input(CHEBI:15378),has_input(CHEBI:17359),has_input(CHEBI:57783),has_output(CHEBI:15377),has_output(CHEBI:16136),has_output(CHEBI:58349) ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000217821 CPX-3163 involved_in GO:0019379 GO_REF:0000123 RCA SGD_PWY:SO4ASSIM-PWY P Sulfite reductase complex (NADPH) 2xMET5:2xMET10 protein_complex taxon:559292 20230914 SGD ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000217570 CPX-532 located_in GO:0005768 PMID:17003107 IC GO:0048203 C Adaptor complex AP-1 APL2:APL4:APM1:APS1 protein_complex taxon:559292 20260211 SGD ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000217570 CPX-532 located_in GO:0005802 PMID:17003107 IC GO:0048203 C Adaptor complex AP-1 APL2:APL4:APM1:APS1 protein_complex taxon:559292 20260211 SGD ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000217571 CPX-533 located_in GO:0005768 PMID:17003107 IC GO:0048203 C Adaptor complex AP-1R APL2:APL4:APM2:APS1 protein_complex taxon:559292 20260211 SGD ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000217571 CPX-533 located_in GO:0005802 PMID:17003107 IC GO:0048203 C Adaptor complex AP-1R APL2:APL4:APM2:APS1 protein_complex taxon:559292 20260211 SGD ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005983 YPL062W involved_in GO:0051485 PMID:30683746 IMP P YPL062W protein NCBITaxon:559292 20200313 SGD SGD:S000005983 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001841 DAK2 involved_in GO:0061610 PMID:22979944 IGI SGD:S000004535 P dihydroxyacetone kinase YFL053W protein NCBITaxon:559292 20190625 SGD SGD:S000001841 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000001841 DAK2 involved_in GO:0061610 PMID:22979944 IGI SGD:S000004535,SGD:S000005646 P dihydroxyacetone kinase YFL053W protein NCBITaxon:559292 20190625 SGD SGD:S000001841 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000004535 DAK1 involved_in GO:0061610 PMID:22979944 IGI SGD:S000001841 P dihydroxyacetone kinase YML070W protein NCBITaxon:559292 20190625 SGD SGD:S000004535 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000004535 DAK1 involved_in GO:0061610 PMID:22979944 IGI SGD:S000001841,SGD:S000005646 P dihydroxyacetone kinase YML070W protein NCBITaxon:559292 20190625 SGD SGD:S000004535 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005646 GCY1 involved_in GO:0061610 PMID:22979944 IGI SGD:S000001841,SGD:S000004535 P glycerol 2-dehydrogenase (NADP(+)) GCY1 YOR120W protein NCBITaxon:559292 20190625 SGD SGD:S000005646 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005646 GCY1 involved_in GO:0061610 PMID:22979944 IMP P glycerol 2-dehydrogenase (NADP(+)) GCY1 YOR120W protein NCBITaxon:559292 20190625 SGD SGD:S000005646 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000003381 GPC1 acts_upstream_of_or_within GO:0090640 PMID:30514764 IGI SGD:S000005701 P glycerophosphocholine acyltransferase YGR149W protein NCBITaxon:559292 20181220 SGD SGD:S000003381 ` * WARNING - Obsolete class:Violates GORULE:0000020, but was repaired--`SGD S000005701 ALE1 acts_upstream_of_or_within GO:0090640 PMID:30514764 IGI SGD:S000003381 P lysophospholipid acyltransferase LCA1|LPT1|SLC4|YOR175C protein NCBITaxon:559292 20181220 SGD SGD:S000005701 ` ###gorule-0000046 The ‘with’ field (GAF column 8) must be the same as the gene product (GAF column 2) when annotating to ‘self-binding’ terms. * total: 5 #### Messages * WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`SGD S000002861 TSA2 involved_in GO:0051260 PMID:41807831 IDA P thioredoxin peroxidase TSA2 YDR453C protein NCBITaxon:559292 20260318 SGD SGD:S000002861 ` * WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`SGD S000004300 IMH1 enables GO:0042803 PMID:22767516 IDA F SYS3|YLR309C protein NCBITaxon:559292 20260202 SGD part_of(GO:0140450),occurs_in(GO:0005802) SGD:S000004300 ` * WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`SGD S000004396 SEI1 enables GO:0042803 PMID:41309574 IDA F seipin FLD1|YLR404W protein NCBITaxon:559292 20260313 SGD SGD:S000004396 ` * WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`SGD S000004490 TSA1 involved_in GO:0051260 PMID:41807831 IDA P thioredoxin peroxidase TSA1 TPX1|YML028W|ZRG14 protein NCBITaxon:559292 20260318 SGD SGD:S000004490 ` * WARNING - Violates GO Rule:GORULE:0000046: The ‘with’ field (GAF column 8) must be the same as the gene product (GAF colummn 2) when annotating to ‘self-binding’ terms--`SGD S000004889 DSK2 enables GO:0042803 PMID:41673446 IDA F ubiquitin domain-containing protein DSK2 YMR276W protein NCBITaxon:559292 20260327 SGD part_of(GO:1902906) SGD:S000004889 ` ###gorule-0000061 Allowed gene product to term relations (gp2term) * total: 69 #### Messages * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000008 MDM10 is_active_in GO:0032865 PMID:13679517 IPI SGD:S000005369 C FUN37|YAL010C protein NCBITaxon:559292 20220513 SGD SGD:S000000008 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000008 MDM10 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000003929 C FUN37|YAL010C protein NCBITaxon:559292 20220513 SGD SGD:S000000008 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000008 MDM10 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000005369 C FUN37|YAL010C protein NCBITaxon:559292 20220513 SGD SGD:S000000008 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000040 ERV46 is_active_in GO:0061852 PMID:40327065 IDA C retrograde cargo receptor ERV46 FUN9|YAL042W protein NCBITaxon:559292 20260218 SGD SGD:S000000040 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000213 HHF1 is_active_in GO:0000786 PMID:2275823 TAS C histone H4 YBR009C protein NCBITaxon:559292 20240320 SGD SGD:S000000213 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000214 HHT1 is_active_in GO:0000786 PMID:2275823 TAS C histone H3 BUR5|SIN2|YBR010W protein NCBITaxon:559292 20240517 SGD SGD:S000000214 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IMP C YCR082W protein NCBITaxon:559292 20210915 SGD SGD:S000000678 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000000516 C YCR082W protein NCBITaxon:559292 20210915 SGD SGD:S000000678 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000002583 C YCR082W protein NCBITaxon:559292 20210915 SGD SGD:S000000678 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000002856 C YCR082W protein NCBITaxon:559292 20210915 SGD SGD:S000000678 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000003484 C YCR082W protein NCBITaxon:559292 20210915 SGD SGD:S000000678 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000678 AHC2 is_active_in GO:0140671 PMID:21734642 IPI SGD:S000005549 C YCR082W protein NCBITaxon:559292 20210915 SGD SGD:S000000678 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000824 SRB4 is_active_in GO:0070847 PMID:9891034 IDA C MED17|YER022W protein NCBITaxon:559292 20221020 SGD SGD:S000000824 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000000933 RPS26B is_active_in GO:0030686 PMID:25144938 IPI SGD:S000000451 C 40S ribosomal protein eS26 RPS26B YER131W protein NCBITaxon:559292 20200824 SGD SGD:S000000933 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001022 ECM29 is_active_in GO:0000502 PMID:12408819 IDA C YHL030W protein NCBITaxon:559292 20200804 SGD SGD:S000001022 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001054 VPS29 is_active_in GO:0170071 PMID:35466426 IDA C retromer subunit VPS29 PEP11|VPT6|YHR012W protein NCBITaxon:559292 20250819 SGD SGD:S000001054 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001098 RSC30 is_active_in GO:0016586 PMID:32188943 IDA C YHR056C protein NCBITaxon:559292 20220114 SGD SGD:S000001098 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001117 PPE1 is_active_in GO:0005763 PMID:9151978 IDA C phosphoprotein phosphatase methylesterase 1 YHR075C protein NCBITaxon:559292 20221021 SGD SGD:S000001117 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001500 HCS1 is_active_in GO:0033203 PMID:9341218 IDA C ATP-dependent 5'-3' DNA helicase HCS1 DIP1|YKL017C protein NCBITaxon:559292 20211015 SGD SGD:S000001500 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001500 HCS1 is_active_in GO:0043601 PMID:8257676 IDA C ATP-dependent 5'-3' DNA helicase HCS1 DIP1|YKL017C protein NCBITaxon:559292 20211015 SGD SGD:S000001500 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001551 NUP100 is_active_in GO:0005643 PMID:10684247 IDA C FG-nucleoporin NUP100 NSP100|YKL068W protein NCBITaxon:559292 20210315 SGD SGD:S000001551 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001551 NUP100 is_active_in GO:0005643 PMID:8195299 IDA C FG-nucleoporin NUP100 NSP100|YKL068W protein NCBITaxon:559292 20210315 SGD SGD:S000001551 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001845 SWP82 is_active_in GO:0016514 PMID:16204215 IDA C YFL049W protein NCBITaxon:559292 20220113 SGD SGD:S000001845 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000001917 ATG18 is_active_in GO:0170071 PMID:35466426 IDA C phosphoinositide binding protein ATG18 AUT10|CVT18|NMR1|SVP1|YFR021W protein NCBITaxon:559292 20250819 SGD SGD:S000001917 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002200 SIR2 is_active_in GO:0005677 PMID:9122169 IDA C NAD-dependent histone deacetylase SIR2 MAR1|YDL042C protein NCBITaxon:559292 20220112 SGD SGD:S000002200 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002241 RPS16B is_active_in GO:0022627 PMID:9559554 NAS C 40S ribosomal protein uS9 RPS16B YDL083C protein NCBITaxon:559292 20220523 SGD SGD:S000002241 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002268 TMA17 is_active_in GO:0005835 PMID:32160528 IDA C ADC17|YDL110C protein NCBITaxon:559292 20200319 SGD SGD:S000002268 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002367 NHP2 is_active_in GO:0031429 PMID:9843512 IPI UniProtKB:P28007 C snoRNA-binding protein NHP2 YDL208W protein NCBITaxon:559292 20220721 SGD SGD:S000002367 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002469 LCB2 is_active_in GO:0017059 PMID:8058731 IMP C serine C-palmitoyltransferase LCB2 SCS1|TSC1|YDR062W protein NCBITaxon:559292 20250502 SGD SGD:S000002469 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002528 DPB4 is_active_in GO:0008623 PMID:15024052 IDA C DNA polymerase epsilon noncatalytic subunit YDR121W protein NCBITaxon:559292 20230221 SGD SGD:S000002528 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002528 DPB4 is_active_in GO:0008623 PMID:15024052 IPI SGD:S000005831 C DNA polymerase epsilon noncatalytic subunit YDR121W protein NCBITaxon:559292 20230221 SGD SGD:S000002528 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002547 MTQ2 is_active_in GO:0015934 PMID:33166396 IDA C S-adenosylmethionine-dependent methyltransferase YDR140W protein NCBITaxon:559292 20210204 SGD SGD:S000002547 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002730 MRPL35 is_active_in GO:0005762 PMID:12392552 IDA C mitochondrial 54S ribosomal protein mL38 MRPL35 YDR322W|mL38 protein NCBITaxon:559292 20210521 SGD SGD:S000002730 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002730 MRPL35 is_active_in GO:0005762 PMID:9151978 IDA C mitochondrial 54S ribosomal protein mL38 MRPL35 YDR322W|mL38 protein NCBITaxon:559292 20210521 SGD SGD:S000002730 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002904 PUF6 is_active_in GO:0030687 PMID:27458021 IDA C YDR496C protein NCBITaxon:559292 20230126 SGD SGD:S000002904 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000002999 RPL24A is_active_in GO:0022625 PMID:11983894 IDA C 60S ribosomal protein eL24 RPL24A RPL30A|YGL031C protein NCBITaxon:559292 20220706 SGD SGD:S000002999 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003043 MPS2 is_active_in GO:0034993 PMID:32967926 IDA C MMC1|YGL075C protein NCBITaxon:559292 20210311 SGD part_of(GO:0000781) SGD:S000003043 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003157 RPS26A is_active_in GO:0030686 PMID:25144938 IPI SGD:S000000451 C 40S ribosomal protein eS26 RPS26A RPS26|YGL189C protein NCBITaxon:559292 20210412 SGD SGD:S000003157 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003194 OST5 is_active_in GO:0008250 PMID:12805367 IDA C dolichyl-diphosphooligosaccharide--protein glycotransferase subunit YGL226C-A protein NCBITaxon:559292 20220121 SGD SGD:S000003194 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003345 DAM1 is_active_in GO:0042729 PMID:15640796 IDA C YGR113W protein NCBITaxon:559292 20220620 SGD SGD:S000003345 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003345 DAM1 is_active_in GO:0042729 PMID:15664196 IDA C YGR113W protein NCBITaxon:559292 20220620 SGD SGD:S000003345 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003380 RPL24B is_active_in GO:0022625 PMID:11983894 IDA C 60S ribosomal protein eL24 RPL24B RPL30B|YGR148C protein NCBITaxon:559292 20220706 SGD SGD:S000003380 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003589 PEP8 is_active_in GO:0170071 PMID:35466426 IDA C retromer subunit PEP8 GRD6|VPS26|VPT4|YJL053W protein NCBITaxon:559292 20250819 SGD SGD:S000003589 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003690 VPS35 is_active_in GO:0170071 PMID:35466426 IDA C retromer subunit VPS35 ENV1|GRD9|VPT7|YJL154C protein NCBITaxon:559292 20250819 SGD SGD:S000003690 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003848 EMC2 is_active_in GO:0072546 PMID:19325107 IDA C YJR088C protein NCBITaxon:559292 20220721 SGD SGD:S000003848 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000003937 EMC6 is_active_in GO:0072546 PMID:19325107 IDA C YLL014W protein NCBITaxon:559292 20220721 SGD SGD:S000003937 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004157 RPS31 is_active_in GO:0022627 PMID:18782943 IDA C ubiquitin-40S ribosomal protein eS31 RPS31 fusion protein RPS37|UBI3|YLR167W protein NCBITaxon:559292 20220826 SGD SGD:S000004157 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004157 RPS31 is_active_in GO:0022627 PMID:385049 IDA C ubiquitin-40S ribosomal protein eS31 RPS31 fusion protein RPS37|UBI3|YLR167W protein NCBITaxon:559292 20220826 SGD SGD:S000004157 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004194 QRI5 is_active_in GO:0005763 PMID:28154081 IDA C mitochondrial 37S ribosomal protein mS38 QRI5 COX24|YLR204W|mS38 protein NCBITaxon:559292 20220620 SGD SGD:S000004194 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004313 SFH1 is_active_in GO:0016586 PMID:31672915 IDA C YLR321C protein NCBITaxon:559292 20220113 SGD SGD:S000004313 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004434 SIR3 is_active_in GO:0005677 PMID:9122169 IDA C chromatin-silencing protein SIR3 CMT1|MAR2|STE8|YLR442C protein NCBITaxon:559292 20211122 SGD SGD:S000004434 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004532 ERV41 is_active_in GO:0061852 PMID:40327065 IDA C YML067C protein NCBITaxon:559292 20260218 SGD SGD:S000004532 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004751 RPS16A is_active_in GO:0022627 PMID:9559554 NAS C 40S ribosomal protein uS9 RPS16A YMR143W protein NCBITaxon:559292 20220523 SGD SGD:S000004751 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004911 LCB1 is_active_in GO:0017059 PMID:8058731 IMP C serine C-palmitoyltransferase LCB1 END8|TSC2|YMR296C protein NCBITaxon:559292 20250502 SGD SGD:S000004911 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004950 MRP7 is_active_in GO:0005762 PMID:12392552 IDA C mitochondrial 54S ribosomal protein bL27m MRP7 YNL005C|bL27m protein NCBITaxon:559292 20210521 SGD SGD:S000004950 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004975 HHF2 is_active_in GO:0000786 PMID:2275823 TAS C histone H4 YNL030W protein NCBITaxon:559292 20240320 SGD SGD:S000004975 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004976 HHT2 is_active_in GO:0000786 PMID:2275823 TAS C histone H3 YNL031C protein NCBITaxon:559292 20240517 SGD SGD:S000004976 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004995 SNI445 is_active_in GO:0030686 PMID:41603732 IDA C YNL050C protein NCBITaxon:559292 20260129 SGD SGD:S000004995 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000004995 SNI445 is_active_in GO:0170049 PMID:41603732 IDA C YNL050C protein NCBITaxon:559292 20260129 SGD SGD:S000004995 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005369 MDM12 is_active_in GO:0032865 PMID:13679517 IPI SGD:S000000008 C ERMES complex subunit MDM12 YOL009C protein NCBITaxon:559292 20220513 SGD SGD:S000005369 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005369 MDM12 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000000008 C ERMES complex subunit MDM12 YOL009C protein NCBITaxon:559292 20220513 SGD SGD:S000005369 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005369 MDM12 is_active_in GO:0032865 PMID:17410204 IPI SGD:S000003929 C ERMES complex subunit MDM12 YOL009C protein NCBITaxon:559292 20220513 SGD SGD:S000005369 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005474 PTH4 is_active_in GO:0005762 PMID:25683707 IDA C YOL114C protein NCBITaxon:559292 20221118 SGD SGD:S000005474 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005705 SYC1 is_active_in GO:0005847 PMID:12819204 IDA C cleavage polyadenylation factor subunit SYC1 YOR179C protein NCBITaxon:559292 20210824 SGD SGD:S000005705 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005896 RPS12 is_active_in GO:0022627 PMID:3533916 IDA C 40S ribosomal protein eS12 RPS12 YOR369C protein NCBITaxon:559292 20220826 SGD SGD:S000005896 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000005941 ULP1 is_active_in GO:0005643 PMID:12471376 IDA C SUMO protease ULP1 NIB1|YPL020C protein NCBITaxon:559292 20250508 SGD SGD:S000005941 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000006131 SRP72 is_active_in GO:0005786 PMID:7925282 IDA C signal recognition particle subunit SRP72 YPL210C protein NCBITaxon:559292 20210819 SGD SGD:S000006131 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000006337 SPN1 is_active_in GO:0005665 PMID:32941642 IMP C transcription factor SPN1 IWS1|YPR133C protein NCBITaxon:559292 20230127 SGD SGD:S000006337 ` * WARNING - Violates GO Rule:GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0002432 should be one of BFO:0000050. Repaired to BFO:0000050--`SGD S000028510 SUS1 is_active_in GO:0000124 PMID:14718168 IDA C YBR111W-A protein NCBITaxon:559292 20211122 SGD SGD:S000028510 ` ###gorule-0000065 Annotations to term that are candidates for obsoletion should be produce a warning * total: 210 #### Messages * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000037 CYC3 involved_in GO:0018063 PMID:3034577 IDA P holocytochrome c synthase CYC3 YAL039C protein NCBITaxon:559292 20130807 SGD SGD:S000000037 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000152 PTC3 involved_in GO:0000079 PMID:10580002 IMP P type 2C protein phosphatase PTC3 YBL056W protein NCBITaxon:559292 20130807 SGD SGD:S000000152 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000232 YPK3 involved_in GO:0018105 PMID:25767889 IMP P putative protein kinase YPK3 YBR028C protein NCBITaxon:559292 20170517 SGD has_input(SGD:S000000385),has_input(SGD:S000006011) SGD:S000000232 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000232 YPK3 involved_in GO:0018105 PMID:26582391 IDA P putative protein kinase YPK3 YBR028C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000000385),has_input(SGD:S000006011) SGD:S000000232 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000232 YPK3 involved_in GO:0018105 PMID:26582391 IGI SGD:S000000232,SGD:S000004710 P putative protein kinase YPK3 YBR028C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000000385),has_input(SGD:S000006011) SGD:S000000232 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000232 YPK3 involved_in GO:0018105 PMID:26582391 IMP P putative protein kinase YPK3 YBR028C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000000385),has_input(SGD:S000006011) SGD:S000000232 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000232 YPK3 involved_in GO:0046777 PMID:26582391 IDA P putative protein kinase YPK3 YBR028C protein NCBITaxon:559292 20151215 SGD SGD:S000000232 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000232 YPK3 involved_in GO:0046777 PMID:26582391 IMP P putative protein kinase YPK3 YBR028C protein NCBITaxon:559292 20151215 SGD SGD:S000000232 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000234 RKM3 involved_in GO:0018026 PMID:18957409 IGI SGD:S000002665 P protein-lysine N-methyltransferase YBR030W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000001183) SGD:S000000234 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000234 RKM3 involved_in GO:0018026 PMID:18957409 IGI SGD:S000002665 P protein-lysine N-methyltransferase YBR030W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000005106) SGD:S000000234 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000234 RKM3 involved_in GO:0018026 PMID:18957409 IMP P protein-lysine N-methyltransferase YBR030W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000001183) SGD:S000000234 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000234 RKM3 involved_in GO:0018026 PMID:18957409 IMP P protein-lysine N-methyltransferase YBR030W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000005106) SGD:S000000234 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000234 RKM3 involved_in GO:0018026 PMID:24517342 IMP P protein-lysine N-methyltransferase YBR030W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000001183) SGD:S000000234 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000234 RKM3 involved_in GO:0018026 PMID:24517342 IMP P protein-lysine N-methyltransferase YBR030W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000005106) SGD:S000000234 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000329 PTC4 involved_in GO:0006470 PMID:10580002 IDA P type 2C protein phosphatase PTC4 GCT1|YBR125C protein NCBITaxon:559292 20130807 SGD SGD:S000000329 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000420 YBP1 involved_in GO:0018158 PMID:28628095 IMP P YBR216C protein NCBITaxon:559292 20210504 SGD has_input(SGD:S000001476),has_input(SGD:S000004466) SGD:S000000420 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000421 ATG12 involved_in GO:0006501 PMID:17986448 IDA P APG12|YBR217W protein NCBITaxon:559292 20130807 SGD SGD:S000000421 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000421 ATG12 involved_in GO:0061739 PMID:24485455 IMP P APG12|YBR217W protein NCBITaxon:559292 20180209 SGD SGD:S000000421 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000431 MCX1 involved_in GO:1904287 PMID:25957689 IDA P YBR227C protein NCBITaxon:559292 20160107 SGD SGD:S000000431 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000431 MCX1 involved_in GO:1904287 PMID:25957689 IDA P YBR227C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000002640) SGD:S000000431 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000465 TAE1 involved_in GO:0018016 PMID:20481588 IDA P N-terminal protein methyltransferase NTM1|YBR261C protein NCBITaxon:559292 20130807 SGD SGD:S000000465 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000465 TAE1 involved_in GO:0018016 PMID:20481588 IMP P N-terminal protein methyltransferase NTM1|YBR261C protein NCBITaxon:559292 20130807 SGD SGD:S000000465 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000540 GRX1 involved_in GO:0010731 PMID:20074363 IGI SGD:S000006012 P dithiol glutaredoxin GRX1 YCL035C protein NCBITaxon:559292 20130807 SGD SGD:S000000540 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000548 PDI1 involved_in GO:0036508 PMID:21700223 IDA P protein disulfide isomerase PDI1 MFP1|TRG1|YCL043C protein NCBITaxon:559292 20160517 SGD SGD:S000000548 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000548 PDI1 involved_in GO:1904382 PMID:21700223 IDA P protein disulfide isomerase PDI1 MFP1|TRG1|YCL043C protein NCBITaxon:559292 20160517 SGD SGD:S000000548 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000548 PDI1 involved_in GO:1904382 PMID:21700223 IGI SGD:S000001247 P protein disulfide isomerase PDI1 MFP1|TRG1|YCL043C protein NCBITaxon:559292 20160517 SGD SGD:S000000548 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000548 PDI1 involved_in GO:1904382 PMID:21700223 IMP P protein disulfide isomerase PDI1 MFP1|TRG1|YCL043C protein NCBITaxon:559292 20160517 SGD SGD:S000000548 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000548 PDI1 involved_in GO:1904382 PMID:27053108 IDA P protein disulfide isomerase PDI1 MFP1|TRG1|YCL043C protein NCBITaxon:559292 20160517 SGD SGD:S000000548 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000614 MAK31 involved_in GO:0006474 PMID:11274203 IMP P LSM9|NAA38|SMX1|YCR020C-A protein NCBITaxon:559292 20130807 SGD SGD:S000000614 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000615 HSP30 involved_in GO:0032780 PMID:9250391 IMP P YCR021C|YRO1 protein NCBITaxon:559292 20130807 SGD SGD:S000000615 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000619 PMP1 involved_in GO:0032781 PMID:8063750 IGI SGD:S000002103 P proteolipid ATPase YCR024C-A protein NCBITaxon:559292 20211020 SGD occurs_in(GO:0005886) SGD:S000000619 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000628 BPH1 acts_upstream_of_or_within GO:0006497 PMID:35343566 IMP P YCR032W protein NCBITaxon:559292 20220422 SGD part_of(GO:0006914),occurs_in(GO:0005770),has_input(SGD:S000000174) SGD:S000000628 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000655 YIH1 involved_in GO:0001933 PMID:15126500 IMP P YCR059C protein NCBITaxon:559292 20130807 SGD SGD:S000000655 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000763 RAD23 involved_in GO:0006517 PMID:20016784 IDA P YEL037C protein NCBITaxon:559292 20130807 SGD SGD:S000000763 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000779 MAK10 involved_in GO:0006474 PMID:11274203 IMP P NAA35|YEL053C protein NCBITaxon:559292 20130807 SGD SGD:S000000779 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000792 HPA3 involved_in GO:0006473 PMID:23775086 IDA P D-amino-acid N-acetyltransferase YEL066W protein NCBITaxon:559292 20171215 SGD SGD:S000000792 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000851 TPA1 involved_in GO:0018188 PMID:24550462 IDA P oxidative DNA demethylase YER049W protein NCBITaxon:559292 20200206 SGD has_input(SGD:S000003350),has_input(SGD:S000006336) SGD:S000000851 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000000851 TPA1 involved_in GO:0018188 PMID:31320474 IDA P oxidative DNA demethylase YER049W protein NCBITaxon:559292 20200205 SGD SGD:S000000851 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001031 EFM1 involved_in GO:0018026 PMID:20510667 IMP P protein-lysine N-methyltransferase YHL039W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000006284) SGD:S000001031 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001031 EFM1 involved_in GO:0018026 PMID:22522802 IMP P protein-lysine N-methyltransferase YHL039W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000006284) SGD:S000001031 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001031 EFM1 involved_in GO:0018026 PMID:24517342 IMP P protein-lysine N-methyltransferase YHL039W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000006284) SGD:S000001031 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001055 ARD1 involved_in GO:0006474 PMID:2551674 IDA P peptide alpha-N-acetyltransferase complex A subunit ARD1 NAA10|YHR013C protein NCBITaxon:559292 20130807 SGD SGD:S000001055 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001055 ARD1 involved_in GO:0006474 PMID:2551674 IMP P peptide alpha-N-acetyltransferase complex A subunit ARD1 NAA10|YHR013C protein NCBITaxon:559292 20130807 SGD SGD:S000001055 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001055 ARD1 involved_in GO:0061606 PMID:23043182 IMP P peptide alpha-N-acetyltransferase complex A subunit ARD1 NAA10|YHR013C protein NCBITaxon:559292 20140512 SGD SGD:S000001055 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001117 PPE1 involved_in GO:1990577 PMID:11060018 IMP P phosphoprotein phosphatase methylesterase 1 YHR075C protein NCBITaxon:559292 20221021 SGD SGD:S000001117 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001118 PTC7 involved_in GO:0006470 PMID:23940037 IDA P type 2C protein phosphatase PTC7 YHR076W protein NCBITaxon:559292 20140404 SGD SGD:S000001118 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001149 CDC12 involved_in GO:0001934 PMID:14527412 IDA P septin CDC12 CLA10|PSL7|YHR107C protein NCBITaxon:559292 20230224 SGD SGD:S000001149 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001214 ATG7 involved_in GO:0006501 PMID:11038174 IMP P APG11|APG7|CVT2|YHR171W protein NCBITaxon:559292 20130807 SGD SGD:S000001214 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001214 ATG7 involved_in GO:0006501 PMID:11100732 IMP P APG11|APG7|CVT2|YHR171W protein NCBITaxon:559292 20130807 SGD SGD:S000001214 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001214 ATG7 involved_in GO:0006501 PMID:12965207 IMP P APG11|APG7|CVT2|YHR171W protein NCBITaxon:559292 20130807 SGD SGD:S000001214 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001214 ATG7 involved_in GO:0006501 PMID:15277523 IDA P APG11|APG7|CVT2|YHR171W protein NCBITaxon:559292 20130807 SGD SGD:S000001214 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001214 ATG7 involved_in GO:0006501 PMID:15277523 IMP P APG11|APG7|CVT2|YHR171W protein NCBITaxon:559292 20130807 SGD SGD:S000001214 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001214 ATG7 involved_in GO:0006501 PMID:19398890 IDA P APG11|APG7|CVT2|YHR171W protein NCBITaxon:559292 20170721 SGD has_input(SGD:S000000174) SGD:S000001214 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001225 RGD3 involved_in GO:0043547 PMID:32941095 IDA P YHR182W protein NCBITaxon:559292 20210128 SGD SGD:S000001225 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001247 MNL1 involved_in GO:0036508 PMID:21700223 IDA P alpha-1,2-mannosidase MNL1 HTM1|YHR204W protein NCBITaxon:559292 20160517 SGD SGD:S000001247 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001247 MNL1 involved_in GO:1904382 PMID:19124653 IMP P alpha-1,2-mannosidase MNL1 HTM1|YHR204W protein NCBITaxon:559292 20160517 SGD SGD:S000001247 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001247 MNL1 involved_in GO:1904382 PMID:21700223 IGI SGD:S000000548 P alpha-1,2-mannosidase MNL1 HTM1|YHR204W protein NCBITaxon:559292 20160517 SGD SGD:S000001247 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001247 MNL1 involved_in GO:1904382 PMID:27053108 IDA P alpha-1,2-mannosidase MNL1 HTM1|YHR204W protein NCBITaxon:559292 20160517 SGD SGD:S000001247 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001247 MNL1 involved_in GO:1904382 PMID:27053108 IMP P alpha-1,2-mannosidase MNL1 HTM1|YHR204W protein NCBITaxon:559292 20160517 SGD SGD:S000001247 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001372 HPM1 involved_in GO:0042038 PMID:20864530 IMP P protein-histidine N-methyltransferase MNI1|YIL110W protein NCBITaxon:559292 20170515 SGD has_input(SGD:S000005589) SGD:S000001372 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001477 GTT1 involved_in GO:0010731 PMID:27708136 IMP P bifunctional glutathione transferase/peroxidase YIR038C protein NCBITaxon:559292 20170109 SGD has_input(SGD:S000005613) SGD:S000001477 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001502 RAM2 involved_in GO:0018343 PMID:1763050 IDA P bifunctional protein farnesyltransferase/protein geranylgeranyltransferase YKL019W protein NCBITaxon:559292 20130807 SGD SGD:S000001502 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001502 RAM2 involved_in GO:0018344 PMID:1400380 IDA P bifunctional protein farnesyltransferase/protein geranylgeranyltransferase YKL019W protein NCBITaxon:559292 20130807 SGD SGD:S000001502 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001570 CYT2 involved_in GO:0018063 PMID:1499554 IMP P cytochrome c1 heme lyase CYT2 YKL087C protein NCBITaxon:559292 20130807 SGD SGD:S000001570 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001859 MOB2 involved_in GO:0001934 PMID:12196508 IMP P YFL034C-B|YFL035C|YFL035C-A protein NCBITaxon:559292 20130807 SGD SGD:S000001859 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001903 YFH7 involved_in GO:0016310 PMID:18004758 ISS UniProtKB:P0A6I3 P AIM12|YFR007W protein NCBITaxon:559292 20130807 SGD SGD:S000001903 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000001923 ECO1 involved_in GO:0018393 PMID:18614053 IDA P CTF7|YFR027W protein NCBITaxon:559292 20130807 SGD SGD:S000001923 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002103 PMP2 involved_in GO:0032781 PMID:8063750 IGI SGD:S000000619 P proteolipid ATPase YEL017C-A protein NCBITaxon:559292 20211116 SGD occurs_in(GO:0005886),has_input(SGD:S000002976),has_input(SGD:S000005957) SGD:S000002103 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002198 NAT1 involved_in GO:0006474 PMID:2551674 IDA P peptide alpha-N-acetyltransferase complex A subunit NAT1 AAA1|NAA15|YDL040C protein NCBITaxon:559292 20130807 SGD SGD:S000002198 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002198 NAT1 involved_in GO:0006474 PMID:2551674 IMP P peptide alpha-N-acetyltransferase complex A subunit NAT1 AAA1|NAA15|YDL040C protein NCBITaxon:559292 20130807 SGD SGD:S000002198 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002231 AHK1 involved_in GO:0001933 PMID:26787842 IGI SGD:S000000669,SGD:S000003246,SGD:S000004103,SGD:S000005314 P YDL073W protein NCBITaxon:559292 20230224 SGD part_of(GO:0007232),has_input(SGD:S000003272) SGD:S000002231 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002248 RAM1 involved_in GO:0018343 PMID:1763050 IDA P protein farnesyltransferase DPR1|FUS8|SCG2|SGP2|STE16|YDL090C protein NCBITaxon:559292 20130807 SGD SGD:S000002248 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002288 RPP1B involved_in GO:0045860 PMID:24391917 ISS SGD:S000002239 P ribosomal protein P1 RPP1B RPL44'|RPLA3|YDL130W protein NCBITaxon:559292 20140204 SGD SGD:S000002288 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002291 SRF1 involved_in GO:0043085 PMID:21347278 IMP P phospholipase D regulator YDL133W protein NCBITaxon:559292 20130807 SGD SGD:S000002291 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002340 INH1 involved_in GO:0032780 PMID:12809520 IDA P ATPase inhibitor YDL181W protein NCBITaxon:559292 20130807 SGD SGD:S000002340 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002459 DBF4 involved_in GO:0001934 PMID:19692334 IDA P protein serine/threonine kinase activating protein DBF4 DNA52|LSD7|YDR052C protein NCBITaxon:559292 20230224 SGD has_input(SGD:S000002175) SGD:S000002459 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002459 DBF4 involved_in GO:0001934 PMID:8474449 IGI SGD:S000002175 P protein serine/threonine kinase activating protein DBF4 DNA52|LSD7|YDR052C protein NCBITaxon:559292 20230224 SGD SGD:S000002459 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002459 DBF4 involved_in GO:0001934 PMID:8474449 IMP P protein serine/threonine kinase activating protein DBF4 DNA52|LSD7|YDR052C protein NCBITaxon:559292 20230224 SGD has_input(SGD:S000002175) SGD:S000002459 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002510 STE5 involved_in GO:0001934 PMID:19303851 IDA P HMD3|NUL3|YDR103W protein NCBITaxon:559292 20130807 SGD SGD:S000002510 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002533 SWF1 involved_in GO:0018345 PMID:15973437 IMP P palmitoyltransferase SWF1 PSL10|YDR126W protein NCBITaxon:559292 20170203 SGD has_input(SGD:S000000012) SGD:S000002533 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002533 SWF1 involved_in GO:0018345 PMID:15973437 IMP P palmitoyltransferase SWF1 PSL10|YDR126W protein NCBITaxon:559292 20170203 SGD has_input(SGD:S000000028) SGD:S000002533 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002533 SWF1 involved_in GO:0018345 PMID:15973437 IMP P palmitoyltransferase SWF1 PSL10|YDR126W protein NCBITaxon:559292 20170203 SGD has_input(SGD:S000002876) SGD:S000002533 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002533 SWF1 involved_in GO:0018345 PMID:16751107 IMP P palmitoyltransferase SWF1 PSL10|YDR126W protein NCBITaxon:559292 20130807 SGD SGD:S000002533 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002606 RKM2 involved_in GO:0018023 PMID:17005568 IMP P protein-lysine N-methyltransferase YDR198C protein NCBITaxon:559292 20130807 SGD SGD:S000002606 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002606 RKM2 involved_in GO:0018026 PMID:17005568 IDA P protein-lysine N-methyltransferase YDR198C protein NCBITaxon:559292 20130807 SGD SGD:S000002606 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002665 RKM4 involved_in GO:0018026 PMID:18957409 IGI SGD:S000000234 P ribosomal lysine N-methyltransferase RMS1|SET7|YDR257C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000001183) SGD:S000002665 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002665 RKM4 involved_in GO:0018026 PMID:18957409 IGI SGD:S000000234 P ribosomal lysine N-methyltransferase RMS1|SET7|YDR257C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000005106) SGD:S000002665 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002665 RKM4 involved_in GO:0018026 PMID:18957409 IMP P ribosomal lysine N-methyltransferase RMS1|SET7|YDR257C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000001183) SGD:S000002665 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002665 RKM4 involved_in GO:0018026 PMID:18957409 IMP P ribosomal lysine N-methyltransferase RMS1|SET7|YDR257C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000005106) SGD:S000002665 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002665 RKM4 involved_in GO:0018026 PMID:24517342 IMP P ribosomal lysine N-methyltransferase RMS1|SET7|YDR257C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000001183) SGD:S000002665 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002665 RKM4 involved_in GO:0018026 PMID:24517342 IMP P ribosomal lysine N-methyltransferase RMS1|SET7|YDR257C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000005106) SGD:S000002665 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002672 AKR1 involved_in GO:0018345 PMID:12370247 IDA P palmitoyltransferase AKR1 YDR264C protein NCBITaxon:559292 20130807 SGD SGD:S000002672 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002672 AKR1 involved_in GO:0018345 PMID:16227572 IDA P palmitoyltransferase AKR1 YDR264C protein NCBITaxon:559292 20130807 SGD SGD:S000002672 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002672 AKR1 involved_in GO:0018345 PMID:16227572 IMP P palmitoyltransferase AKR1 YDR264C protein NCBITaxon:559292 20130807 SGD SGD:S000002672 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002672 AKR1 involved_in GO:0018345 PMID:16751107 IMP P palmitoyltransferase AKR1 YDR264C protein NCBITaxon:559292 20130807 SGD SGD:S000002672 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002771 ESC2 acts_upstream_of_or_within GO:0032079 PMID:27694623 IDA P YDR363W protein NCBITaxon:559292 20230413 SGD has_input(SGD:S000218057) SGD:S000002771 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002771 ESC2 acts_upstream_of_or_within GO:0032079 PMID:27694623 IMP P YDR363W protein NCBITaxon:559292 20230413 SGD has_input(SGD:S000218057) SGD:S000002771 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000002867 PFA5 involved_in GO:0018345 PMID:16186255 IDA P palmitoyltransferase PFA5 YDR459C protein NCBITaxon:559292 20130807 SGD SGD:S000002867 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003123 CDC43 involved_in GO:0018344 PMID:2034682 IDA P protein geranylgeranyltransferase type I subunit CDC43 CAL1|YGL155W protein NCBITaxon:559292 20130807 SGD SGD:S000003123 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003148 ATG1 involved_in GO:0018105 PMID:33536246 IMP P serine/threonine protein kinase ATG1 APG1|AUT3|CVT10|YGL180W protein NCBITaxon:559292 20210304 SGD part_of(GO:0006995) SGD:S000003148 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003233 EFM5 involved_in GO:0018023 PMID:25446118 IMP P protein-lysine N-methyltransferase AML1|YGR001C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000006284) SGD:S000003233 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003233 EFM5 involved_in GO:0018023 PMID:26545399 IDA P protein-lysine N-methyltransferase AML1|YGR001C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000006284) SGD:S000003233 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003284 FMP48 involved_in GO:0006468 PMID:16319894 HDA P protein kinase FMP48 YGR052W protein NCBITaxon:559292 20181119 SGD SGD:S000003284 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003284 FMP48 involved_in GO:0006468 PMID:17557329 ISM P protein kinase FMP48 YGR052W protein NCBITaxon:559292 20130807 SGD SGD:S000003284 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003332 MDR1 involved_in GO:0090630 PMID:15574876 IGI SGD:S000000833,SGD:S000003178 P GTPase-activating protein MDR1 GYP2|MIC1|YGR100W protein NCBITaxon:559292 20190813 SGD SGD:S000003332 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003355 PPT1 involved_in GO:0006470 PMID:7925273 IDA P protein serine/threonine phosphatase YGR123C protein NCBITaxon:559292 20130807 SGD SGD:S000003355 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003379 NAT2 involved_in GO:0017196 PMID:8175741 IMP P YGR147C protein NCBITaxon:559292 20130807 SGD SGD:S000003379 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003435 YCH1 involved_in GO:0016311 PMID:19382206 IDA P phosphatase YCH1 YGR203W protein NCBITaxon:559292 20130807 SGD SGD:S000003435 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003441 TRX2 involved_in GO:0080058 PMID:20074363 IDA P thioredoxin TRX2 LMA1|YGR209C protein NCBITaxon:559292 20130807 SGD SGD:S000003441 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003441 TRX2 involved_in GO:0080058 PMID:20074363 IGI SGD:S000004033 P thioredoxin TRX2 LMA1|YGR209C protein NCBITaxon:559292 20130807 SGD SGD:S000003441 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003441 TRX2 involved_in GO:0080058 PMID:27708136 IMP P thioredoxin TRX2 LMA1|YGR209C protein NCBITaxon:559292 20170109 SGD has_input(SGD:S000005613) SGD:S000003441 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003515 UPA1 involved_in GO:0032259 PMID:21858014 IC GO:0008168 P putative methyltransferase YGR283C protein NCBITaxon:559292 20130807 SGD SGD:S000003515 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003515 UPA1 involved_in GO:0032259 PMID:22650761 IC GO:0008168 P putative methyltransferase YGR283C protein NCBITaxon:559292 20130807 SGD SGD:S000003515 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003568 BET4 involved_in GO:0018344 PMID:8232541 IMP P Rab geranylgeranyltransferase BET4 YJL031C protein NCBITaxon:559292 20130807 SGD SGD:S000003568 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003568 BET4 involved_in GO:0018344 PMID:8756702 IDA P Rab geranylgeranyltransferase BET4 YJL031C protein NCBITaxon:559292 20130807 SGD SGD:S000003568 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003580 GYP6 involved_in GO:0090630 PMID:8441469 IDA P GTPase-activating protein GYP6 YJL044C protein NCBITaxon:559292 20190612 SGD SGD:S000003580 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003593 IKS1 involved_in GO:0006468 PMID:16319894 HDA P protein kinase IKS1 YJL057C protein NCBITaxon:559292 20181119 SGD SGD:S000003593 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003700 TPK1 involved_in GO:0018105 PMID:34244791 IDA P cAMP-dependent protein kinase catalytic subunit TPK1 PKA1|SRA3|YJL164C protein NCBITaxon:559292 20210823 SGD part_of(GO:0006303),has_input(SGD:S000004255) SGD:S000003700 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003700 TPK1 involved_in GO:0018105 PMID:34244791 IDA P cAMP-dependent protein kinase catalytic subunit TPK1 PKA1|SRA3|YJL164C protein NCBITaxon:559292 20210823 SGD part_of(GO:0006606),has_input(SGD:S000004255) SGD:S000003700 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003700 TPK1 involved_in GO:0018105 PMID:34244791 IMP P cAMP-dependent protein kinase catalytic subunit TPK1 PKA1|SRA3|YJL164C protein NCBITaxon:559292 20210823 SGD part_of(GO:0006303),has_input(SGD:S000004255) SGD:S000003700 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003700 TPK1 involved_in GO:0018105 PMID:34244791 IMP P cAMP-dependent protein kinase catalytic subunit TPK1 PKA1|SRA3|YJL164C protein NCBITaxon:559292 20210823 SGD part_of(GO:0006606),has_input(SGD:S000004255) SGD:S000003700 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003730 CDC6 involved_in GO:0045736 PMID:11460169 IMP P AAA family ATPase CDC6 YJL194W protein NCBITaxon:559292 20221118 SGD has_input(SGD:S000218090) SGD:S000003730 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003730 CDC6 involved_in GO:0045736 PMID:8930895 IDA P AAA family ATPase CDC6 YJL194W protein NCBITaxon:559292 20221118 SGD has_input(SGD:S000218090) SGD:S000003730 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003823 NTA1 involved_in GO:0031365 PMID:7744855 IMP P amidase DEA1|YJR062C protein NCBITaxon:559292 20190212 SGD SGD:S000003823 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003827 TOR1 involved_in GO:0018105 PMID:26582391 IDA P phosphatidylinositol kinase-related protein kinase TOR1 DRR1|YJR066W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000000232) SGD:S000003827 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003837 CDC11 involved_in GO:0001934 PMID:14527412 IDA P septin CDC11 PSL9|YJR076C protein NCBITaxon:559292 20230224 SGD SGD:S000003837 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003890 EFM3 involved_in GO:0018023 PMID:25086354 IDA P protein-lysine N-methyltransferase YJR129C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000005659) SGD:S000003890 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003890 EFM3 involved_in GO:0018023 PMID:25086354 IMP P protein-lysine N-methyltransferase YJR129C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000005659) SGD:S000003890 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003890 EFM3 involved_in GO:0018023 PMID:25231983 IMP P protein-lysine N-methyltransferase YJR129C protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000005659) SGD:S000003890 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000003892 MNS1 involved_in GO:0035977 PMID:9732283 IMP P mannosyl-oligosaccharide 1,2-alpha-mannosidase YJR131W protein NCBITaxon:559292 20130807 SGD SGD:S000003892 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004033 TRX1 involved_in GO:0080058 PMID:20074363 IDA P thioredoxin TRX1 LMA1|YLR043C protein NCBITaxon:559292 20130807 SGD SGD:S000004033 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004033 TRX1 involved_in GO:0080058 PMID:20074363 IGI SGD:S000003441 P thioredoxin TRX1 LMA1|YLR043C protein NCBITaxon:559292 20130807 SGD SGD:S000004033 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004108 TML25 involved_in GO:0035601 PMID:12080046 IDA P palmitoyl-(protein) hydrolase APT1|YLR118C protein NCBITaxon:559292 20130807 SGD SGD:S000004108 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004108 TML25 involved_in GO:0035601 PMID:12080046 IMP P palmitoyl-(protein) hydrolase APT1|YLR118C protein NCBITaxon:559292 20130807 SGD SGD:S000004108 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004185 NMT1 involved_in GO:0018008 PMID:10570244 TAS P glycylpeptide N-tetradecanoyltransferase NMT1 CDC72|YLR195C protein NCBITaxon:559292 20130807 SGD SGD:S000004185 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004236 ERF2 involved_in GO:0018345 PMID:10490616 IMP P palmitoyltransferase ERF2 YLR246W protein NCBITaxon:559292 20130807 SGD SGD:S000004236 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004236 ERF2 involved_in GO:0018345 PMID:12193598 IDA P palmitoyltransferase ERF2 YLR246W protein NCBITaxon:559292 20130807 SGD SGD:S000004236 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004236 ERF2 involved_in GO:0018345 PMID:16751107 IMP P palmitoyltransferase ERF2 YLR246W protein NCBITaxon:559292 20130807 SGD SGD:S000004236 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004515 GAL80 involved_in GO:0042326 PMID:18957435 IDA P transcription regulator GAL80 YML051W protein NCBITaxon:559292 20230224 SGD SGD:S000004515 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004769 ATG16 involved_in GO:0006501 PMID:17192262 IMP P APG15|APG16|CVT11|SAP18|YMR159C protein NCBITaxon:559292 20130807 SGD SGD:S000004769 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004905 TDA1 involved_in GO:0018105 PMID:22289182 IMP P protein kinase TDA1 YMR291W protein NCBITaxon:559292 20170905 SGD has_input(SGD:S000003222) SGD:S000004905 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004905 TDA1 involved_in GO:0018105 PMID:25593311 IMP P protein kinase TDA1 YMR291W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000003222) SGD:S000004905 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004927 UPA2 involved_in GO:0032259 PMID:21858014 IC GO:0008168 P putative methyltransferase YMR310C protein NCBITaxon:559292 20130807 SGD SGD:S000004927 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000004927 UPA2 involved_in GO:0032259 PMID:22650761 IC GO:0008168 P putative methyltransferase YMR310C protein NCBITaxon:559292 20130807 SGD SGD:S000004927 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005052 YNL108C involved_in GO:0016311 PMID:23569204 IDA P HUF|YNL108C protein NCBITaxon:559292 20140206 SGD SGD:S000005052 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005167 ATG4 involved_in GO:0006501 PMID:11038174 IMP P cysteine protease ATG4 APG4|AUT2|YNL223W protein NCBITaxon:559292 20130807 SGD SGD:S000005167 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005167 ATG4 involved_in GO:0051697 PMID:17632063 IDA P cysteine protease ATG4 APG4|AUT2|YNL223W protein NCBITaxon:559292 20130807 SGD SGD:S000005167 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005270 PFA3 involved_in GO:0018345 PMID:16186255 IDA P palmitoyltransferase PFA3 YNL326C protein NCBITaxon:559292 20130807 SGD SGD:S000005270 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005290 ATG3 involved_in GO:0006501 PMID:11100732 IMP P APG3|AUT1|YNR007C protein NCBITaxon:559292 20130807 SGD SGD:S000005290 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005290 ATG3 involved_in GO:0006501 PMID:15277523 IDA P APG3|AUT1|YNR007C protein NCBITaxon:559292 20130807 SGD SGD:S000005290 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005290 ATG3 involved_in GO:0006501 PMID:15277523 IMP P APG3|AUT1|YNR007C protein NCBITaxon:559292 20130807 SGD SGD:S000005290 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005363 PFA4 involved_in GO:0018345 PMID:16751107 IMP P palmitoyltransferase PFA4 YOL003C protein NCBITaxon:559292 20130807 SGD SGD:S000005363 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005363 PFA4 involved_in GO:0018345 PMID:16818716 IMP P palmitoyltransferase PFA4 YOL003C protein NCBITaxon:559292 20130807 SGD SGD:S000005363 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005376 CMK2 involved_in GO:0006468 PMID:16319894 HDA P calmodulin-dependent protein kinase CMK2 YOL016C protein NCBITaxon:559292 20181119 SGD SGD:S000005376 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005376 CMK2 involved_in GO:0006468 PMID:2061341 IDA P calmodulin-dependent protein kinase CMK2 YOL016C protein NCBITaxon:559292 20130807 SGD SGD:S000005376 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005432 SDH5 involved_in GO:0017013 PMID:19628817 IDA P succinate dehydrogenase assembly factor SDH5 EMI5|YOL071W protein NCBITaxon:559292 20211213 SGD has_input(SGD:S000001631) SGD:S000005432 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005436 MDM20 involved_in GO:0017196 PMID:12783868 IGI SGD:S000001855 P DEC1|NAA25|YOL076W protein NCBITaxon:559292 20150305 SGD SGD:S000005436 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005436 MDM20 involved_in GO:0017196 PMID:12783868 IGI SGD:S000003412 P DEC1|NAA25|YOL076W protein NCBITaxon:559292 20150305 SGD SGD:S000005436 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005436 MDM20 involved_in GO:0017196 PMID:12783868 IGI SGD:S000005023 P DEC1|NAA25|YOL076W protein NCBITaxon:559292 20150305 SGD SGD:S000005436 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005436 MDM20 involved_in GO:0017196 PMID:12783868 IMP P DEC1|NAA25|YOL076W protein NCBITaxon:559292 20130807 SGD SGD:S000005436 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005470 SHR5 involved_in GO:0018345 PMID:12193598 IDA P ERF4|YOL110W protein NCBITaxon:559292 20130807 SGD SGD:S000005470 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005470 SHR5 involved_in GO:0018345 PMID:16751107 IMP P ERF4|YOL110W protein NCBITaxon:559292 20130807 SGD SGD:S000005470 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005560 AKR2 involved_in GO:0018345 PMID:16647879 ISS SGD:S000002672 P putative palmitoyltransferase AKR2 YOR034C protein NCBITaxon:559292 20141002 SGD SGD:S000005560 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005563 CYC2 involved_in GO:0018063 PMID:14514677 IGI SGD:S000005591 P oxidoreductase YOR037W protein NCBITaxon:559292 20181017 SGD SGD:S000005563 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005563 CYC2 involved_in GO:0018063 PMID:16207709 IGI SGD:S000005591 P oxidoreductase YOR037W protein NCBITaxon:559292 20181017 SGD SGD:S000005563 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005616 PTC5 involved_in GO:0070262 PMID:18180296 IMP P type 2C protein phosphatase PTC5 PPP1|YOR090C protein NCBITaxon:559292 20170602 SGD has_input(SGD:S000000980) SGD:S000005616 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005616 PTC5 involved_in GO:0070262 PMID:18180296 IMP P type 2C protein phosphatase PTC5 PPP1|YOR090C protein NCBITaxon:559292 20220826 SGD has_input(UniProtKB:P16387) SGD:S000005616 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005627 RAS1 involved_in GO:0045762 PMID:3891097 IGI SGD:S000001295 P Ras family GTPase RAS1 YOR101W protein NCBITaxon:559292 20140310 SGD has_input(SGD:S000003542) SGD:S000005627 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005627 RAS1 involved_in GO:0045762 PMID:3891097 IGI SGD:S000005042 P Ras family GTPase RAS1 YOR101W protein NCBITaxon:559292 20140310 SGD has_input(SGD:S000003542) SGD:S000005627 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005768 SSP2 involved_in GO:0031954 PMID:23207907 IDA P YOR242C protein NCBITaxon:559292 20200520 SGD has_input(SGD:S000006258) SGD:S000005768 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005768 SSP2 involved_in GO:0031954 PMID:23207907 IDA P YOR242C protein NCBITaxon:559292 20210609 SGD SGD:S000005768 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005768 SSP2 involved_in GO:0031954 PMID:23207907 IMP P YOR242C protein NCBITaxon:559292 20200520 SGD has_input(SGD:S000006258) SGD:S000005768 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005768 SSP2 involved_in GO:0031954 PMID:23207907 IMP P YOR242C protein NCBITaxon:559292 20210609 SGD SGD:S000005768 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005779 NAT5 involved_in GO:0006474 PMID:25886145 IMP P peptide alpha-N-acetyltransferase subunit NAT5 ARD2|NAA50|ROG2|YOR253W protein NCBITaxon:559292 20150512 SGD SGD:S000005779 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005809 YOR283W involved_in GO:0016311 PMID:19753119 IDA P phosphoglycerate mutase YOR283W protein NCBITaxon:559292 20130807 SGD SGD:S000005809 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005897 MRS6 involved_in GO:0018344 PMID:12972569 IMP P GTPase-activating protein MRS6 MSI4|YOR370C protein NCBITaxon:559292 20130807 SGD SGD:S000005897 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005898 GPB1 involved_in GO:0042326 PMID:16278446 IGI SGD:S000000052 P KRH2|YOR371C protein NCBITaxon:559292 20130807 SGD SGD:S000005898 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005935 CIP1 involved_in GO:0001933 PMID:27005485 IGI SGD:S000004069,SGD:S000006177 P YPL014W protein NCBITaxon:559292 20230224 SGD part_of(GO:0000082) SGD:S000005935 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000005935 CIP1 involved_in GO:0001933 PMID:27005485 IMP P YPL014W protein NCBITaxon:559292 20230224 SGD part_of(GO:0000082) SGD:S000005935 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006012 GLR1 involved_in GO:0010731 PMID:20074363 IGI SGD:S000000540 P glutathione-disulfide reductase GLR1 LPG17|YPL091W protein NCBITaxon:559292 20130807 SGD SGD:S000006012 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006017 PNG1 involved_in GO:0006517 PMID:10831608 IDA P peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase YPL096W protein NCBITaxon:559292 20130807 SGD SGD:S000006017 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006017 PNG1 involved_in GO:0006517 PMID:25497214 IMP P peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase YPL096W protein NCBITaxon:559292 20231216 SGD part_of(GO:0036503) SGD:S000006017 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006017 PNG1 involved_in GO:0006517 PMID:27433019 IMP P peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase YPL096W protein NCBITaxon:559292 20160920 SGD has_input(SGD:S000001267),has_input(SGD:S000003429),has_input(SGD:S000003929),has_input(SGD:S000004953) SGD:S000006017 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006021 ATG21 involved_in GO:0006497 PMID:15155809 IMP P HSV1|MAI1|YPL100W protein NCBITaxon:559292 20130807 SGD SGD:S000006021 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006071 YPL150W involved_in GO:0006468 PMID:16319894 HDA P non-specific serine/threonine protein kinase YPL150W protein NCBITaxon:559292 20181119 SGD SGD:S000006071 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006074 RAD53 involved_in GO:0042326 PMID:24130507 IMP P serine/threonine/tyrosine protein kinase RAD53 LSD1|MEC2|SPK1|YPL153C protein NCBITaxon:559292 20140404 SGD part_of(GO:0043247) SGD:S000006074 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006078 TGS1 involved_in GO:0001510 PMID:11983179 IMP P RNA methyltransferase YPL157W protein NCBITaxon:559292 20130807 SGD SGD:S000006078 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006129 RKM1 involved_in GO:0018026 PMID:22522802 IMP P protein-lysine N-methyltransferase YPL208W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000002858) SGD:S000006129 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006129 RKM1 involved_in GO:0018026 PMID:22522802 IMP P protein-lysine N-methyltransferase YPL208W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000004488) SGD:S000006129 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006129 RKM1 involved_in GO:0018027 PMID:16096273 IDA P protein-lysine N-methyltransferase YPL208W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000000183) SGD:S000006129 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006129 RKM1 involved_in GO:0018027 PMID:16096273 IDA P protein-lysine N-methyltransferase YPL208W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000000919) SGD:S000006129 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006129 RKM1 involved_in GO:0018027 PMID:16096273 IMP P protein-lysine N-methyltransferase YPL208W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000000183) SGD:S000006129 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006129 RKM1 involved_in GO:0018027 PMID:16096273 IMP P protein-lysine N-methyltransferase YPL208W protein NCBITaxon:559292 20191106 SGD has_input(SGD:S000000919) SGD:S000006129 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006143 FMP40 involved_in GO:0018117 PMID:30270044 IDA P YPL222W protein NCBITaxon:559292 20211001 SGD part_of(GO:0045454) SGD:S000006143 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006255 MAK3 involved_in GO:0006474 PMID:11274203 IMP P peptide alpha-N-acetyltransferase MAK3 NAA30|YPR051W protein NCBITaxon:559292 20130807 SGD SGD:S000006255 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006277 LTP1 involved_in GO:0006470 PMID:7629177 IDA P tyrosine protein phosphatase LTP1 YPR073C protein NCBITaxon:559292 20130807 SGD SGD:S000006277 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006310 ISR1 involved_in GO:0018105 PMID:32579556 IGI SGD:S000001587 P putative protein kinase ISR1 YPR106W protein NCBITaxon:559292 20200716 SGD has_input(SGD:S000001587) SGD:S000006310 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006310 ISR1 involved_in GO:0018105 PMID:32579556 IMP P putative protein kinase ISR1 YPR106W protein NCBITaxon:559292 20200716 SGD has_input(SGD:S000001587) SGD:S000006310 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006310 ISR1 involved_in GO:0018107 PMID:32579556 IGI SGD:S000001587 P putative protein kinase ISR1 YPR106W protein NCBITaxon:559292 20200716 SGD has_input(SGD:S000001587) SGD:S000006310 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006310 ISR1 involved_in GO:0018107 PMID:32579556 IMP P putative protein kinase ISR1 YPR106W protein NCBITaxon:559292 20200716 SGD has_input(SGD:S000001587) SGD:S000006310 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006335 NAT3 involved_in GO:0017196 PMID:10545125 IMP P peptide alpha-N-acetyltransferase complex B subunit NAT3 NAA20|RAD56|YPR131C protein NCBITaxon:559292 20130807 SGD SGD:S000006335 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006353 NCE102 involved_in GO:0001933 PMID:19564405 IMP P NCE2|YPR149W protein NCBITaxon:559292 20130807 SGD SGD:S000006353 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006380 BET2 involved_in GO:0018344 PMID:8756702 IDA P Rab geranylgeranyltransferase BET2 YPR176C protein NCBITaxon:559292 20130807 SGD SGD:S000006380 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000006397 HPA2 involved_in GO:0006473 PMID:23775086 IDA P histone acetyltransferase KAT10|YPR193C protein NCBITaxon:559292 20171215 SGD SGD:S000006397 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000007232 STF1 involved_in GO:0032780 PMID:12809520 IDA P ATPase-binding protein AIS2|YDL130W-A protein NCBITaxon:559292 20130807 SGD SGD:S000007232 ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000217617 CPX-1197 involved_in GO:0070262 PMID:33317697 IDA P PPG1-FAR complex FAR3:FAR7:FAR8:FAR10:FAR11:PPG1:VPS64 protein_complex taxon:559292 20211112 SGD part_of(GO:1901525),has_input(SGD:S000001408) ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000217803 CPX-21 involved_in GO:0050790 PMID:39913192 IDA P Replication protein A complex RFA1:RFA2:RFA3 protein_complex taxon:559292 20260120 SGD has_input(SGD:S000217801) ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000217803 CPX-21 involved_in GO:0050790 PMID:41851108 IDA P Replication protein A complex RFA1:RFA2:RFA3 protein_complex taxon:559292 20260320 SGD ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000217875 CPX-608 involved_in GO:0140067 PMID:34140538 IDA P ADA complex ADA2:AHC1:AHC2:GCN5:NGG1:SGF29 protein_complex taxon:559292 20221026 SGD ` * WARNING - Violates GO Rule:GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed--`SGD S000218091 CPX-1702 involved_in GO:0032781 PMID:34471130 IDA P CLB5-CDC28 kinase complex CDC28:CLB5 protein_complex taxon:559292 20220429 SGD has_input(SGD:S000003502) `