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RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0310\tLmjF.01.0310\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3280\tC\tacidocalcisomal exopolyphosphatase, putative\tLmjF01.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0310\tLmjF.01.0310\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.3280\tC\tacidocalcisomal exopolyphosphatase, putative\tLmjF01.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0315\tLmjF.01.0315\t\tGO:0005783\tPMID:17319967\tTAS\t\tC\thypothetical protein, conserved\tLmjF01.0315\tmRNA\ttaxon:347515\t20090506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0320\tLmjF.01.0320\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3760\tC\tpoly(A) export protein, putative\tLmjF01.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0320\tLmjF.01.0320\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.3760\tC\tpoly(A) export protein, putative\tLmjF01.0320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0330\tLmjF.01.0330\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.3770\tC\thypothetical protein, conserved\tLmjF01.0330\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0330\tLmjF.01.0330\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.3770\tC\thypothetical protein, conserved\tLmjF01.0330\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0335\tMPC1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3780\tC\tMitochondrial pyruvate carrier 1\tLmjF01.0335\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0335\tMPC1\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3780\tC\tMitochondrial pyruvate carrier 1\tLmjF01.0335\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0335\tMPC1\t\tGO:0031966\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3780\tC\tMitochondrial pyruvate carrier 1\tLmjF01.0335\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0335\tMPC1\t\tGO:1902361\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3780\tP\tMitochondrial pyruvate carrier 1\tLmjF01.0335\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0350\tLmjF.01.0350\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3800\tC\thypothetical protein, conserved\tLmjF01.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0350\tLmjF.01.0350\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3800\tC\thypothetical protein, conserved\tLmjF01.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0350\tLmjF.01.0350\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3800\tC\thypothetical protein, conserved\tLmjF01.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0350\tLmjF.01.0350\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3800\tC\thypothetical protein, conserved\tLmjF01.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0350\tLmjF.01.0350\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3800\tP\thypothetical protein, conserved\tLmjF01.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0360\tLmjF.01.0360\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3840\tC\thypothetical protein, conserved\tLmjF01.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0370\tLmjF.01.0370\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3850\tC\tProtein of unknown function (DUF788), putative\tLmjF01.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0370\tLmjF.01.0370\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3850\tC\tProtein of unknown function (DUF788), putative\tLmjF01.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0380\tLmjF.01.0380\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3860\tC\tDyggve-Melchior-Clausen syndrome protein, 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0410\tLmjF.01.0410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.3990\tC\tribosomal protein S7, putative\tLmjF01.0410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0420\tLmjF.01.0420\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.3990\tC\tribosomal protein S7, putative\tLmjF01.0420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0430\tLmjF.01.0430\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4050\tC\tRing finger domain/Zn-finger in ubiquitin-hydrolases and other protein, putative\tLmjF01.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0450\tPNC1\t\tGO:0005829\tPMID:21819459\tISO\tGeneDB:LinJ.01.0470\tC\tnicotinamidase, putative\tLmjF01.0450\tmRNA\ttaxon:347515\t20110905\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0450\tPNC1\t\tGO:0008936\tPMID:21819459\tISO\tGeneDB:LinJ.01.0470\tF\tnicotinamidase, putative\tLmjF01.0450\tmRNA\ttaxon:347515\t20110905\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0450\tPNC1\t\tGO:0009435\tPMID:21819459\tISO\tGeneDB:LinJ.01.0470\tP\tnicotinamidase, putative\tLmjF01.0450\tmRNA\ttaxon:347515\t20110905\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0460\tLmjF.01.0460\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4080\tF\tconserved protein\tLmjF01.0460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0460\tLmjF.01.0460\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.4080\tC\tconserved protein\tLmjF01.0460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0460\tLmjF.01.0460\t\tGO:0009372\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4080\tP\tconserved protein\tLmjF01.0460\tmRNA\ttaxon:347515\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0460\tLmjF.01.0460\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4080\tP\tconserved protein\tLmjF01.0460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0460\tLmjF.01.0460\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4080\tP\tconserved protein\tLmjF01.0460\tmRNA\ttaxon:347515\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0470\tLmjF.01.0470\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.4210\tC\tfatty acyl CoA syntetase 1, putative\tLmjF01.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0470\tLmjF.01.0470\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.4210\tC\tfatty acyl CoA syntetase 1, putative\tLmjF01.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0470\tLmjF.01.0470\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.4210\tC\tfatty acyl CoA syntetase 1, putative\tLmjF01.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0490\tLmjF.01.0490\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.4210\tC\tlong-chain-fatty-acid-CoA ligase, putative\tLmjF01.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0490\tLmjF.01.0490\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.4210\tC\tlong-chain-fatty-acid-CoA ligase, putative\tLmjF01.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0490\tLmjF.01.0490\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.4210\tC\tlong-chain-fatty-acid-CoA ligase, putative\tLmjF01.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF01.0500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0520\tLmjF.01.0520\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.4210\tC\tlong-chain-fatty-acid-CoA ligase, putative\tLmjF01.0520\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0520\tLmjF.01.0520\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.4210\tC\tlong-chain-fatty-acid-CoA ligase, putative\tLmjF01.0520\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0520\tLmjF.01.0520\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.4210\tC\tlong-chain-fatty-acid-CoA ligase, putative\tLmjF01.0520\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0560\tLmjF.01.0560\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4300\tC\tpre-mRNA processing factor 3 (PRP3)/Protein of unknown function (DUF1115), putative\tLmjF01.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0590\tKREL1\t\tGO:0009451\tPMID:11134327|GO_REF:0000024\tISO\tGeneDB:Tb927.9.4360|GeneDB:Tb09.160.2970\tP\tmitochondrial RNA editing ligase 1\tLmjF01.0590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0590\tKREL1\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4360\tC\tmitochondrial RNA editing ligase 1\tLmjF01.0590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0590\tKREL1\t\tGO:0031019\tPMID:20018860|GO_REF:0000024\tISO\tGeneDB:Tb927.9.4360|GeneDB:Tb09.160.2970\tC\tmitochondrial RNA editing ligase 1\tLmjF01.0590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0590\tKREL1\t\tGO:0031019\tPMID:11134327\tISO\tGeneDB:Tb09.160.2970\tC\tmitochondrial RNA editing ligase 1\tLmjF01.0590\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0590\tKREL1\t\tGO:0009451\tPMID:11134327\tISO\tGeneDB:Tb09.160.2970\tP\tmitochondrial RNA editing ligase 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0610\tLmjF.01.0610\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4390\tC\tDNA-damage inducible protein DDI1-like protein\tLmjF01.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0640\tHSP70.a\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4500\tC\tHSP70-like protein\tLmjF01.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0650\tMPPB\t\tGO:0004222\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4520\tF\tmitochondrial-processing peptidase subunit beta, putative\tLmjF01.0650\tmRNA\ttaxon:347515\t20141205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0650\tMPPB\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4520\tC\tmitochondrial-processing peptidase subunit beta, putative\tLmjF01.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0650\tMPPB\t\tGO:0017087\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4520\tC\tmitochondrial-processing peptidase subunit beta, putative\tLmjF01.0650\tmRNA\ttaxon:347515\t20141205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0650\tMPPB\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4520\tC\tmitochondrial-processing peptidase subunit beta, putative\tLmjF01.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0650\tMPPB\t\tGO:0030150\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4520\tP\tmitochondrial-processing peptidase subunit beta, putative\tLmjF01.0650\tmRNA\ttaxon:347515\t20141205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0660\tLmjF.01.0660\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4530\tC\thypothetical protein, conserved\tLmjF01.0660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0710\tLmjF.01.0710\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4620\tC\tubiquitin activating enzyme, putative\tLmjF01.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0710\tLmjF.01.0710\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4620\tC\tubiquitin activating enzyme, putative\tLmjF01.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0720\tLmjF.01.0720\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4630\tC\thypothetical protein, conserved\tLmjF01.0720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0720\tLmjF.01.0720\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4630\tC\thypothetical protein, conserved\tLmjF01.0720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0220\tSCA1\t\tGO:0005796\tPMID:10684651\tEXP\t\tC\tphosphoglycan beta 1,2 arabinosyltransferase\tLmjF02.0220\tmRNA\ttaxon:347515\t20100611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0220\tSCA1\t\tGO:0006012\tPMID:16272216\tEXP\t\tP\tphosphoglycan beta 1,2 arabinosyltransferase\tLmjF02.0220\tmRNA\ttaxon:347515\t20100611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0370\tLmjF.02.0370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2440\tC\tproteasome regulatory non-ATPase subunit 6, putative\tLmjF02.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0370\tLmjF.02.0370\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2440\tC\tproteasome regulatory non-ATPase subunit 6, putative\tLmjF02.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0410\tKREPA1\t\tGO:0070705\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2470\tP\tMitochondrial protein 81\tLmjF02.0410|MP81\tmRNA\ttaxon:347515\t20100721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0410\tKREPA1\t\tGO:0070706\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2470\tP\tMitochondrial protein 81\tLmjF02.0410|MP81\tmRNA\ttaxon:347515\t20100721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0410\tKREPA1\t\tGO:1900864\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2470\tP\tMitochondrial protein 81\tLmjF02.0410|MP81\tmRNA\ttaxon:347515\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0430\tLmjF.02.0430\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2500\tC\tserine peptidase, Clan S-, family S54, putative\tLmjF02.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0450\tLmjF.02.0450\t\tGO:0005741\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2520\tC\tvoltage-dependent anion-selective channel, putative\tLmjF02.0450\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0450\tLmjF.02.0450\t\tGO:0006839\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2520\tP\tvoltage-dependent anion-selective channel, putative\tLmjF02.0450\tmRNA\ttaxon:347515\t20101007\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0450\tLmjF.02.0450\t\tGO:0031307\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2520\tC\tvoltage-dependent anion-selective channel, putative\tLmjF02.0450\tmRNA\ttaxon:347515\t20101007\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0460\tVDAC\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2520\tC\tvoltage-dependent anion-selective channel, putative\tLmjF02.0460|Porin\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0460\tVDAC\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2510\tC\tvoltage-dependent anion-selective channel, putative\tLmjF02.0460|Porin\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0460\tVDAC\t\tGO:0006811\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2510\tP\tvoltage-dependent anion-selective channel, putative\tLmjF02.0460|Porin\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0460\tVDAC\t\tGO:0006839\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2510\tP\tvoltage-dependent anion-selective channel, putative\tLmjF02.0460|Porin\tmRNA\ttaxon:347515\t20101007\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0460\tVDAC\t\tGO:0008308\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2510\tF\tvoltage-dependent anion-selective channel, putative\tLmjF02.0460|Porin\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0460\tVDAC\t\tGO:0015288\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2510\tF\tvoltage-dependent anion-selective channel, putative\tLmjF02.0460|Porin\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0460\tVDAC\t\tGO:0016281\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2510\tC\tvoltage-dependent anion-selective channel, putative\tLmjF02.0460|Porin\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF02.0460|Porin\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0480\tLmjF.02.0480\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2540\tC\thypothetical protein, conserved\tLmjF02.0480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0500\tLmjF.02.0500\t\tGO:0005829\tPMID:18364711\tRCA\t\tC\tglycerate kinase, putative\tLmjF02.0500\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0500\tLmjF.02.0500\t\tGO:0008887\tPMID:18364711\tRCA\t\tF\tglycerate kinase, putative\tLmjF02.0500\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0570\tLmjF.02.0570\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2720\tC\tprotein kinase, putative\tLmjF02.0570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0570\tLmjF.02.0570\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2720\tC\tprotein kinase, putative\tLmjF02.0570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0570\tLmjF.02.0570\t\tGO:0009372\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2720\tP\tprotein kinase, putative\tLmjF02.0570\tmRNA\ttaxon:347515\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0570\tLmjF.02.0570\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2720\tP\tprotein kinase, putative\tLmjF02.0570\tmRNA\ttaxon:347515\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0620\tLmjF.02.0620\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2910\tC\thypothetical protein, conserved\tLmjF02.0620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0650\tMIC32\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2940\tC\tMICOS complex subunit 32, putative\tLmjF02.0650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0650\tMIC32\t\tGO:0061617\tPMID:30415698\tISO\tGeneDB:Tb927.2.2940\tC\tMICOS complex subunit 32, putative\tLmjF02.0650\tmRNA\ttaxon:347515\t20181211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0660\tLmjF.02.0660\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2950\tC\tNop14-like family, putative\tLmjF02.0660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0660\tLmjF.02.0660\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2950\tC\tNop14-like family, putative\tLmjF02.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0670\tLmjF.02.0670\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2970\tC\tmitochondrial carrier protein, putative\tLmjF02.0670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0690\tLmjF.02.0690\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.3000\tC\thypothetical protein, conserved\tLmjF02.0690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0700\tLmjF.02.0700\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.3020\tC\thypothetical protein, conserved\tLmjF02.0700\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0700\tLmjF.02.0700\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3020\tP\thypothetical protein, conserved\tLmjF02.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0710\tLmjF.02.0710\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.3030\tC\tATP-dependent Clp protease subunit, heat shock protein 78 (HSP78), putative\tLmjF02.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0740\tDCP\t\tGO:0008241\tPMID:20039100\tISO\tGeneDB:LinJ.02.0710\tF\tdipeptylcarboxypeptidase, putative\tLmjF02.0740\tmRNA\ttaxon:347515\t20100204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0060\tLmjF.03.0060\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3080\tC\tMet-10+ like-protein, putative\tLmjF03.0060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0080\tGAT\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3100\tC\tglycerol-3-phosphate acyl transferase\tLmjF03.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0080\tGAT\t\tGO:0008654\tPMID:15819633\tIDA\t\tP\tglycerol-3-phosphate acyl transferase\tLmjF03.0080\tmRNA\ttaxon:347515\t20140120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0080\tGAT\t\tGO:0043772\tPMID:15819633\tIDA\t\tF\tglycerol-3-phosphate acyl transferase\tLmjF03.0080\tmRNA\ttaxon:347515\t20140120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0090\tpril\t\tGO:0003896\tGO_REF:0000011\tISM\tInterPro:IPR007238\tF\tDNA primase large subunit, putative\tLmjF03.0090\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0090\tpril\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3110\tC\tDNA primase large subunit, putative\tLmjF03.0090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0090\tpril\t\tGO:0005658\tGO_REF:0000011\tISM\tInterPro:IPR007238\tC\tDNA primase large subunit, putative\tLmjF03.0090\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0090\tpril\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3110\tC\tDNA primase large subunit, putative\tLmjF03.0090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0090\tpril\t\tGO:0006269\tGO_REF:0000011\tISM\tInterPro:IPR007238\tP\tDNA primase large subunit, putative\tLmjF03.0090\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0090\tpril\t\tGO:0044786\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3110\tP\tDNA primase large subunit, putative\tLmjF03.0090\tmRNA\ttaxon:347515\t20140305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0100\tLmjF.03.0100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3120\tC\tcytochrome c oxidase assembly protein, putative\tLmjF03.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0100\tLmjF.03.0100\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3120\tC\tcytochrome c oxidase assembly protein, putative\tLmjF03.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0120\tLmjF.03.0120\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3140\tC\thypothetical protein, conserved\tLmjF03.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0120\tLmjF.03.0120\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3140\tC\thypothetical protein, conserved\tLmjF03.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0120\tLmjF.03.0120\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3140\tP\thypothetical protein, conserved\tLmjF03.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0120\tLmjF.03.0120\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3140\tC\thypothetical protein, conserved\tLmjF03.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0160\tABCF1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3170\tC\tATP-binding cassette protein subfamily F, member 1, putative\tLmjF03.0160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0160\tABCF1\t\tGO:0043492\tPMID:17030997\tISM\t\tF\tATP-binding cassette protein subfamily F, member 1, putative\tLmjF03.0160\tmRNA\ttaxon:347515\t20090608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0190\tLmjF.03.0190\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tU2 splicing auxiliary factor, putative\tLmjF03.0190\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0190\tLmjF.03.0190\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3200\tF\tU2 splicing auxiliary factor, putative\tLmjF03.0190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0190\tLmjF.03.0190\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3200\tC\tU2 splicing auxiliary factor, putative\tLmjF03.0190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0190\tLmjF.03.0190\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3200\tC\tU2 splicing auxiliary factor, putative\tLmjF03.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0200\tLmjF.03.0200\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3210\tC\tdelta-1-pyrroline-5-carboxylate dehydrogenase, putative\tLmjF03.0200\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0200\tLmjF.03.0200\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3210\tC\tdelta-1-pyrroline-5-carboxylate dehydrogenase, putative\tLmjF03.0200\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0200\tLmjF.03.0200\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3210\tC\tdelta-1-pyrroline-5-carboxylate dehydrogenase, putative\tLmjF03.0200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0210\tLmjF.03.0210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3230\tC\tCMGC/MAPK protein kinase, putative\tLmjF03.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0210\tLmjF.03.0210\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3230\tC\tCMGC/MAPK protein kinase, putative\tLmjF03.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0220\tLmjF.03.0220\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3250\tC\thypothetical protein, conserved\tLmjF03.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0230\tLmjF.03.0230\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3260\tC\tlong chain fatty Acyl CoA synthetase, putative\tLmjF03.0230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0230\tLmjF.03.0230\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3260\tC\tlong chain fatty Acyl CoA synthetase, putative\tLmjF03.0230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0230\tLmjF.03.0230\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3260\tC\tlong chain fatty Acyl CoA synthetase, putative\tLmjF03.0230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0240\tLmjF.03.0240\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3270\tC\thypothetical protein, conserved\tLmjF03.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0250\tLmjF.03.0250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3280\tC\tribosomal protein L38, putative\tLmjF03.0250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0250\tLmjF.03.0250\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3280\tC\tribosomal protein L38, putative\tLmjF03.0250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0250\tLmjF.03.0250\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3280\tC\tribosomal protein L38, putative\tLmjF03.0250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0320\tLmjF.03.0320\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3310\tP\thypothetical protein, conserved\tLmjF03.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0330\tLmjF.03.0330\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3320\tC\thypothetical protein, conserved\tLmjF03.0330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0340\tLmjF.03.0340\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3330\tC\tDDRGK domain containing protein, putative\tLmjF03.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0340\tLmjF.03.0340\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3330\tC\tDDRGK domain containing protein, putative\tLmjF03.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0350\tLmjF.03.0350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3340\tC\tprotein kinase, putative\tLmjF03.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0410\tLmjF.03.0410\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3350\tC\tMFS transporter, putative\tLmjF03.0410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0420\tLmjF.03.0420\t\tGO:0004724\tPMID:20551176\tISO\tGeneDB:Tb927.10.3360\tF\tPTP1-interacting protein, 39 kDa, putative\tLmjF03.0420\tmRNA\ttaxon:347515\t20110105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0420\tLmjF.03.0420\t\tGO:0005829\tPMID:20551176\tISO\tGeneDB:Tb927.10.3360\tC\tPTP1-interacting protein, 39 kDa, putative\tLmjF03.0420\tmRNA\ttaxon:347515\t20110105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0420\tLmjF.03.0420\t\tGO:0006470\tPMID:20551176\tISO\tGeneDB:Tb927.10.3360\tP\tPTP1-interacting protein, 39 kDa, putative\tLmjF03.0420\tmRNA\ttaxon:347515\t20110105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0420\tLmjF.03.0420\t\tGO:0020015\tPMID:20551176\tISO\tGeneDB:Tb927.10.3360\tC\tPTP1-interacting protein, 39 kDa, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0520\tLmjF.03.0520\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3500\tC\thypothetical protein, conserved\tLmjF03.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0520\tLmjF.03.0520\t\tGO:0045291\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3500\tP\thypothetical protein, conserved\tLmjF03.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0530\tLmjF.03.0530\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3510\tC\thypothetical 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"TriTrypDB\tLmjF.03.0650\tLmjF.03.0650\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3600\tC\thypothetical protein\tLmjF03.0650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0690\tLmjF.03.0690\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2600\tC\tDEAD/DEAH box helicase, putative\tLmjF03.0690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0740\tLmjF.03.0740\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2650\tC\tcytochrome c oxidase copper chaperone, putative\tLmjF03.0740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0740\tLmjF.03.0740\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2650\tC\tcytochrome c oxidase copper chaperone, putative\tLmjF03.0740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0740\tLmjF.03.0740\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2650\tC\tcytochrome c oxidase copper chaperone, putative\tLmjF03.0740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0750\tLmjF.03.0750\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2660\tC\tTatD related DNase, putative\tLmjF03.0750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0750\tLmjF.03.0750\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2660\tC\tTatD related DNase, putative\tLmjF03.0750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0750\tLmjF.03.0750\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2660\tC\tTatD related DNase, putative\tLmjF03.0750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0770\tLmjF.03.0770\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2680\tC\tUbiquitin-like domain containing protein, putative\tLmjF03.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0770\tLmjF.03.0770\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2680\tC\tUbiquitin-like domain containing protein, putative\tLmjF03.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0790\tLmjF.03.0790\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2700\tC\thypothetical protein, conserved\tLmjF03.0790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0790\tLmjF.03.0790\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2700\tC\thypothetical protein, conserved\tLmjF03.0790\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0840\tLmjF.03.0840\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2750\tC\thypothetical protein, conserved\tLmjF03.0840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0880\tLmjF.03.0880\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2810\tC\thypothetical protein, conserved\tLmjF03.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0900\tLmjF.03.0900\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2830\tC\tpeter pan protein, putative\tLmjF03.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0940\tLmjF.03.0940\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2860\tC\thypothetical protein, conserved\tLmjF03.0940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0960\tLmjF.03.0960\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2880\tC\thypothetical protein, conserved\tLmjF03.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0970\tLmjF.03.0970\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2890\tC\tMORN repeat, putative\tLmjF03.0970\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0980\tEIF2A\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2900\tC\teukaryotic translation initiation factor 2 subunit alpha\tLmjF03.0980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0980\tEIF2A\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2900\tC\teukaryotic translation initiation factor 2 subunit alpha\tLmjF03.0980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0980\tEIF2A\t\tGO:0006413\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508153.730\tP\teukaryotic translation initiation factor 2 subunit alpha\tLmjF03.0980\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0980\tEIF2A\t\tGO:0009267\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508153.730\tP\teukaryotic translation initiation factor 2 subunit alpha\tLmjF03.0980\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0980\tEIF2A\tNOT\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2900\tC\teukaryotic translation initiation factor 2 subunit alpha\tLmjF03.0980\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0980\tEIF2A\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2900\tP\teukaryotic translation initiation factor 2 subunit alpha\tLmjF03.0980\tmRNA\ttaxon:347515\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0040\tLmjF.04.0040\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein\tLmjF04.0040\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0045\tLmjF.04.0045\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6910\tC\thypothetical protein, conserved\tLmjF04.0045\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0045\tLmjF.04.0045\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6910\tC\thypothetical protein, conserved\tLmjF04.0045\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0045\tLmjF.04.0045\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6910\tC\thypothetical protein, conserved\tLmjF04.0045\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0050\tLmjF.04.0050\t\tGO:0030863\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6920\tC\thypothetical protein, conserved\tLmjF04.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0060\tLmjF.04.0060\t\tGO:0000287\tGO_REF:0000024\tISO\tGeneDB:LdBPK_040070.1\tF\tDNA topoisomerase type IB small subunit, putative\tLmjF04.0060\tmRNA\ttaxon:347515\t20110706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0060\tLmjF.04.0060\t\tGO:0003917\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6940\tF\tDNA topoisomerase type IB small subunit, putative\tLmjF04.0060\tmRNA\ttaxon:347515\t20090429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0060\tLmjF.04.0060\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:LdBPK_040070.1\tF\tDNA topoisomerase type IB small subunit, putative\tLmjF04.0060\tmRNA\ttaxon:347515\t20110706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0060\tLmjF.04.0060\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6940\tC\tDNA topoisomerase type IB small subunit, putative\tLmjF04.0060\tmRNA\ttaxon:347515\t20090429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0060\tLmjF.04.0060\t\tGO:0006265\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6940\tP\tDNA topoisomerase type IB small subunit, putative\tLmjF04.0060\tmRNA\ttaxon:347515\t20090429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0060\tLmjF.04.0060\t\tGO:0006333\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6940\tP\tDNA topoisomerase type IB small subunit, putative\tLmjF04.0060\tmRNA\ttaxon:347515\t20090429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0120\tLmjF.04.0120\t\tGO:0000175\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.7070\tF\texosome complex exonuclease RRP40, putative\tLmjF04.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0120\tLmjF.04.0120\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.7070\tC\texosome complex exonuclease RRP40, putative\tLmjF04.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0120\tLmjF.04.0120\t\tGO:0006364\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.7070\tP\texosome complex exonuclease RRP40, putative\tLmjF04.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0270\tLmjF.04.0270\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.7170\tC\tMitochondrial 39-S ribosomal protein L47 (MRP-L47), putative\tLmjF04.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0270\tLmjF.04.0270\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.7170\tC\tMitochondrial 39-S ribosomal protein L47 (MRP-L47), putative\tLmjF04.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0270\tLmjF.04.0270\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.7170\tC\tMitochondrial 39-S ribosomal protein L47 (MRP-L47), putative\tLmjF04.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0270\tLmjF.04.0270\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.7170\tC\tMitochondrial 39-S ribosomal protein L47 (MRP-L47), putative\tLmjF04.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0280\tLmjF.04.0280\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.7180\tC\tadenosine monophosphate deaminase, putative\tLmjF04.0280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0290\tLmjF.04.0290\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.7190\tC\tAlcohol dehydrogenase GroES-like domain containing protein, putative\tLmjF04.0290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0290\tLmjF.04.0290\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.7190\tC\tAlcohol dehydrogenase GroES-like domain containing protein, putative\tLmjF04.0290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0330\tLmjF.04.0330\t\tGO:0000964\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.7210\tP\tmitochondrial exoribonuclease DSS-1, putative\tLmjF04.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0330\tLmjF.04.0330\t\tGO:0004532\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.7210\tF\tmitochondrial exoribonuclease DSS-1, putative\tLmjF04.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0420\tLmjF.04.0420\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.7520\tC\tTetratricopeptide repeat, putative\tLmjF04.0420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0460\tASL\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.7550\tC\tadenylosuccinate lyase, putative\tLmjF04.0460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0460\tASL\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.7550\tC\tadenylosuccinate lyase, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0470\tLmjF.04.0470\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.7620\tC\t60S ribosomal protein L11 (L5, L16)\tLmjF04.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0480\tLmjF.04.0480\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.7650\tC\tADP-ribosylation factor, putative\tLmjF04.0480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0480\tLmjF.04.0480\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.7650\tC\tADP-ribosylation factor, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0490\tLmjF.04.0490\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.7670\tC\thypothetical protein, conserved\tLmjF04.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0520\tLmjF.04.0520\t\tGO:0006810\tPMID:19240115\tISS\t\tP\tpalmitoyl acyltransferase 1, putative\tLmjF04.0520\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0520\tLmjF.04.0520\t\tGO:0006897\tPMID:19240115\tISS\t\tP\tpalmitoyl acyltransferase 1, 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0680\tLmjF.04.0680\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8000\tC\tubiquitin-conjugating enzyme E2, putative\tLmjF04.0680\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0680\tLmjF.04.0680\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8000\tC\tubiquitin-conjugating enzyme E2, putative\tLmjF04.0680\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF04.0730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0740\tLmjF.04.0740\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8060\tP\thypothetical protein, conserved\tLmjF04.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0750\tLmjF.04.0750\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8420\tC\t60S ribosomal protein L10, putative\tLmjF04.0750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0760\tLmjF.04.0760\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8130\tC\tnascent polypeptide associated complex subunit- like protein, copy 2\tLmjF04.0760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0770\tLmjF.04.0770\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8130\tC\tnascent polypeptide associated complex subunit- like protein, copy 1\tLmjF04.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0780\tJ11\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8160\tC\theat shock protein, putative\tLmjF04.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0800\tLmjF.04.0800\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8190\tC\thypothetical protein, conserved\tLmjF04.0800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0800\tLmjF.04.0800\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8190\tC\thypothetical protein, conserved\tLmjF04.0800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0810\tLmjF.04.0810\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8200\tC\tPescadillo N-terminus/BRCA1 C Terminus (BRCT) domain containing protein, putative\tLmjF04.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0810\tLmjF.04.0810\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8200\tC\tPescadillo N-terminus/BRCA1 C Terminus (BRCT) domain containing protein, putative\tLmjF04.0810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0850\tLmjF.04.0850\t\tGO:0030150\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8260\tP\tserine peptidase, Clan S-, family S54, putative\tLmjF04.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0850\tLmjF.04.0850\t\tGO:0031966\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8260\tC\tserine peptidase, Clan S-, family S54, putative\tLmjF04.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0860\tLmjF.04.0860\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8290\tC\thypothetical protein, conserved\tLmjF04.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0940\tJ27\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8410\tC\tchaperone protein DnaJ, putative\tJ8|LmjF04.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0950\tLmjF.04.0950\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8420\tC\t60S ribosomal protein L10, putative\tLmjF04.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0960\tADKG\t\tGO:0004017\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8450\tF\tadenylate kinase, putative\tLmjF04.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0960\tADKG\t\tGO:0004127\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8450\tF\tadenylate kinase, putative\tLmjF04.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0960\tADKG\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8450\tF\tadenylate kinase, putative\tLmjF04.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0960\tADKG\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8450\tC\tadenylate kinase, putative\tLmjF04.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0960\tADKG\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8450\tC\tadenylate kinase, putative\tLmjF04.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0960\tADKG\t\tGO:0009041\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8450\tF\tadenylate kinase, putative\tLmjF04.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0960\tADKG\t\tGO:0015949\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8450\tP\tadenylate kinase, putative\tLmjF04.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0960\tADKG\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8450\tC\tadenylate kinase, putative\tLmjF04.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0970\tLmjF.04.0970\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8490\tC\thypothetical protein, conserved\tLmjF04.0970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1010\tLmjF.04.1010\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8550\tC\tDomain of unknown function (DUF947), putative\tLmjF04.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1030\tLmjF.04.1030\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8570\tC\tCOPI associated protein, putative\tLmjF04.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1080\tLmjF.04.1080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8610\tC\tTranscriptional repressor TCF25, putative\tLmjF04.1080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1130\tLmjF.04.1130\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8680\tC\tcytochrome c oxidase assembly factor, putative\tLmjF04.1130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1160\tFBP\t\tGO:0006094\tPMID:16569701\tIMP\t\tP\tfructose-1,6-bisphosphatase\tLmjF04.1160\tmRNA\ttaxon:347515\t20091208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1160\tFBP\t\tGO:0020015\tPMID:16569701\tIDA\t\tC\tfructose-1,6-bisphosphatase\tLmjF04.1160\tmRNA\ttaxon:347515\t20091208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1160\tFBP\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8720\tC\tfructose-1,6-bisphosphatase\tLmjF04.1160\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1160\tFBP\t\tGO:0042132\tPMID:16569701\tIDA\t\tF\tfructose-1,6-bisphosphatase\tLmjF04.1160\tmRNA\ttaxon:347515\t20141114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1170\tDRBD3\t\tGO:0003723\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8740\tF\tDouble RNA binding domain protein 3\tLmjF04.1170|PTB1\tmRNA\ttaxon:347515\t20130822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1170\tDRBD3\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8740\tF\tDouble RNA binding domain protein 3\tLmjF04.1170|PTB1\tmRNA\ttaxon:347515\t20160727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1170\tDRBD3\t\tGO:0003730\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8740\tF\tDouble RNA binding domain protein 3\tLmjF04.1170|PTB1\tmRNA\ttaxon:347515\t20130822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1170\tDRBD3\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8740\tC\tDouble RNA binding domain protein 3\tLmjF04.1170|PTB1\tmRNA\ttaxon:347515\t20130822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1170\tDRBD3\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8740\tC\tDouble RNA binding domain protein 3\tLmjF04.1170|PTB1\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1170\tDRBD3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8740\tC\tDouble RNA binding domain protein 3\tLmjF04.1170|PTB1\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1170\tDRBD3\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8740\tC\tDouble RNA binding domain protein 3\tLmjF04.1170|PTB1\tmRNA\ttaxon:347515\t20130822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1170\tDRBD3\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8740\tP\tDouble RNA binding domain protein 3\tLmjF04.1170|PTB1\tmRNA\ttaxon:347515\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1170\tDRBD3\t\tGO:0030529\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8740\tC\tDouble RNA binding domain protein 3\tLmjF04.1170|PTB1\tmRNA\ttaxon:347515\t20130822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1170\tDRBD3\t\tGO:0048255\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8740\tP\tDouble RNA binding domain protein 3\tLmjF04.1170|PTB1\tmRNA\ttaxon:347515\t20130822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1180\tLmjF.04.1180\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8760\tC\thypothetical protein, conserved\tLmjF04.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1180\tLmjF.04.1180\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8760\tC\thypothetical protein, conserved\tLmjF04.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1190\tLmjF.04.1190\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8780\tC\ttRNA nucleotidyltransferase, putative\tLmjF04.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1210\tCK1.3\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tcasein kinase I, putative\tLmjF04.1210\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1210\tCK1.3\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tcasein kinase I, putative\tLmjF04.1210\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1210\tCK1.3\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tcasein kinase I, putative\tLmjF04.1210\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1220\tLmjF.04.1220\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8820\tC\thypothetical protein, conserved\tLmjF04.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1230\tACT\t\tGO:0003677\tPMID:20147461\tISO\tGeneDB:LinJ04_V3.1250GeneDB:LinJ04_V3.1250\tF\tactin\tLmjF04.1230\tmRNA\ttaxon:347515\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1230\tACT\t\tGO:0004519\tPMID:20147461\tISO\tGeneDB:LinJ.04.1250\tF\tactin\tLmjF04.1230\tmRNA\ttaxon:347515\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1230\tACT\t\tGO:0006338\tPMID:20147461\tIDA\t\tP\tactin\tLmjF04.1230\tmRNA\ttaxon:347515\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1230\tACT\t\tGO:0020023\tPMID:20147461\tISO\tGeneDB:LinJ.04.1250\tC\tactin\tLmjF04.1230\tmRNA\ttaxon:347515\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0010\tLmjF.05.0010\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4520\tC\thypothetical protein, conserved\tLmjF05.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0010\tLmjF.05.0010\t\tGO:0000922\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4520\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0050\tLmjF.05.0050\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4470\tC\thypothetical protein, conserved\tLmjF05.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0060\tLmjF.05.0060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4460\tC\tmajor vault protein, putative\tLmjF05.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0070\tLmjF.05.0070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4440\tC\tdynein light chain, putative\tLmjF05.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0070\tLmjF.05.0070\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4440\tC\tdynein light chain, putative\tLmjF05.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0090\tNudix2\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4350\tC\tNudix hydrolase 2, putative\tLmjF05.0090\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0090\tNudix2\tNOT\tGO:0031087\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4350\tP\tNudix hydrolase 2, putative\tLmjF05.0090\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0090\tNudix2\tNOT\tGO:0050072\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4350\tF\tNudix hydrolase 2, putative\tLmjF05.0090\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0100\tLmjF.05.0100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4380\tC\tkinetoplastid-specific phospho-protein phosphatase, 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0120\tLmjF.05.0120\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4360\tC\thypothetical protein, conserved\tLmjF05.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0140\tLmjF.05.0140\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4420\tF\tnucleolar RNA helicase II, putative\tLmjF05.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0140\tLmjF.05.0140\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4420\tC\tnucleolar RNA helicase II, putative\tLmjF05.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0140\tLmjF.05.0140\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4420\tC\tnucleolar RNA helicase II, putative\tLmjF05.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0140\tLmjF.05.0140\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4420\tC\tnucleolar RNA helicase II, putative\tLmjF05.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0150\tLmjF.05.0150\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4400\tC\thypothetical protein, conserved\tLmjF05.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0150\tLmjF.05.0150\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4400\tC\thypothetical protein, conserved\tLmjF05.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0170\tLmjF.05.0170\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4340\tC\tbasal body component, putative\tLmjF05.0170\tmRNA\ttaxon:347515\t20151209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0180\tLmjF.05.0180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4330\tC\tdihydrolipoamide branched chain transacylase, putative\tLmjF05.0180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0180\tLmjF.05.0180\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4330\tP\tdihydrolipoamide branched chain transacylase, putative\tLmjF05.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0190\tLmjF.05.0190\t\tGO:0000365\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4320\tP\tFip1 motif/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF05.0190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0190\tLmjF.05.0190\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tFip1 motif/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF05.0190\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0190\tLmjF.05.0190\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4320\tC\tFip1 motif/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF05.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0190\tLmjF.05.0190\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4320\tP\tFip1 motif/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF05.0190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0200\tLmjF.05.0200\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4310\tC\t50S ribosome-binding GTPase, putative\tLmjF05.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0210\tLmjF.05.0210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10680\tC\thypothetical protein, conserved\tLmjF05.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0230\tLmjF.05.0230\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10650\tC\thydrogenase, 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0280\tLmjF.05.0280\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10610\tC\tprotein tyrosine phosphatase, putative\tLmjF05.0280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0290\tLmjF.05.0290\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10440\tC\tphosphate carrier protein, mitochondrial precursor-like protein\tLmjF05.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0310\tLmjF.05.0310\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10420\tC\tmonothiol glutaredoxin, putative\tLmjF05.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0310\tLmjF.05.0310\t\tGO:0045454\tPMID:18669638\tIDA\t\tP\tmonothiol glutaredoxin, putative\tLmjF05.0310\tmRNA\ttaxon:347515\t20110620\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0310\tLmjF.05.0310\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tmonothiol glutaredoxin, putative\tLmjF05.0310\tmRNA\ttaxon:347515\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0310\tLmjF.05.0310\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10420\tC\tmonothiol glutaredoxin, putative\tLmjF05.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0330\tLmjF.05.0330\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10410\tC\tDNA replication licensing factor MCM8, putative\tLmjF05.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0330\tLmjF.05.0330\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10410\tC\tDNA replication licensing factor MCM8, putative\tLmjF05.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0330\tLmjF.05.0330\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10410\tC\tDNA replication licensing factor MCM8, putative\tLmjF05.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0330\tLmjF.05.0330\t\tGO:0042555\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10410\tC\tDNA replication licensing factor 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0350\tTRYR\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10390\tC\ttrypanothione reductase\tLmjF05.0350\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0350\tTRYR\t\tGO:0015042\tPMID:7935607|PMID:19497128\tIDA\t\tF\ttrypanothione reductase\tLmjF05.0350\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0350\tTRYR\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10390\tC\ttrypanothione 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"rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0360\tLmjF.05.0360\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10380\tC\tATP-dependent RNA helicase, putative\tLmjF05.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0360\tLmjF.05.0360\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10380\tC\tATP-dependent RNA helicase, putative\tLmjF05.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0380\tLmjF.05.0380\t\tGO:0030863\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10360\tC\tmicrotubule-associated protein, putative\tLmjF05.0380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0380\tLmjF.05.0380\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10360\tC\tmicrotubule-associated protein, putative\tLmjF05.0380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0390\tLmjF.05.0390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10350\tC\tSTE/STE11 serine/threonine-protein kinase, putative\tLmjF05.0390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0400\tLmjF.05.0400\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10340\tC\tstructural maintenance of chromosome (SMC), putative\tLmjF05.0400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0400\tLmjF.05.0400\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10340\tC\tstructural maintenance of chromosome (SMC), putative\tLmjF05.0400\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0400\tLmjF.05.0400\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10340\tC\tstructural maintenance of chromosome (SMC), putative\tLmjF05.0400\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0410\tLmjF.05.0410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10330\tC\tTPR repeat, putative\tLmjF05.0410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0410\tLmjF.05.0410\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10330\tC\tTPR repeat, putative\tLmjF05.0410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0440\tLmjF.05.0440\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10300\tC\thypothetical protein, conserved\tLmjF05.0440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0450\tLmjF.05.0450\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7460\tF\thypothetical protein, conserved\tLmjF05.0450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0460\tLmjF.05.0460\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7450\tC\tGTPase, putative\tLmjF05.0460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0460\tLmjF.05.0460\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7450\tC\tGTPase, putative\tLmjF05.0460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0500\tATPF1A\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7420\tC\tATP synthase F1, alpha subunit, putative\tLmjF05.0500\tmRNA\ttaxon:347515\t20150713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0510\tATPF1A\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7420\tC\tATP synthase F1, alpha subunit, putative\tLmjF05.0510\tmRNA\ttaxon:347515\t20150713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0520\tLmjF.05.0520\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7410\tC\tnuclear receptor binding factor-like protein\tLmjF05.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0540\tLSM3\t\tGO:0005688\tPMID:20592024\tIDA\t\tC\tu6 snrna-associated sm-like protein lsm3\tLmjF05.0540\tmRNA\ttaxon:347515\t20160111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0540\tLSM3\t\tGO:0017070\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7380\tF\tu6 snrna-associated sm-like protein lsm3\tLmjF05.0540\tmRNA\ttaxon:347515\t20160111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0540\tLSM3\t\tGO:0045291\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7380\tP\tu6 snrna-associated sm-like protein lsm3\tLmjF05.0540\tmRNA\ttaxon:347515\t20160111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0570\tLmjF.05.0570\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7330\tC\thypothetical protein, conserved\tLmjF05.0570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0570\tLmjF.05.0570\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7330\tC\thypothetical protein, conserved\tLmjF05.0570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0600\tLmjF.05.0600\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7290\tC\tCOG4 transport protein, putative\tLmjF05.0600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0600\tLmjF.05.0600\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7290\tC\tCOG4 transport protein, putative\tLmjF05.0600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0600\tLmjF.05.0600\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7290\tC\tCOG4 transport protein, putative\tLmjF05.0600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0610\tLmjF.05.0610\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7280\tC\tSurp module, putative\tLmjF05.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0630\tLmjF.05.0630\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7260\tC\tkinesin, putative\tLmjF05.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0630\tLmjF.05.0630\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7260\tC\tkinesin, putative\tLmjF05.0630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0630\tLmjF.05.0630\t\tGO:0048870\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7260\tP\tkinesin, putative\tLmjF05.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0630\tLmjF.05.0630\t\tGO:0097542\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7260\tC\tkinesin, putative\tLmjF05.0630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0640\tLmjF.05.0640\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7250\tC\tAnkyrin repeats (many copies)/Ankyrin repeats (3 copies), putative\tLmjF05.0640\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0660\tLmjF.05.0660\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7230\tC\tnitroreductase-like protein\tLmjF05.0660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0660\tLmjF.05.0660\t\tGO:0017144\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7230\tP\tnitroreductase-like protein\tLmjF05.0660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0660\tLmjF.05.0660\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7230\tP\tnitroreductase-like protein\tLmjF05.0660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0690\tLmjF.05.0690\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7200\tC\thypothetical protein, conserved\tLmjF05.0690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0740\tLmjF.05.0740\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7140\tP\tVta1 like, putative\tLmjF05.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0750\tLmjF.05.0750\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7130\tC\tFlavodoxin/Radical SAM superfamily/Wyosine base formation, putative\tLmjF05.0750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0800\tLmjF.05.0800\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7070\tC\tMYND zinc finger (ZnF) domain-like protein\tLmjF05.0800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0800\tLmjF.05.0800\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7070\tC\tMYND zinc finger (ZnF) domain-like protein\tLmjF05.0800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0830\tLmjF.05.0830\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7040\tC\tmethylthioadenosine phosphorylase, putative\tLmjF05.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0830\tLmjF.05.0830\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7040\tC\tmethylthioadenosine phosphorylase, putative\tLmjF05.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0830\tLmjF.05.0830\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7040\tC\tmethylthioadenosine phosphorylase, putative\tLmjF05.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0830\tLmjF.05.0830\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7040\tC\tmethylthioadenosine phosphorylase, putative\tLmjF05.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0850\tLmjF.05.0850\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7030\tC\tzinc-finger of a C2HC-type, putative\tLmjF05.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0850\tLmjF.05.0850\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7030\tC\tzinc-finger of a C2HC-type, putative\tLmjF05.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0850\tLmjF.05.0850\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7030\tC\tzinc-finger of a C2HC-type, putative\tLmjF05.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0850\tLmjF.05.0850\t\tGO:0097542\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.7030\tC\tzinc-finger of a C2HC-type, putative\tLmjF05.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0860\tLmjF.05.0860\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7010\tC\thypothetical protein, conserved\tLmjF05.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0880\tLmjF.05.0880\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6990\tC\thypothetical protein, conserved\tLmjF05.0880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0890\tLmjF.05.0890\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6980\tC\tCPSF A subunit region, putative\tLmjF05.0890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0890\tLmjF.05.0890\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6980\tC\tCPSF A subunit region, putative\tLmjF05.0890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0920\tLmjF.05.0920\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6970\tC\tparaflagellar rod protein, putative\tLmjF05.0920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0970\tMST\t\tGO:0005829\tPMID:12419809\tIDA\t\tC\t3-mercaptopyruvate sulfurtransferase\tLmjF05.0970\tmRNA\ttaxon:347515\t20091009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0970\tMST\t\tGO:0016784\tPMID:12419809|PMID:19497128\tIDA\t\tF\t3-mercaptopyruvate sulfurtransferase\tLmjF05.0970\tmRNA\ttaxon:347515\t20091009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0970\tMST\t\tGO:0019343\tPMID:12419809\tIDA\t\tP\t3-mercaptopyruvate sulfurtransferase\tLmjF05.0970\tmRNA\ttaxon:347515\t20091009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0970\tMST\t\tGO:0019499\tPMID:12419809\tIDA\t\tP\t3-mercaptopyruvate sulfurtransferase\tLmjF05.0970\tmRNA\ttaxon:347515\t20091009\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0980\tLmjF.05.0980\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.450\tC\tNADH-ubiquinone oxidoreductase, mitochondrial, putative\tLmjF05.0980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0980\tLmjF.05.0980\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.450\tC\tNADH-ubiquinone oxidoreductase, mitochondrial, putative\tLmjF05.0980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1020\tLmjF.05.1020\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.500\tC\thypothetical protein, conserved\tLmjF05.1020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1020\tLmjF.05.1020\t\tGO:0005739\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.500\tC\thypothetical protein, conserved\tLmjF05.1020\tmRNA\ttaxon:347515\t20120601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1020\tLmjF.05.1020\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.500\tC\thypothetical protein, conserved\tLmjF05.1020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1040\tLmjF.05.1040\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.520\tC\tstomatin-like protein\tLmjF05.1040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1070\tLmjF.05.1070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6920\tC\tLegume-like lectin family, putative\tLmjF05.1070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1090\tLmjF.05.1090\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6900\tC\tdouble-strand-break repair protein rad21 homolog, putative\tLmjF05.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1090\tLmjF.05.1090\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6900\tC\tdouble-strand-break repair protein rad21 homolog, putative\tLmjF05.1090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1090\tLmjF.05.1090\t\tGO:0007076\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6900\tP\tdouble-strand-break repair protein rad21 homolog, putative\tLmjF05.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1090\tLmjF.05.1090\t\tGO:0051301\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6900\tP\tdouble-strand-break repair protein rad21 homolog, putative\tLmjF05.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1100\tLmjF.05.1100\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6890\tC\tmethyltransferase domain containing protein, putative\tLmjF05.1100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1100\tLmjF.05.1100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6890\tC\tmethyltransferase domain containing protein, putative\tLmjF05.1100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1100\tLmjF.05.1100\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6890\tC\tmethyltransferase domain containing protein, putative\tLmjF05.1100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1130\tLmjF.05.1130\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.530\tC\thypothetical protein, conserved\tLmjF05.1130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1140\tVAd\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.550\tC\tV-type proton ATPase subunit D, putative\tLmjF05.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1140\tVAd\t\tGO:0005764\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.550\tC\tV-type proton ATPase subunit D, putative\tLmjF05.1140\tmRNA\ttaxon:347515\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1140\tVAd\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.550\tC\tV-type proton ATPase subunit D, putative\tLmjF05.1140\tmRNA\ttaxon:347515\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1140\tVAd\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.550\tC\tV-type proton ATPase subunit D, putative\tLmjF05.1140\tmRNA\ttaxon:347515\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1140\tVAd\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.550\tP\tV-type proton ATPase subunit D, putative\tLmjF05.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1170\tLmjF.05.1170\t\tGO:0009922\tPMID:20382188\tISO\tGeneDB:Tb927.5.4530\tF\tfatty acid elongase, putative\tLmjF05.1170\tmRNA\ttaxon:347515\t20100726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1170\tLmjF.05.1170\t\tGO:0030176\tGO_REF:0000002\tEXP\t\tC\tfatty acid elongase, putative\tLmjF05.1170\tmRNA\ttaxon:347515\t20090726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1170\tLmjF.05.1170\t\tGO:0042759\tPMID:20382188\tISO\tGeneDB:Tb927.5.4530\tP\tfatty acid elongase, putative\tLmjF05.1170\tmRNA\ttaxon:347515\t20100726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1190\tBOH2\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.570\tC\tBait on Hook 2, putative\tLmjF05.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1210\tLmjF.05.1210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.590\tC\tprotein phosphatase type 1 regulator-like protein\tLmjF05.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1210\tLmjF.05.1210\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.590\tC\tprotein phosphatase type 1 regulator-like protein\tLmjF05.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1210\tLmjF.05.1210\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.590\tC\tprotein phosphatase type 1 regulator-like protein\tLmjF05.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0030\tLmjF.06.0030\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4700\tC\tWD domain, G-beta repeat, putative\tLmjF06.0030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0040\tLmjF.06.0040\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4710\tC\t39S mitochondrial ribosomal protein L46, putative\tLmjF06.0040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0040\tLmjF.06.0040\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4710\tC\t39S mitochondrial ribosomal protein L46, putative\tLmjF06.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0050\tPUF5\t\tGO:0003723\tPMID:17052765\tTAS\t\tF\tpumilio/PUF RNA binding protein 5, putative\tLmjF06.0050\tmRNA\ttaxon:347515\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0050\tPUF5\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4730\tC\tpumilio/PUF RNA binding protein 5, putative\tLmjF06.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0050\tPUF5\t\tGO:0005739\tPMID:17052765|GO_REF:0000024\tISO\tGeneDB:Tb927.7.4730\tC\tpumilio/PUF RNA binding protein 5, putative\tLmjF06.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0050\tPUF5\t\tGO:0006417\tPMID:17052765\tISO\tGeneDB:Tb927.7.4730\tP\tpumilio/PUF RNA binding protein 5, putative\tLmjF06.0050\tmRNA\ttaxon:347515\t20110601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0050\tPUF5\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4730\tP\tpumilio/PUF RNA binding protein 5, putative\tLmjF06.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0050\tPUF5\t\tGO:0043488\tPMID:17052765\tISO\tGeneDB:Tb927.7.4730\tP\tpumilio/PUF RNA binding protein 5, putative\tLmjF06.0050\tmRNA\ttaxon:347515\t20110601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0070\tLmjF.06.0070\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4750\tP\thypothetical protein, conserved\tLmjF06.0070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0080\tABCG1\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tATP-binding cassette protein subfamily G, member 1, putative\tLmjF06.0080\tmRNA\ttaxon:347515\t20090608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0090\tABCG2\t\tGO:0005886\tPMID:27021316\tIDA\t\tC\tATP-binding cassette protein subfamily G, member 2\tLmjF06.0090\tmRNA\ttaxon:347515\t20160711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0090\tABCG2\t\tGO:0020016\tPMID:23638200\tIDA\t\tC\tATP-binding cassette protein subfamily G, member 2\tLmjF06.0090\tmRNA\ttaxon:347515\t20160711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0090\tABCG2\t\tGO:0030139\tPMID:23638200\tIDA\t\tC\tATP-binding cassette protein subfamily G, member 2\tLmjF06.0090\tmRNA\ttaxon:347515\t20160711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0090\tABCG2\t\tGO:0035690\tPMID:27021316\tIMP\t\tP\tATP-binding cassette protein subfamily G, member 2\tLmjF06.0090\tmRNA\ttaxon:347515\t20160711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0090\tABCG2\t\tGO:0090556\tPMID:23638200\tIMP\t\tF\tATP-binding cassette protein subfamily G, member 2\tLmjF06.0090\tmRNA\ttaxon:347515\t20160125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0100\tABCG3\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tATP-binding cassette protein subfamily G, member 3, putative\tLmjF06.0100\tmRNA\ttaxon:347515\t20090608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0110\tLmjF.06.0110\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4760\tC\thypothetical protein, conserved\tLmjF06.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0110\tLmjF.06.0110\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4760\tC\thypothetical protein, conserved\tLmjF06.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0110\tLmjF.06.0110\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4760\tC\thypothetical protein, conserved\tLmjF06.0110\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0110\tLmjF.06.0110\t\tGO:0031965\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4760\tC\thypothetical protein, conserved\tLmjF06.0110\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0120\tCYP2\t\tGO:0016018\tPMID:19923714\tIDA\t\tF\tcyclophilin 2\tLmjF06.0120\tmRNA\ttaxon:347515\t20091204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0120\tCYP2\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4770\tC\tcyclophilin 2\tLmjF06.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0140\tLmjF.06.0140\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4790\tC\t20S proteasome beta 6 subunit, putative\tLmjF06.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0140\tLmjF.06.0140\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4790\tC\t20S proteasome beta 6 subunit, putative\tLmjF06.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0140\tLmjF.06.0140\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4790\tC\t20S proteasome beta 6 subunit, putative\tLmjF06.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0160\tLmjF.06.0160\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4810\tC\tHD domain containing protein, putative\tLmjF06.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0170\tLmjF.06.0170\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4820\tC\tTrm112p-like protein, putative\tLmjF06.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0170\tLmjF.06.0170\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4820\tC\tTrm112p-like protein, putative\tLmjF06.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0170\tLmjF.06.0170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4820\tC\tTrm112p-like protein, putative\tLmjF06.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0180\tLmjF.06.0180\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4830\tC\tkinesin-like protein\tLmjF06.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0180\tLmjF.06.0180\t\tGO:0005871\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4830\tC\tkinesin-like protein\tLmjF06.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0180\tLmjF.06.0180\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4830\tC\tkinesin-like protein\tLmjF06.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0210\tLmjF.06.0210\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4860\tC\tFHA domain containing protein, putative\tLmjF06.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0210\tLmjF.06.0210\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4860\tC\tFHA domain containing protein, putative\tLmjF06.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0210\tLmjF.06.0210\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4860\tP\tFHA domain containing protein, putative\tLmjF06.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0220\tLmjF.06.0220\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4870\tC\thypothetical protein, conserved\tLmjF06.0220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0240\tPOMP34\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4890\tC\tPresent in the outer mitochondrial membrane proteome 34\tLmjF06.0240\tmRNA\ttaxon:347515\t20150928\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0260\tXRNA\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4900\tF\t5'-3' exoribonuclease A, putative\tLmjF06.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0260\tXRNA\t\tGO:0004534\tGO_REF:0000024\tISS\tUniProtKB:XRN1_YEAST\tF\t5'-3' exoribonuclease A, putative\tLmjF06.0260\tmRNA\ttaxon:347515\t20150318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0260\tXRNA\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4900\tC\t5'-3' exoribonuclease A, putative\tLmjF06.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0260\tXRNA\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4900\tC\t5'-3' exoribonuclease A, putative\tLmjF06.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0260\tXRNA\t\tGO:0006402\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4900\tP\t5'-3' exoribonuclease A, putative\tLmjF06.0260\tmRNA\ttaxon:347515\t20150318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0260\tXRNA\t\tGO:0051286\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4900\tC\t5'-3' exoribonuclease A, putative\tLmjF06.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0270\tLmjF.06.0270\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4910\tC\thypothetical protein, conserved\tLmjF06.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0280\tLmjF.06.0280\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4920\tC\thypothetical protein, conserved\tLmjF06.0280\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0340\tLmjF.06.0340\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4940\tC\tserine peptidase, clan SC, family S9A-like protein\tLmjF06.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0360\tLmjF.06.0360\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4960\tC\thypothetical protein, conserved\tLmjF06.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0380\tPOMP35\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4980\tC\tPresent in the outer mitochondrial membrane proteome 35\tLmjF06.0380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0380\tPOMP35\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4980\tC\tPresent in the outer mitochondrial membrane proteome 35\tLmjF06.0380\tmRNA\ttaxon:347515\t20150928\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0410\tLmjF.06.0410\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5000\tC\t60S ribosomal protein L19, putative\tLmjF06.0410\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0410\tLmjF.06.0410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5020|GeneDB:Tb927.7.5000\tC\t60S ribosomal protein L19, putative\tLmjF06.0410\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0415\tLmjF.06.0415\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5000\tC\t60S ribosomal protein L19, putative\tLmjF06.0415\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0415\tLmjF.06.0415\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5020|GeneDB:Tb927.7.5000\tC\t60S ribosomal protein L19, putative\tLmjF06.0415\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0430\tLmjF.06.0430\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5040\tP\thypothetical protein, conserved\tLmjF06.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0430\tLmjF.06.0430\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5040\tC\thypothetical protein, conserved\tLmjF06.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0430\tLmjF.06.0430\t\tGO:0005819\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5040\tC\thypothetical protein, conserved\tLmjF06.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0430\tLmjF.06.0430\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5040\tP\thypothetical protein, conserved\tLmjF06.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0430\tLmjF.06.0430\t\tGO:0032133\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5040\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0470\tLmjF.06.0470\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5090\tC\tcondensin complex subunit 2, putative\tLmjF06.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0470\tLmjF.06.0470\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5090\tC\tcondensin complex subunit 2, putative\tLmjF06.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0470\tLmjF.06.0470\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5090\tC\tcondensin complex subunit 2, putative\tLmjF06.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0560\tDUT\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5160\tC\tdeoxyuridine triphosphatase, putative\tLmjF06.0560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0570\tLmjF.06.0570\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5170\tC\t60S ribosomal protein L23a, putative\tLmjF06.0570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0570\tLmjF.06.0570\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5180\tC\t60S ribosomal protein L23a, putative\tLmjF06.0570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0580\tLmjF.06.0580\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5170\tC\t60S ribosomal protein L23a, putative\tLmjF06.0580\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0580\tLmjF.06.0580\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5180\tC\t60S ribosomal protein L23a, putative\tLmjF06.0580\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0650\tLmjF.06.0650\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5230\tC\tlanosterol synthase, putative\tLmjF06.0650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0650\tLmjF.06.0650\t\tGO:0016126\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5230\tP\tlanosterol synthase, putative\tLmjF06.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0690\tLmjF.06.0690\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5280\tC\thypothetical protein, conserved\tLmjF06.0690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0730\tLmjF.06.0730\t\tGO:0003941\tPMID:19497128\tRCA\t\tF\tserine-threonine dehydratase, putative\tLmjF06.0730\tmRNA\ttaxon:347515\t20100817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0730\tLmjF.06.0730\t\tGO:0004794\tPMID:19497128\tRCA\t\tF\tserine-threonine dehydratase, putative\tLmjF06.0730\tmRNA\ttaxon:347515\t20100817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0730\tLmjF.06.0730\t\tGO:0006565\tPMID:19497128\tRCA\t\tP\tserine-threonine dehydratase, putative\tLmjF06.0730\tmRNA\ttaxon:347515\t20100817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0730\tLmjF.06.0730\t\tGO:0006567\tPMID:19497128\tRCA\t\tP\tserine-threonine dehydratase, putative\tLmjF06.0730\tmRNA\ttaxon:347515\t20100817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0770\tDRBD12\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5380\tP\tDouble RNA binding domain protein 12\tLmjF06.0770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0830\tLmjF.06.0830\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5450\tC\tlipin, putative\tLmjF06.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0840\tLmjF.06.0840\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5460\tC\thypothetical protein, conserved\tLmjF06.0840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0860\tDHFR-TS\t\tGO:0004146\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5480\tF\tdihydrofolate reductase-thymidylate synthase\tLmjF06.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0860\tDHFR-TS\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5480\tC\tdihydrofolate reductase-thymidylate synthase\tLmjF06.0860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0860\tDHFR-TS\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5480\tC\tdihydrofolate reductase-thymidylate synthase\tLmjF06.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0860\tDHFR-TS\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5480\tP\tdihydrofolate reductase-thymidylate synthase\tLmjF06.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0860\tDHFR-TS\t\tGO:0046105\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5480\tP\tdihydrofolate reductase-thymidylate synthase\tLmjF06.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0870\tPRMT7\t\tGO:0005515\tPMID:25294169\tIPI\tGeneDB:LmjF.34.2580|GeneDB:LmjF.32.0400\tF\targinine N-methyltransferase, type III, putative\tLmjF06.0870\tmRNA\ttaxon:347515\t20160125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0870\tPRMT7\t\tGO:0005737\tPMID:25294169\tIDA\t\tC\targinine N-methyltransferase, type III, putative\tLmjF06.0870\tmRNA\ttaxon:347515\t20160125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0870\tPRMT7\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5490\tC\targinine N-methyltransferase, type III, putative\tLmjF06.0870\tmRNA\ttaxon:347515\t20100521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0870\tPRMT7\t\tGO:0016273\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5490\tF\targinine N-methyltransferase, type III, putative\tLmjF06.0870\tmRNA\ttaxon:347515\t20100521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0870\tPRMT7\t\tGO:0016274\tPMID:25294169\tIMP\t\tF\targinine N-methyltransferase, type III, putative\tLmjF06.0870\tmRNA\ttaxon:347515\t20160125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0870\tPRMT7\t\tGO:0018216\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5490\tP\targinine N-methyltransferase, type III, putative\tLmjF06.0870\tmRNA\ttaxon:347515\t20100521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0870\tPRMT7\t\tGO:0034969\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5490\tP\targinine N-methyltransferase, type III, putative\tLmjF06.0870\tmRNA\ttaxon:347515\t20100521\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0870\tPRMT7\t\tGO:0035246\tPMID:25294169\tIMP\t\tP\targinine N-methyltransferase, type III, putative\tLmjF06.0870\tmRNA\ttaxon:347515\t20160125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0910\tLmjF.06.0910\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5520\tC\tpeptidyl-tRNA hydrolase, putative\tLmjF06.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0930\tLmjF.06.0930\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5540\tC\t2,4-dienoyl-coa reductase-like protein\tLmjF06.0930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0950\tLmjF.06.0950\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5560\tC\tglucosamine-fructose-6-phosphate aminotransferase, putative\tLmjF06.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0950\tLmjF.06.0950\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5560\tP\tglucosamine-fructose-6-phosphate aminotransferase, putative\tLmjF06.0950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0950\tLmjF.06.0950\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5560\tC\tglucosamine-fructose-6-phosphate aminotransferase, putative\tLmjF06.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0970\tLmjF.06.0970\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5590\tC\tDomain of unknown function (DUF3883), putative\tLmjF06.0970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0980\tLmjF.06.0980\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5600\tC\tLeucine Rich Repeat, putative\tLmjF06.0980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1010\tLmjF.06.1010\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5630\tC\thypothetical protein, conserved\tLmjF06.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1020\tLmjF.06.1020\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5640\tC\tG-patch domain containing protein, putative\tLmjF06.1020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1030\tLmjF.06.1030\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5650\tC\tkinesin, putative\tLmjF06.1030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1030\tLmjF.06.1030\t\tGO:0005871\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5650\tC\tkinesin, putative\tLmjF06.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1030\tLmjF.06.1030\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5650\tC\tkinesin, putative\tLmjF06.1030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1040\tLmjF.06.1040\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5660\tC\thypothetical protein, conserved\tLmjF06.1040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1050\tPDI-1\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5790\tC\tprotein disulfide isomerase\tLmjF06.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1070\tLmjF.06.1070\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5680\tP\tdeoxyribose-phosphate aldolase, putative\tLmjF06.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1070\tLmjF.06.1070\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5680\tC\tdeoxyribose-phosphate aldolase, putative\tLmjF06.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1100\tpATOM36\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5700\tC\tperipherally associated ATOM36\tLmjF06.1100\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1100\tpATOM36\tNOT\tGO:0005742\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5700\tC\tperipherally associated ATOM36\tLmjF06.1100\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1100\tpATOM36\t\tGO:0030150\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5700\tP\tperipherally associated ATOM36\tLmjF06.1100\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1100\tpATOM36\t\tGO:0033955\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5700\tP\tperipherally associated ATOM36\tLmjF06.1100\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1100\tpATOM36\t\tGO:0070096\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5700\tP\tperipherally associated ATOM36\tLmjF06.1100\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1150\tLmjF.06.1150\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5740\tC\tDomain of unknown function (DUF4379), putative\tLmjF06.1150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1150\tLmjF.06.1150\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5740\tC\tDomain of unknown function (DUF4379), putative\tLmjF06.1150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1160\tLmjF.06.1160\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5750\tC\thypothetical protein, conserved\tLmjF06.1160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1160\tLmjF.06.1160\t\tGO:0007049\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5750\tP\thypothetical protein, conserved\tLmjF06.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1170\tMTR2\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5760\tC\tnuclear transport factor 2 protein, putative\tLmjF06.1170|NTF2\tmRNA\ttaxon:347515\t20150422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1170\tMTR2\t\tGO:0006406\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5760\tP\tnuclear transport factor 2 protein, putative\tLmjF06.1170|NTF2\tmRNA\ttaxon:347515\t20150422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1180\tPK53\t\tGO:0000281\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5770\tP\tNuclear Dbf2-related kinase\tLmjF06.1180\tmRNA\ttaxon:347515\t20100330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1180\tPK53\t\tGO:0004672\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5770\tF\tNuclear Dbf2-related kinase\tLmjF06.1180\tmRNA\ttaxon:347515\t20140528\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1180\tPK53\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5770\tC\tNuclear Dbf2-related kinase\tLmjF06.1180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1180\tPK53\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5770\tC\tNuclear Dbf2-related kinase\tLmjF06.1180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1180\tPK53\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5770\tC\tNuclear Dbf2-related kinase\tLmjF06.1180\tmRNA\ttaxon:347515\t20100616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1180\tPK53\t\tGO:0008283\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5770\tP\tNuclear Dbf2-related kinase\tLmjF06.1180\tmRNA\ttaxon:347515\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1180\tPK53\t\tGO:0051726\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5770\tP\tNuclear Dbf2-related kinase\tLmjF06.1180\tmRNA\ttaxon:347515\t20100616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1180\tPK53\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5770\tC\tNuclear Dbf2-related kinase\tLmjF06.1180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1190\tLmjF.06.1190\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.5780\tC\tthioredoxin, putative\tLmjF06.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1240\tLmjF.06.1240\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5820\tC\tFAD binding domain containing protein, putative\tLmjF06.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1240\tLmjF.06.1240\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5820\tC\tFAD binding domain containing 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0025\tDOT1A\t\tGO:0005694\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1920\tC\thistone-lysine N-methyltransferase, putative\tLmjF07.0025\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0060\tCYC1\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1890\tC\tcytochrome c1, heme protein, mitochondrial, putative\tLmjF07.0060|CYT1\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0110\tLmjF.07.0110\t\tGO:0005509\tGO_REF:0000002\tISS\t\tF\tmitochondrial calcium uptake 1, putative\tLmjF07.0110\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0110\tLmjF.07.0110\t\tGO:0005739\tPMID:20660476|GO_REF:0000024\tISO\tGeneDB:Tb927.8.1850\tC\tmitochondrial calcium uptake 1, putative\tLmjF07.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0110\tLmjF.07.0110\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1850\tC\tmitochondrial calcium uptake 1, putative\tLmjF07.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0110\tLmjF.07.0110\t\tGO:0055074\tPMID:20693986|GO_REF:0000024\tISO\tGeneDB:Tb927.8.1850\tP\tmitochondrial calcium uptake 1, putative\tLmjF07.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0120\tLmjF.07.0120\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1840\tC\tSec7 domain containing protein, 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0200\tpgps\t\tGO:0006655\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.1720\tP\tphosphatidylglycerolphosphate synthase, mitochondrial, putative\tLmjF07.0200\tmRNA\ttaxon:347515\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0200\tpgps\t\tGO:0007005\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.1720\tP\tphosphatidylglycerolphosphate synthase, mitochondrial, putative\tLmjF07.0200\tmRNA\ttaxon:347515\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0200\tpgps\t\tGO:0033617\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.1720\tP\tphosphatidylglycerolphosphate synthase, mitochondrial, putative\tLmjF07.0200\tmRNA\ttaxon:347515\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0200\tpgps\t\tGO:0034551\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.1720\tP\tphosphatidylglycerolphosphate synthase, mitochondrial, putative\tLmjF07.0200\tmRNA\ttaxon:347515\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0250\tLmjF.07.0250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1780\tC\tSTE/STE7 protein kinase, putative\tLmjF07.0250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0280\tLmjF.07.0280\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tubiquitin-protein ligase-like, putative\tLmjF07.0280\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0290\tLmjF.07.0290\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1570\tC\tUncharacterised protein family 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0320\tLmjF.07.0320\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1540\tC\thypothetical protein, conserved\tLmjF07.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0340\tDBP2B\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1510\tF\tATP-dependent RNA helicase DBP2B, putative\tLmjF07.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0340\tDBP2B\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1510\tC\tATP-dependent RNA helicase DBP2B, putative\tLmjF07.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0340\tDBP2B\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1510\tC\tATP-dependent RNA helicase DBP2B, putative\tLmjF07.0340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0340\tDBP2B\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1510\tC\tATP-dependent RNA helicase DBP2B, putative\tLmjF07.0340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0350\tLmjF.07.0350\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1500\tF\thypothetical protein, conserved\tLmjF07.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0380\tLmjF.07.0380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1480\tC\tRAVE protein 1 C terminal, putative\tLmjF07.0380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0380\tLmjF.07.0380\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1480\tP\tRAVE protein 1 C terminal, putative\tLmjF07.0380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0400\tLmjF.07.0400\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1460\tP\tEamA-like transporter family, putative\tLmjF07.0400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0430\tHTD2-2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1440\tC\t3-hydroxyacyl-ACP dehydratase, putative\tLmjF07.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0430\tHTD2-2\t\tGO:0019171\tPMID:20145708\tIGI\t\tF\t3-hydroxyacyl-ACP dehydratase, putative\tLmjF07.0430\tmRNA\ttaxon:347515\t20100310\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0430\tHTD2-2\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1440\tC\t3-hydroxyacyl-ACP dehydratase, putative\tLmjF07.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0430\tHTD2-2\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1440\tC\t3-hydroxyacyl-ACP dehydratase, putative\tLmjF07.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0440\tHTD2-1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1440\tC\t3-hydroxyacyl-ACP dehydratase, putative\tLmjF07.0440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0440\tHTD2-1\t\tGO:0019171\tPMID:20145708\tIGI\t\tF\t3-hydroxyacyl-ACP dehydratase, putative\tLmjF07.0440\tmRNA\ttaxon:347515\t20100310\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0440\tHTD2-1\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1440\tC\t3-hydroxyacyl-ACP dehydratase, putative\tLmjF07.0440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0440\tHTD2-1\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1440\tC\t3-hydroxyacyl-ACP dehydratase, putative\tLmjF07.0440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0450\tLmjF.07.0450\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1430\tC\thypothetical protein, conserved\tLmjF07.0450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0460\tLmjF.07.0460\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1420\tC\tacyl-CoA dehydrogenase, mitochondrial precursor, putative\tLmjF07.0460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0460\tLmjF.07.0460\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1420\tC\tacyl-CoA dehydrogenase, mitochondrial precursor, putative\tLmjF07.0460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0470\tLmjF.07.0470\t\tGO:0005730\tGO_REF:0000002\tISS\tUniProtKB:Q07381\tC\tpre-rrna-processing protein tsr1 homolog\tLmjF07.0470\tmRNA\ttaxon:347515\t20131217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0470\tLmjF.07.0470\t\tGO:0005737\tGO_REF:0000002\tISS\tUniProtKB:Q07381\tC\tpre-rrna-processing protein tsr1 homolog\tLmjF07.0470\tmRNA\ttaxon:347515\t20131217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0470\tLmjF.07.0470\t\tGO:0042254\tGO_REF:0000002\tISS\tUniProtKB:Q07381\tP\tpre-rrna-processing protein tsr1 homolog\tLmjF07.0470\tmRNA\ttaxon:347515\t20131217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0480\tLmjF.07.0480\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1360\tC\tDynein heavy chain, N-terminal region 2, putative\tLmjF07.0480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0500\tLmjF.07.0500\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1330\tC\t60S ribosomal protein L7a, putative\tLmjF07.0500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0500\tLmjF.07.0500\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1330\tC\t60S ribosomal protein L7a, putative\tLmjF07.0500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0510\tLmjF.07.0510\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1330\tC\t60S ribosomal protein L7a, putative\tLmjF07.0510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0510\tLmjF.07.0510\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1330\tC\t60S ribosomal protein L7a, putative\tLmjF07.0510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0520\tAP3\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1320\tC\tQA-SNARE protein putative\tLmjF07.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0530\tLmjF.07.0530\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1310\tC\tadp/ATP carrier-like protein\tLmjF07.0530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0570\tNOP54\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1270\tC\tNucleolar protein 54, putative\tLmjF07.0570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0570\tNOP54\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1270\tC\tNucleolar protein 54, putative\tLmjF07.0570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0580\tNOP112\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1260\tC\tMolybdopterin guanine dinucleotide synthesis protein B, putative\tLmjF07.0580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0580\tNOP112\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1260\tC\tMolybdopterin guanine dinucleotide synthesis protein B, putative\tLmjF07.0580\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0640\tEIF3H\t\tGO:0005737\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\teukaryotic translation initiation factor 3 subunit h\tLmjF07.0640\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0640\tEIF3H\t\tGO:0005852\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\teukaryotic translation initiation factor 3 subunit h\tLmjF07.0640\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0680\tLmjF.07.0680\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1110\tC\t40S ribosomal protein S9, putative\tLmjF07.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0700\tLmjF.07.0700\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1090\tC\ttopoisomerase-related function protein-like protein\tLmjF07.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0710\tLmjF.07.0710\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1080\tC\tcentrin, putative\tLmjF07.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0710\tLmjF.07.0710\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1080\tC\tcentrin, putative\tLmjF07.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0730\tLmjF.07.0730\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1060\tC\tmalonyl-coa decarboxylase-like protein\tLmjF07.0730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0730\tLmjF.07.0730\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1060\tC\tmalonyl-coa decarboxylase-like protein\tLmjF07.0730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0730\tLmjF.07.0730\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1060\tC\tmalonyl-coa decarboxylase-like protein\tLmjF07.0730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0740\tLmjF.07.0740\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1050\tC\thypothetical protein, conserved\tLmjF07.0740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0740\tLmjF.07.0740\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1050\tC\thypothetical protein, conserved\tLmjF07.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0740\tLmjF.07.0740\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1050\tC\thypothetical protein, conserved\tLmjF07.0740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0780\tJ30\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1010\tC\tchaperone protein DnaJ, putative\tLmjF07.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0802\tLmjF.07.0802\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.990\tF\thypothetical protein, conserved\tLmjF07.0802\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0802\tLmjF.07.0802\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.990\tC\thypothetical protein, conserved\tLmjF07.0802\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0802\tLmjF.07.0802\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.990\tC\thypothetical protein, conserved\tLmjF07.0802\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0805\tLmjF.07.0805\t\tGO:0004610\tPMID:22676716|GO_REF:0000024\tISO\tGeneDB:Tb927.8.980|RefSeq:NP_010856.1\tF\tN-acetylglucosamine-phosphate mutase, putative\tLmjF07.0805\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0805\tLmjF.07.0805\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.980\tC\tN-acetylglucosamine-phosphate mutase, putative\tLmjF07.0805\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0805\tLmjF.07.0805\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.980\tC\tN-acetylglucosamine-phosphate mutase, putative\tLmjF07.0805\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0805\tLmjF.07.0805\t\tGO:0006041\tPMID:22676716|GO_REF:0000024\tISO\tGeneDB:Tb927.8.980|RefSeq:NP_010856.1\tP\tN-acetylglucosamine-phosphate mutase, putative\tLmjF07.0805\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0805\tLmjF.07.0805\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.980\tC\tN-acetylglucosamine-phosphate mutase, putative\tLmjF07.0805\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0820\tLmjF.07.0820\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.960\tC\thypothetical protein, unknown function\tLmjF07.0820\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0830\tLmjF.07.0830\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.960\tC\thypothetical protein, conserved\tLmjF07.0830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0840\tLmjF.07.0840\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.960\tC\thypothetical protein, conserved\tLmjF07.0840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0850\tLmjF.07.0850\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.920\tC\tubiquitin-conjugating enzyme E2, putative\tLmjF07.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0870\tLmjF.07.0870\t\tGO:0003723\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.900\tF\tsplicing factor ptsr1-like protein\tLmjF07.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0870\tLmjF.07.0870\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.900\tF\tsplicing factor ptsr1-like protein\tLmjF07.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0870\tLmjF.07.0870\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.900\tC\tsplicing factor ptsr1-like protein\tLmjF07.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0870\tLmjF.07.0870\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.900\tC\tsplicing factor ptsr1-like protein\tLmjF07.0870\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0900\tLmjF.07.0900\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.870\tC\tCAMK/CAMKL family protein kinase, putative\tLmjF07.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0900\tLmjF.07.0900\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.870\tC\tCAMK/CAMKL family protein kinase, putative\tLmjF07.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0900\tLmjF.07.0900\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.870\tC\tCAMK/CAMKL family protein kinase, putative\tLmjF07.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0930\tLmjF.07.0930\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.810\tC\thypothetical protein, conserved\tLmjF07.0930\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0970\tLmjF.07.0970\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.770\tC\thypothetical protein, conserved\tLmjF07.0970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0970\tLmjF.07.0970\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.770\tC\thypothetical protein, conserved\tLmjF07.0970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0990\tLmjF.07.0990\t\tGO:0003676\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.760\tF\tnucleolar RNA-binding protein, putative\tLmjF07.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0990\tLmjF.07.0990\t\tGO:0003723\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.760\tF\tnucleolar RNA-binding protein, putative\tLmjF07.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0990\tLmjF.07.0990\t\tGO:0004712\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.760\tF\tnucleolar RNA-binding protein, putative\tLmjF07.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0990\tLmjF.07.0990\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.760\tC\tnucleolar RNA-binding protein, putative\tLmjF07.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0990\tLmjF.07.0990\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.760\tC\tnucleolar RNA-binding protein, putative\tLmjF07.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1000\tLmjF.07.1000\t\tGO:0003723\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.730\tF\tRNA binding protein-like protein\tLmjF07.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1000\tLmjF.07.1000\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.730\tC\tRNA binding protein-like protein\tLmjF07.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1000\tLmjF.07.1000\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.730\tC\tRNA binding protein-like protein\tLmjF07.1000\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1010\tLmjF.07.1010\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.720\tC\tDomain of unknown function DUF59, putative\tLmjF07.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1010\tLmjF.07.1010\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.720\tC\tDomain of unknown function DUF59, putative\tLmjF07.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1010\tLmjF.07.1010\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.720\tC\tDomain of unknown function DUF59, putative\tLmjF07.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1020\tLmjF.07.1020\t\tGO:0000287\tPMID:19646907\tISO\tGeneDB:Tb927.8.700\tF\tDNA repair and recombination helicase protein PIF7, putative\tLmjF07.1020\tmRNA\ttaxon:347515\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1020\tLmjF.07.1020\t\tGO:0000723\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF7, putative\tLmjF07.1020\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1020\tLmjF.07.1020\t\tGO:0004003\tPMID:19646907\tISO\tGeneDB:Tb927.8.700\tF\tDNA repair and recombination helicase protein PIF7, putative\tLmjF07.1020\tmRNA\ttaxon:347515\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1020\tLmjF.07.1020\t\tGO:0005739\tPMID:19646907\tISO\tGeneDB:Tb927.8.700\tC\tDNA repair and recombination helicase protein PIF7, putative\tLmjF07.1020\tmRNA\ttaxon:347515\t20090806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1020\tLmjF.07.1020\t\tGO:0005739\tPMID:15223320\tISO\tGeneDB:Tb927.8.700\tC\tDNA repair and recombination helicase protein PIF7, putative\tLmjF07.1020\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1020\tLmjF.07.1020\t\tGO:0006310\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF7, putative\tLmjF07.1020\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1020\tLmjF.07.1020\t\tGO:0051276\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF7, putative\tLmjF07.1020\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1030\tPIN1\t\tGO:0003755\tPMID:20580912\tISO\tGeneDB:TcCLB.508567.70\tF\tpeptidyl-prolyl cis-trans isomerase/rotamase, putative\tLmjF07.1030\tmRNA\ttaxon:347515\t20100806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1030\tPIN1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.690\tC\tpeptidyl-prolyl cis-trans isomerase/rotamase, putative\tLmjF07.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1030\tPIN1\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.690\tC\tpeptidyl-prolyl cis-trans isomerase/rotamase, putative\tLmjF07.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1030\tPIN1\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.690\tC\tpeptidyl-prolyl cis-trans isomerase/rotamase, putative\tLmjF07.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1050\tLmjF.07.1050\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.650\tC\tcation-transporting ATPase, putative\tLmjF07.1050\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1070\tLmjF.07.1070\t\tGO:0000175\tPMID:15749013|GO_REF:0000024\tISO\tGeneDB:Tb927.8.620\tF\tRNA-editing complex protein, putative\tLmjF07.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1070\tLmjF.07.1070\t\tGO:0005739\tPMID:11564867|GO_REF:0000024\tISO\tGeneDB:Tb927.8.620\tC\tRNA-editing complex protein, putative\tLmjF07.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1070\tLmjF.07.1070\t\tGO:0008270\tPMID:15749013|GO_REF:0000024\tISO\tGeneDB:Tb927.8.620\tF\tRNA-editing complex protein, putative\tLmjF07.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1070\tLmjF.07.1070\t\tGO:0010038\tPMID:15749013|GO_REF:0000024\tISO\tGeneDB:Tb927.8.620\tP\tRNA-editing complex protein, putative\tLmjF07.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1070\tLmjF.07.1070\t\tGO:0016556\tPMID:11564867|GO_REF:0000024\tISO\tGeneDB:Tb927.8.620\tP\tRNA-editing complex protein, putative\tLmjF07.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1070\tLmjF.07.1070\t\tGO:0016891\tPMID:15749013|GO_REF:0000024\tISO\tGeneDB:Tb927.8.620\tF\tRNA-editing complex protein, putative\tLmjF07.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1070\tLmjF.07.1070\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.620\tC\tRNA-editing complex protein, putative\tLmjF07.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1070\tLmjF.07.1070\t\tGO:0031019\tPMID:20018860\tISO\tGeneDB:Tb927.8.620\tC\tRNA-editing complex protein, putative\tLmjF07.1070\tmRNA\ttaxon:347515\t20100205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1080\tLmjF.07.1080\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.610\tC\thypothetical protein, conserved\tLmjF07.1080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1100\tLmjF.07.1100\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.600\tC\thypothetical protein, conserved\tLmjF07.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1100\tLmjF.07.1100\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.600\tC\thypothetical protein, conserved\tLmjF07.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1100\tLmjF.07.1100\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.600\tC\thypothetical protein, conserved\tLmjF07.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1110\tMIC40\t\tGO:0061617\tPMID:30415698\tISO\tGeneDB:Tb927.8.580\tC\tMICOS complex subunit 40, putative\tLmjF07.1110\tmRNA\ttaxon:347515\t20181211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1120\tLmjF.07.1120\t\tGO:0000502\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.570\tC\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF07.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1120\tLmjF.07.1120\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.570\tC\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF07.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1120\tLmjF.07.1120\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.570\tC\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF07.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1120\tLmjF.07.1120\t\tGO:0005838\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.570\tC\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF07.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1120\tLmjF.07.1120\t\tGO:0006511\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.570\tP\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF07.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1120\tLmjF.07.1120\t\tGO:0016049\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.570\tP\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF07.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1120\tLmjF.07.1120\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.570\tC\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF07.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1130\tLmjF.07.1130\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.560\tC\thypothetical protein, conserved\tLmjF07.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1140\tLmjF.07.1140\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.550\tC\tpeptide methionine sulfoxide reductase-like\tLmjF07.1140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1140\tLmjF.07.1140\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.550\tC\tpeptide methionine sulfoxide reductase-like\tLmjF07.1140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1140\tLmjF.07.1140\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.550\tC\tpeptide methionine sulfoxide reductase-like\tLmjF07.1140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0080\tLmjF.08.0080\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3600\tC\tATP-dependent DEAD/H RNA helicase, putative\tLmjF08.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0090\tLmjF.08.0090\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3610\tP\tadaptor complex protein (AP) 3 delta subunit 1, putative\tLmjF08.0090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0120\tLmjF.08.0120\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3640\tC\thypothetical protein, conserved\tLmjF08.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0120\tLmjF.08.0120\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3640\tC\thypothetical protein, conserved\tLmjF08.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0160\tLmjF.08.0160\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3690\tC\thypothetical protein, conserved\tLmjF08.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0200\tISCL\t\tGO:0004767\tPMID:20011126\tIMP\t\tF\tInositol phosphosphingolipids phospholipase C\tLmjF08.0200\tmRNA\ttaxon:347515\t20100120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0200\tISCL\t\tGO:0005739\tPMID:20011126\tIDA\t\tC\tInositol phosphosphingolipids phospholipase C\tLmjF08.0200\tmRNA\ttaxon:347515\t20100120\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0200\tISCL\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3710\tC\tInositol phosphosphingolipids phospholipase C\tLmjF08.0200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0200\tISCL\t\tGO:0006685\tPMID:20011126\tIMP\t\tP\tInositol phosphosphingolipids phospholipase 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0240\tLmjF.08.0240\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3410\tC\thypothetical protein, conserved\tLmjF08.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0240\tLmjF.08.0240\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3410\tC\thypothetical protein, conserved\tLmjF08.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0280\tLmjF.08.0280\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3360\tC\tribosomal protein L2, 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0550\tLmjF.08.0550\t\tGO:0003743\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.3120\tF\teukaryotic translation initiation factor 2 beta subunit, putative\tLmjF08.0550\tmRNA\ttaxon:347515\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0550\tLmjF.08.0550\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3120\tC\teukaryotic translation initiation factor 2 beta subunit, putative\tLmjF08.0550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0880\tLmjF.08.0880\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2770\tC\tSET domain containing protein, putative\tLmjF08.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0890\tLmjF.08.0890\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2780\tC\tmitochondrial DNA polymerase beta\tLmjF08.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0900\tLmjF.08.0900\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2790\tC\tmitochondrial DNA polymerase beta-PAK, putative\tLmjF08.0900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0960\tLmjF.08.0960\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2850\tC\tDpy-30 motif containing protein, putative\tLmjF08.0960\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1000\tLmjF.08.1000\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2890\tC\tAAA domain (dynein-related subfamily)/von Willebrand factor type A domain containing protein, putative\tLmjF08.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1000\tLmjF.08.1000\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2890\tC\tAAA domain (dynein-related subfamily)/von Willebrand factor type A domain containing protein, putative\tLmjF08.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1000\tLmjF.08.1000\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2890\tC\tAAA domain (dynein-related subfamily)/von Willebrand factor type A domain containing protein, putative\tLmjF08.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1010\tCPB\t\tGO:0008234\tGO_REF:0000002\tEXP\t\tF\tcysteine peptidase B (CPB)\tLmjF08.1010\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1090\tLmjF.08.1090\t\tGO:0000278\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2900\tP\thistone deacetylase, putative\tLmjF08.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1090\tLmjF.08.1090\t\tGO:0004407\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2900\tF\thistone deacetylase, putative\tLmjF08.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1090\tLmjF.08.1090\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2900\tC\thistone deacetylase, putative\tLmjF08.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1100\tLmjF.08.1100\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2930\tC\thypothetical protein, conserved\tLmjF08.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1100\tLmjF.08.1100\t\tGO:0031966\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2930\tC\thypothetical protein, conserved\tLmjF08.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1101\tLmjF.08.1101\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2920\tC\tRing finger domain containing protein, putative\tLmjF08.1101\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1110\tLmjF.08.1110\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2940\tC\tstress-induced protein sti1\tLmjF08.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1110\tLmjF.08.1110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2940\tC\tstress-induced protein sti1\tLmjF08.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1110\tLmjF.08.1110\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2940\tP\tstress-induced protein sti1\tLmjF08.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1130\tLmjF.08.1130\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2960\tC\tphosphoribosylpyrophosphate synthetase\tLmjF08.1130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1140\tTSIF\t\tGO:0005886\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2970\tC\tsuppressive immunomodulating factor, putative\tLmjF08.1140\tmRNA\ttaxon:347515\t20100218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1140\tTSIF\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2970\tC\tsuppressive immunomodulating factor, putative\tLmjF08.1140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1140\tTSIF\t\tGO:0042116\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2970\tP\tsuppressive immunomodulating factor, putative\tLmjF08.1140\tmRNA\ttaxon:347515\t20100218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1140\tTSIF\t\tGO:0042534\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2970\tP\tsuppressive immunomodulating factor, putative\tLmjF08.1140\tmRNA\ttaxon:347515\t20100218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1140\tTSIF\t\tGO:0045428\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2970\tP\tsuppressive immunomodulating factor, putative\tLmjF08.1140\tmRNA\ttaxon:347515\t20100218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1170\tMRB3010\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3010\tF\tguide RNA binding protein, putative\tLmjF08.1170\tmRNA\ttaxon:347515\t20110523\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1170\tMRB3010\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3010\tC\tguide RNA binding protein, putative\tLmjF08.1170\tmRNA\ttaxon:347515\t20110523\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1170\tMRB3010\t\tGO:0006396\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3010\tP\tguide RNA binding protein, putative\tLmjF08.1170\tmRNA\ttaxon:347515\t20110523\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1170\tMRB3010\t\tGO:0043234\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3010\tC\tguide RNA binding protein, putative\tLmjF08.1170\tmRNA\ttaxon:347515\t20150105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1170\tMRB3010\t\tGO:1900864\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3010\tP\tguide RNA binding protein, putative\tLmjF08.1170\tmRNA\ttaxon:347515\t20150105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1190\tIFT122B\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3030\tC\tPutative intraflagellar transport protein D4\tLmjF08.1190|PIFTD4\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1190\tIFT122B\t\tGO:0035721\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3030\tP\tPutative intraflagellar transport protein D4\tLmjF08.1190|PIFTD4\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1190\tIFT122B\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3030\tP\tPutative intraflagellar transport protein D4\tLmjF08.1190|PIFTD4\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1200\tMIX\t\tGO:0005743\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.3040\tC\tMIX protein\tLmjF08.1200\tmRNA\ttaxon:347515\t20120821\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1200\tMIX\t\tGO:0022900\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.3040\tP\tMIX protein\tLmjF08.1200\tmRNA\ttaxon:347515\t20120821\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1200\tMIX\t\tGO:0033617\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.3040\tP\tMIX protein\tLmjF08.1200\tmRNA\ttaxon:347515\t20120821\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1200\tMIX\t\tGO:0042803\tPMID:21465610\tIDA\t\tF\tMIX protein\tLmjF08.1200\tmRNA\ttaxon:347515\t20110712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1200\tMIX\t\tGO:0070069\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.3040\tC\tMIX protein\tLmjF08.1200\tmRNA\ttaxon:347515\t20120821\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0005\tLmjF.09.0005\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12030\tC\thypothetical protein, conserved\tLmjF09.0005\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0020\tLmjF.09.0020\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12050\tC\thypothetical protein, conserved\tLmjF09.0020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0040\tGPI12\t\tGO:0000225\tPMID:12364327|GO_REF:0000024\tISO\tGeneDB:Tb927.11.12080\tF\tN-acetyl-D-acetylglucosaminylphosphatidylinositol deacetylase\tLmjF09.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0040\tGPI12\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12080\tC\tN-acetyl-D-acetylglucosaminylphosphatidylinositol deacetylase\tLmjF09.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0040\tGPI12\t\tGO:0006506\tPMID:12364327|GO_REF:0000024\tISO\tGeneDB:Tb927.11.12080\tP\tN-acetyl-D-acetylglucosaminylphosphatidylinositol deacetylase\tLmjF09.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0040\tGPI12\t\tGO:0008270\tPMID:15817455|GO_REF:0000024\tISO\tGeneDB:Tb927.11.12080|GeneDB:Tb11.01.3900\tF\tN-acetyl-D-acetylglucosaminylphosphatidylinositol deacetylase\tLmjF09.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0040\tGPI12\t\tGO:0016021\tPMID:12364327\tEXP\t\tC\tN-acetyl-D-acetylglucosaminylphosphatidylinositol deacetylase\tLmjF09.0040\tmRNA\ttaxon:347515\t20090506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0040\tGPI12\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12080\tC\tN-acetyl-D-acetylglucosaminylphosphatidylinositol deacetylase\tLmjF09.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0040\tGPI12\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12080\tC\tN-acetyl-D-acetylglucosaminylphosphatidylinositol deacetylase\tLmjF09.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0070\tLmjF.09.0070\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12110\tC\tRNA helicase, putative\tLmjF09.0070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0080\tLmjF.09.0080\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12120\tP\tRNA-binding protein 5-like protein\tLmjF09.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0100\tBILBO1\t\tGO:0044782\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12150\tP\tflagellar pocket cytoskeletal protein bilbo1\tLmjF09.0100\tmRNA\ttaxon:347515\t20151202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0110\tLmjF.09.0110\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12170\tC\thypothetical protein, conserved\tLmjF09.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0110\tLmjF.09.0110\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12170\tC\thypothetical protein, conserved\tLmjF09.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0140\tLmjF.09.0140\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12190\tC\tFHA domain/Ring finger domain containing protein, putative\tLmjF09.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0140\tLmjF.09.0140\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12190\tC\tFHA domain/Ring finger domain containing protein, putative\tLmjF09.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0220\tLmjF.09.0220\t\tGO:0006799\tPMID:19390046|GO_REF:0000024\tISO\tGeneDB:Tb927.11.12220\tP\tcatalytic subunit of the vacuolar transporter chaperone 4, putative\tLmjF09.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0220\tLmjF.09.0220\t\tGO:0008976\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12220\tF\tcatalytic subunit of the vacuolar transporter chaperone 4, putative\tLmjF09.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0220\tLmjF.09.0220\t\tGO:0020022\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12220\tC\tcatalytic subunit of the vacuolar transporter chaperone 4, putative\tLmjF09.0220\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0220\tLmjF.09.0220\t\tGO:0033254\tPMID:19390046|GO_REF:0000024\tISO\tGeneDB:Tb927.11.12220\tC\tcatalytic subunit of the vacuolar transporter chaperone 4, putative\tLmjF09.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0220\tLmjF.09.0220\t\tGO:0046872\tPMID:19390046|GO_REF:0000024\tISO\tGeneDB:Tb927.11.12220\tF\tcatalytic subunit of the vacuolar transporter chaperone 4, putative\tLmjF09.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0230\tHslU2\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12230\tC\tATP-dependent protease ATPase subunit HslU2\tLmjF09.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0230\tHslU2\t\tGO:0006264\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12230\tP\tATP-dependent protease ATPase subunit HslU2\tLmjF09.0230\tmRNA\ttaxon:347515\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0230\tHslU2\t\tGO:0009376\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12230\tC\tATP-dependent protease ATPase subunit HslU2\tLmjF09.0230\tmRNA\ttaxon:347515\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0230\tHslU2\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12230\tC\tATP-dependent protease ATPase subunit HslU2\tLmjF09.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0230\tHslU2\t\tGO:0042645\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12230\tC\tATP-dependent protease ATPase subunit HslU2\tLmjF09.0230\tmRNA\ttaxon:347515\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0240\tLmjF.09.0240\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12240\tC\tcysteine peptidase, Clan CA, family C19, putative\tLmjF09.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0240\tLmjF.09.0240\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12240\tC\tcysteine peptidase, Clan CA, family C19, putative\tLmjF09.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0240\tLmjF.09.0240\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12240\tP\tcysteine peptidase, Clan CA, family C19, putative\tLmjF09.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0003677\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12250\tF\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0003678\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12250\tF\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:LdBPK_090400.1\tF\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20101112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:LdBPK_090400.1\tC\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20101112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12250\tC\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12250\tC\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0006270\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12250\tP\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0042555\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12250\tC\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0043626\tGO_REF:0000024\tISO\tGeneDB:LdBPK_090400.1\tC\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20111003\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0044770\tGO_REF:0000024\tISO\tGeneDB:LdBPK_090400.1\tP\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20111003\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0044786\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12250\tP\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0071162\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12250\tC\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0270\tLmjF.09.0270\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12270\tC\tintegral membrane transport protein, putative\tLmjF09.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0270\tLmjF.09.0270\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12270\tC\tintegral membrane transport protein, putative\tLmjF09.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0280\tLmjF.09.0280\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12290\tC\thypothetical protein, conserved\tLmjF09.0280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0310\tCRK12\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12310\tC\tcdc2-related kinase 12\tLmjF09.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0310\tCRK12\t\tGO:0006897\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12310\tP\tcdc2-related kinase 12\tLmjF09.0310\tmRNA\ttaxon:347515\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0310\tCRK12\t\tGO:0016301\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12310\tF\tcdc2-related kinase 12\tLmjF09.0310\tmRNA\ttaxon:347515\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0365\tLmjF.09.0365\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12360\tC\tAnkyrin repeats (3 copies), putative\tLmjF09.0365\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0365\tLmjF.09.0365\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12360\tC\tAnkyrin repeats (3 copies), putative\tLmjF09.0365\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0370\tLmjF.09.0370\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12370\tC\thypothetical protein, conserved\tLmjF09.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0380\tLmjF.09.0380\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12380\tC\thypothetical protein, conserved\tLmjF09.0380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0390\tLmjF.09.0390\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12390\tC\thypothetical protein, conserved\tLmjF09.0390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0400\tKKT10\t\tGO:0000278\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12410\tP\tDual specificity protein kinase CLK1, putative\tLmjF09.0400|CLK1\tmRNA\ttaxon:347515\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0400\tKKT10\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12410\tC\tDual specificity protein kinase CLK1, putative\tLmjF09.0400|CLK1\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0400\tKKT10\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12410\tC\tDual specificity protein kinase CLK1, putative\tLmjF09.0400|CLK1\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0400\tKKT10\t\tGO:0008283\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12410\tP\tDual specificity protein kinase CLK1, putative\tLmjF09.0400|CLK1\tmRNA\ttaxon:347515\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0400\tKKT10\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12410\tC\tDual specificity protein kinase CLK1, putative\tLmjF09.0400|CLK1\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0410\tKKT19\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12410\tC\tDual specificity protein kinase CLK2, putative\tLmjF09.0410|CLK2\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0410\tKKT19\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12410\tC\tDual specificity protein kinase CLK2, putative\tLmjF09.0410|CLK2\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0410\tKKT19\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12410\tC\tDual specificity protein kinase CLK2, putative\tLmjF09.0410|CLK2\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0420\tLmjF.09.0420\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12430\tC\tcell division cycle phosphatase 14, putative\tLmjF09.0420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0440\tLmjF.09.0440\t\tGO:0020018\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12450\tC\ttetratricopeptide repeat protein 8\tLmjF09.0440\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0440\tLmjF.09.0440\t\tGO:0030669\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12450\tC\ttetratricopeptide repeat protein 8\tLmjF09.0440\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0440\tLmjF.09.0440\t\tGO:0034464\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12450\tC\ttetratricopeptide repeat protein 8\tLmjF09.0440\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0450\tLmjF.09.0450\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12460\tC\thypothetical protein, conserved\tLmjF09.0450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0470\tLmjF.09.0470\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12480\tC\tkinetoplastid-specific phospho-protein phosphatase, putative\tLmjF09.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0470\tLmjF.09.0470\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12480\tC\tkinetoplastid-specific phospho-protein phosphatase, putative\tLmjF09.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0480\tLmjF.09.0480\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12490\tC\thypothetical protein, conserved\tLmjF09.0480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0490\tLmjF.09.0490\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12500\tC\thypothetical protein, conserved\tLmjF09.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0490\tLmjF.09.0490\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12500\tC\thypothetical protein, conserved\tLmjF09.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0500\tLmjF.09.0500\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12510\tC\thypothetical protein, conserved\tLmjF09.0500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0500\tLmjF.09.0500\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12510\tC\thypothetical protein, conserved\tLmjF09.0500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0520\tFAZ3\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12530\tC\tFlagellum attachment zone protein 3\tLmjF09.0520\tmRNA\ttaxon:347515\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0520\tFAZ3\t\tGO:0071889\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12530\tF\tFlagellum attachment zone protein 3\tLmjF09.0520\tmRNA\ttaxon:347515\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0530\tLmjF.09.0530\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12540\tC\tleucine-rich repeat protein, putative\tLmjF09.0530\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0590\tLmjF.09.0590\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12600\tC\tATP-dependent DNA helicase, putative\tLmjF09.0590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0590\tLmjF.09.0590\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12600\tC\tATP-dependent DNA helicase, putative\tLmjF09.0590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0610\tLmjF.09.0610\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12620\tC\tGlucosidase II beta subunit-like, putative\tLmjF09.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0630\tLmjF.09.0630\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12640\tC\tPH domain containing protein, putative\tLmjF09.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0630\tLmjF.09.0630\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12640\tP\tPH domain containing protein, putative\tLmjF09.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0640\tLmjF.09.0640\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12650\tC\tpalmitoyl acyltransferase 5, putative\tLmjF09.0640\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0640\tLmjF.09.0640\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12650\tC\tpalmitoyl acyltransferase 5, putative\tLmjF09.0640\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0640\tLmjF.09.0640\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb11.01.4490\tP\tpalmitoyl acyltransferase 5, putative\tLmjF09.0640\tmRNA\ttaxon:347515\t20110725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0640\tLmjF.09.0640\t\tGO:0006897\tPMID:19240115\tISO\tGeneDB:Tb11.01.4490\tP\tpalmitoyl acyltransferase 5, putative\tLmjF09.0640\tmRNA\ttaxon:347515\t20110725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0640\tLmjF.09.0640\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 5, putative\tLmjF09.0640\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0640\tLmjF.09.0640\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb11.01.4490\tP\tpalmitoyl acyltransferase 5, putative\tLmjF09.0640\tmRNA\ttaxon:347515\t20110725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0650\tLmjF.09.0650\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12660\tC\tZeta toxin, putative\tLmjF09.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0660\tLmjF.09.0660\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12670\tC\tMethyltransferase TYW3, putative\tLmjF09.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0660\tLmjF.09.0660\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12670\tP\tMethyltransferase TYW3, putative\tLmjF09.0660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0670\tLmjF.09.0670\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12680\tC\tprefoldin subunit 2, putative\tLmjF09.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0670\tLmjF.09.0670\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12680\tC\tprefoldin subunit 2, putative\tLmjF09.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0720\tCPSF30\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12750\tC\tcleavage and polyadenylation specificity factor 30 kDa subunit, putative\tLmjF09.0720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0720\tCPSF30\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12750\tC\tcleavage and polyadenylation specificity factor 30 kDa subunit, putative\tLmjF09.0720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0770\tOPB\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.12850\tC\toligopeptidase b\tLmjF09.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0770\tOPB\t\tGO:0005829\tPMID:20883728\tIDA\t\tC\toligopeptidase b\tLmjF09.0770\tmRNA\ttaxon:347515\t20101012\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0770\tOPB\t\tGO:0070012\tPMID:20883728\tIMP\t\tF\toligopeptidase b\tLmjF09.0770\tmRNA\ttaxon:347515\t20101012\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0780\tLmjF.09.0780\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12860\tP\tDomain of unknown function (DUF4464), putative\tLmjF09.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0810\tLmjF.09.0810\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12910\tC\tprefoldin subunit, putative\tLmjF09.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0860\tLmjF.09.0860\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12960\tC\thypothetical protein, conserved\tLmjF09.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0890\tLmjF.09.0890\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13000\tC\tphospholipid transporting ATPase-like protein, putative\tLmjF09.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0910\tLmjF.09.0910\t\tGO:0019861\tGO_REF:0000002\tIEA\t\tC\tcalmodulin, putative\tLmjF09.0910\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0920\tLmjF.09.0920\t\tGO:0000331\tPMID:21437209\tISO\tGeneDB:TcCLB.507483.39\tC\tcalmodulin, putative\tLmjF09.0920\tmRNA\ttaxon:347515\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0930\tLmjF.09.0930\t\tGO:0005829\tPMID:21437209\tISO\tGeneDB:TcCLB.507483.39\tC\tcalmodulin, putative\tLmjF09.0930\tmRNA\ttaxon:347515\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0930\tLmjF.09.0930\t\tGO:0019861\tGO_REF:0000002\tIEA\t\tC\tcalmodulin, putative\tLmjF09.0930\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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conserved\tLmjF09.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0970\tEF1G\t\tGO:0003746\tGO_REF:0000002\tISS\t\tF\telongation factor-1 gamma\tLmjF09.0970\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0970\tEF1G\t\tGO:0005509\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.13090\tF\telongation factor-1 gamma\tLmjF09.0970\tmRNA\ttaxon:347515\t20120815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, 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"GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0970\tEF1G\t\tGO:0006414\tGO_REF:0000002\tISS\t\tP\telongation factor-1 gamma\tLmjF09.0970\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1010\tPOMP10\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13180\tC\tPresent in the outer mitochondrial membrane proteome 10\tLmjF09.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1010\tPOMP10\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13180\tC\tPresent in the outer mitochondrial membrane proteome 10\tLmjF09.1010\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1010\tPOMP10\t\tGO:0031514\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13180\tC\tPresent in the outer mitochondrial membrane proteome 10\tLmjF09.1010\tmRNA\ttaxon:347515\t20150813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1020\tLmjF.09.1020\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13200\tC\tLEM3 (ligand-effect modulator 3) family / CDC50 family, 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1050\tLmjF.09.1050\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13230\tC\tMSP (Major sperm protein) domain containing protein, putative\tLmjF09.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1050\tLmjF.09.1050\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13230\tC\tMSP (Major sperm protein) domain containing protein, putative\tLmjF09.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1050\tLmjF.09.1050\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13230\tC\tMSP (Major sperm protein) domain containing protein, putative\tLmjF09.1050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1060\tLmjF.09.1060\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13240\tC\tDNA-directed RNA polymerase III subunit, putative\tLmjF09.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1060\tLmjF.09.1060\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13240\tC\tDNA-directed RNA polymerase III subunit, putative\tLmjF09.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1060\tLmjF.09.1060\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13240\tC\tDNA-directed RNA polymerase III subunit, putative\tLmjF09.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1070\tLmjF.09.1070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13250\tC\teukaryotic translation initiation factor 2 subunit, putative\tLmjF09.1070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1120\tLmjF.09.1120\t\tGO:0003723\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13280\tF\tmitochondrial RNA binding protein 2\tLmjF09.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1120\tLmjF.09.1120\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13280\tF\tmitochondrial RNA binding protein 2\tLmjF09.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1120\tLmjF.09.1120\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13280\tC\tmitochondrial RNA binding protein 2\tLmjF09.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1120\tLmjF.09.1120\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13280\tC\tmitochondrial RNA binding protein 2\tLmjF09.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1130\tLmjF.09.1130\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13290\tC\tmitochondrial import inner membrane translocase subunit TIM17, putative\tLmjF09.1130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1130\tLmjF.09.1130\t\tGO:0005744\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13290\tC\tmitochondrial import inner membrane translocase subunit TIM17, putative\tLmjF09.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1130\tLmjF.09.1130\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13290\tP\tmitochondrial import inner membrane translocase subunit TIM17, putative\tLmjF09.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1130\tLmjF.09.1130\t\tGO:0030322\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13290\tP\tmitochondrial import inner membrane translocase subunit TIM17, putative\tLmjF09.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1130\tLmjF.09.1130\t\tGO:0031305\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13290\tC\tmitochondrial import inner membrane translocase subunit TIM17, putative\tLmjF09.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1150\tLmjF.09.1150\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13310\tC\thypothetical protein, conserved\tLmjF09.1150\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1170\tLmjF.09.1170\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13330\tC\thypothetical protein, conserved\tLmjF09.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1220\tLmjF.09.1220\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13360\tC\tAAA family ATPase, putative\tLmjF09.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1240\tLmjF.09.1240\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13380\tC\tATP-dependent helicase, putative\tLmjF09.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1240\tLmjF.09.1240\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13380\tC\tATP-dependent helicase, putative\tLmjF09.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1260\tBDF5\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13400\tC\tBromodomain factor 5, putative\tLmjF09.1260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1260\tBDF5\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13400\tC\tBromodomain factor 5, putative\tLmjF09.1260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1270\tLmjF.09.1270\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13440\tC\tmitochondrial carrier protein, putative\tLmjF09.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1270\tLmjF.09.1270\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13440\tC\tmitochondrial carrier protein, putative\tLmjF09.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1300\tLmjF.09.1300\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13470\tC\tPPPDE putative peptidase domain containing protein, putative\tLmjF09.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1315\tLmjF.09.1315\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13480\tC\thypothetical protein\tLmjF09.1315\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1315\tLmjF.09.1315\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13480\tC\thypothetical protein\tLmjF09.1315\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1315\tLmjF.09.1315\t\tGO:0097542\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13480\tC\thypothetical protein\tLmjF09.1315\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1350\tLmjF.09.1350\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13510\tC\thypothetical protein, conserved\tLmjF09.1350\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1380\tLmjF.09.1380\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13540\tC\thypothetical protein, conserved\tLmjF09.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1390\tLmjF.09.1390\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13550\tC\thypothetical protein, conserved\tLmjF09.1390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1420\tLmjF.09.1420\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13570\tC\thypothetical protein, conserved\tLmjF09.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1430\tLmjF.09.1430\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13580\tC\tubiquinone biosynthesis protein-like protein, putative\tLmjF09.1430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1430\tLmjF.09.1430\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13580\tC\tubiquinone biosynthesis protein-like protein, putative\tLmjF09.1430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1480\tJBP1\t\tGO:0003677\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13640\tF\tJ-binding 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1480\tJBP1\t\tGO:0043566\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13640|UniProtKB:Q9U6M1\tF\tJ-binding protein\tLmjF09.1480\tmRNA\ttaxon:347515\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1480\tJBP1\t\tGO:0050341\tGO_REF:0000024\tISO\tUniProtKB:Q9U6M1\tF\tJ-binding protein\tLmjF09.1480\tmRNA\ttaxon:347515\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1480\tJBP1\t\tGO:0070580\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13640\tP\tJ-binding 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1490\tLmjF.09.1490\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13650\tC\tcytochrome b5-like protein, putative\tLmjF09.1490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1490\tLmjF.09.1490\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13650\tC\tcytochrome b5-like protein, putative\tLmjF09.1490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1530\tRSP11\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:LmxM.09.1530\tC\tRadial spoke protein 11\tLmjF09.1530\tmRNA\ttaxon:347515\t20160720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1540\tLmjF.09.1540\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13700\tC\thypothetical protein, conserved\tLmjF09.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0120\tLmjF.10.0120\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3850\tF\tPSP1 C-terminal conserved region, putative\tLmjF10.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0120\tLmjF.10.0120\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3850\tC\tPSP1 C-terminal conserved region, putative\tLmjF10.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0120\tLmjF.10.0120\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3850\tP\tPSP1 C-terminal conserved region, putative\tLmjF10.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0130\tLmjF.10.0130\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3840\tC\thypothetical protein, conserved\tLmjF10.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0130\tLmjF.10.0130\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3840\tC\thypothetical protein, conserved\tLmjF10.0130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0150\tLmjF.10.0150\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3820\tC\tconserved protein, unknown function\tLmjF10.0150\tmRNA\ttaxon:347515\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0180\tLmjF.10.0180\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3790\tC\tleucine-rich repeat protein, putative\tLmjF10.0180\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0195\tLmjF.10.0195\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3780\tC\thypothetical protein, conserved\tLmjF10.0195\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0195\tLmjF.10.0195\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3780\tC\thypothetical protein, conserved\tLmjF10.0195\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0195\tLmjF.10.0195\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3780\tP\thypothetical protein, conserved\tLmjF10.0195\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0200\tMPK10\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3770\tC\tMitogen-activated protein kinase 10, putative\tLmjF10.0200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0210\tNOP56\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3750\tC\tnucleolar protein 56, putative\tLmjF10.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0210\tNOP56\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3750\tC\tnucleolar protein 56, putative\tLmjF10.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0210\tNOP56\t\tGO:0005730\tPMID:30406129\tIDA\t\tC\tnucleolar protein 56, putative\tLmjF10.0210\tmRNA\ttaxon:347515\t20181113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0210\tNOP56\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3750\tC\tnucleolar protein 56, putative\tLmjF10.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0210\tNOP56\t\tGO:0006364\tGO_REF:0000002\tISS\tUniProtKB:NOP56_YEAST\tP\tnucleolar protein 56, putative\tLmjF10.0210\tmRNA\ttaxon:347515\t20140220\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0210\tNOP56\t\tGO:0031428\tGO_REF:0000002\tISS\tUniProtKB:NOP56_YEAST\tC\tnucleolar protein 56, putative\tLmjF10.0210\tmRNA\ttaxon:347515\t20140220\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0210\tNOP56\t\tGO:0032040\tGO_REF:0000002\tISS\tUniProtKB:NOP56_YEAST\tC\tnucleolar protein 56, putative\tLmjF10.0210\tmRNA\ttaxon:347515\t20140220\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0270\tLmjF.10.0270\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3710\tC\texonuclease, putative\tLmjF10.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0300\tkkt4\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3680\tC\tkinetoplastid kinetochore protein 4, putative\tLmjF10.0300\tmRNA\ttaxon:347515\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0300\tkkt4\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3680\tC\tkinetoplastid kinetochore protein 4, putative\tLmjF10.0300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0300\tkkt4\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3680\tP\tkinetoplastid kinetochore protein 4, putative\tLmjF10.0300\tmRNA\ttaxon:347515\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0310\tLmjF.10.0310\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3660\tC\tprotein transport protein SEC23, putative\tLmjF10.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0310\tLmjF.10.0310\t\tGO:0006888\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3660\tP\tprotein transport protein SEC23, putative\tLmjF10.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0310\tLmjF.10.0310\t\tGO:0030127\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3660\tC\tprotein transport protein SEC23, putative\tLmjF10.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0360\tLmjF.10.0360\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3630\tC\tfolate/biopterin transporter, putative\tLmjF10.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0370\tLmjF.10.0370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3630\tC\tfolate/biopterin transporter, putative\tLmjF10.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0380\tLmjF.10.0380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3630\tC\tfolate/biopterin transporter, putative\tLmjF10.0380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0385\tLmjF.10.0385\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3630\tC\tfolate/biopterin transporter, putative\tLmjF10.0385\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0390\tLmjF.10.0390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3630\tC\tfolate/biopterin transporter, putative\tLmjF10.0390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0400\tLmjF.10.0400\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3630\tC\tfolate/biopterin transporter, putative\tLmjF10.0400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0460\tGP63-1\t\tGO:0008160\tPMID:19797268\tIDA\t\tF\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0460\tGP63-1\t\tGO:0075130\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0460\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0465\tGP63-2\t\tGO:0008160\tPMID:19797268\tIDA\t\tF\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0465\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0465\tGP63-2\t\tGO:0042025\tPMID:20976196\tIDA\t\tC\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0465\tmRNA\ttaxon:347515\t20101215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0465\tGP63-2\t\tGO:0044081\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0465\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0465\tGP63-2\t\tGO:0075130\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0465\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0470\tGP63-3\t\tGO:0008160\tPMID:19797268\tIDA\t\tF\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0470\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0470\tGP63-3\t\tGO:0042025\tPMID:20976196\tIDA\t\tC\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0470\tmRNA\ttaxon:347515\t20101215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0470\tGP63-3\t\tGO:0044081\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0470\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0470\tGP63-3\t\tGO:0075130\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0470\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0480\tGP63-4\t\tGO:0008160\tPMID:19797268\tIDA\t\tF\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0480\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0480\tGP63-4\t\tGO:0042025\tPMID:20976196\tIDA\t\tC\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0480\tmRNA\ttaxon:347515\t20101215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0480\tGP63-4\t\tGO:0044081\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0480\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0480\tGP63-4\t\tGO:0075130\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0480\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0483\tLmjF.10.0483\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, unknown function\tLmjF10.0483\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0510\tGPD\t\tGO:0004367\tPMID:10743613|GO_REF:0000024\tISO\tGeneDB:Tb927.8.3530\tF\tglycerol-3-phosphate dehydrogenase [NAD+], glycosomal\tLmjF10.0510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0510\tGPD\t\tGO:0005829\tPMID:10743613\tEXP\t\tC\tglycerol-3-phosphate dehydrogenase [NAD+], glycosomal\tLmjF10.0510\tmRNA\ttaxon:347515\t20090519\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0510\tGPD\t\tGO:0006072\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3530\tP\tglycerol-3-phosphate dehydrogenase [NAD+], glycosomal\tLmjF10.0510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0510\tGPD\t\tGO:0020015\tPMID:10743613|GO_REF:0000024\tISO\tGeneDB:Tb927.8.3530\tC\tglycerol-3-phosphate dehydrogenase [NAD+], glycosomal\tLmjF10.0510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0510\tGPD\t\tGO:0051287\tPMID:10743613\tIDA\t\tF\tglycerol-3-phosphate dehydrogenase [NAD+], glycosomal\tLmjF10.0510\tmRNA\ttaxon:347515\t20090519\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0530\tLmjF.10.0530\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3950\tC\thypothetical protein, conserved\tLmjF10.0530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0560\tLmjF.10.0560\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3970\tC\tzinc binding dehydrogenase-like protein\tLmjF10.0560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0570\tLmjF.10.0570\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3970\tC\tzinc-binding dehydrogenase-like protein\tLmjF10.0570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0580\tLmjF.10.0580\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3980\tC\tchromatin assembly factor 1 subunit A, putative\tLmjF10.0580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0590\tLmjF.10.0590\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3990\tC\thypothetical protein, conserved\tLmjF10.0590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", 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"TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0080144\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20130828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0090461\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20140130\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0090465\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20140130\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0740\tLmjF.10.0740\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4190\tP\thypothetical protein, conserved\tLmjF10.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0780\tLmjF.10.0780\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4210\tC\tWD domain, G-beta repeat, putative\tLmjF10.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0780\tLmjF.10.0780\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4210\tC\tWD domain, G-beta repeat, putative\tLmjF10.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0810\tLmjF.10.0810\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4240\tC\thypothetical protein, conserved\tLmjF10.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0820\tLmjF.10.0820\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4250\tC\thypothetical protein, conserved\tLmjF10.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0820\tLmjF.10.0820\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4250\tC\thypothetical protein, conserved\tLmjF10.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0830\tLmjF.10.0830\t\tGO:0004674\tGO_REF:0000002\tISS\tPANTHER:PTHR23257|Prosite:PS00108\tF\tserine/threonine-protein kinase, putative\tLmjF10.0830\tmRNA\ttaxon:347515\t20131125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0830\tLmjF.10.0830\t\tGO:0005524\tGO_REF:0000002\tISS\tProsite:PS00107\tF\tserine/threonine-protein kinase, putative\tLmjF10.0830\tmRNA\ttaxon:347515\t20131125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0830\tLmjF.10.0830\t\tGO:0006468\tGO_REF:0000002\tISS\tPANTHER:PTHR23257|Prosite:PS00108\tP\tserine/threonine-protein kinase, putative\tLmjF10.0830\tmRNA\ttaxon:347515\t20131125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0850\tLmjF.10.0850\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4280\tC\tnuclear transport factor 2, putative\tLmjF10.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0850\tLmjF.10.0850\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4280\tC\tnuclear transport factor 2, putative\tLmjF10.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0860\tLmjF.10.0860\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4290\tC\tRibosome biogenesis protein Nop16, putative\tLmjF10.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0860\tLmjF.10.0860\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4290\tC\tRibosome biogenesis protein Nop16, putative\tLmjF10.0860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0910\tRab11\t\tGO:0000331\tPMID:21437209\tISO\tGeneDB:TcCLB.511407.60\tC\tsmall GTP-binding protein Rab11, putative\tLmjF10.0910\tmRNA\ttaxon:347515\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0910\tRab11\t\tGO:0005768\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4330\tC\tsmall GTP-binding protein Rab11, putative\tLmjF10.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0910\tRab11\t\tGO:0012505\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4330\tC\tsmall GTP-binding protein Rab11, putative\tLmjF10.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0910\tRab11\t\tGO:0016197\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4330\tP\tsmall GTP-binding protein Rab11, putative\tLmjF10.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0920\tLmjF.10.0920\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4340\tP\thypothetical protein, conserved\tLmjF10.0920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0930\tLmjF.10.0930\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4360\tC\thypothetical protein, conserved (pseudogene)\tLmjF10.0930\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0935\tLmjF.10.0935\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4360\tC\thypothetical protein\tLmjF10.0935\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0940\tLmjF.10.0940\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4370\tC\thypothetical protein, conserved\tLmjF10.0940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0940\tLmjF.10.0940\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4370\tP\thypothetical protein, conserved\tLmjF10.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0940\tLmjF.10.0940\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4370\tC\thypothetical protein, conserved\tLmjF10.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0945\tATOM12\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4380\tC\tPresent in the outer mitochondrial membrane proteome 40\tLmjF10.0945|POMP40\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0945\tATOM12\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4380\tC\tPresent in the outer mitochondrial membrane proteome 40\tLmjF10.0945|POMP40\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0945\tATOM12\t\tGO:0005742\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4380\tC\tPresent in the outer mitochondrial membrane proteome 40\tLmjF10.0945|POMP40\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0945\tATOM12\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4380\tP\tPresent in the outer mitochondrial membrane proteome 40\tLmjF10.0945|POMP40\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0945\tATOM12\t\tGO:0030150\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4380\tP\tPresent in the outer mitochondrial membrane proteome 40\tLmjF10.0945|POMP40\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0950\tEIF2BB\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4390\tC\ttranslation initiation factor eIF-2B subunit beta, putative\tLmjF10.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0960\tLmjF.10.0960\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4400\tC\thypothetical protein, conserved\tLmjF10.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1010\tLmjF.10.1010\t\tGO:0004850\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4430\tF\tnucleoside phosphorylase-like protein\tLmjF10.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1010\tLmjF.10.1010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4430\tC\tnucleoside phosphorylase-like protein\tLmjF10.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1010\tLmjF.10.1010\t\tGO:0009116\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4430\tP\tnucleoside phosphorylase-like protein\tLmjF10.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1010\tLmjF.10.1010\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4430\tC\tnucleoside phosphorylase-like protein\tLmjF10.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1020\tLmjF.10.1020\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4440\tC\tcarrier protein, putative\tLmjF10.1020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1030\tLmjF.10.1030\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4450\tC\tRNA-binding protein-like protein\tLmjF10.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1030\tLmjF.10.1030\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4450\tC\tRNA-binding protein-like protein\tLmjF10.1030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1040\tLmjF.10.1040\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4460\tC\tDomain of Unknown Function (DUF1042), putative\tLmjF10.1040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1050\tJ40\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4470\tC\tDnaJ domain containing protein, putative\tLmjF10.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1060\tLmjF.10.1060\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4480\tC\thypothetical protein, conserved\tLmjF10.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1080\teif4g5\t\tGO:0003676\tPMID:15694484\tISA\tUniProtKB:Q04637\tF\tEukaryotic translation initiation factor 4 gamma 5\tLmjF10.1080\tmRNA\ttaxon:347515\t20100330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1080\teif4g5\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4500\tF\tEukaryotic translation initiation factor 4 gamma 5\tLmjF10.1080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1080\teif4g5\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:IF4G1_MOUSE\tC\tEukaryotic translation initiation factor 4 gamma 5\tLmjF10.1080\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1080\teif4g5\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4500\tC\tEukaryotic translation initiation factor 4 gamma 5\tLmjF10.1080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1080\teif4g5\t\tGO:0006139\tPMID:15694484\tISA\tUniProtKB:Q04637\tP\tEukaryotic translation initiation factor 4 gamma 5\tLmjF10.1080\tmRNA\ttaxon:347515\t20100330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1080\teif4g5\t\tGO:0006412\tPMID:15694484\tISA\tUniProtKB:Q04637\tP\tEukaryotic translation initiation factor 4 gamma 5\tLmjF10.1080\tmRNA\ttaxon:347515\t20100330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1080\teif4g5\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4500\tP\tEukaryotic translation initiation factor 4 gamma 5\tLmjF10.1080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1080\teif4g5\t\tGO:0016281\tGO_REF:0000024\tISO\tGeneDB:927.8.4500\tC\tEukaryotic translation initiation factor 4 gamma 5\tLmjF10.1080\tmRNA\ttaxon:347515\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1110\tPBP1\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4540\tF\tPAB1-binding protein , putative\tLmjF10.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1110\tPBP1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4540\tC\tPAB1-binding protein , putative\tLmjF10.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1110\tPBP1\t\tGO:0005844\tGO_REF:0000012\tISA\tUniProtKB:PBP1_YEAST\tC\tPAB1-binding protein , putative\tLmjF10.1110\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1110\tPBP1\t\tGO:0010494\tGO_REF:0000012\tISA\tUniProtKB:PBP1_YEAST\tC\tPAB1-binding protein , putative\tLmjF10.1110\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1110\tPBP1\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4540\tP\tPAB1-binding protein , putative\tLmjF10.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1110\tPBP1\t\tGO:0034063\tGO_REF:0000012\tISA\tUniProtKB:PBP1_YEAST\tP\tPAB1-binding protein , putative\tLmjF10.1110\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1110\tPBP1\t\tGO:0045727\tGO_REF:0000012\tISA\tUniProtKB:PBP1_YEAST\tP\tPAB1-binding protein , putative\tLmjF10.1110\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1120\tLmjF.10.1120\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4550\tC\thypothetical protein, conserved\tLmjF10.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1150\tLmjF.10.1150\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4580\tC\tTumour suppressor, Mitostatin, putative\tLmjF10.1150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1150\tLmjF.10.1150\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4580\tC\tTumour suppressor, Mitostatin, putative\tLmjF10.1150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1150\tLmjF.10.1150\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4580\tC\tTumour suppressor, Mitostatin, putative\tLmjF10.1150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1160\tRABX1\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4610\tC\tRas-related protein RabX1, putative\tLmjF10.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1160\tRABX1\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4610\tC\tRas-related protein RabX1, putative\tLmjF10.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1160\tRABX1\t\tGO:0016021\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4610\tC\tRas-related protein RabX1, putative\tLmjF10.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1190\tLmjF.10.1190\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4640\tC\tflagellar protofilament ribbon protein-like protein\tLmjF10.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1190\tLmjF.10.1190\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4640\tC\tflagellar protofilament ribbon protein-like protein\tLmjF10.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1195\tLmjF.10.1195\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4650\tP\thypothetical protein, conserved\tLmjF10.1195\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1227\tKKT20\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4760\tC\tkinetoplastid kinetochore protein 20\tLmjF10.1227\tmRNA\ttaxon:347515\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0040\tABCH1\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tATP-binding cassette protein subfamily H, member 1, putative\tLmjF11.0040\tmRNA\ttaxon:347515\t20090609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0050\tLmjF.11.0050\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7211\tC\tSNF2/RAD54 related DNA helicase, putative\tLmjF11.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0050\tLmjF.11.0050\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7211\tC\tSNF2/RAD54 related DNA helicase, putative\tLmjF11.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0060\tLmjF.11.0060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7210\tC\teukaryotic translation initiation factor 2-alpha kinase, putative\tLmjF11.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0080\tLmjF.11.0080\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7190\tC\thypothetical protein, conserved\tLmjF11.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0090\tLmjF.11.0090\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7180\tC\tMORN repeat, putative\tLmjF11.0090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0100\tSerRS\t\tGO:0004828\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7170\tF\tseryl-tRNA synthetase\tLmjF11.0100\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0100\tSerRS\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR002314\tF\tseryl-tRNA synthetase\tLmjF11.0100\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0100\tSerRS\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7170\tC\tseryl-tRNA synthetase\tLmjF11.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0100\tSerRS\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7170\tC\tseryl-tRNA synthetase\tLmjF11.0100\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0100\tSerRS\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7170\tC\tseryl-tRNA synthetase\tLmjF11.0100\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0100\tSerRS\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7170\tC\tseryl-tRNA synthetase\tLmjF11.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0100\tSerRS\t\tGO:0006434\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7170\tP\tseryl-tRNA synthetase\tLmjF11.0100\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 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RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0180\tLmjF.11.0180\t\tGO:0005737\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.7100\tC\tcytoplasmic translation machinery associated protein, putative\tLmjF11.0180\tmRNA\ttaxon:347515\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0180\tLmjF.11.0180\t\tGO:0006412\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.7100\tP\tcytoplasmic translation machinery associated protein, putative\tLmjF11.0180\tmRNA\ttaxon:347515\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0320\tPIF2\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6900\tC\tDNA repair and recombination helicase protein PIF2, putative\tLmjF11.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0320\tPIF2\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6900\tC\tDNA repair and recombination helicase protein PIF2, putative\tLmjF11.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0320\tPIF2\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6900\tC\tDNA repair and recombination helicase protein PIF2, putative\tLmjF11.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0330\tLmjF.11.0330\t\tGO:0000287\tPMID:20042610|GO_REF:0000024\tISO\tGeneDB:Tb927.11.6890|GeneDB:Tb11.02.4730\tF\tPIF1 helicase-like protein, putative\tLmjF11.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0330\tLmjF.11.0330\t\tGO:0000723\tGO_REF:0000002\tISS\t\tP\tPIF1 helicase-like protein, putative\tLmjF11.0330\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0330\tLmjF.11.0330\t\tGO:0004003\tPMID:20042610|GO_REF:0000024\tISO\tGeneDB:Tb927.11.6890|GeneDB:Tb11.02.4730\tF\tPIF1 helicase-like protein, putative\tLmjF11.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0330\tLmjF.11.0330\t\tGO:0005634\tGO_REF:0000002\tISS\t\tC\tPIF1 helicase-like protein, putative\tLmjF11.0330\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0330\tLmjF.11.0330\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tPIF1 helicase-like protein, putative\tLmjF11.0330\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0330\tLmjF.11.0330\t\tGO:0005739\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.11.6890\tC\tPIF1 helicase-like protein, putative\tLmjF11.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0330\tLmjF.11.0330\t\tGO:0006310\tGO_REF:0000002\tISS\t\tP\tPIF1 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0350\t14-3-3-II\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6870\tC\t14-3-3 protein 2, putative\tLmjF11.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0350\t14-3-3-II\t\tGO:0006897\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6870\tP\t14-3-3 protein 2, putative\tLmjF11.0350\tmRNA\ttaxon:347515\t20091207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0350\t14-3-3-II\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6870\tP\t14-3-3 protein 2, putative\tLmjF11.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0350\t14-3-3-II\t\tGO:0016281\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5020|GeneDB:Tb927.11.6870|GeneDB:Tb927.9.5460\tC\t14-3-3 protein 2, putative\tLmjF11.0350\tmRNA\ttaxon:347515\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0350\t14-3-3-II\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6870\tC\t14-3-3 protein 2, putative\tLmjF11.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0350\t14-3-3-II\t\tGO:1902412\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6870\tP\t14-3-3 protein 2, putative\tLmjF11.0350\tmRNA\ttaxon:347515\t20150707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0360\tLmjF.11.0360\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6850\tC\tOptic atrophy 3 protein (OPA3), putative\tLmjF11.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0370\tLmjF.11.0370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6840\tC\thypothetical protein, conserved\tLmjF11.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0380\tLmjF.11.0380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6830\tC\tDomain of unknown function(DUF2779), putative\tLmjF11.0380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0390\tLmjF.11.0390\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6820\tC\thypothetical protein, conserved\tLmjF11.0390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0410\tNOP89\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6790\tC\tNucleolar protein 89, putative\tLmjF11.0410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0410\tNOP89\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6790\tC\tNucleolar protein 89, putative\tLmjF11.0410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0420\tLmjF.11.0420\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6780\tC\tchromatin binding protein, putative\tLmjF11.0420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0420\tLmjF.11.0420\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6780\tC\tchromatin binding protein, putative\tLmjF11.0420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0420\tLmjF.11.0420\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6780\tC\tchromatin binding protein, putative\tLmjF11.0420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0430\tLmjF.11.0430\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6770\tC\thypothetical protein, conserved\tLmjF11.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0430\tLmjF.11.0430\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6770\tC\thypothetical protein, conserved\tLmjF11.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0470\tPUF10\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6740\tF\tpumillio protein 10, putative\tLmjF11.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0470\tPUF10\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6740\tC\tpumillio protein 10, putative\tLmjF11.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0470\tPUF10\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6740\tC\tpumillio protein 10, putative\tLmjF11.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0470\tPUF10\t\tGO:0006364\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6740\tP\tpumillio protein 10, putative\tLmjF11.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0480\tLmjF.11.0480\t\tGO:0004482\tGO_REF:0000011\tISM\tPANTHER:PTHR12189:SF3|InterPro:IPR004971\tF\tmRNA cap guanine-N7 methyltransferase, putative\tLmjF11.0480\tmRNA\ttaxon:347515\t20140711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0480\tLmjF.11.0480\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6720\tC\tmRNA cap guanine-N7 methyltransferase, putative\tLmjF11.0480\tmRNA\ttaxon:347515\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0480\tLmjF.11.0480\t\tGO:0016281\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6720\tC\tmRNA cap guanine-N7 methyltransferase, putative\tLmjF11.0480\tmRNA\ttaxon:347515\t20140711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0520\tAAT15\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6680\tC\tamino acid permease/transporter, putative\tLmjF11.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0550\tNT4\t\tGO:0015205\tPMID:19366701\tIDA\t\tF\tnucleobase transporter\tLmjF11.0550\tmRNA\ttaxon:347515\t20090604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0550\tNT4\t\tGO:0015851\tPMID:19366701\tIDA\t\tP\tnucleobase transporter\tLmjF11.0550\tmRNA\ttaxon:347515\t20090604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0560\tLmjF.11.0560\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6660\tC\ttranscription modulator/accessory protein, putative\tLmjF11.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0580\tLmjF.11.0580\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6640\tC\tcytochrome b5, putative\tLmjF11.0580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0590\tLmjF.11.0590\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6630\tC\t3-methylcrotonoyl-CoA carboxylase beta subunit, putative\tLmjF11.0590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0600\tNOP47\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6620\tC\tNucleolar protein 47, putative\tLmjF11.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0600\tNOP47\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6620\tC\tNucleolar protein 47, putative\tLmjF11.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0610\tLmjF.11.0610\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6600\tC\tconserved protein, unknown function\tLmjF11.0610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0610\tLmjF.11.0610\t\tGO:0009372\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6600\tP\tconserved protein, unknown function\tLmjF11.0610\tmRNA\ttaxon:347515\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0610\tLmjF.11.0610\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6600\tC\tconserved protein, unknown function\tLmjF11.0610\tmRNA\ttaxon:347515\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0610\tLmjF.11.0610\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6600\tP\tconserved protein, unknown function\tLmjF11.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0610\tLmjF.11.0610\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6600\tC\tconserved protein, unknown function\tLmjF11.0610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0610\tLmjF.11.0610\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6600\tP\tconserved protein, unknown function\tLmjF11.0610\tmRNA\ttaxon:347515\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0610\tLmjF.11.0610\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6600\tC\tconserved protein, unknown function\tLmjF11.0610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0620\tLmjF.11.0620\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6590\tC\taminopeptidase, putative\tLmjF11.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0630\tLmjF.11.0630\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6590\tC\taminopeptidase, putative\tLmjF11.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0650\tLmjF.11.0650\t\tGO:0005886\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tC\tProtein Associated with Differentiation, putative\tLmjF11.0650\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0650\tLmjF.11.0650\t\tGO:0009266\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tP\tProtein Associated with Differentiation, putative\tLmjF11.0650\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0650\tLmjF.11.0650\t\tGO:0009986\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tC\tProtein Associated with Differentiation, putative\tLmjF11.0650\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0650\tLmjF.11.0650\t\tGO:0015746\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tP\tProtein Associated with Differentiation, putative\tLmjF11.0650\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0650\tLmjF.11.0650\t\tGO:0050793\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tP\tProtein Associated with Differentiation, putative\tLmjF11.0650\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0660\tLmjF.11.0660\t\tGO:0005886\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tC\tProtein Associated with Differentiation, putative\tLmjF11.0660\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0660\tLmjF.11.0660\t\tGO:0009266\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tP\tProtein Associated with Differentiation, putative\tLmjF11.0660\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0660\tLmjF.11.0660\t\tGO:0009986\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tC\tProtein Associated with Differentiation, putative\tLmjF11.0660\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0660\tLmjF.11.0660\t\tGO:0015746\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tP\tProtein Associated with Differentiation, putative\tLmjF11.0660\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0660\tLmjF.11.0660\t\tGO:0050793\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tP\tProtein Associated with Differentiation, putative\tLmjF11.0660\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0710\tLmjF.11.0710\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6560\tC\thypothetical protein, conserved\tLmjF11.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0720\tLmjF.11.0720\t\tGO:0020023\tPMID:19714224|GO_REF:0000024\tISO\tGeneDB:Tb927.11.6550|GeneDB:Tb11.02.4400\tC\tPUF nine target 1\tLmjF11.0720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0740\tLmjF.11.0740\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6530\tC\thypothetical protein, conserved\tLmjF11.0740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0760\tLmjF.11.0760\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6510\tC\t40S ribosomal protein S21, putative\tLmjF11.0760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0780\tLmjF.11.0780\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6510\tC\t40S ribosomal protein S21, putative\tLmjF11.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0800\tMIC16\t\tGO:0061617\tPMID:30415698\tISO\tGeneDB:Tb927.11.6470\tC\tMICOS complex subunit MIC16, putative\tLmjF11.0800\tmRNA\ttaxon:347515\t20181211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0810\tLmjF.11.0810\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6460\tC\thypothetical protein, conserved\tLmjF11.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0810\tLmjF.11.0810\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6460\tC\thypothetical protein, conserved\tLmjF11.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0810\tLmjF.11.0810\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6460\tC\thypothetical protein, conserved\tLmjF11.0810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0820\tLmjF.11.0820\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6440\tF\thypothetical protein, conserved\tLmjF11.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0820\tLmjF.11.0820\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6440\tC\thypothetical protein, conserved\tLmjF11.0820\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0820\tLmjF.11.0820\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6440\tP\thypothetical protein, conserved\tLmjF11.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0830\tLmjF.11.0830\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6430\tF\thypothetical protein, conserved\tLmjF11.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0830\tLmjF.11.0830\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6430\tC\thypothetical protein, conserved\tLmjF11.0830\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0830\tLmjF.11.0830\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6430\tP\thypothetical protein, conserved\tLmjF11.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0860\tLmjF.11.0860\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6420\tC\thypothetical protein, conserved\tLmjF11.0860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0870\tLmjF.11.0870\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6400\tC\tkinesin, putative\tLmjF11.0870\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0870\tLmjF.11.0870\t\tGO:0005871\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6400\tC\tkinesin, putative\tLmjF11.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0870\tLmjF.11.0870\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6400\tC\tkinesin, putative\tLmjF11.0870\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0880\tLmjF.11.0880\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6390\tC\tSTART domain containing protein, putative\tLmjF11.0880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0900\tLmjF.11.0900\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6360\tC\t60S ribosomal protein L24, putative\tLmjF11.0900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0910\tBDF7\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6350\tC\tBDF-ATPase, putative\tLmjF11.0910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0960\tLmjF.11.0960\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6300\tF\t40S ribosomal protein S5\tLmjF11.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0960\tLmjF.11.0960\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6300\tC\t40S ribosomal protein S5\tLmjF11.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0960\tLmjF.11.0960\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6300\tC\t40S ribosomal protein S5\tLmjF11.0960\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0970\tLmjF.11.0970\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6300\tF\t40S ribosomal protein S5\tLmjF11.0970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0970\tLmjF.11.0970\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6300\tC\t40S ribosomal protein S5\tLmjF11.0970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0970\tLmjF.11.0970\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6300\tC\t40S ribosomal protein S5\tLmjF11.0970\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1000\tLmjF.11.1000\t\tGO:0004743\tPMID:19497128\tRCA\t\tF\tpyruvate phosphate dikinase, putative\tLmjF11.1000\tmRNA\ttaxon:347515\t20100820\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1000\tLmjF.11.1000\t\tGO:0006094\tPMID:19497128\tRCA\t\tP\tpyruvate phosphate dikinase, putative\tLmjF11.1000\tmRNA\ttaxon:347515\t20100820\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1000\tLmjF.11.1000\t\tGO:0020015\tGO_REF:0000002\tISO\tGeneDB:Tc00.1047053506297.190\tC\tpyruvate phosphate dikinase, putative\tLmjF11.1000\tmRNA\ttaxon:347515\t20100820\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1010\tLmjF.11.1010\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6270\tC\tinositol-1,4,5-trisphosphate (IP3) 5-phosphatase, putative\tLmjF11.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1030\tLmjF.11.1030\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6250\tC\thypothetical protein, conserved\tLmjF11.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1040\tLmjF.11.1040\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6240\tC\thypothetical protein, conserved\tLmjF11.1040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1040\tLmjF.11.1040\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6240\tP\thypothetical protein, conserved\tLmjF11.1040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1050\tLmjF.11.1050\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6230\tC\tpretranslocation protein, alpha subunit, putative\tLmjF11.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1080\tLmjF.11.1080\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb11.02.4090\tP\tpalmitoyl acyltransferase 7, putative\tLmjF11.1080\tmRNA\ttaxon:347515\t20110817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1080\tLmjF.11.1080\t\tGO:0006897\tPMID:19240115\tISO\tGeneDB:Tb11.02.4090\tP\tpalmitoyl acyltransferase 7, putative\tLmjF11.1080\tmRNA\ttaxon:347515\t20110817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1080\tLmjF.11.1080\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 7, putative\tLmjF11.1080\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1080\tLmjF.11.1080\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb11.02.4090\tP\tpalmitoyl acyltransferase 7, putative\tLmjF11.1080\tmRNA\ttaxon:347515\t20110817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1090\tLmjF.11.1090\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb11.02.4090\tP\tpalmitoyl acyltransferase 7, putative\tLmjF11.1090\tmRNA\ttaxon:347515\t20110817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1090\tLmjF.11.1090\t\tGO:0006897\tPMID:19240115\tISO\tGeneDB:Tb11.02.4090\tP\tpalmitoyl acyltransferase 7, putative\tLmjF11.1090\tmRNA\ttaxon:347515\t20110817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1090\tLmjF.11.1090\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 7, putative\tLmjF11.1090\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1090\tLmjF.11.1090\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb11.02.4090\tP\tpalmitoyl acyltransferase 7, putative\tLmjF11.1090\tmRNA\ttaxon:347515\t20110817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1090\tLmjF.11.1090\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6220\tC\tpalmitoyl acyltransferase 7, putative\tLmjF11.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1100\tCYP51\t\tGO:0000902\tPMID:25340392\tIMP\t\tP\tLanosterol 14-alpha demethylase\tLmjF11.1100|LDM|C14DM\tmRNA\ttaxon:347515\t20181113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1100\tCYP51\t\tGO:0000910\tPMID:25340392\tIMP\t\tP\tLanosterol 14-alpha demethylase\tLmjF11.1100|LDM|C14DM\tmRNA\ttaxon:347515\t20181113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1100\tCYP51\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6210\tC\tLanosterol 14-alpha demethylase\tLmjF11.1100|LDM|C14DM\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1100\tCYP51\t\tGO:0005739\tPMID:25340392\tIDA\t\tC\tLanosterol 14-alpha demethylase\tLmjF11.1100|LDM|C14DM\tmRNA\ttaxon:347515\t20181114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1100\tCYP51\t\tGO:0005783\tPMID:25340392|GO_REF:0000024\tISO\tGeneDB:Tb927.11.6210\tC\tLanosterol 14-alpha demethylase\tLmjF11.1100|LDM|C14DM\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1100\tCYP51\t\tGO:0008398\tGO_REF:0000024\tISO\tGeneDB:LinJ.11.1100\tF\tLanosterol 14-alpha demethylase\tLmjF11.1100|LDM|C14DM\tmRNA\ttaxon:347515\t20110707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1100\tCYP51\t\tGO:0009408\tPMID:25340392\tIMP\t\tP\tLanosterol 14-alpha demethylase\tLmjF11.1100|LDM|C14DM\tmRNA\ttaxon:347515\t20181113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1100\tCYP51\t\tGO:0020037\tGO_REF:0000024\tISO\tGeneDB:LinJ.11.1100\tF\tLanosterol 14-alpha demethylase\tLmjF11.1100|LDM|C14DM\tmRNA\ttaxon:347515\t20101112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1100\tCYP51\t\tGO:0044091\tGO_REF:0000024\tISO\tGeneDB:LinJ.11.1100\tP\tLanosterol 14-alpha demethylase\tLmjF11.1100|LDM|C14DM\tmRNA\ttaxon:347515\t20110707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1100\tCYP51\t\tGO:0061024\tPMID:25340392\tIMP\t\tP\tLanosterol 14-alpha demethylase\tLmjF11.1100|LDM|C14DM\tmRNA\ttaxon:347515\t20181114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1110\tLmjF.11.1110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6200\tC\t60S ribosomal protein L28, putative\tLmjF11.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1130\tLmjF.11.1130\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6200\tC\t60S ribosomal protein L28, putative\tLmjF11.1130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1160\tLmjF.11.1160\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6170\tP\tprotein transport protein SEC31, putative\tLmjF11.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1160\tLmjF.11.1160\t\tGO:0070971\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6170\tC\tprotein transport protein SEC31, putative\tLmjF11.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1170\tLmjF.11.1170\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6160\tF\teukaryotic release factor 3, putative\tLmjF11.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1170\tLmjF.11.1170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6160\tC\teukaryotic release factor 3, putative\tLmjF11.1170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1170\tLmjF.11.1170\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6160\tP\teukaryotic release factor 3, putative\tLmjF11.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1180\tLmjF.11.1180\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6150\tC\t60Kd inner membrane protein, putative\tLmjF11.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1180\tLmjF.11.1180\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6150\tC\t60Kd inner membrane protein, putative\tLmjF11.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1210\tLmjF.11.1210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6130\tC\tSKP1-like protein\tLmjF11.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1210\tLmjF.11.1210\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6130\tC\tSKP1-like protein\tLmjF11.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1210\tLmjF.11.1210\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001232\tP\tSKP1-like protein\tLmjF11.1210\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1210\tLmjF.11.1210\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6130\tP\tSKP1-like protein\tLmjF11.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1220\tABCA2\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6120\tC\tATP-binding cassette protein subfamily A, member 2, putative\tLmjF11.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1240\tABCA3\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6120\tC\tATP-binding cassette protein subfamily A, member 3, putative\tLmjF11.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1250\tABCA4\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6120\tC\tATP-binding cassette protein subfamily A, member 4, putative\tLmjF11.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1270\tABCA5\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6120\tC\tATP-binding cassette protein subfamily A, member 5, putative\tLmjF11.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1280\tLmjF.11.1280\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6090\tC\ttatD related deoxyribonuclease, putative\tLmjF11.1280\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1290\tABCA6\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6120\tC\tATP-binding cassette protein subfamily A, member 6, putative\tLmjF11.1290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1310\tLmjF.11.1310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6070\tC\thypothetical protein, conserved\tLmjF11.1310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1310\tLmjF.11.1310\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6070\tC\thypothetical protein, conserved\tLmjF11.1310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1330\tLmjF.11.1330\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6050\tC\tFlagellar-associated PapD-like, putative\tLmjF11.1330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1340\tLmjF.11.1340\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6040\tC\tNodulin-like/Major Facilitator Superfamily, putative\tLmjF11.1340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1360\tLmjF.11.1360\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.6000\tC\tribosomal protein L4/L1 family, putative\tLmjF11.1360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1360\tLmjF.11.1360\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6000\tC\tribosomal protein L4/L1 family, putative\tLmjF11.1360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1370\tLmjF.11.1370\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5990\tC\ttRNA pseudouridine synthase D (TruD), putative\tLmjF11.1370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0010\tLmjF.12.0010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1280\tC\ttranslation initiation factor EIF-2b alpha subunit, putative\tLmjF12.0010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0010\tLmjF.12.0010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1280\tC\ttranslation initiation factor EIF-2b alpha subunit, putative\tLmjF12.0010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0030\tLmjF.12.0030\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1260\tC\tproteasome beta-1 subunit, putative\tLmjF12.0030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0030\tLmjF.12.0030\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1260\tC\tproteasome beta-1 subunit, putative\tLmjF12.0030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0040\tMRPS29\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1250\tC\tMitochondrial SSU ribosomal protein 29, putative\tLmjF12.0040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0040\tMRPS29\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1250\tC\tMitochondrial SSU ribosomal protein 29, putative\tLmjF12.0040\tmRNA\ttaxon:347515\t20150127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0040\tMRPS29\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1250\tC\tMitochondrial SSU ribosomal protein 29, putative\tLmjF12.0040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0040\tMRPS29\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1250\tC\tMitochondrial SSU ribosomal protein 29, putative\tLmjF12.0040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0080\tkkt6\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1210\tC\tkinetoplastid kinetochore protein 6, putative\tLmjF12.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0080\tkkt6\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1210\tC\tkinetoplastid kinetochore protein 6, putative\tLmjF12.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0080\tkkt6\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1210\tP\tkinetoplastid kinetochore protein 6, putative\tLmjF12.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0090\tLmjF.12.0090\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1200\tF\thypothetical protein, conserved\tLmjF12.0090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0120\tLmjF.12.0120\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1180\tC\thypothetical protein, conserved\tLmjF12.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0160\tALG9\t\tGO:0000026\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1140\tF\tdolichyl-P-Man:GDP-Man5GlcNAc2-PP-dolichyl alpha-1,2-mannosyltransferase, putative\tLmjF12.0160\tmRNA\ttaxon:347515\t20100907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0160\tALG9\t\tGO:0006488\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1140\tP\tdolichyl-P-Man:GDP-Man5GlcNAc2-PP-dolichyl alpha-1,2-mannosyltransferase, putative\tLmjF12.0160\tmRNA\ttaxon:347515\t20100907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0180\tLmjF.12.0180\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1120\tC\thypothetical protein, conserved\tLmjF12.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0180\tLmjF.12.0180\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1120\tC\thypothetical protein, conserved\tLmjF12.0180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0210\tLmjF.12.0210\t\tGO:0005838\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1090\tC\tproteasome regulatory ATPase subunittcc1l8.3, putative\tLmjF12.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0220\tLmjF.12.0220\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1080\tC\tglyoxalase II, putative\tLmjF12.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0230\tLmjF.12.0230\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1070\tC\thypothetical protein, conserved\tLmjF12.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0250\tLmjF.12.0250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.950\tC\tcysteinyl-tRNA synthetase, putative\tLmjF12.0250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0280\tODC\t\tGO:0004586\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13730\tF\tornithine decarboxylase, putative\tLmjF12.0280\tmRNA\ttaxon:347515\t20150127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0300\tLmjF.12.0300\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.890\tC\thypothetical protein, conserved\tLmjF12.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0350\tLmjF.12.0350\t\tGO:0001104\tGO_REF:0000002\tISO\tGeneDB:Tb927.6.850\tF\tCCR4-NOT transcription complex subunit 2, putative\tLmjF12.0350\tmRNA\ttaxon:347515\t20120319\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0350\tLmjF.12.0350\t\tGO:0005634\tPMID:18442996\tISO\tGeneDB:Tb927.6.850\tC\tCCR4-NOT transcription complex subunit 2, putative\tLmjF12.0350\tmRNA\ttaxon:347515\t20120319\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0350\tLmjF.12.0350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.850\tC\tCCR4-NOT transcription complex subunit 2, putative\tLmjF12.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0350\tLmjF.12.0350\t\tGO:0006355\tGO_REF:0000002\tISO\tGeneDB:Tb927.6.850\tP\tCCR4-NOT transcription complex subunit 2, putative\tLmjF12.0350\tmRNA\ttaxon:347515\t20120319\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0350\tLmjF.12.0350\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.850\tP\tCCR4-NOT transcription complex subunit 2, putative\tLmjF12.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0370\tLmjF.12.0370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.830\tC\thypothetical protein, conserved\tLmjF12.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0370\tLmjF.12.0370\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.830\tC\thypothetical protein, conserved\tLmjF12.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0370\tLmjF.12.0370\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.830\tC\thypothetical protein, conserved\tLmjF12.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0380\tPUF4\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.820\tF\tpumillio protein 4, putative\tLmjF12.0380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0380\tPUF4\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.820\tC\tpumillio protein 4, putative\tLmjF12.0380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0410\tLmjF.12.0410\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3390\tC\tEukaryotic protein of unknown function (DUF866), putative\tLmjF12.0410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0410\tLmjF.12.0410\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3390\tC\tEukaryotic protein of unknown function (DUF866), putative\tLmjF12.0410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0410\tLmjF.12.0410\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3390\tC\tEukaryotic protein of unknown function (DUF866), putative\tLmjF12.0410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0430\tBDF6\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3400\tC\tBromodomain factor 6, putative\tLmjF12.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0430\tBDF6\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3400\tC\tBromodomain factor 6, putative\tLmjF12.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0430\tBDF6\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3400\tC\tBromodomain factor 6, putative\tLmjF12.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0440\tLmjF.12.0440\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3410\tC\thypothetical protein, conserved\tLmjF12.0440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0440\tLmjF.12.0440\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3410\tC\thypothetical protein, conserved\tLmjF12.0440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0520\tLmjF.12.0520\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3820\tC\tvacuolar ATP synthase subunit, putative\tLmjF12.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0520\tLmjF.12.0520\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3820\tC\tvacuolar ATP synthase subunit, putative\tLmjF12.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0520\tLmjF.12.0520\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3820\tP\tvacuolar ATP synthase subunit, putative\tLmjF12.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0520\tLmjF.12.0520\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3820\tC\tvacuolar ATP synthase subunit, putative\tLmjF12.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0530\tPGI\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3830\tC\tglucose-6-phosphate isomerase\tLmjF12.0530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0530\tPGI\t\tGO:0005829\tPMID:7870131\tISO\tGeneDB:LmxM.12.0530\tC\tglucose-6-phosphate isomerase\tLmjF12.0530\tmRNA\ttaxon:347515\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0530\tPGI\t\tGO:0020015\tPMID:7870131|GO_REF:0000024\tISO\tGeneDB:Tb927.1.3830|GeneDB:LmxM.12.0530\tC\tglucose-6-phosphate isomerase\tLmjF12.0530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0540\tPOMP18\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3800\tC\tPresent in the outer mitochondrial membrane proteome 18\tLmjF12.0540\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0570\tLmjF.12.0570\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3880\tC\tFusaric acid resistance protein-like, putative\tLmjF12.0570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0590\tLmjF.12.0590\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3880\tC\tFusaric acid resistance protein-like, putative\tLmjF12.0590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0620\tLmjF.12.0620\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3940\tC\thypothetical protein, conserved\tLmjF12.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0630\tALAT\t\tGO:0004021\tPMID:19443056|GO_REF:0000024\tISO\tGeneDB:Tb927.1.3950\tF\talanine aminotransferase\tLmjF12.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0630\tALAT\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.3950\tC\talanine aminotransferase\tLmjF12.0630\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0630\tALAT\t\tGO:0005829\tPMID:19443056|GO_REF:0000024\tISO\tGeneDB:Tb927.1.3950\tC\talanine aminotransferase\tLmjF12.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0630\tALAT\t\tGO:0006524\tPMID:19443056|GO_REF:0000024\tISO\tGeneDB:Tb927.1.3950\tP\talanine aminotransferase\tLmjF12.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0630\tALAT\t\tGO:0006560\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3950\tP\talanine aminotransferase\tLmjF12.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0630\tALAT\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.3950\tC\talanine aminotransferase\tLmjF12.0630\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0640\tLmjF.12.0640\t\tGO:0003896\tPMID:21257796|GO_REF:0000024\tISO\tGeneDB:Tb927.1.4010\tF\tprimase 2, putative\tLmjF12.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0640\tLmjF.12.0640\t\tGO:0005739\tPMID:21257796|GO_REF:0000024\tISO\tGeneDB:Tb927.1.4010\tC\tprimase 2, putative\tLmjF12.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0640\tLmjF.12.0640\t\tGO:0006260\tPMID:21257796|GO_REF:0000024\tISO\tGeneDB:Tb927.1.4010\tP\tprimase 2, putative\tLmjF12.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0640\tLmjF.12.0640\t\tGO:0016787\tPMID:21257796|GO_REF:0000024\tISO\tGeneDB:Tb927.1.4010\tF\tprimase 2, putative\tLmjF12.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0650\tLmjF.12.0650\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4040\tC\thypothetical protein, conserved\tLmjF12.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0660\tLmjF.12.0660\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4050\tC\tprotein phosphatase with EF-Hand domains (PPEF)\tLmjF12.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0660\tLmjF.12.0660\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4050\tC\tprotein phosphatase with EF-Hand domains (PPEF)\tLmjF12.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0670\tCOXIV\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4100\tC\tcytochrome oxidase subunit IV, putative\tLmjF12.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0670\tCOXIV\t\tGO:0005751\tPMID:12467979\tISO\tGeneDB:LtaP12.0690\tC\tcytochrome oxidase subunit IV, putative\tLmjF12.0670\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0680\tBBS5\t\tGO:0020018\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4140\tC\tBardet-Biedl syndrome 5 protein\tLmjF12.0680\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0680\tBBS5\t\tGO:0030665\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4140\tC\tBardet-Biedl syndrome 5 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0680\tBBS5\tNOT\tGO:0060271\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4140\tP\tBardet-Biedl syndrome 5 protein\tLmjF12.0680\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0680\tBBS5\tNOT\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4140\tP\tBardet-Biedl syndrome 5 protein\tLmjF12.0680\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0690\tLmjF.12.0690\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4160\tC\thypothetical protein, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1130\tNTR2\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:LdBPK_120730.1\tC\tActivating nitroreductase NTR2\tLmjF12.1130\tmRNA\ttaxon:347515\t20180524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1180\tLmjF.12.1180\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4410\tC\thypothetical protein, conserved\tLmjF12.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1190\tLmjF.12.1190\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4420\tC\tABC transporter, putative\tLmjF12.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1190\tLmjF.12.1190\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4420\tC\tABC transporter, putative\tLmjF12.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1220\tLmjF.12.1220\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4480\tC\tWD repeat and HMG-box DNA-binding protein, putative\tLmjF12.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1220\tLmjF.12.1220\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4480\tC\tWD repeat and HMG-box DNA-binding protein, putative\tLmjF12.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1220\tLmjF.12.1220\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4480\tC\tWD repeat and HMG-box DNA-binding protein, putative\tLmjF12.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1230\tLmjF.12.1230\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4500\tC\tSNARE associated Golgi protein, putative\tLmjF12.1230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1230\tLmjF.12.1230\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4500\tC\tSNARE associated Golgi protein, putative\tLmjF12.1230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1230\tLmjF.12.1230\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4500\tC\tSNARE associated Golgi protein, putative\tLmjF12.1230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1240\tLmjF.12.1240\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4520\tC\thypothetical protein, unknown function\tLmjF12.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1270\tLmjF.12.1270\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4690\tC\targinine N-methyltransferase-like protein\tLmjF12.1270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1270\tLmjF.12.1270\t\tGO:0016273\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4690\tF\targinine N-methyltransferase-like protein\tLmjF12.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1270\tLmjF.12.1270\t\tGO:0016274\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4690\tF\targinine N-methyltransferase-like protein\tLmjF12.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1270\tLmjF.12.1270\t\tGO:0019919\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4690\tP\targinine N-methyltransferase-like protein\tLmjF12.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1300\tLmjF.12.1300\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.4720\tC\tSET domain containing protein, putative\tLmjF12.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1305\tLmjF.12.1305\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4730\tC\thypothetical protein, conserved\tLmjF12.1305\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1310\tLmjF.12.1310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4740\tC\tFAM91 N-terminus/FAM91 C-terminus, putative\tLmjF12.1310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1320\tLmjF.12.1320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4760\tC\tVacuolar sorting protein 39 domain 1/Vacuolar sorting protein 39 domain 2, putative\tLmjF12.1320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1330\tLmjF.12.1330\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.4780\tC\tserine peptidase, Clan SC, Family S9D\tLmjF12.1330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0080\tPOLIB\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4690\tC\tmitochondrial DNA polymerase I protein B, putative\tLmjF13.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0080\tPOLIB\t\tGO:0006264\tPMID:20132449|GO_REF:0000024\tISO\tGeneDB:Tb927.11.4690|GeneDB:Tb11.02.2300\tP\tmitochondrial DNA polymerase I protein B, putative\tLmjF13.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0090\tCP1\t\tGO:0004181\tPMID:18539138\tIDA\t\tF\tmetallo-peptidase, Clan MA(E) Family M32\tLmjF13.0090\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0090\tCP1\t\tGO:0006508\tPMID:18539138\tIDA\t\tP\tmetallo-peptidase, Clan MA(E) Family M32\tLmjF13.0090\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0110\tLmjF.13.0110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4680\tC\tSURF1 family, putative\tLmjF13.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0120\tLmjF.13.0120\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4670\tP\thypothetical protein, conserved\tLmjF13.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0120\tLmjF.13.0120\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4670\tC\thypothetical protein, conserved\tLmjF13.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0130\tKIN13-2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4660\tC\tKinesin-13 2\tLmjF13.0130|Kif13-2\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0130\tKIN13-2\t\tGO:0005929\tPMID:17433682|GO_REF:0000024\tISO\tGeneDB:Tb927.11.4660\tC\tKinesin-13 2\tLmjF13.0130|Kif13-2\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0130\tKIN13-2\t\tGO:0008017\tPMID:17433682\tIMP\t\tF\tKinesin-13 2\tLmjF13.0130|Kif13-2\tmRNA\ttaxon:347515\t20141202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0130\tKIN13-2\t\tGO:0060271\tPMID:17433682\tIMP\t\tP\tKinesin-13 2\tLmjF13.0130|Kif13-2\tmRNA\ttaxon:347515\t20141202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0130\tKIN13-2\t\tGO:0060271\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4660\tP\tKinesin-13 2\tLmjF13.0130|Kif13-2\tmRNA\ttaxon:347515\t20141202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0130\tKIN13-2\t\tGO:0060404\tPMID:17433682\tIMP\t\tP\tKinesin-13 2\tLmjF13.0130|Kif13-2\tmRNA\ttaxon:347515\t20141202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0130\tKIN13-2\t\tGO:0061523\tPMID:17433682\tIMP\t\tP\tKinesin-13 2\tLmjF13.0130|Kif13-2\tmRNA\ttaxon:347515\t20141202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0130\tKIN13-2\t\tGO:0097542\tGO_REF:0000024\tISO\tGeneDB:LmxM.13.0130\tC\tKinesin-13 2\tLmjF13.0130|Kif13-2\tmRNA\ttaxon:347515\t20160718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0140\tLmjF.13.0140\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4650\tC\thypothetical protein, conserved\tLmjF13.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0160\tPKA-R\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4610\tC\tprotein kinase A regulatory subunit\tLmjF13.0160|FM458\tmRNA\ttaxon:347515\t20150420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0160\tPKA-R\t\tGO:0009372\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4610\tP\tprotein kinase A regulatory subunit\tLmjF13.0160|FM458\tmRNA\ttaxon:347515\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0160\tPKA-R\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4610\tP\tprotein kinase A regulatory subunit\tLmjF13.0160|FM458\tmRNA\ttaxon:347515\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0160\tPKA-R\t\tGO:0060294\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4610\tP\tprotein kinase A regulatory subunit\tLmjF13.0160|FM458\tmRNA\ttaxon:347515\t20150420\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0210\tLmjF.13.0210\t\tGO:0004806\tGO_REF:0000011\tISM\tInterPro:IPR002921\tF\tTriglyceride lipase, putative\tLmjF13.0210\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0210\tLmjF.13.0210\t\tGO:0006629\tGO_REF:0000011\tISM\tInterPro:IPR002921\tP\tTriglyceride lipase, putative\tLmjF13.0210\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0220\tRAB5B\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4570\tC\tras-related protein RAB5B, putative\tLmjF13.0220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0240\tLmjF.13.0240\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4550\tC\tDomain of unknown function (DUF4200), putative\tLmjF13.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0240\tLmjF.13.0240\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4550\tC\tDomain of unknown function (DUF4200), putative\tLmjF13.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0240\tLmjF.13.0240\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4550\tP\tDomain of unknown function (DUF4200), putative\tLmjF13.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0240\tLmjF.13.0240\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4550\tC\tDomain of unknown function (DUF4200), putative\tLmjF13.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0240\tLmjF.13.0240\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4550\tC\tDomain of unknown function (DUF4200), putative\tLmjF13.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0240\tLmjF.13.0240\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4550\tC\tDomain of unknown function (DUF4200), putative\tLmjF13.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0240\tLmjF.13.0240\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4550\tC\tDomain of unknown function (DUF4200), putative\tLmjF13.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0240\tLmjF.13.0240\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4550\tC\tDomain of unknown function (DUF4200), putative\tLmjF13.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0240\tLmjF.13.0240\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4550\tC\tDomain of unknown function (DUF4200), putative\tLmjF13.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0250\tNUP48\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4540\tC\tNucleoporin NUP48\tLmjF13.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0250\tNUP48\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4540\tC\tNucleoporin NUP48\tLmjF13.0250\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0260\tLmjF.13.0260\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4530\tC\tN-acetyltransferase subunit ARD1, putative\tLmjF13.0260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0260\tLmjF.13.0260\t\tGO:0016049\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4530\tP\tN-acetyltransferase subunit ARD1, putative\tLmjF13.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0270\tLmjF.13.0270\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4520\tC\thypothetical protein, conserved\tLmjF13.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0270\tLmjF.13.0270\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4520\tC\thypothetical protein, conserved\tLmjF13.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0270\tLmjF.13.0270\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4520\tC\thypothetical protein, conserved\tLmjF13.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0400\tLmjF.13.0400\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4510\tC\tSister chromatid cohesion C-terminus, putative\tLmjF13.0400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0410\tLmjF.13.0410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4500\tC\thypothetical protein, 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0420\tLmjF.13.0420\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4490\tC\tlong-chain-fatty-acid-CoA ligase, putative\tLmjF13.0420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0430\tRSP4/6\t\tGO:0001534\tGO_REF:0000012\tISS\tUniProtKB:Q01656\tC\tFlagellar radial spoke protein 4/6\tLmjF13.0430\tmRNA\ttaxon:347515\t20160316\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0450\tALBA1\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:LinJ.13.0270\tC\tALBA-domain protein 1\tLmjF13.0450|Alba13\tmRNA\ttaxon:347515\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0450\tALBA1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LinJ.13.0270\tC\tALBA-domain protein 1\tLmjF13.0450|Alba13\tmRNA\ttaxon:347515\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0450\tALBA1\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LinJ.13.0270\tC\tALBA-domain protein 1\tLmjF13.0450|Alba13\tmRNA\ttaxon:347515\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0450\tALBA1\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4450\tC\tALBA-domain protein 1\tLmjF13.0450|Alba13\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0450\tALBA1\t\tGO:0034605\tGO_REF:0000024\tISO\tGeneDB:LinJ.13.0270\tP\tALBA-domain protein 1\tLmjF13.0450|Alba13\tmRNA\ttaxon:347515\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0460\tLmjF.13.0460\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4420\tC\thypothetical protein, conserved\tLmjF13.0460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0480\tLmjF.13.0480\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4400\tC\tTATA element modulatory factor 1 TATA binding, putative\tLmjF13.0480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0560\tLmjF.13.0560\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4300\tC\t60S ribosomal protein L18, putative\tLmjF13.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0570\tLmjF.13.0570\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4290\tC\t40S ribosomal protein S12, putative\tLmjF13.0570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0570\tLmjF.13.0570\t\tGO:0005840\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4290\tC\t40S ribosomal protein S12, putative\tLmjF13.0570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0570\tLmjF.13.0570\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4290\tP\t40S ribosomal protein S12, putative\tLmjF13.0570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0600\tLmjF.13.0600\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4260\tC\tProtein of unknown function, DUF607, 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0630\tLmjF.13.0630\t\tGO:1990900\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4240\tC\thypothetical protein, conserved\tLmjF13.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0640\tLmjF.13.0640\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4230\tC\thypothetical protein, conserved\tLmjF13.0640\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0640\tLmjF.13.0640\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4230\tC\thypothetical protein, conserved\tLmjF13.0640\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0650\tPAT6\t\tGO:0006810\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.1710\tP\tpalmitoyl acyltransferase 6, putative\tLmjF13.0650\tmRNA\ttaxon:347515\t20110725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0650\tPAT6\t\tGO:0006897\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.1710\tP\tpalmitoyl acyltransferase 6, putative\tLmjF13.0650\tmRNA\ttaxon:347515\t20110725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0650\tPAT6\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 6, putative\tLmjF13.0650\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0650\tPAT6\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb11.02.1710\tP\tpalmitoyl acyltransferase 6, putative\tLmjF13.0650\tmRNA\ttaxon:347515\t20110725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0660\tLmjF.13.0660\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4210\tC\thypothetical protein, conserved\tLmjF13.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0660\tLmjF.13.0660\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4210\tC\thypothetical protein, conserved\tLmjF13.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0670\tLmjF.13.0670\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4200\tP\tmannose-specific lectin, putative\tLmjF13.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0680\tLmjF.13.0680\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4190\tC\tMetallopeptidase family M24, putative\tLmjF13.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0680\tLmjF.13.0680\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4190\tC\tMetallopeptidase family M24, putative\tLmjF13.0680\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0730\tLmjF.13.0730\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4130\tC\tubiquitin-like protein\tLmjF13.0730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0760\tLmjF.13.0760\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4160\tC\tC2 domain containing protein, putative\tLmjF13.0760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0800\tLmjF.13.0800\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4040\tC\thypothetical protein, conserved\tLmjF13.0800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0810\tLmjF.13.0810\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4030\tC\thypothetical protein, conserved\tLmjF13.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0810\tLmjF.13.0810\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4030\tC\thypothetical protein, conserved\tLmjF13.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0830\tLmjF.13.0830\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4010\tC\thypothetical protein, conserved\tLmjF13.0830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0830\tLmjF.13.0830\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4010\tC\thypothetical protein, conserved\tLmjF13.0830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0860\tLmjF.13.0860\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3990\tC\thypothetical protein, conserved\tLmjF13.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0870\tLmjF.13.0870\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3980\tC\tmitochondrial processing peptidase alpha subunit, putative\tLmjF13.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0880\tLmjF.13.0880\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF13.0880\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0880\tLmjF.13.0880\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3970\tC\thypothetical protein, conserved\tLmjF13.0880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0880\tLmjF.13.0880\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3970\tC\thypothetical protein, conserved\tLmjF13.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0890\tLmjF.13.0890\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3950\tC\thypothetical protein, conserved\tLmjF13.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0900\tLmjF.13.0900\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3930\tC\thypothetical protein, conserved\tLmjF13.0900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0900\tLmjF.13.0900\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3930\tC\thypothetical protein, conserved\tLmjF13.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0920\tLmjF.13.0920\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3910\tC\thypothetical protein, conserved\tLmjF13.0920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0930\tLmjF.13.0930\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3900\tC\tglycosyltransferase family-like protein\tLmjF13.0930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0930\tLmjF.13.0930\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3900\tC\tglycosyltransferase family-like protein\tLmjF13.0930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0930\tLmjF.13.0930\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3900\tC\tglycosyltransferase family-like protein\tLmjF13.0930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0940\tLmjF.13.0940\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3890\tC\tN(2), N(2)-dimethylguanosine tRNA methyltransferase, putative\tLmjF13.0940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0950\tLmjF.13.0950\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3880\tC\tactin-like protein, putative\tLmjF13.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0950\tLmjF.13.0950\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3880\tC\tactin-like protein, putative\tLmjF13.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0960\tLmjF.13.0960\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3870\tC\tkatanin-like protein\tLmjF13.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0960\tLmjF.13.0960\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3870\tC\tkatanin-like protein\tLmjF13.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0970\tLmjF.13.0970\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3860\tC\thypothetical protein, conserved\tLmjF13.0970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0970\tLmjF.13.0970\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3860\tC\thypothetical protein, conserved\tLmjF13.0970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0980\tLmjF.13.0980\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3850\tC\tAMP deaminase, putative\tLmjF13.0980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0990\tLmjF.13.0990\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3840\tC\thypothetical protein, conserved\tLmjF13.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1000\tLmjF.13.1000\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3830\tC\thypothetical protein, conserved\tLmjF13.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1000\tLmjF.13.1000\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3830\tC\thypothetical protein, conserved\tLmjF13.1000\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1030\tLmjF.13.1030\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3790\tC\thypothetical protein, conserved\tLmjF13.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1030\tLmjF.13.1030\t\tGO:0005643\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3790\tC\thypothetical protein, conserved\tLmjF13.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1030\tLmjF.13.1030\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3790\tC\thypothetical protein, conserved\tLmjF13.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1040\tLmjF.13.1040\t\tGO:0004252\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tF\tsubtilisin-like serine peptidase\tLmjF13.1040\tmRNA\ttaxon:347515\t20101007\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1040\tLmjF.13.1040\t\tGO:0016485\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tP\tsubtilisin-like 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1040\tLmjF.13.1040\t\tGO:2000377\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tP\tsubtilisin-like serine peptidase\tLmjF13.1040\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1090\tLmjF.13.1090\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3740\tC\tproteasome regulatory ATPase subunit 2, putative\tLmjF13.1090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1090\tLmjF.13.1090\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3740\tC\tproteasome regulatory ATPase subunit 2, putative\tLmjF13.1090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1090\tLmjF.13.1090\t\tGO:0005838\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3740\tC\tproteasome regulatory ATPase subunit 2, putative\tLmjF13.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1090\tLmjF.13.1090\t\tGO:0006511\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3740\tP\tproteasome regulatory ATPase subunit 2, putative\tLmjF13.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1110\tLmjF.13.1110\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3710\tC\thypothetical protein, conserved\tLmjF13.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1110\tLmjF.13.1110\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3710\tC\thypothetical protein, conserved\tLmjF13.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1120\tLmjF.13.1120\t\tGO:0003677\tPMID:16730080\tISO\tGeneDB:Tb927.3.1250\tF\tDNA-directed RNA polymerase I subunit, putative\tLmjF13.1120\tmRNA\ttaxon:347515\t20110414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1120\tLmjF.13.1120\t\tGO:0003899\tPMID:16730080\tISO\tGeneDB:Tb927.3.1250\tF\tDNA-directed RNA polymerase I subunit, putative\tLmjF13.1120\tmRNA\ttaxon:347515\t20110414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1120\tLmjF.13.1120\t\tGO:0006351\tPMID:16730080\tISO\tGeneDB:Tb927.3.1250\tP\tDNA-directed RNA polymerase I subunit, putative\tLmjF13.1120\tmRNA\ttaxon:347515\t20110414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1130\tLmjF.13.1130\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3700\tC\tUncharacterised ACR, YagE family COG1723, putative\tLmjF13.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1130\tLmjF.13.1130\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3700\tC\tUncharacterised ACR, YagE family COG1723, putative\tLmjF13.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1130\tLmjF.13.1130\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3700\tP\tUncharacterised ACR, YagE family COG1723, putative\tLmjF13.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1150\tLmjF.13.1150\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3940\tC\thypothetical protein, conserved\tLmjF13.1150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1160\tLmjF.13.1160\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3680\tC\tcalmodulin, putative\tLmjF13.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1170\tLmjF.13.1170\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3670\tC\thypothetical protein, conserved\tLmjF13.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1190\tLmjF.13.1190\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3650\tC\tadenylosuccinate 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1190\tLmjF.13.1190\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3650\tC\tadenylosuccinate synthetase, putative\tLmjF13.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1200\tLmjF.13.1200\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3640\tC\thypothetical protein, conserved\tLmjF13.1200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1200\tLmjF.13.1200\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3640\tC\thypothetical protein, conserved\tLmjF13.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1210\tNT3\t\tGO:0015205\tPMID:15478805\tIDA\t\tF\tnucleobase transporter\tLmjF13.1210\tmRNA\ttaxon:347515\t20090604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1210\tNT3\t\tGO:0015851\tPMID:15478805\tIDA\t\tP\tnucleobase transporter\tLmjF13.1210\tmRNA\ttaxon:347515\t20090604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1220\tLmjF.13.1220\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3600\tC\t40S ribosomal protein S4, putative\tLmjF13.1220\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1220\tLmjF.13.1220\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3600\tC\t40S ribosomal protein S4, putative\tLmjF13.1220\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1230\tLmjF.13.1230\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3600\tC\t40S ribosomal protein S4, putative\tLmjF13.1230\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1230\tLmjF.13.1230\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3600\tC\t40S ribosomal protein S4, putative\tLmjF13.1230\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1240\tLmjF.13.1240\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3580\tC\tThiamin pyrophosphokinase, vitamin B1 binding domain containing protein, putative\tLmjF13.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1300\tLmjF.13.1300\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3530\tC\tComplex 1 protein (LYR family), putative\tLmjF13.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1300\tLmjF.13.1300\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3530\tC\tComplex 1 protein (LYR family), putative\tLmjF13.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1300\tLmjF.13.1300\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3530\tC\tComplex 1 protein (LYR family), putative\tLmjF13.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1360\tLmjF.13.1360\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3490\tF\thypothetical protein, conserved\tLmjF13.1360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1370\tLmjF.13.1370\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3480\tC\tSin-like protein conserved region, putative\tLmjF13.1370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1370\tLmjF.13.1370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3480\tC\tSin-like protein conserved region, putative\tLmjF13.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1440\tLmjF.13.1440\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3410\tC\thypothetical protein, 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RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1520\tLmjF.13.1520\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3360\tC\tATPase family associated with various cellular activities (AAA), putative\tLmjF13.1520\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1520\tLmjF.13.1520\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3360\tP\tATPase family associated with various cellular activities (AAA), putative\tLmjF13.1520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1530\tLmjF.13.1530\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3350\tC\tphospholipid-transporting ATPase 1-like protein\tLmjF13.1530\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1590\tSAS-4\t\tGO:0007105\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3300\tP\tSpindle assembly abnormal 4\tLmjF13.1590|CENPJ\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1590\tSAS-4\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3300\tP\tSpindle assembly abnormal 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1610\tKIN13-5\t\tGO:0005623\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3280\tC\tKinesin-13 5, putative\tLmjF13.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1610\tKIN13-5\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3280\tC\tKinesin-13 5, putative\tLmjF13.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1610\tKIN13-5\t\tGO:0051286\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3280\tC\tKinesin-13 5, putative\tLmjF13.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1620\tLmjF.13.1620\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3270\tC\tsqualene monooxygenase-like protein\tLmjF13.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1620\tLmjF.13.1620\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3270\tC\tsqualene monooxygenase-like protein\tLmjF13.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1630\tLmjF.13.1630\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3260\tC\tmitochondrial DNA polymerase I protein D, putative\tLmjF13.1630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1650\tLmjF.13.1650\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3250\tC\tdynein heavy chain, putative\tLmjF13.1650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1650\tLmjF.13.1650\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3250\tC\tdynein heavy chain, putative\tLmjF13.1650\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1660\tLmjF.13.1660\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3240\tC\tchaperonin TCP20, putative\tLmjF13.1660\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1690\tLmjF.13.1690\t\tGO:0005886\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tC\tProtein Associated with Differentiation, putative\tLmjF13.1690\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1690\tLmjF.13.1690\t\tGO:0009266\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tP\tProtein Associated with Differentiation, putative\tLmjF13.1690\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1690\tLmjF.13.1690\t\tGO:0009986\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tC\tProtein Associated with Differentiation, putative\tLmjF13.1690\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1690\tLmjF.13.1690\t\tGO:0015746\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tP\tProtein Associated with Differentiation, putative\tLmjF13.1690\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1690\tLmjF.13.1690\t\tGO:0050793\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.5930|GeneDB:Tb927.7.5940\tP\tProtein Associated with Differentiation, putative\tLmjF13.1690\tmRNA\ttaxon:347515\t20130902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0010\tLmjF.14.0010\t\tGO:0000175\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4670\tF\texosome complex exonuclease, putative\tLmjF14.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0010\tLmjF.14.0010\t\tGO:0000176\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4670\tC\texosome complex exonuclease, putative\tLmjF14.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0010\tLmjF.14.0010\t\tGO:0000177\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4670\tC\texosome complex exonuclease, 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0010\tLmjF.14.0010\t\tGO:0006364\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4670\tP\texosome complex exonuclease, putative\tLmjF14.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0010\tLmjF.14.0010\t\tGO:0016049\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4670\tP\texosome complex exonuclease, putative\tLmjF14.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0040\tJBP2\t\tGO:0005634\tGO_REF:0000024\tISO\tUniProtKB:B6EU02\tC\tJ Biosynthesis Protein 2\tLmjF14.0040\tmRNA\ttaxon:347515\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0040\tJBP2\t\tGO:0008198\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13640\tF\tJ Biosynthesis Protein 2\tLmjF14.0040\tmRNA\ttaxon:347515\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0040\tJBP2\t\tGO:0050341\tGO_REF:0000024\tISO\tUniProtKB:B6EU02\tF\tJ Biosynthesis Protein 2\tLmjF14.0040\tmRNA\ttaxon:347515\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0040\tJBP2\t\tGO:0070580\tGO_REF:0000024\tISO\tUniProtKB:B6EU02\tP\tJ Biosynthesis Protein 2\tLmjF14.0040\tmRNA\ttaxon:347515\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0050\tLmjF.14.0050\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\tLmjF14.0050\tmRNA\ttaxon:347515\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0100\tLmjF.14.0100\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4600\tC\thypothetical protein, conserved\tLmjF14.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0100\tLmjF.14.0100\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4600\tC\thypothetical protein, conserved\tLmjF14.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0120\tLmjF.14.0120\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4580\tC\thypothetical protein, conserved\tLmjF14.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0120\tLmjF.14.0120\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4580\tC\thypothetical protein, conserved\tLmjF14.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0130\tIG-NH\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4570\tC\tinosine-guanine nucleoside hydrolase, putative\tLmjF14.0130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0130\tIG-NH\t\tGO:0006179\tPMID:20825170|GO_REF:0000024\tISO\tGeneDB:Tb927.7.4570\tP\tinosine-guanine nucleoside hydrolase, putative\tLmjF14.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0130\tIG-NH\t\tGO:0006190\tPMID:20825170|GO_REF:0000024\tISO\tGeneDB:Tb927.7.4570|GeneDB:Tb927.7.4570GeneDB:Tb927.7.4570\tP\tinosine-guanine nucleoside hydrolase, putative\tLmjF14.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0130\tIG-NH\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4570\tC\tinosine-guanine 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RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0150\tLmjF.14.0150\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4550\tC\t60S ribosomal protein, putative\tLmjF14.0150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0160\tLmjF.14.0160\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4540\tC\thypothetical protein, conserved\tLmjF14.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0190\tLmjF.14.0190\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4520\tC\tThioredoxin-like, putative\tLmjF14.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0190\tLmjF.14.0190\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4520\tC\tThioredoxin-like, putative\tLmjF14.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0190\tLmjF.14.0190\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4520\tP\tThioredoxin-like, putative\tLmjF14.0190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0190\tLmjF.14.0190\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4520\tC\tThioredoxin-like, putative\tLmjF14.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0200\tBBS18\t\tGO:0020018\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4515\tC\tBardet-Biedl syndrome 18 protein\tLmjF14.0200\tmRNA\ttaxon:347515\t20160718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0200\tBBS18\t\tGO:0030665\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4515\tC\tBardet-Biedl syndrome 18 protein\tLmjF14.0200\tmRNA\ttaxon:347515\t20160718\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0200\tBBS18\t\tGO:0034464\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4515\tC\tBardet-Biedl syndrome 18 protein\tLmjF14.0200\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0210\tLmjF.14.0210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4510\tC\tDomain of unknown function (DUF4201), putative\tLmjF14.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0210\tLmjF.14.0210\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4510\tC\tDomain of unknown function (DUF4201), putative\tLmjF14.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0220\tLmjF.14.0220\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4500\tP\tPX domain containing protein, putative\tLmjF14.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0250\tLmjF.14.0250\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4470\tC\thypothetical protein, conserved\tLmjF14.0250\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0260\tLmjF.14.0260\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4460\tC\tvon Willebrand factor type A domain containing protein, putative\tLmjF14.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0280\tNuSAP3\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4450\tC\tNucleus and spindle associated protein 3, 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0300\tLmjF.14.0300\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4430\tP\thypothetical protein, conserved\tLmjF14.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0310\tLmjF.14.0310\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4420\tC\tproteasome alpha 3 subunit, putative\tLmjF14.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0310\tLmjF.14.0310\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4420\tC\tproteasome alpha 3 subunit, putative\tLmjF14.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0310\tLmjF.14.0310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4420\tC\tproteasome alpha 3 subunit, putative\tLmjF14.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0320\tAAT21\t\tGO:0005886\tPMID:15632173\tIDA\t\tC\tamino acid permease, putative\tLmjF14.0320|POT1\tmRNA\ttaxon:347515\t20150227\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0320\tAAT21\t\tGO:0015489\tPMID:15632173\tIDA\t\tF\tamino acid permease, putative\tLmjF14.0320|POT1\tmRNA\ttaxon:347515\t20150302\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0320\tAAT21\t\tGO:0015606\tPMID:15632173\tIDA\t\tF\tamino acid permease, putative\tLmjF14.0320|POT1\tmRNA\ttaxon:347515\t20150302\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0320\tAAT21\t\tGO:0015847\tPMID:15632173\tIDA\t\tP\tamino acid permease, putative\tLmjF14.0320|POT1\tmRNA\ttaxon:347515\t20150302\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0320\tAAT21\t\tGO:1903710\tPMID:15632173\tIDA\t\tP\tamino acid permease, putative\tLmjF14.0320|POT1\tmRNA\ttaxon:347515\t20150302\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0340\tLmjF.14.0340\t\tGO:0000827\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4400\tF\tinositol polyphosphate kinase-like protein, putative\tLmjF14.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0340\tLmjF.14.0340\t\tGO:0000828\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4400\tF\tinositol polyphosphate kinase-like protein, putative\tLmjF14.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0340\tLmjF.14.0340\t\tGO:0052746\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4400\tP\tinositol polyphosphate kinase-like protein, putative\tLmjF14.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0350\tLmjF.14.0350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4390\tC\tthreonine synthase, putative\tLmjF14.0350\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0350\tLmjF.14.0350\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4390\tC\tthreonine synthase, putative\tLmjF14.0350\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0410\tLmjF.14.0410\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4340\tC\tProtein of unknown function (DUF1253), 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0420\tLmjF.14.0420\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4330\tC\tIguana/Dzip1-like DAZ-interacting protein N-terminal, putative\tLmjF14.0420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0420\tLmjF.14.0420\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4330\tC\tIguana/Dzip1-like DAZ-interacting protein N-terminal, putative\tLmjF14.0420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0800\tLmjF.14.0800\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4120\tP\thypothetical protein, conserved\tLmjF14.0800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0820\tLmjF.14.0820\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4100\tC\tDomain of unknown function (DUF4201), putative\tLmjF14.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0820\tLmjF.14.0820\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4100\tC\tDomain 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"TriTrypDB\tLmjF.14.0850\tSMP-3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4060\tC\tsmall myristoylated protein-3, putative\tLmjF14.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0850\tSMP-3\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4060\tC\tsmall myristoylated protein-3, putative\tLmjF14.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0850\tSMP-3\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4060\tC\tsmall myristoylated protein-3, putative\tLmjF14.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0850\tSMP-3\t\tGO:0097542\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4060\tC\tsmall myristoylated protein-3, putative\tLmjF14.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0890\tLmjF.14.0890\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4030\tC\thypothetical protein, conserved\tLmjF14.0890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0900\tLmjF.14.0900\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4020\tC\tprotein phosphatase 2C-like protein\tLmjF14.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0900\tLmjF.14.0900\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4020\tC\tprotein phosphatase 2C-like protein\tLmjF14.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0910\tLmjF.14.0910\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4000\tC\tglutathione synthetase, putative\tLmjF14.0910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0910\tLmjF.14.0910\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.4000\tC\tglutathione synthetase, putative\tLmjF14.0910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0920\tPOLIC\t\tGO:0006264\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3990\tP\tmitochondrial DNA polymerase I protein C\tLmjF14.0920\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0920\tPOLIC\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3990\tC\tmitochondrial DNA polymerase I protein C\tLmjF14.0920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0920\tPOLIC\t\tGO:0042645\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3990\tC\tmitochondrial DNA polymerase I protein C\tLmjF14.0920\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0930\tLmjF.14.0930\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3980\tF\ttc40 antigen-like\tLmjF14.0930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0930\tLmjF.14.0930\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3980\tC\ttc40 antigen-like\tLmjF14.0930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0930\tLmjF.14.0930\t\tGO:0020022\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3980\tC\ttc40 antigen-like\tLmjF14.0930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0930\tLmjF.14.0930\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3980\tC\ttc40 antigen-like\tLmjF14.0930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0950\tLmjF.14.0950\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3960\tC\tRibosomal protein L16p/L10e, putative\tLmjF14.0950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0950\tLmjF.14.0950\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3960\tC\tRibosomal protein L16p/L10e, putative\tLmjF14.0950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0960\t3'TUTASE\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3950\tC\tRNA editing 3' terminal uridylyl transferase 1\tLmjF14.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0960\t3'TUTASE\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3950\tC\tRNA editing 3' terminal uridylyl transferase 1\tLmjF14.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0960\t3'TUTASE\t\tGO:0050265\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3950\tF\tRNA editing 3' terminal uridylyl transferase 1\tLmjF14.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0980\tFTP\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.840.1\tC\tsodium/hydrogen exchanger, putative\tLmjF14.0980\tmRNA\ttaxon:347515\t20150218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0990\tLmjF.14.0990\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3940\tC\tADP/ATP mitochondrial carrier-like protein\tLmjF14.0990\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1030\tLmjF.14.1030\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3910\tC\thypothetical protein, conserved\tLmjF14.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1030\tLmjF.14.1030\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3910\tC\thypothetical protein, conserved\tLmjF14.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1040\tLmjF.14.1040\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3900\tP\tDomain of unknown function (DUF202), putative\tLmjF14.1040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1040\tLmjF.14.1040\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3900\tC\tDomain of unknown function (DUF202), putative\tLmjF14.1040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1070\tLmjF.14.1070\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3880\tC\tCMGC/DYRK protein kinase, putative\tLmjF14.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1100\tLmjF.14.1100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3830\tC\tkinesin K39, putative\tLmjF14.1100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1110\tLmjF.14.1110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3830\tC\tkinesin K39, putative\tLmjF14.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1120\tLmjF.14.1120\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3830\tC\tkinesin K39, putative\tLmjF14.1120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1140\tLmjF.14.1140\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3810\tF\thypothetical protein, conserved\tLmjF14.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1140\tLmjF.14.1140\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3810\tC\thypothetical protein, conserved\tLmjF14.1140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1160\tENO\t\tGO:0000287\tGO_REF:0000024\tISO\tGeneDB:LmxM.14.1160\tF\tenolase\tLmjF14.1160\tmRNA\ttaxon:347515\t20160628\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1160\tENO\t\tGO:0004634\tGO_REF:0000024\tISO\tGeneDB:LmxM.14.1160\tF\tenolase\tLmjF14.1160\tmRNA\ttaxon:347515\t20160628\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1160\tENO\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:LmxM.14.1160\tC\tenolase\tLmjF14.1160\tmRNA\ttaxon:347515\t20160628\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1160\tENO\t\tGO:0009897\tGO_REF:0000024\tISO\tGeneDB:LmxM.14.1160\tC\tenolase\tLmjF14.1160\tmRNA\ttaxon:347515\t20160628\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1170\tLmjF.14.1170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3790\tC\tras-like small GTPases, putative\tLmjF14.1170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1170\tLmjF.14.1170\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3790\tC\tras-like small GTPases, putative\tLmjF14.1170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1170\tLmjF.14.1170\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3790\tC\tras-like small GTPases, putative\tLmjF14.1170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1180\tLmjF.14.1180\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3780\tC\tpoly(A) polymerase, putative\tLmjF14.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1180\tLmjF.14.1180\t\tGO:0006378\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3780\tP\tpoly(A) polymerase, putative\tLmjF14.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1180\tLmjF.14.1180\t\tGO:0071050\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3780\tP\tpoly(A) polymerase, putative\tLmjF14.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1190\tnnr\t\tGO:0005739\tPMID:20660476\tRCA\t\tC\tBifunctional NAD(P)H-hydrate repair enzyme\tLmjF14.1190|yjeF\tmRNA\ttaxon:347515\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1190\tnnr\t\tGO:0052855\tGO_REF:0000012\tISA\tUniProtKB:P31806\tF\tBifunctional NAD(P)H-hydrate repair enzyme\tLmjF14.1190|yjeF\tmRNA\ttaxon:347515\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1190\tnnr\t\tGO:0052856\tGO_REF:0000012\tISA\tUniProtKB:P31806\tF\tBifunctional NAD(P)H-hydrate repair enzyme\tLmjF14.1190|yjeF\tmRNA\ttaxon:347515\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1190\tnnr\t\tGO:0052857\tGO_REF:0000012\tISA\tUniProtKB:P31806\tF\tBifunctional NAD(P)H-hydrate repair enzyme\tLmjF14.1190|yjeF\tmRNA\ttaxon:347515\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1200\tLmjF.14.1200\t\tGO:0003882\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3760\tF\tphosphatidylserine synthase, putative\tLmjF14.1200\tmRNA\ttaxon:347515\t20100812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1200\tLmjF.14.1200\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3760\tC\tphosphatidylserine synthase, putative\tLmjF14.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1220\tLmjF.14.1220\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3740\tC\thypothetical protein, conserved\tLmjF14.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1220\tLmjF.14.1220\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3740\tC\thypothetical protein, conserved\tLmjF14.1220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1220\tLmjF.14.1220\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3740\tP\thypothetical protein, conserved\tLmjF14.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1240\tLmjF.14.1240\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3700\tC\thypothetical protein, conserved\tLmjF14.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1310\tLmjF.14.1310\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3640\tC\thypothetical protein, conserved\tLmjF14.1310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1320\tSHMT-S\t\tGO:0005829\tPMID:16876889\tEXP\t\tC\tserine hydroxymethyltranferase (SHMT-S)\tLmjF14.1320\tmRNA\ttaxon:347515\t20090911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1360\tINO1\t\tGO:0004512\tPMID:20382188\tISO\tGeneDB:Tb927.10.7110\tF\tinositol-3-phosphate synthase\tLmjF14.1360\tmRNA\ttaxon:347515\t20100812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1360\tINO1\t\tGO:0006020\tGO_REF:0000002\tISS\t\tP\tinositol-3-phosphate synthase\tLmjF14.1360\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1370\tTyrS\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3620\tC\ttyrosyl-tRNA synthetase, putative\tLmjF14.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1370\tTyrS\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3620\tC\ttyrosyl-tRNA synthetase, putative\tLmjF14.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1370\tTyrS\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3620\tC\ttyrosyl-tRNA synthetase, putative\tLmjF14.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1370\tTyrS\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3620\tC\ttyrosyl-tRNA synthetase, putative\tLmjF14.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1370\tTyrS\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3620\tC\ttyrosyl-tRNA synthetase, putative\tLmjF14.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1370\tTyrS\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3620\tC\ttyrosyl-tRNA synthetase, putative\tLmjF14.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1395\tLmjF.14.1395\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3590\tC\thypothetical protein, conserved\tLmjF14.1395\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1420\tLmjF.14.1420\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3570\tC\thypothetical protein, conserved\tLmjF14.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1430\tLmjF.14.1430\t\tGO:0016607\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3560\tC\thypothetical protein, conserved\tLmjF14.1430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1430\tLmjF.14.1430\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3560\tP\thypothetical protein, conserved\tLmjF14.1430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1440\tLmjF.14.1440\t\tGO:0000902\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3550\tP\tcytoskeleton associated protein, putative\tLmjF14.1440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1440\tLmjF.14.1440\t\tGO:0000910\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3550\tP\tcytoskeleton associated protein, putative\tLmjF14.1440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1440\tLmjF.14.1440\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3550\tC\tcytoskeleton associated protein, putative\tLmjF14.1440\tmRNA\ttaxon:347515\t20151209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1440\tLmjF.14.1440\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3550\tP\tcytoskeleton associated protein, putative\tLmjF14.1440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1440\tLmjF.14.1440\t\tGO:0030863\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3550\tC\tcytoskeleton associated protein, putative\tLmjF14.1440\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1450\tLmjF.14.1450\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3530\tC\tVacuolar 14 Fab1-binding region/Vacuolar protein 14 C-terminal Fig4p binding, putative\tLmjF14.1450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1460\tMPC2\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3520\tC\tMitochondrial pyruvate carrier 2\tLmjF14.1460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1460\tMPC2\t\tGO:0031966\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3520\tC\tMitochondrial pyruvate carrier 2\tLmjF14.1460\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1460\tMPC2\t\tGO:1902361\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3520\tP\tMitochondrial pyruvate carrier 2\tLmjF14.1460\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1470\tLmjF.14.1470\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3510\tC\thypothetical protein, conserved\tLmjF14.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1480\tLmjF.14.1480\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3500\tC\tglutathione-S-transferase/glutaredoxin, putative\tLmjF14.1480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1480\tLmjF.14.1480\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3500\tC\tglutathione-S-transferase/glutaredoxin, putative\tLmjF14.1480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0030\tLmjF.15.0030\t\tGO:0009897\tPMID:19961654\tISO\tGeneDB:LbrM.15.0030\tC\tATP diphosphohydrolase\tLmjF15.0030\tmRNA\ttaxon:347515\t20091230\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0030\tLmjF.15.0030\t\tGO:0032473\tPMID:19961654\tISO\tGeneDB:LbrM.15.0030\tC\tATP diphosphohydrolase\tLmjF15.0030\tmRNA\ttaxon:347515\t20091230\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0030\tLmjF.15.0030\t\tGO:0047693\tPMID:19961654\tISO\tGeneDB:LbrM.15.0030\tF\tATP diphosphohydrolase\tLmjF15.0030\tmRNA\ttaxon:347515\t20091230\tGeneDB\t\t", "type": "Invalid 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RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0160\tLmjF.15.0160\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger (CCCH type) protein, putative\tLmjF15.0160\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0160\tLmjF.15.0160\t\tGO:0005829\tPMID:22366391\tISO\tGeneDB:Tb927.5.1580\tC\tzinc finger (CCCH type) protein, putative\tLmjF15.0160\tmRNA\ttaxon:347515\t20120320\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0170\tLmjF.15.0170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1660\tC\tprotein phosphatase 2C, putative\tLmjF15.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0200\tLmjF.15.0200\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1610\tC\t60S ribosomal protein L13a, putative\tLmjF15.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0200\tLmjF.15.0200\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1610\tC\t60S ribosomal protein L13a, putative\tLmjF15.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0210\tLmjF.15.0210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1600\tC\thypothetical protein, conserved\tLmjF15.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0210\tLmjF.15.0210\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1600\tP\thypothetical protein, conserved\tLmjF15.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0225\tLmjF.15.0225\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1670\tC\tWD domain, G-beta repeat, putative\tLmjF15.0225\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0225\tLmjF.15.0225\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1670\tC\tWD domain, G-beta repeat, putative\tLmjF15.0225\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0250\tLmjF.15.0250\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1680\tC\thypothetical protein, conserved\tLmjF15.0250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0260\tLmjF.15.0260\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1690\tC\thypothetical protein, conserved\tLmjF15.0260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0260\tLmjF.15.0260\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1690\tC\thypothetical protein, conserved\tLmjF15.0260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0270\tLmjF.15.0270\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1700\tC\treplication Factor A 28 kDa subunit, putative\tLmjF15.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0280\tLmjF.15.0280\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1710\tC\tribonucleoprotein p18, mitochondrial precursor, putative\tLmjF15.0280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0320\tLmjF.15.0320\t\tGO:0016787\tGO_REF:0000002\tISM\tInterPro:IPR013094\tF\tIsoprenylcysteine alpha-carbonyl methylesterase, putative\tLmjF15.0320\tmRNA\ttaxon:347515\t20141107\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0400\tLmjF.15.0400\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1780\tC\thypothetical protein, conserved\tLmjF15.0400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0410\tLmjF.15.0410\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1790\tC\thypothetical protein, conserved\tLmjF15.0410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0410\tLmjF.15.0410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1790\tC\thypothetical protein, conserved\tLmjF15.0410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0410\tLmjF.15.0410\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1790\tC\thypothetical protein, conserved\tLmjF15.0410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0500\tLmjF.15.0500\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1870\tC\tmetalloprotease, putative\tLmjF15.0500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0500\tLmjF.15.0500\t\tGO:0005819\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1870\tC\tmetalloprotease, putative\tLmjF15.0500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0510\tISP2\t\tGO:0042784\tPMID:21098233\tIMP\t\tP\tecotin, putative\tLmjF15.0510\tmRNA\ttaxon:347515\t20110418\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0510\tISP2\t\tGO:0052190\tPMID:21098233\tIMP\t\tP\tecotin, putative\tLmjF15.0510\tmRNA\ttaxon:347515\t20110418\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0520\tISP3\t\tGO:0042784\tPMID:19016791\tIMP\t\tP\tecotin, putative\tLmjF15.0520\tmRNA\ttaxon:347515\t20110418\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0520\tISP3\t\tGO:0052190\tPMID:19016791\tIMP\t\tP\tecotin, putative\tLmjF15.0520\tmRNA\ttaxon:347515\t20110418\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0560\tLmjF.15.0560\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1920\tP\thypothetical protein, conserved\tLmjF15.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0590\tLmjF.15.0590\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1940\tC\thypothetical protein, conserved\tLmjF15.0590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0590\tLmjF.15.0590\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1940\tC\thypothetical protein, conserved\tLmjF15.0590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0670\tLmjF.15.0670\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6580\tC\thypothetical protein, conserved\tLmjF15.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0680\tLmjF.15.0680\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6620\tC\thypothetical protein, conserved\tLmjF15.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0690\tLmjF.15.0690\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.6650\tC\thypothetical protein, conserved\tLmjF15.0690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0710\tLmjF.15.0710\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6670\tC\thypothetical protein, conserved\tLmjF15.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0720\tLmjF.15.0720\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6710\tC\tflavoprotein monooxygenase, putative\tLmjF15.0720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0720\tLmjF.15.0720\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6710\tC\tflavoprotein monooxygenase, putative\tLmjF15.0720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0770\tLmjF.15.0770\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6560\tC\tNAK family pseudokinase, putative\tLmjF15.0770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0770\tLmjF.15.0770\t\tGO:0051286\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6560\tC\tNAK family pseudokinase, putative\tLmjF15.0770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0770\tLmjF.15.0770\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6560\tC\tNAK family pseudokinase, putative\tLmjF15.0770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0780\tLmjF.15.0780\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6510\tC\thypothetical protein, conserved\tLmjF15.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0780\tLmjF.15.0780\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6510\tC\thypothetical protein, conserved\tLmjF15.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0800\tLmjF.15.0800\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6460\tC\thypothetical protein, conserved\tLmjF15.0800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0800\tLmjF.15.0800\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.6460\tC\thypothetical protein, conserved\tLmjF15.0800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0810\tLmjF.15.0810\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.6450\tC\tperoxisomal membrane protein (Pex16), putative\tLmjF15.0810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0815\tLmjF.15.0815\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6440\tC\tdolichol phosphate-mannose biosynthesis regulatory protein (DPM2), putative\tLmjF15.0815\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0815\tLmjF.15.0815\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6440\tC\tdolichol phosphate-mannose biosynthesis regulatory protein (DPM2), putative\tLmjF15.0815\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0890\tABCG4\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.6310\tC\tATP-binding cassette protein subfamily G, member 4, putative\tLmjF15.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0890\tABCG4\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tATP-binding cassette protein subfamily G, member 4, putative\tLmjF15.0890\tmRNA\ttaxon:347515\t20090608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0930\tLmjF.15.0930\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6130\tC\tcalmodulin-like protein\tLmjF15.0930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0930\tLmjF.15.0930\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6130\tC\tcalmodulin-like protein\tLmjF15.0930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0940\tNuSAP2\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6110\tC\tNucleus and spindle associated protein 2, putative\tLmjF15.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0940\tNuSAP2\t\tGO:0005819\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6110\tC\tNucleus and spindle associated protein 2, putative\tLmjF15.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0950\tLmjF.15.0950\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6070\tF\t40S ribosomal protein S3, putative\tLmjF15.0950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0950\tLmjF.15.0950\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.6070\tC\t40S ribosomal protein S3, putative\tLmjF15.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0960\tPOMP4\t\tGO:0005741\tPMID:23221899|GO_REF:0000024\tISO\tGeneDB:Tb927.9.6060\tC\tPresent in the outer mitochondrial membrane proteome 4\tLmjF15.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0960\tPOMP4\t\tGO:0005758\tGO_REF:0000012\tISA\tUniProtKB:ERV1_YEAST\tC\tPresent in the outer mitochondrial membrane proteome 4\tLmjF15.0960\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0960\tPOMP4\t\tGO:0016972\tGO_REF:0000012\tISA\tUniProtKB:ERV1_YEAST\tF\tPresent in the outer mitochondrial membrane proteome 4\tLmjF15.0960\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0960\tPOMP4\t\tGO:0045041\tGO_REF:0000012\tISA\tUniProtKB:ERV1_YEAST\tP\tPresent in the outer mitochondrial membrane proteome 4\tLmjF15.0960\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0970\tUBA5\t\tGO:0005739\tPMID:21264253\tISO\tGeneDB:LinJ.15.1030\tC\tE1-like ubiquitin-activating enzyme, putative\tLmjF15.0970\tmRNA\ttaxon:347515\t20110201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0970\tUBA5\t\tGO:0008641\tPMID:21264253\tISO\tGeneDB:LinJ.15.1030\tF\tE1-like ubiquitin-activating enzyme, putative\tLmjF15.0970\tmRNA\ttaxon:347515\t20110201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0970\tUBA5\t\tGO:0032182\tPMID:21264253\tISO\tGeneDB:LinJ.15.1030\tF\tE1-like ubiquitin-activating enzyme, putative\tLmjF15.0970\tmRNA\ttaxon:347515\t20110201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0980\tRAD9\t\tGO:0005634\tPMID:24118609\tIDA\t\tC\tDNA repair protein Rad9, putative\tLmjF15.0980\tmRNA\ttaxon:347515\t20150526\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0980\tRAD9\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6010\tC\tDNA repair protein Rad9, putative\tLmjF15.0980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0980\tRAD9\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6010\tC\tDNA repair protein Rad9, putative\tLmjF15.0980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0980\tRAD9\t\tGO:0006260\tPMID:32897188\tIMP\t\tP\tDNA repair protein Rad9, putative\tLmjF15.0980\tmRNA\ttaxon:347515\t20210129\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0980\tRAD9\t\tGO:0006974\tPMID:24118609\tIMP\t\tP\tDNA repair protein Rad9, putative\tLmjF15.0980\tmRNA\ttaxon:347515\t20150526\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0980\tRAD9\t\tGO:0030896\tPMID:24118609\tIPI\tGeneDB:LmjF.23.0290\tC\tDNA repair protein Rad9, putative\tLmjF15.0980\tmRNA\ttaxon:347515\t20150526\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0990\tLmjF.15.0990\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5960\tC\tsuccinate dehydrogenase, putative\tLmjF15.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1010\tGDH\t\tGO:0004352\tPMID:9199326|PMID:19497128\tIDA\t\tF\tglutamate dehydrogenase\tLmjF15.1010\tmRNA\ttaxon:347515\t20090803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1010\tGDH\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5900\tC\tglutamate dehydrogenase\tLmjF15.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1010\tGDH\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5900\tC\tglutamate dehydrogenase\tLmjF15.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1020\tLmjF.15.1020\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5890\tC\tsolanesyl-diphosphate synthase, putative\tLmjF15.1020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1020\tLmjF.15.1020\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5890\tC\tsolanesyl-diphosphate synthase, putative\tLmjF15.1020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1020\tLmjF.15.1020\t\tGO:0008299\tPMID:17062572\tISO\tGeneDB:TcCLB.509445.30\tP\tsolanesyl-diphosphate synthase, putative\tLmjF15.1020\tmRNA\ttaxon:347515\t20090930\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1020\tLmjF.15.1020\t\tGO:0020015\tPMID:17062572\tISO\tGeneDB:TcCLB.509445.30\tC\tsolanesyl-diphosphate synthase, putative\tLmjF15.1020\tmRNA\ttaxon:347515\t20090930\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1020\tLmjF.15.1020\t\tGO:0050347\tPMID:17062572\tISO\tGeneDB:TcCLB.509445.30\tF\tsolanesyl-diphosphate synthase, putative\tLmjF15.1020\tmRNA\ttaxon:347515\t20090930\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1030\tLmjF.15.1030\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5880\tC\tSKIP/SNW domain containing protein, putative\tLmjF15.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1030\tLmjF.15.1030\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5880\tC\tSKIP/SNW domain containing protein, putative\tLmjF15.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1040\tTRYP1\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5840\tC\ttryparedoxin peroxidase\tLmjF15.1040\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1040\tTRYP1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5840\tC\ttryparedoxin peroxidase\tLmjF15.1040\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1040\tTRYP1\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5840\tC\ttryparedoxin peroxidase\tLmjF15.1040\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1040\tTRYP1\t\tGO:0051920\tPMID:9851612|PMID:19497128\tIDA\t\tF\ttryparedoxin peroxidase\tLmjF15.1040\tmRNA\ttaxon:347515\t20090927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1050\tLmjF.15.1050\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5800\tC\tdevelopmentally regulated protein, putative\tLmjF15.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1060\tTRYP2\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5840\tC\ttryparedoxin peroxidase\tLmjF15.1060\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1060\tTRYP2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5840\tC\ttryparedoxin peroxidase\tLmjF15.1060\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1060\tTRYP2\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5840\tC\ttryparedoxin peroxidase\tLmjF15.1060\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1060\tTRYP2\t\tGO:0051920\tPMID:9851612|PMID:19497128\tIDA\t\tF\ttryparedoxin peroxidase\tLmjF15.1060\tmRNA\ttaxon:347515\t20090927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1070\tLmjF.15.1070\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5800\tC\tdevelopmentally regulated protein, putative\tLmjF15.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1080\tTRYP3\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5840\tC\ttryparedoxin peroxidase\tLmjF15.1080\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1080\tTRYP3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5840\tC\ttryparedoxin peroxidase\tLmjF15.1080\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1080\tTRYP3\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5840\tC\ttryparedoxin peroxidase\tLmjF15.1080\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1080\tTRYP3\t\tGO:0051920\tPMID:9851612|PMID:19497128\tIDA\t\tF\ttryparedoxin peroxidase\tLmjF15.1080\tmRNA\ttaxon:347515\t20090927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1090\tLmjF.15.1090\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5800\tC\tdevelopmentally regulated protein, 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"rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1100\tTRYP4\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5840\tC\ttryparedoxin peroxidase\tLmjF15.1100\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1100\tTRYP4\t\tGO:0051920\tPMID:9851612|PMID:19497128\tIDA\t\tF\ttryparedoxin peroxidase\tLmjF15.1100\tmRNA\ttaxon:347515\t20090927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1110\tLmjF.15.1110\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5800\tC\tdevelopmentally regulated protein, 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1170\tLmjF.15.1170\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5710\tC\thypothetical protein, conserved\tLmjF15.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1170\tLmjF.15.1170\t\tGO:0006351\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5710\tP\thypothetical protein, conserved\tLmjF15.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1207\tLmjF.15.1207\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5690\tC\t60S acidic ribosomal protein P2\tLmjF15.1207\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1210\tLmjF.15.1210\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5680\tC\tinositol/phosphatidylinositol phosphatase, putative\tLmjF15.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1210\tLmjF.15.1210\t\tGO:0051286\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5680\tC\tinositol/phosphatidylinositol phosphatase, putative\tLmjF15.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1230\tLmjF.15.1230\t\tGO:0015506\tPMID:19429678\tISO\tInterPro:IPR004740\tF\tnucleoside transporter 1, putative\tLmjF15.1230\tmRNA\ttaxon:347515\t20090902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1250\tUFC1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5650\tC\tE2-like ubiquitin-conjugation enzyme, 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1250\tUFC1\t\tGO:0032182\tPMID:21264253\tISO\tGeneDB:LinJ15.1270\tF\tE2-like ubiquitin-conjugation enzyme, putative\tLmjF15.1250\tmRNA\ttaxon:347515\t20110201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1250\tUFC1\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5650\tC\tE2-like ubiquitin-conjugation enzyme, putative\tLmjF15.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1270\tLmjF.15.1270\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5630\tC\thypothetical protein, conserved\tLmjF15.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1270\tLmjF.15.1270\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5630\tC\thypothetical protein, conserved\tLmjF15.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1270\tLmjF.15.1270\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5630\tC\thypothetical protein, conserved\tLmjF15.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1270\tLmjF.15.1270\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5630\tC\thypothetical protein, conserved\tLmjF15.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1290\tTOP2\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5590\tC\tmitochondrial DNA topoisomerase II\tLmjF15.1290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1300\tLmjF.15.1300\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5520\tC\tubiquitin hydrolase, putative\tLmjF15.1300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1300\tLmjF.15.1300\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5520\tC\tubiquitin hydrolase, putative\tLmjF15.1300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1300\tLmjF.15.1300\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5520\tC\tubiquitin hydrolase, putative\tLmjF15.1300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1310\tMGT1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5490\tC\tMGT1 magnesium transporter\tLmjF15.1310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1310\tMGT1\t\tGO:0005783\tPMID:19136005\tEXP\t\tC\tMGT1 magnesium transporter\tLmjF15.1310\tmRNA\ttaxon:347515\t20090721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1310\tMGT1\t\tGO:0006812\tPMID:19136005\tIGI\t\tP\tMGT1 magnesium transporter\tLmjF15.1310\tmRNA\ttaxon:347515\t20090721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1310\tMGT1\t\tGO:0015087\tPMID:19136005\tIGI\t\tF\tMGT1 magnesium transporter\tLmjF15.1310\tmRNA\ttaxon:347515\t20090721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1310\tMGT1\t\tGO:0015095\tPMID:19136005\tISM\t\tF\tMGT1 magnesium transporter\tLmjF15.1310\tmRNA\ttaxon:347515\t20090721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1310\tMGT1\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5490\tC\tMGT1 magnesium transporter\tLmjF15.1310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1310\tMGT1\t\tGO:0046583\tPMID:19136005\tIGI\t\tF\tMGT1 magnesium transporter\tLmjF15.1310\tmRNA\ttaxon:347515\t20090721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1320\teif4g2\t\tGO:0003676\tPMID:15694484\tISA\tEMBL:Q04637\tF\tEukaryotic translation initiation factor 4 gamma 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1320\teif4g2\t\tGO:0006139\tPMID:15694484\tISA\tEMBL:Q04637\tP\tEukaryotic translation initiation factor 4 gamma 2\tLmjF15.1320\tmRNA\ttaxon:347515\t20100329\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1320\teif4g2\t\tGO:0006412\tPMID:15694484\tISA\tEMBL:Q04637\tP\tEukaryotic translation initiation factor 4 gamma 2\tLmjF15.1320\tmRNA\ttaxon:347515\t20100329\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1320\teif4g2\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5460\tP\tEukaryotic translation initiation factor 4 gamma 2\tLmjF15.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1320\teif4g2\t\tGO:0016281\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5460\tC\tEukaryotic translation initiation factor 4 gamma 2\tLmjF15.1320\tmRNA\ttaxon:347515\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1340\tLmjF.15.1340\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5410\tC\thypothetical protein, conserved\tLmjF15.1340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1350\tLmjF.15.1350\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5380\tC\thypothetical protein, conserved\tLmjF15.1350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1370\tLmjF.15.1370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5330\tC\tPutative papain-like cysteine peptidase (DUF1796), putative\tLmjF15.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1380\tLmjF.15.1380\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5320\tF\tnucleolar RNA binding protein, putative\tLmjF15.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1380\tLmjF.15.1380\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5320\tC\tnucleolar RNA binding protein, putative\tLmjF15.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1400\tLmjF.15.1400\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5300\tC\thypothetical protein, conserved\tLmjF15.1400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1400\tLmjF.15.1400\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5300\tC\thypothetical protein, conserved\tLmjF15.1400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0000836\tGO_REF:0000002\tISA\tUniProtKB:HRD1_YEAST\tC\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0004842\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST\tF\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0005783\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN\tC\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0005789\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN|UniProtKB:HRD1_YEAST\tC\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0006986\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0008270\tGO_REF:0000002\tISM\tPfam:PF13639\tF\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5260\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0030433\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST|UniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1420\tLmjF.15.1420\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5240\tC\tmismatch repair protein MSH3, putative\tLmjF15.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1420\tLmjF.15.1420\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5240\tC\tmismatch repair protein MSH3, putative\tLmjF15.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1450\tLmjF.15.1450\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5190\tC\tproliferative cell nuclear antigen (PCNA), putative\tLmjF15.1450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1460\tLmjF.15.1460\t\tGO:0004631\tPMID:1846667\tISS\t\tF\tphosphomevalonate kinase protein, putative\tLmjF15.1460\tmRNA\ttaxon:347515\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1460\tLmjF.15.1460\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\tphosphomevalonate kinase protein, 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1460\tLmjF.15.1460\t\tGO:0006696\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tLmjF15.1460\tmRNA\ttaxon:347515\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1460\tLmjF.15.1460\t\tGO:0010142\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tLmjF15.1460\tmRNA\ttaxon:347515\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1460\tLmjF.15.1460\t\tGO:0019287\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tLmjF15.1460\tmRNA\ttaxon:347515\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1460\tLmjF.15.1460\t\tGO:0031388\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tLmjF15.1460\tmRNA\ttaxon:347515\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1470\tLmjF.15.1470\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5150\tC\tribosomal protein S6, putative\tLmjF15.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1480\tLmjF.15.1480\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5100\tC\tcAMP specific phosphodiesterase, putative\tLmjF15.1480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1480\tLmjF.15.1480\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.5100|GeneDB:Tb927.9.5040\tC\tcAMP specific phosphodiesterase, putative\tLmjF15.1480\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1490\tLmjF.15.1490\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5020\tC\thypothetical protein, conserved\tLmjF15.1490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1500\tLmjF.15.1500\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5000\tC\thypothetical protein, conserved\tLmjF15.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1500\tLmjF.15.1500\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5000\tC\thypothetical protein, conserved\tLmjF15.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1500\tLmjF.15.1500\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5000\tC\thypothetical protein, conserved\tLmjF15.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1500\tLmjF.15.1500\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.5000\tC\thypothetical protein, conserved\tLmjF15.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1510\tLmjF.15.1510\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4990\tC\thypothetical protein, conserved\tLmjF15.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1510\tLmjF.15.1510\t\tGO:0071162\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4990\tC\thypothetical protein, conserved\tLmjF15.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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base formation, putative\tLmjF15.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1540\tLmjF.15.1540\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.4950\tP\tRadical SAM superfamily/Wyosine base formation, putative\tLmjF15.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1560\tLmjF.15.1560\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.4900\tC\tcondensin subunit 1, putative\tLmjF15.1560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0010\tLmjF.16.0010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3980\tC\thypothetical protein, conserved\tLmjF16.0010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0010\tLmjF.16.0010\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3980\tC\thypothetical protein, conserved\tLmjF16.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0030\tPRMT6\t\tGO:0019919\tPMID:20418380|GO_REF:0000024\tISO\tGeneDB:Tb927.5.3960\tP\targinine N-methyltransferase, type I\tLmjF16.0030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0030\tPRMT6\t\tGO:0034969\tPMID:20418380|GO_REF:0000024\tISO\tGeneDB:Tb927.5.3960\tP\targinine N-methyltransferase, type I\tLmjF16.0030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0050\tLmjF.16.0050\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3940\tC\tDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein, putative\tLmjF16.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0050\tLmjF.16.0050\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3940\tC\tDEAD/DEAH box helicase/Helicase conserved C-terminal domain containing protein, putative\tLmjF16.0050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0060\tLmjF.16.0060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3920\tC\tperoxisome assembly protein, putative\tLmjF16.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0100\tLmjF.16.0100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3880\tC\tMORN repeat, putative\tLmjF16.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0100\tLmjF.16.0100\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3880\tC\tMORN repeat, putative\tLmjF16.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0100\tLmjF.16.0100\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3880\tC\tMORN repeat, putative\tLmjF16.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0120\tLmjF.16.0120\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3870\tC\thypothetical protein, conserved\tLmjF16.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0140\tLmjF.16.0140\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5880\tC\teukaryotic translation initiation factor 1A, putative\tLmjF16.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0150\tLmjF.16.0150\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5870\tC\thypothetical protein, conserved\tLmjF16.0150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0150\tLmjF.16.0150\t\tGO:0097542\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5870\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0180\tLmjF.16.0180\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5840\tC\thypothetical protein, conserved\tLmjF16.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0190\tLmjF.16.0190\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5820\tC\tLas1-like, putative\tLmjF16.0190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0190\tLmjF.16.0190\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5820\tC\tLas1-like, 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0290\tLmjF.16.0290\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5740\tC\tproteasome 26S non-ATPase subunit 9, putative\tLmjF16.0290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0310\tLmjF.16.0310\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5720\tC\tMet-10+ like-protein, putative\tLmjF16.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0440\tFKP40\t\tGO:0016310\tPMID:22649617\tIDA\t\tP\tBifunctional fucokinase/pyrophosphorylase\tLmjF16.0440\tmRNA\ttaxon:347515\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0440\tFKP40\t\tGO:0042350\tPMID:28465349\tIMP\t\tP\tBifunctional fucokinase/pyrophosphorylase\tLmjF16.0440\tmRNA\ttaxon:347515\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0440\tFKP40\t\tGO:0050201\tPMID:28465349\tIMP\t\tF\tBifunctional fucokinase/pyrophosphorylase\tLmjF16.0440\tmRNA\ttaxon:347515\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0450\tLmjF.16.0450\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5660\tC\thypothetical protein, conserved\tLmjF16.0450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0450\tLmjF.16.0450\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5660\tC\thypothetical protein, conserved\tLmjF16.0450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0480\tAFKP80\t\tGO:0050201\tPMID:28465349\tIMP\t\tF\tBifunctional arabino/fucokinase pyrophosphorylase\tLmjF16.0480\tmRNA\ttaxon:347515\t20170524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0520\tLmjF.16.0520\t\tGO:0003700\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5640\tF\thypothetical protein, conserved\tLmjF16.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0540\tLmjF.16.0540\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3820\tC\taspartate carbamoyltransferase, putative\tLmjF16.0540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0540\tLmjF.16.0540\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3820\tC\taspartate carbamoyltransferase, putative\tLmjF16.0540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0540\tLmjF.16.0540\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.3820\tC\taspartate carbamoyltransferase, putative\tLmjF16.0540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0550\tLmjF.16.0550\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3810\tC\torotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative\tLmjF16.0550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0690\tLmjF.16.0690\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3450\tP\teukaryotic translation initiation factor eIF2A, putative\tLmjF16.0690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0730\tLmjF.16.0730\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5620\tC\tubiquitin hydrolase, putative\tLmjF16.0730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0830\tIsa1\t\tGO:2000377\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.5540\tP\tIron-sulfur assembly protein 1, putative\tLmjF16.0830\tmRNA\ttaxon:347515\t20140121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0850\tLmjF.16.0850\t\tGO:0008180\tGO_REF:0000002\tISA\tUniProtKB:CSN5B_ARATH\tC\tCOP9 signalosome complex subunit 5, putative\tLmjF16.0850\tmRNA\ttaxon:347515\t20130903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0890\tLmjF.16.0890\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5490\tC\tNucleolar protein,Nop52, putative\tLmjF16.0890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0890\tLmjF.16.0890\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5490\tC\tNucleolar protein,Nop52, putative\tLmjF16.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0890\tLmjF.16.0890\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5490\tC\tNucleolar protein,Nop52, putative\tLmjF16.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0910\tLmjF.16.0910\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5470\tC\tflagellar calcium-binding protein, putative\tLmjF16.0910\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0910\tLmjF.16.0910\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5465\tC\tflagellar calcium-binding protein, putative\tLmjF16.0910\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0910\tLmjF.16.0910\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5465\tC\tflagellar calcium-binding protein, putative\tLmjF16.0910\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0920\tLmjF.16.0920\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5470\tC\tflagellar calcium-binding protein, putative\tLmjF16.0920\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0920\tLmjF.16.0920\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5465\tC\tflagellar calcium-binding protein, putative\tLmjF16.0920\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0920\tLmjF.16.0920\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5465\tC\tflagellar calcium-binding protein, putative\tLmjF16.0920\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0970\tLmjF.16.0970\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5410\tC\thypothetical protein, conserved\tLmjF16.0970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1065\tUFM1\t\tGO:0005739\tPMID:21264253\tISO\tGeneDB:LinJ.16.1100\tC\tubiquitin fold modifier protein, putative\tLmjF16.1065\tmRNA\ttaxon:347515\t20110201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1065\tUFM1\t\tGO:0032446\tPMID:21264253\tISO\tGeneDB:LinJ.16.1100\tP\tubiquitin fold modifier protein, putative\tLmjF16.1065\tmRNA\ttaxon:347515\t20110201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1070\tLmjF.16.1070\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5370\tP\thypothetical protein, conserved\tLmjF16.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1130\tLmjF.16.1130\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5330\tC\ttyrosyl or methionyl-tRNA synthetase-like protein\tLmjF16.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1170\tLmjF.16.1170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5260\tC\t60S ribosomal protein L39, putative\tLmjF16.1170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1180\tLmjF.16.1180\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5250\tC\tcoatomer delta subunit-like protein\tLmjF16.1180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1200\tCYP13\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5230\tC\tcyclophilin 13, putative\tLmjF16.1200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1200\tCYP13\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5230\tC\tcyclophilin 13, putative\tLmjF16.1200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1230\tLmjF.16.1230\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5200\tC\thypothetical protein, conserved\tLmjF16.1230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1250\tLmjF.16.1250\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5180\tC\thypothetical protein, conserved\tLmjF16.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1250\tLmjF.16.1250\t\tGO:0008380\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5180\tP\thypothetical protein, conserved\tLmjF16.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1290\tLmjF.16.1290\t\tGO:0004143\tGO_REF:0000002\tISO\tInterPro:IPR000756\tF\tdiacylglycerol kinase, putative\tLmjF16.1290\tmRNA\ttaxon:347515\t20100803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1290\tLmjF.16.1290\t\tGO:0005739\tPMID:18364711\tRCA\t\tC\tdiacylglycerol kinase, putative\tLmjF16.1290\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1290\tLmjF.16.1290\t\tGO:0019395\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.5140\tP\tdiacylglycerol kinase, putative\tLmjF16.1290\tmRNA\ttaxon:347515\t20100803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1300\tPOMP41\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5130\tC\tPresent in the outer mitochondrial membrane proteome 41\tLmjF16.1300\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1310\tLmjF.16.1310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5120\tC\tcytochrome c, putative\tLmjF16.1310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1310\tLmjF.16.1310\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5120\tC\tcytochrome c, putative\tLmjF16.1310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1310\tLmjF.16.1310\t\tGO:0009055\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5120\tF\tcytochrome c, putative\tLmjF16.1310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1310\tLmjF.16.1310\t\tGO:0009060\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5120\tP\tcytochrome c, putative\tLmjF16.1310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1320\tLmjF.16.1320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5120\tC\tcytochrome c, putative\tLmjF16.1320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1320\tLmjF.16.1320\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5120\tC\tcytochrome c, putative\tLmjF16.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1320\tLmjF.16.1320\t\tGO:0009055\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5120\tF\tcytochrome c, putative\tLmjF16.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1320\tLmjF.16.1320\t\tGO:0009060\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5120\tP\tcytochrome c, putative\tLmjF16.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1350\tRPA1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5090\tC\tDNA-directed rna polymerase I largest subunit, putative\tLmjF16.1350|RPA190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1380\tLmjF.16.1380\t\tGO:0005525\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5060\tF\tADP-ribosylation factor-like, putative\tLmjF16.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1380\tLmjF.16.1380\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5060\tC\tADP-ribosylation factor-like, putative\tLmjF16.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1380\tLmjF.16.1380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5060\tC\tADP-ribosylation factor-like, putative\tLmjF16.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1380\tLmjF.16.1380\t\tGO:0019003\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5060\tF\tADP-ribosylation factor-like, putative\tLmjF16.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1380\tLmjF.16.1380\t\tGO:0031410\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5060\tC\tADP-ribosylation factor-like, putative\tLmjF16.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1380\tLmjF.16.1380\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5060\tC\tADP-ribosylation factor-like, putative\tLmjF16.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1380\tLmjF.16.1380\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5060\tC\tADP-ribosylation factor-like, putative\tLmjF16.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1390\tLmjF.16.1390\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5040\tC\tEMG1/NEP1 methyltransferase, putative\tLmjF16.1390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1400\tLmjF.16.1400\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5030\tC\ttrafficking protein particle complex subunit- like protein\tLmjF16.1400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1400\tLmjF.16.1400\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5030\tP\ttrafficking protein particle complex subunit- like protein\tLmjF16.1400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1400\tLmjF.16.1400\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5030\tC\ttrafficking protein particle complex subunit- like protein\tLmjF16.1400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1425\tPFR2-3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5010\tC\tParaflagellar rod protein 2-3\tLmjF16.1425|PFR2C\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1425\tPFR2-3\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5010\tC\tParaflagellar rod protein 2-3\tLmjF16.1425|PFR2C\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1425\tPFR2-3\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5010\tC\tParaflagellar rod protein 2-3\tLmjF16.1425|PFR2C\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1427\tPFR2-2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5010\tC\tParaflagellar rod protein 2-2\tLmjF16.1427|PFR2B\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid 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"TriTrypDB\tLmjF.16.1430\tPFR2-1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5010\tC\tParaflagellar rod protein 2-1\tLmjF16.1430|PFR2A\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1430\tPFR2-1\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5010\tC\tParaflagellar rod protein 2-1\tLmjF16.1430|PFR2A\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1430\tPFR2-1\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5010\tC\tParaflagellar rod protein 2-1\tLmjF16.1430|PFR2A\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1460\tLmjF.16.1460\t\tGO:0005871\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4950\tC\tkinesin, putative\tLmjF16.1460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1460\tLmjF.16.1460\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4950\tC\tkinesin, putative\tLmjF16.1460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1460\tLmjF.16.1460\t\tGO:0030863\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4950\tC\tkinesin, putative\tLmjF16.1460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1460\tLmjF.16.1460\t\tGO:0032154\tGO_REF:0000024|GO_REF:0000101\tISO\tGeneDB:Tb927.8.4950\tC\tkinesin, putative\tLmjF16.1460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1470\tLmjF.16.1470\t\tGO:0005871\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4950\tC\tkinesin, putative\tLmjF16.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1470\tLmjF.16.1470\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4950\tC\tkinesin, putative\tLmjF16.1470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1470\tLmjF.16.1470\t\tGO:0030863\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4950\tC\tkinesin, putative\tLmjF16.1470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1470\tLmjF.16.1470\t\tGO:0032154\tGO_REF:0000024|GO_REF:0000101\tISO\tGeneDB:Tb927.8.4950\tC\tkinesin, putative\tLmjF16.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1480\tLmjF.16.1480\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4940\tC\thypothetical protein, conserved\tLmjF16.1480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1510\tLmjF.16.1510\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4910\tC\thypothetical protein, conserved\tLmjF16.1510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1530\tLmjF.16.1530\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4890\tC\tendoplasmic reticulum oxidoreductin, putative\tLmjF16.1530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1540\tLmjF.16.1540\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4880\tC\tDNA polymerase I alpha catalytic subunit, putative\tLmjF16.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1550\tLmjF.16.1550\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4870\tC\thypothetical protein, conserved\tLmjF16.1550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1550\tLmjF.16.1550\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4870\tC\thypothetical protein, conserved\tLmjF16.1550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1550\tLmjF.16.1550\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4870\tP\thypothetical protein, conserved\tLmjF16.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1560\tLmjF.16.1560\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4860\tC\thypothetical protein, conserved\tLmjF16.1560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1580\tLmjF.16.1580\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.4840\tC\tkinesin, putative\tLmjF16.1580\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1580\tLmjF.16.1580\t\tGO:0005871\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4840\tC\tkinesin, putative\tLmjF16.1580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1590\tU1-70K\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4830\tC\tu1 small nuclear ribonucleoprotein 70 kDa\tLmjF16.1590|snRNP-U1-70K|RBP24\tmRNA\ttaxon:347515\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1590\tU1-70K\t\tGO:0005685\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4830\tC\tu1 small nuclear ribonucleoprotein 70 kDa\tLmjF16.1590|snRNP-U1-70K|RBP24\tmRNA\ttaxon:347515\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1590\tU1-70K\t\tGO:0045292\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4830\tP\tu1 small nuclear ribonucleoprotein 70 kDa\tLmjF16.1590|snRNP-U1-70K|RBP24\tmRNA\ttaxon:347515\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1590\tU1-70K\t\tGO:1990446\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4830\tF\tu1 small nuclear ribonucleoprotein 70 kDa\tLmjF16.1590|snRNP-U1-70K|RBP24\tmRNA\ttaxon:347515\t20161206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1600\tEIF4G3\t\tGO:0005515\tPMID:21764780\tIPI\tGeneDB:LmjF.30.0450\tF\teukaryotic translation initiation factor 4 gamma 3\tLmjF16.1600\tmRNA\ttaxon:347515\t20120720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1600\tEIF4G3\t\tGO:0005515\tPMID:15694484\tIPI\tGeneDB:LmjF.01.0780|GeneDB:LmjF.01.0770\tF\teukaryotic translation initiation factor 4 gamma 3\tLmjF16.1600\tmRNA\ttaxon:347515\t20160127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1600\tEIF4G3\t\tGO:0005737\tPMID:19321500\tTAS\t\tC\teukaryotic translation initiation factor 4 gamma 3\tLmjF16.1600\tmRNA\ttaxon:347515\t20100325\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1600\tEIF4G3\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4820\tC\teukaryotic translation initiation factor 4 gamma 3\tLmjF16.1600\tmRNA\ttaxon:347515\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1600\tEIF4G3\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4820\tC\teukaryotic translation initiation factor 4 gamma 3\tLmjF16.1600\tmRNA\ttaxon:347515\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1600\tEIF4G3\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4820\tP\teukaryotic translation initiation factor 4 gamma 3\tLmjF16.1600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1600\tEIF4G3\t\tGO:0016281\tPMID:15694484|PMID:19321500\tIPI\tGeneDB:LmjF.01.0780|GeneDB:LmjF.01.0770|GeneDB:LmjF.27.1620|GeneDB:LmjF.30.0450\tC\teukaryotic translation initiation factor 4 gamma 3\tLmjF16.1600\tmRNA\ttaxon:347515\t20160127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": 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"TriTrypDB\tLmjF.16.1610\tLmjF.16.1610\t\tGO:0030544\tPMID:19888987\tIDA\t\tF\tprohibitin\tLmjF16.1610\tmRNA\ttaxon:347515\t20091210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1610\tLmjF.16.1610\t\tGO:0034235\tPMID:19888987\tIMP\t\tF\tprohibitin\tLmjF16.1610\tmRNA\ttaxon:347515\t20091210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1610\tLmjF.16.1610\t\tGO:0046658\tPMID:19888987\tIDA\t\tC\tprohibitin\tLmjF16.1610\tmRNA\ttaxon:347515\t20091210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1610\tLmjF.16.1610\t\tGO:0051881\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4810\tP\tprohibitin\tLmjF16.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1610\tLmjF.16.1610\t\tGO:0060187\tPMID:19888987\tIDA\t\tC\tprohibitin\tLmjF16.1610\tmRNA\ttaxon:347515\t20091210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1610\tLmjF.16.1610\t\tGO:0070129\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4810\tP\tprohibitin\tLmjF16.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1660\tFLAM3\t\tGO:0031514\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4780\tC\tFlagellar Member 3\tLmjF16.1660\tmRNA\ttaxon:347515\t20150813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1660\tFLAM3\t\tGO:0044458\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4780\tP\tFlagellar Member 3\tLmjF16.1660\tmRNA\ttaxon:347515\t20150817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF17.0040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0040\tJ26\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6200\tC\tDnaJ domain containing protein, putative\tLmjF17.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0060\tLmjF.17.0060\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6220\tP\tmitogen-activated protein kinase kinase 3, putative\tLmjF17.0060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0060\tLmjF.17.0060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6220\tC\tmitogen-activated protein kinase kinase 3, putative\tLmjF17.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0060\tLmjF.17.0060\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6220\tC\tmitogen-activated protein kinase kinase 3, putative\tLmjF17.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0070\tARL-1\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6230\tP\tADP-ribosylation factor-like protein 1\tLmjF17.0070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0070\tARL-1\t\tGO:0030100\tPMID:18286177\tIMP\t\tP\tADP-ribosylation factor-like protein 1\tLmjF17.0070\tmRNA\ttaxon:347515\t20100913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0120\tLmjF.17.0120\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6260\tC\thypothetical protein, conserved\tLmjF17.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0120\tLmjF.17.0120\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6260\tP\thypothetical protein, conserved\tLmjF17.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0270\tLmjF.17.0270\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6350\tC\tNADH-ubiquinone oxidoreductase, mitochondrial, putative\tLmjF17.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0270\tLmjF.17.0270\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6350\tC\tNADH-ubiquinone oxidoreductase, mitochondrial, putative\tLmjF17.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0280\tHA2Z\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6360\tC\thistone H2A variant Z\tLmjF17.0280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0280\tHA2Z\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6360\tC\thistone H2A variant Z\tLmjF17.0280\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0280\tHA2Z\t\tGO:0006367\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6360\tP\thistone H2A variant Z\tLmjF17.0280\tmRNA\ttaxon:347515\t20160107\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0280\tHA2Z\t\tGO:0051276\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6360\tP\thistone H2A variant Z\tLmjF17.0280\tmRNA\ttaxon:347515\t20160107\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0300\tLmjF.17.0300\t\tGO:0016607\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6380\tC\thypothetical protein, conserved\tLmjF17.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0380\tLmjF.17.0380\t\tGO:0005484\tGO_REF:0000002\tISM\tPANTHER:PTHR21230\tF\tQa-SNARE protein, putative\tLmjF17.0380\tmRNA\ttaxon:347515\t20130909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0380\tLmjF.17.0380\t\tGO:0006886\tGO_REF:0000002\tISM\tPANTHER:PTHR21230\tP\tQa-SNARE protein, putative\tLmjF17.0380\tmRNA\ttaxon:347515\t20130909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0380\tLmjF.17.0380\t\tGO:0031201\tGO_REF:0000002\tISM\tPANTHER:PTHR21230\tC\tQa-SNARE protein, putative\tLmjF17.0380\tmRNA\ttaxon:347515\t20130909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0440\tLmjF.17.0440\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6640\tC\thypothetical protein, conserved\tLmjF17.0440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0440\tLmjF.17.0440\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6640\tC\thypothetical protein, conserved\tLmjF17.0440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0440\tLmjF.17.0440\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6640\tP\thypothetical protein, conserved\tLmjF17.0440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0460\tJ10\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6660\tC\tDnaJ domain containing protein, putative\tLmjF17.0460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0470\tLmjF.17.0470\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6670\tC\thypothetical protein, conserved\tLmjF17.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0490\tLmjF.17.0490\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6680\tC\tSTE/STE11 serine/threonine-protein kinase, putative\tLmjF17.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0490\tLmjF.17.0490\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6680\tC\tSTE/STE11 serine/threonine-protein kinase, putative\tLmjF17.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0540\tLmjF.17.0540\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6740\tC\tATPase family associated with various cellular activities (AAA), putative\tLmjF17.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0620\tLmjF.17.0620\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6770\tC\tAcyl CoA binding protein, putative\tLmjF17.0620\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0620\tLmjF.17.0620\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6770\tC\tAcyl CoA binding protein, putative\tLmjF17.0620\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0620\tLmjF.17.0620\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6770\tC\tAcyl CoA binding protein, putative\tLmjF17.0620\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0700\tLmjF.17.0700\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2050\tC\tPutative methyltransferase, putative\tLmjF17.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0710\tLmjF.17.0710\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2060\tC\tMyb-like DNA-binding domain containing protein, putative\tLmjF17.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0710\tLmjF.17.0710\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2060\tC\tMyb-like DNA-binding domain containing protein, putative\tLmjF17.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0720\tLmjF.17.0720\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2070\tC\thypothetical protein, conserved\tLmjF17.0720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0720\tLmjF.17.0720\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2070\tC\thypothetical protein, conserved\tLmjF17.0720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0720\tLmjF.17.0720\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2070\tC\thypothetical protein, conserved\tLmjF17.0720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0725\tGMPR\t\tGO:0003920\tGO_REF:0000024\tISO\tGeneDB:LdBPK_170870.1|GeneDB:Tb927.5.2080\tF\tGMP reductase\tLmjF17.0725\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0725\tGMPR\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2080\tC\tGMP reductase\tLmjF17.0725\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0725\tGMPR\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2080\tC\tGMP reductase\tLmjF17.0725\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0760\tLmjF.17.0760\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6800\tC\tAlpha/beta hydrolase family, putative\tLmjF17.0760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0760\tLmjF.17.0760\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6800\tC\tAlpha/beta hydrolase family, putative\tLmjF17.0760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0780\tLmjF.17.0780\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6770\tC\tAcyl CoA binding protein, putative\tLmjF17.0780\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0780\tLmjF.17.0780\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6770\tC\tAcyl CoA binding protein, putative\tLmjF17.0780\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0780\tLmjF.17.0780\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.6770\tC\tAcyl CoA binding protein, putative\tLmjF17.0780\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0800\tLmjF.17.0800\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2090\tC\tOSM3-like kinesin, putative\tLmjF17.0800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0800\tLmjF.17.0800\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2090\tC\tOSM3-like kinesin, putative\tLmjF17.0800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0800\tLmjF.17.0800\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2090\tP\tOSM3-like kinesin, putative\tLmjF17.0800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0810\tRBP30\t\tGO:0003723\tPMID:18840477\tISS\tPfam:PF14259|SMART:SM00360\tF\tRNA-binding protein, putative\tLmjF17.0810\tmRNA\ttaxon:347515\t20140106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0840\tLmjF.17.0840\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2150\tC\thypothetical protein, conserved\tLmjF17.0840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0870\tMETA2\t\tGO:0005829\tPMID:20713053\tIDA\t\tC\tMETA domain containing protein\tLmjF17.0870\tmRNA\ttaxon:347515\t20100928\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0870\tMETA2\t\tGO:0005929\tPMID:20713053\tIDA\t\tC\tMETA domain containing protein\tLmjF17.0870\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0870\tMETA2\t\tGO:0034599\tPMID:20713053\tIMP\t\tP\tMETA domain containing protein\tLmjF17.0870\tmRNA\ttaxon:347515\t20100928\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0870\tMETA2\t\tGO:0034605\tPMID:20713053\tIMP\t\tP\tMETA domain containing protein\tLmjF17.0870\tmRNA\ttaxon:347515\t20100928\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0900\tLmjF.17.0900\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2270\tC\thypothetical protein, conserved\tLmjF17.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0900\tLmjF.17.0900\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2270\tC\thypothetical protein, conserved\tLmjF17.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0920\tLmjF.17.0920\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2290\tC\tATP-dependent RNA helicase, putative\tLmjF17.0920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0920\tLmjF.17.0920\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2290\tC\tATP-dependent RNA helicase, putative\tLmjF17.0920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0980\tLmjF.17.0980\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2320\tC\tMak10 subunit, NatC N(alpha)-terminal acetyltransferase, putative\tLmjF17.0980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0990\tLmjF.17.0990\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2330\tC\thypothetical protein, conserved\tLmjF17.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1010\tLmjF.17.1010\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2380\tC\thydrolase, alpha/beta fold family-like protein\tLmjF17.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1010\tLmjF.17.1010\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2380\tC\thydrolase, alpha/beta fold family-like protein\tLmjF17.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1040\tLmjF.17.1040\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2370\tC\thydrolase-like protein\tLmjF17.1040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1090\tLmjF.17.1090\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2400\tC\tcysteine peptidase, Clan CA, family C19, putative\tLmjF17.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1110\tLmjF.17.1110\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2410\tC\tkinesin, putative\tLmjF17.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1110\tLmjF.17.1110\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2410\tC\tkinesin, putative\tLmjF17.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1110\tLmjF.17.1110\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2410\tP\tkinesin, putative\tLmjF17.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1110\tLmjF.17.1110\t\tGO:0097542\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2410\tC\tkinesin, putative\tLmjF17.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1140\tLmjF.17.1140\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2440\tC\tWW domain containing protein, putative\tLmjF17.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1150\tLmjF.17.1150\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2450\tC\t5'-3' exoribonuclease B, putative\tLmjF17.1150\tmRNA\ttaxon:347515\t20150319\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1160\tUSP\t\tGO:0002134\tPMID:19906649\tIDA\t\tF\tUDP-sugar pyrophosphorylase\tLmjF17.1160\tmRNA\ttaxon:347515\t20091117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1160\tUSP\t\tGO:0017103\tPMID:19906649\tIDA\t\tF\tUDP-sugar pyrophosphorylase\tLmjF17.1160\tmRNA\ttaxon:347515\t20091117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1160\tUSP\t\tGO:0043763\tPMID:19906649\tIDA\t\tF\tUDP-sugar pyrophosphorylase\tLmjF17.1160\tmRNA\ttaxon:347515\t20091117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1200\tLmjF.17.1200\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2500\tC\thypothetical protein, conserved\tLmjF17.1200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1250\tNAT10\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2530\tC\tRNA cytidine acetyltransferase\tLmjF17.1250|KRE33\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1250\tNAT10\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2530\tC\tRNA cytidine acetyltransferase\tLmjF17.1250|KRE33\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1260\tLmjF.17.1260\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2540\tC\tOrganic solute transport protein 1, putative\tLmjF17.1260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1290\tEIF3B\t\tGO:0005737\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\teukaryotic translation initiation factor 3 subunit b\tLmjF17.1290\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1290\tEIF3B\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2570\tC\teukaryotic translation initiation factor 3 subunit b\tLmjF17.1290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1290\tEIF3B\t\tGO:0005852\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\teukaryotic translation initiation factor 3 subunit b\tLmjF17.1290\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1320\tLmjF.17.1320\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2620\tC\thypothetical protein, conserved\tLmjF17.1320\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1320\tLmjF.17.1320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2620\tC\thypothetical protein, 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1360\tALO\t\tGO:0010181\tGO_REF:0000024\tISO\tGeneDB:TcCLB.509179.100\tF\tL-galactonolactone oxidase, putative\tLmjF17.1360|GALDH|GAL\tmRNA\ttaxon:347515\t20150407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1360\tALO\t\tGO:0019853\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2650|GeneDB:TcCLB.509179.100\tP\tL-galactonolactone oxidase, putative\tLmjF17.1360|GALDH|GAL\tmRNA\ttaxon:347515\t20090629\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1360\tALO\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2650|GeneDB:TcCLB.509179.100\tC\tL-galactonolactone oxidase, putative\tLmjF17.1360|GALDH|GAL\tmRNA\ttaxon:347515\t20090629\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1360\tALO\t\tGO:0020022\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2650\tC\tL-galactonolactone oxidase, putative\tLmjF17.1360|GALDH|GAL\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1360\tALO\t\tGO:0050024\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2650|GeneDB:TcCLB.509179.100\tF\tL-galactonolactone oxidase, putative\tLmjF17.1360|GALDH|GAL\tmRNA\ttaxon:347515\t20090629\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1360\tALO\t\tGO:0050105\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.2650\tF\tL-galactonolactone oxidase, putative\tLmjF17.1360|GALDH|GAL\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1380\tLmjF.17.1380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2680\tC\thypothetical protein, conserved\tLmjF17.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1380\tLmjF.17.1380\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2680\tC\thypothetical protein, conserved\tLmjF17.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1390\tLmjF.17.1390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2690\tC\tmyo-inositol-1(or 4)-monophosphatase 1, putative\tLmjF17.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1390\tLmjF.17.1390\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2690\tC\tmyo-inositol-1(or 4)-monophosphatase 1, putative\tLmjF17.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1390\tLmjF.17.1390\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2690\tC\tmyo-inositol-1(or 4)-monophosphatase 1, putative\tLmjF17.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.1410\tLmjF.17.1410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2720\tC\tzinc-finger protein ZPR1, 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0010\tKPAF1\t\tGO:0031124\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3180\tP\tkinetoplast polyadenylation/uridylation factor 1\tLmjF18.0010\tmRNA\ttaxon:347515\t20110527\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0010\tKPAF1\t\tGO:0043022\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3180\tF\tkinetoplast polyadenylation/uridylation factor 1\tLmjF18.0010\tmRNA\ttaxon:347515\t20110527\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0010\tKPAF1\t\tGO:0043488\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3180\tP\tkinetoplast polyadenylation/uridylation factor 1\tLmjF18.0010\tmRNA\ttaxon:347515\t20110527\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0020\tLmjF.18.0020\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13560\tC\tmevalonate-diphosphate decarboxylase, putative\tLmjF18.0020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0020\tLmjF.18.0020\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14070\tC\tmevalonate-diphosphate decarboxylase, putative\tLmjF18.0020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0020\tLmjF.18.0020\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13560\tC\tmevalonate-diphosphate decarboxylase, putative\tLmjF18.0020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0030\tRBP27\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14080\tC\tRNA-binding protein 27, putative\tLmjF18.0030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0060\tLmjF.18.0060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13600\tC\thypothetical protein, conserved\tLmjF18.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0070\tLmjF.18.0070\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13610\tP\tzinc-finger of a C2HC-type/Double zinc ribbon, putative\tLmjF18.0070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0070\tLmjF.18.0070\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13610\tC\tzinc-finger of a C2HC-type/Double zinc ribbon, putative\tLmjF18.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0070\tLmjF.18.0070\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13610\tC\tzinc-finger of a C2HC-type/Double zinc ribbon, putative\tLmjF18.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0080\tLmjF.18.0080\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13620\tC\t3-beta hydroxysteroid dehydrogenase/isomerase 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Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0120\tLmjF.18.0120\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13650\tC\tADP-ribosylation factor-like protein 2-binding protein, putative\tLmjF18.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0120\tLmjF.18.0120\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13650\tC\tADP-ribosylation factor-like protein 2-binding protein, putative\tLmjF18.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0130\tLmjF.18.0130\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tDomain of unknown function DUF21, putative\tLmjF18.0130\tmRNA\ttaxon:347515\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0150\tLmjF.18.0150\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13670\tC\tserine/threonine protein phosphatase type 5, putative\tLmjF18.0150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0150\tLmjF.18.0150\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13670\tC\tserine/threonine protein phosphatase type 5, putative\tLmjF18.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0200\tGLF\t\tGO:0008767\tPMID:21419104\tISO\tGeneDB:LmjF.18.0200\tF\tUDP-galactopyranose mutase\tUGM|LmjF18.0200\tmRNA\ttaxon:347515\t20110331\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0210\tLmjF.18.0210\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13710\tC\tActivator of Hsp90 ATPase, N-terminal/Activator of Hsp90 ATPase homolog 1-like protein, putative\tLmjF18.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0210\tLmjF.18.0210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13710\tC\tActivator of Hsp90 ATPase, N-terminal/Activator of Hsp90 ATPase homolog 1-like protein, putative\tLmjF18.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0220\tRBP29\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13720\tF\tRNA-binding protein 29, putative\tLmjF18.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0220\tRBP29\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13720\tC\tRNA-binding protein 29, putative\tLmjF18.0220\tmRNA\ttaxon:347515\t20140626\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0220\tRBP29\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13720\tC\tRNA-binding protein 29, putative\tLmjF18.0220\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0220\tRBP29\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13720\tP\tRNA-binding protein 29, putative\tLmjF18.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0230\tLmjF.18.0230\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13730\tC\t60S ribosomal protein L7, putative\tLmjF18.0230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0260\tLmjF.18.0260\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13770\tC\thypothetical protein, conserved\tLmjF18.0260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0260\tLmjF.18.0260\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13770\tC\thypothetical protein, conserved\tLmjF18.0260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0004674\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13780\tF\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0005634\tGO_REF:0000024\tISS\tGeneDB:LdBPK_180270.1\tC\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LdBPK_180270.1\tC\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LdBPK_180270.1\tC\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20140612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0010389\tGO_REF:0000024\tISO\tGeneDB:LdBPK_180270.1\tP\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13780\tC\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13780\tC\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0097542\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13780\tC\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0300\tLmjF.18.0300\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13800\tC\thypothetical protein, conserved\tLmjF18.0300\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0300\tLmjF.18.0300\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13800\tP\thypothetical protein, conserved\tLmjF18.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0310\tLmjF.18.0310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13810\tC\thypothetical protein, conserved\tLmjF18.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0360\tGPI8\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13860\tC\tGPI-anchor transamidase subunit 8 (GPI8), putative\tLmjF18.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0360\tGPI8\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13860\tC\tGPI-anchor transamidase subunit 8 (GPI8), putative\tLmjF18.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0620\tLmjF.18.0620\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13500\tC\t60S ribosomal protein L10a, putative\tLmjF18.0620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0620\tLmjF.18.0620\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13500\tC\t60S ribosomal protein L10a, putative\tLmjF18.0620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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}, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0810\tLmjF.18.0810\t\tGO:0005783\tPMID:27062077\tIDA\t\tC\tethanolamine phosphotransferase, putative\tLmjF18.0810\tmRNA\ttaxon:347515\t20160922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0810\tLmjF.18.0810\t\tGO:0006646\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13290\tP\tethanolamine phosphotransferase, putative\tLmjF18.0810\tmRNA\ttaxon:347515\t20090429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0820\tLmjF.18.0820\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13280\tC\thypothetical protein, 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when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0830\tLmjF.18.0830\t\tGO:0032040\tGO_REF:0000012\tISA\tUniProtKB:PWP2_YEAST\tC\tPeriodic tryptophan protein 2 homolog, putative\tLmjF18.0830\tmRNA\ttaxon:347515\t20140918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0830\tLmjF.18.0830\t\tGO:0034388\tGO_REF:0000012\tISA\tUniProtKB:PWP2_YEAST\tC\tPeriodic tryptophan protein 2 homolog, putative\tLmjF18.0830\tmRNA\ttaxon:347515\t20140918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0840\tLmjF.18.0840\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13260\tC\thypothetical protein, conserved\tLmjF18.0840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0860\tLmjF.18.0860\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13240\tC\thypothetical protein, conserved\tLmjF18.0860\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0870\tLmjF.18.0870\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13230\tC\thypothetical protein, conserved\tLmjF18.0870\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0870\tLmjF.18.0870\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13230\tC\thypothetical protein, conserved\tLmjF18.0870\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0880\tCYP16\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13220\tC\tcyclosporin 16, putative\tLmjF18.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0900\tLmjF.18.0900\t\tGO:0004582\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.10.13210\tF\tdolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase, putative\tLmjF18.0900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0900\tLmjF.18.0900\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13210\tC\tdolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase, putative\tLmjF18.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0900\tLmjF.18.0900\t\tGO:0005789\tPMID:20382188\tTAS\t\tC\tdolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase, putative\tLmjF18.0900\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0900\tLmjF.18.0900\t\tGO:0035268\tPMID:14973778\tIC\t\tP\tdolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase, putative\tLmjF18.0900\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0910\tLmjF.18.0910\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13200\tC\thypothetical protein, conserved\tLmjF18.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0920\tARPC1\t\tGO:0005198\tGO_REF:0000012\tISA\tUniProtKB:O88656\tF\tactin-related protein 2/3 complex subunit 1, putative\tLmjF18.0920\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0920\tARPC1\t\tGO:0005885\tGO_REF:0000012\tISA\tUniProtKB:O15143\tC\tactin-related protein 2/3 complex subunit 1, putative\tLmjF18.0920\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0920\tARPC1\t\tGO:0030036\tGO_REF:0000012\tISA\tUniProtKB:Q92747\tP\tactin-related protein 2/3 complex subunit 1, putative\tLmjF18.0920\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0940\tLmjF.18.0940\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13180\tC\tNrap protein, putative\tLmjF18.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0940\tLmjF.18.0940\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13180\tC\tNrap protein, putative\tLmjF18.0940\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0950\tLmjF.18.0950\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13170\tC\thypothetical protein, conserved\tLmjF18.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0960\tGPI18\t\tGO:0000009\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13160\tF\tmannosyltransferase-II, putative\tLmjF18.0960\tmRNA\ttaxon:347515\t20100915\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0960\tGPI18\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13160\tC\tmannosyltransferase-II, putative\tLmjF18.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0970\tLmjF.18.0970\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13150\tC\thypothetical protein, conserved\tLmjF18.0970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0980\tLmjF.18.0980\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13140\tC\thypothetical protein, conserved\tLmjF18.0980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0990\tLmjF.18.0990\t\tGO:0003983\tPMID:16611637|GO_REF:0000024\tISO\tGeneDB:Tb927.10.13130\tF\tUDP-glucose pyrophosphorylase\tLmjF18.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0990\tLmjF.18.0990\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13130\tC\tUDP-glucose pyrophosphorylase\tLmjF18.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0990\tLmjF.18.0990\t\tGO:0005829\tPMID:16611637\tEXP\t\tC\tUDP-glucose pyrophosphorylase\tLmjF18.0990\tmRNA\ttaxon:347515\t20090603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0990\tLmjF.18.0990\t\tGO:0006011\tPMID:16611637\tIDA\t\tP\tUDP-glucose pyrophosphorylase\tLmjF18.0990\tmRNA\ttaxon:347515\t20090603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0990\tLmjF.18.0990\t\tGO:0020015\tGO_REF:0000002\tISO\tGeneDB:Tb.927.10.13130\tC\tUDP-glucose pyrophosphorylase\tLmjF18.0990\tmRNA\ttaxon:347515\t20110318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0990\tLmjF.18.0990\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13130\tC\tUDP-glucose pyrophosphorylase\tLmjF18.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0990\tLmjF.18.0990\t\tGO:0046872\tGO_REF:0000002\tISO\tGeneDB:Tb.927.10.13130\tF\tUDP-glucose pyrophosphorylase\tLmjF18.0990\tmRNA\ttaxon:347515\t20110318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0990\tLmjF.18.0990\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13130\tC\tUDP-glucose pyrophosphorylase\tLmjF18.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1000\tLmjF.18.1000\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13120\tC\tmitochondrial carrier protein, putative\tLmjF18.1000\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1000\tLmjF.18.1000\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13120\tC\tmitochondrial carrier protein, putative\tLmjF18.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1000\tLmjF.18.1000\t\tGO:0015824\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.13120\tP\tmitochondrial carrier protein, putative\tLmjF18.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1010\tLC7\t\tGO:0003777\tGO_REF:0000012\tISA\tUniProtKB:Q8TF09\tF\tDynein light chain roadblock-type\tLmjF18.1010\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1010\tLC7\t\tGO:0005868\tGO_REF:0000012\tISA\tUniProtKB:Q8TF09\tC\tDynein light chain roadblock-type\tLmjF18.1010\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1010\tLC7\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:LmxM.18.1010\tC\tDynein light chain roadblock-type\tLmjF18.1010\tmRNA\ttaxon:347515\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1010\tLC7\t\tGO:0007018\tGO_REF:0000012\tISA\tUniProtKB:Q8TF09\tP\tDynein light chain roadblock-type\tLmjF18.1010\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1040\tLmjF.18.1040\t\tGO:0006749\tPMID:16020724\tIGC\t\tP\t5-oxoprolinase, putative\tLmjF18.1040\tmRNA\ttaxon:347515\t20091229\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1050\tLmjF.18.1050\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13070\tC\thypothetical protein, conserved\tLmjF18.1050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1070\tLmjF.18.1070\t\tGO:0005737\tGO_REF:0000011\tISM\tInterPro:IPR006926\tC\tVacuolar protein sorting-associated protein 16 homolog, putative\tLmjF18.1070\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1070\tLmjF.18.1070\t\tGO:0006886\tGO_REF:0000011\tISM\tInterPro:IPR006926\tP\tVacuolar protein sorting-associated protein 16 homolog, 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1090\tPDEA\t\tGO:0004115\tGO_REF:0000002\tISO\tGeneDB:LinJ.18.1100\tF\tcAMP phosphodiesterase A, putative\tLmjF18.1090\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1090\tPDEA\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.13000\tC\tcAMP phosphodiesterase A, putative\tLmjF18.1090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1090\tPDEA\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:LinJ.18.1100\tC\tcAMP 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1100\tLmjF.18.1100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12990\tC\tAnkyrin repeats (3 copies), putative\tLmjF18.1100\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1100\tLmjF.18.1100\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12990\tC\tAnkyrin repeats (3 copies), putative\tLmjF18.1100\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1110\tLmjF.18.1110\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12980\tC\tMultisite-specific tRNA:(cytosine-C(5))-methyltransferase, putative\tLmjF18.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1110\tLmjF.18.1110\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12980\tC\tMultisite-specific tRNA:(cytosine-C(5))-methyltransferase, putative\tLmjF18.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1110\tLmjF.18.1110\t\tGO:0030488\tGO_REF:0000012\tISA\tUniProtKB:NCL1_YEAST\tP\tMultisite-specific tRNA:(cytosine-C(5))-methyltransferase, putative\tLmjF18.1110\tmRNA\ttaxon:347515\t20140918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1140\tLmjF.18.1140\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12950\tC\thypothetical protein, conserved\tLmjF18.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1150\tLmjF.18.1150\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12940\tC\tZinc finger, C3HC4 type (RING finger), putative\tLmjF18.1150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1190\tLmjF.18.1190\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12910\tC\thypothetical protein, conserved\tLmjF18.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1190\tLmjF.18.1190\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12910\tC\thypothetical protein, conserved\tLmjF18.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1200\tLmjF.18.1200\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12900\tC\tComplex 1 protein (LYR family), putative\tLmjF18.1200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1230\tLmjF.18.1230\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12880\tC\tSET domain containing protein, putative\tLmjF18.1230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1260\tMCP12\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1260\tMCP12\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1260\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1260\tMCP12\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1260\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1265\tMCP12\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1265\tMCP12\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1265\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1265\tMCP12\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1265\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1270\tMCP12\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1270\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1270\tMCP12\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1270\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1270\tMCP12\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1270\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1270\tMCP12\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1270\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1270\tMCP12\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1270\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1275\tMCP12\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1275\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1275\tMCP12\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1275\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1275\tMCP12\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1280\tMCP12\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1280\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1280\tMCP12\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1280\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1280\tMCP12\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1290\tMCP12\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1290\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1290\tMCP12\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1290\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1290\tMCP12\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1290\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1290\tMCP12\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1290\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1290\tMCP12\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1300\tMCP12\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1300\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1300\tMCP12\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1300\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1300\tMCP12\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12840\tC\tmitochondrial carrier protein, putative\tLmjF18.1300\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1330\tLmjF.18.1330\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12810\tC\tcholinephosphate cytidylyltransferase A, putative\tLmjF18.1330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1330\tLmjF.18.1330\t\tGO:0005829\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.10.12810|GeneDB:LinJ.18.1310\tC\tcholinephosphate cytidylyltransferase A, putative\tLmjF18.1330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1330\tLmjF.18.1330\t\tGO:0006656\tGO_REF:0000002\tISS\t\tP\tcholinephosphate cytidylyltransferase A, putative\tLmjF18.1330\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1330\tLmjF.18.1330\t\tGO:0070567\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.10.12810|GeneDB:LinJ.18.1310\tF\tcholinephosphate cytidylyltransferase A, putative\tLmjF18.1330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { 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Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1350\tLmjF.18.1350\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12740\tP\thypothetical protein, conserved\tLmjF18.1350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1360\tLmjF.18.1360\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12720\tP\thypothetical protein, conserved\tLmjF18.1360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1370\tHSP110\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\theat shock protein 110, putative\tLmjF18.1370\tmRNA\ttaxon:347515\t20120410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1380\tLmjF.18.1380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12700\tC\tpyruvate dehydrogenase E1 component alpha subunit, putative\tLmjF18.1380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1380\tLmjF.18.1380\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12700\tC\tpyruvate dehydrogenase E1 component alpha subunit, putative\tLmjF18.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1390\tLmjF.18.1390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12690\tC\thypothetical protein, conserved\tLmjF18.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1420\tPUF2\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12660\tF\tpumilio protein 2, putative\tLmjF18.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1420\tPUF2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12660\tC\tpumilio protein 2, putative\tLmjF18.1420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1420\tPUF2\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12660\tP\tpumilio protein 2, putative\tLmjF18.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1440\tLmjF.18.1440\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12630\tC\tEF-hand domain pair, putative\tLmjF18.1440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1460\tLmjF.18.1460\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12590\tC\thypothetical protein, conserved\tLmjF18.1460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1460\tLmjF.18.1460\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12590\tC\thypothetical protein, conserved\tLmjF18.1460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1460\tLmjF.18.1460\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12590\tC\thypothetical protein, conserved\tLmjF18.1460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1460\tLmjF.18.1460\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12590\tC\thypothetical protein, conserved\tLmjF18.1460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1480\tNDUFS1\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb917.10.12540\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF18.1480\tmRNA\ttaxon:347515\t20140918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1490\tJ13\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12530\tC\tchaperone protein DnaJ, putative\tLmjF18.1490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1490\tJ13\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12530\tC\tchaperone protein DnaJ, putative\tLmjF18.1490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1490\tJ13\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12530\tC\tchaperone protein DnaJ, putative\tLmjF18.1490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1530\tLmjF.18.1530\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12490\tC\tkinesin, putative\tLmjF18.1530\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1530\tLmjF.18.1530\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12490\tP\tkinesin, putative\tLmjF18.1530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1560\tLmjF.18.1560\t\tGO:0051286\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12470\tC\thypothetical protein, conserved\tLmjF18.1560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1580\tNH\t\tGO:0005509\tPMID:10409664\tISS\t\tF\tnonspecific nucleoside hydrolase\tLmjF18.1580\tmRNA\ttaxon:347515\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1580\tNH\t\tGO:0008477\tPMID:10409664|PMID:11738828|PMID:19497128\tIDA\t\tF\tnonspecific nucleoside hydrolase\tLmjF18.1580\tmRNA\ttaxon:347515\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1580\tNH\t\tGO:0043101\tPMID:10409664|PMID:11738828\tIDA\t\tP\tnonspecific nucleoside hydrolase\tLmjF18.1580\tmRNA\ttaxon:347515\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1580\tNH\t\tGO:0045437\tPMID:10409664|PMID:11738828|PMID:19497128\tIDA\t\tF\tnonspecific nucleoside hydrolase\tLmjF18.1580\tmRNA\ttaxon:347515\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1580\tNH\t\tGO:0047724\tPMID:10409664|PMID:11738828|PMID:19497128\tIDA\t\tF\tnonspecific nucleoside hydrolase\tLmjF18.1580\tmRNA\ttaxon:347515\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1580\tNH\t\tGO:0050263\tPMID:10409664|PMID:11738828|PMID:19497128\tIDA\t\tF\tnonspecific nucleoside hydrolase\tLmjF18.1580\tmRNA\ttaxon:347515\t20091020\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1600\tLmjF.18.1600\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12440\tC\tkinesin, putative\tLmjF18.1600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1610\tLmjF.18.1610\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12430\tC\tNoc2p family, putative\tLmjF18.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1620\tLmjF.18.1620\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12420\tC\tGot1/Sft2-like family, putative\tLmjF18.1620\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1650\tJ42\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12380\tC\tchaperone protein DnaJ, putative\tLmjF18.1650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1660\tGSH1\t\tGO:0000302\tPMID:19818018|GO_REF:0000024\tISO\tGeneDB:Tb927.10.12370|GeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase, putative\tLmjF18.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1660\tGSH1\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12370\tC\tgamma-glutamylcysteine synthetase, putative\tLmjF18.1660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1660\tGSH1\t\tGO:0006750\tPMID:19818018|GO_REF:0000024\tISO\tGeneDB:Tb927.10.12370|GeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase, putative\tLmjF18.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1660\tGSH1\t\tGO:0019342\tPMID:19818018|GO_REF:0000024\tISO\tGeneDB:Tb927.10.12370|GeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase, putative\tLmjF18.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0010\tLmjF.19.0010\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14690\tC\tQb-SNARE protein, putative\tLmjF19.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0010\tLmjF.19.0010\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14690\tC\tQb-SNARE protein, putative\tLmjF19.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0010\tLmjF.19.0010\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14690\tC\tQb-SNARE protein, putative\tLmjF19.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0020\tLmjF.19.0020\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14700\tF\thypothetical protein, conserved\tLmjF19.0020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0020\tLmjF.19.0020\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14700\tC\thypothetical protein, conserved\tLmjF19.0020\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0020\tLmjF.19.0020\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14700\tC\thypothetical protein, conserved\tLmjF19.0020\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0020\tLmjF.19.0020\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14700\tC\thypothetical protein, conserved\tLmjF19.0020\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0020\tLmjF.19.0020\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14700\tC\thypothetical protein, conserved\tLmjF19.0020\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0060\tLmjF.19.0060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14710\tC\t40S ribosomal protein S2\tLmjF19.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0070\tPEX13\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14720\tC\tperoxin 13, putative\tLmjF19.0070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0070\tPEX13\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14720\tC\tperoxin 13, putative\tLmjF19.0070\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0070\tPEX13\t\tGO:0007031\tPMID:19185591\tISO\tGeneDB:Tb927.10.14720\tP\tperoxin 13, putative\tLmjF19.0070\tmRNA\ttaxon:347515\t20101015\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0070\tPEX13\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14720\tP\tperoxin 13, putative\tLmjF19.0070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0070\tPEX13\t\tGO:0015919\tPMID:19185591\tISO\tGeneDB:Tb927.10.14720\tP\tperoxin 13, putative\tLmjF19.0070\tmRNA\ttaxon:347515\t20101015\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0070\tPEX13\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14720\tC\tperoxin 13, putative\tLmjF19.0070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0070\tPEX13\t\tGO:0046860\tPMID:19185591\tISO\tGeneDB:Tb927.10.14720\tC\tperoxin 13, putative\tLmjF19.0070\tmRNA\ttaxon:347515\t20101015\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0100\tLmjF.19.0100\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14750\tC\tfibrillarin, putative\tLmjF19.0100\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0120\tLmjF.19.0120\t\tGO:0031982\tPMID:17026746\tEXP\t\tC\tQA-SNARE protein putative\tLmjF19.0120\tmRNA\ttaxon:347515\t20090403\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0140\tAKB1\t\tGO:0004672\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14770\tF\tAssociated kinase of Tb14-3-3, putative\tLmjF19.0140\tmRNA\ttaxon:347515\t20150708\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0140\tAKB1\t\tGO:0008017\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14770\tF\tAssociated kinase of Tb14-3-3, putative\tLmjF19.0140\tmRNA\ttaxon:347515\t20150708\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0140\tAKB1\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14770\tP\tAssociated kinase of Tb14-3-3, putative\tLmjF19.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0140\tAKB1\t\tGO:0042803\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14770\tF\tAssociated kinase of Tb14-3-3, putative\tLmjF19.0140\tmRNA\ttaxon:347515\t20150708\tGeneDB\t\t", "type": 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0180\tMPK9\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen-activated protein kinase 9, putative\tLmjF19.0180\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0190\tmbf1\t\tGO:0003677\tGO_REF:0000002\tISM\tPfam:PF01381\tF\tmultiprotein-bridging factor 1, putative\tLmjF19.0190\tmRNA\ttaxon:347515\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0190\tmbf1\t\tGO:0003713\tGO_REF:0000002\tISS\tUniProtKB:MBF1_YEAST\tF\tmultiprotein-bridging 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0190\tmbf1\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14810\tP\tmultiprotein-bridging factor 1, putative\tLmjF19.0190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0190\tmbf1\t\tGO:0045944\tGO_REF:0000002\tISS\tUniProtKB:MBF1_YEAST\tP\tmultiprotein-bridging factor 1, putative\tLmjF19.0190\tmRNA\ttaxon:347515\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0240\tLmjF.19.0240\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14870\tC\thypothetical protein, conserved\tLmjF19.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0250\tCEP104\t\tGO:0097542\tGO_REF:0000024\tISO\tGeneDB:LmxM.19.0250\tC\tcentrosomal protein of 104 kDa\tLmjF19.0250\tmRNA\ttaxon:347515\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0330\tIFT80\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14990\tP\tintraflagellar transport protein 80, putative\tLmjF19.0330\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0350\tLmjF.19.0350\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15010\tC\tlipoic acid synthetase, mitochondrial precursor, putative\tLmjF19.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0350\tLmjF.19.0350\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15010\tC\tlipoic acid synthetase, mitochondrial precursor, putative\tLmjF19.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0360\tLmjF.19.0360\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15020\tC\tCMGC/DYRK protein kinase, putative\tLmjF19.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0360\tLmjF.19.0360\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15020\tC\tCMGC/DYRK protein kinase, putative\tLmjF19.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0360\tLmjF.19.0360\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15020\tP\tCMGC/DYRK protein kinase, putative\tLmjF19.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0360\tLmjF.19.0360\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15020\tP\tCMGC/DYRK protein kinase, putative\tLmjF19.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0360\tLmjF.19.0360\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15020\tC\tCMGC/DYRK protein kinase, putative\tLmjF19.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0380\tLmjF.19.0380\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15080\tC\thypothetical protein, conserved\tLmjF19.0380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0390\tLmjF.19.0390\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15120\tC\t40S ribosomal protein S13, putative\tLmjF19.0390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0400\tSEC22\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15130\tC\tVesicle-trafficking protein SEC22, putative\tLmjF19.0400|SLY2\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0400\tSEC22\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15130\tC\tVesicle-trafficking protein SEC22, putative\tLmjF19.0400|SLY2\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0400\tSEC22\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15130\tC\tVesicle-trafficking protein SEC22, putative\tLmjF19.0400|SLY2\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0410\tLmjF.19.0410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15140\tC\tproteasome maturation factor UMP1, putative\tLmjF19.0410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0420\tRPC11\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR001222\tF\tDNA-directed RNA polymerase III subunit C11, putative\tLmjF19.0420\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0420\tRPC11\t\tGO:0003700\tGO_REF:0000011\tISM\tInterPro:IPR001222\tF\tDNA-directed RNA polymerase III subunit C11, putative\tLmjF19.0420\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0420\tRPC11\t\tGO:0003899\tGO_REF:0000012\tISA\tUniProtKB:Q04307\tF\tDNA-directed RNA polymerase III subunit C11, putative\tLmjF19.0420\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0420\tRPC11\t\tGO:0006354\tGO_REF:0000011\tISM\tInterPro:IPR001222\tP\tDNA-directed RNA polymerase III subunit C11, putative\tLmjF19.0420\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0420\tRPC11\t\tGO:0006355\tGO_REF:0000011\tISM\tInterPro:IPR001222\tP\tDNA-directed RNA polymerase III subunit C11, putative\tLmjF19.0420\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0430\tLmjF.19.0430\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15160\tC\thypothetical protein, conserved\tLmjF19.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0440\tLmjF.19.0440\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15180\tC\tnucleosome assembly protein, putative\tLmjF19.0440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0450\tLmjF.19.0450\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15190\tC\thypothetical protein, conserved\tLmjF19.0450\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0460\tLmjF.19.0460\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15200\tC\tPredicted coiled-coil domain-containing protein (DUF2360), putative\tLmjF19.0460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0460\tLmjF.19.0460\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15200\tC\tPredicted coiled-coil domain-containing protein (DUF2360), putative\tLmjF19.0460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0460\tLmjF.19.0460\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15200\tC\tPredicted coiled-coil domain-containing protein (DUF2360), putative\tLmjF19.0460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0470\tCBP30\t\tGO:0005634\tPMID:15743819|GO_REF:0000024\tISO\tGeneDB:Tb927.10.15210\tC\tnuclear cap binding complex subunit CBP30, putative\tLmjF19.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0470\tCBP30\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15210\tC\tnuclear cap binding complex subunit CBP30, putative\tLmjF19.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0470\tCBP30\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15210\tC\tnuclear cap binding complex subunit CBP30, putative\tLmjF19.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0470\tCBP30\t\tGO:0005846\tPMID:15743819|GO_REF:0000024\tISO\tGeneDB:Tb927.10.15210\tC\tnuclear cap binding complex subunit CBP30, putative\tLmjF19.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0490\tLmjF.19.0490\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15220\tC\thypothetical protein, conserved\tLmjF19.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0490\tLmjF.19.0490\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15220\tC\thypothetical protein, conserved\tLmjF19.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0490\tLmjF.19.0490\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15220\tC\thypothetical protein, conserved\tLmjF19.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0520\tLmjF.19.0520\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15250\tC\thypothetical protein, conserved\tLmjF19.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0530\tLmjF.19.0530\t\tGO:0060170\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15260\tC\thypothetical protein, conserved\tLmjF19.0530\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0550\tLmjF.19.0550\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15270\tC\tmetallo- peptidase, Clan MG, Family M24\tLmjF19.0550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0550\tLmjF.19.0550\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15270\tC\tmetallo- peptidase, Clan MG, Family M24\tLmjF19.0550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0590\tLmjF.19.0590\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15300\tC\tCalcium/calmodulin-dependent protein kinase kinase, putative\tLmjF19.0590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0610\tLmjF.19.0610\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15320\tC\thypothetical protein, conserved\tLmjF19.0610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0610\tLmjF.19.0610\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15320\tC\thypothetical protein, conserved\tLmjF19.0610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0610\tLmjF.19.0610\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15320\tP\thypothetical protein, conserved\tLmjF19.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0630\tH3V\t\tGO:0000781\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15350\tC\thistone H3 variant V\tLmjF19.0630\tmRNA\ttaxon:347515\t20100324\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0630\tH3V\t\tGO:0003677\tGO_REF:0000011\tISM\tInterPro:IPR000164\tF\thistone H3 variant V\tLmjF19.0630\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0630\tH3V\t\tGO:0005634\tGO_REF:0000011\tISM\tInterPro:IPR000164\tC\thistone H3 variant V\tLmjF19.0630\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0630\tH3V\t\tGO:0006369\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15350\tP\thistone H3 variant V\tLmjF19.0630\tmRNA\ttaxon:347515\t20100331\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0630\tH3V\t\tGO:0051276\tGO_REF:0000011\tISM\tInterPro:IPR000164\tP\thistone H3 variant V\tLmjF19.0630\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { 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"TriTrypDB\tLmjF.19.0680\tFAZ7\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\tLmjF19.0680\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0680\tFAZ7\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15390\tC\tkinesin, putative\tLmjF19.0680\tmRNA\ttaxon:347515\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0680\tFAZ7\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin, putative\tLmjF19.0680\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0690\tFAZ7\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin, putative\tLmjF19.0690\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0690\tFAZ7\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15390\tC\tkinesin, putative\tLmjF19.0690\tmRNA\ttaxon:347515\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0690\tFAZ7\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin, 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0710\tgMDH\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15410\tC\tglycosomal malate dehydrogenase\tLmjF19.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0710\tgMDH\t\tGO:0016491\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15410\tF\tglycosomal malate dehydrogenase\tLmjF19.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0710\tgMDH\t\tGO:0016615\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15410\tF\tglycosomal malate dehydrogenase\tLmjF19.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0710\tgMDH\t\tGO:0020015\tPMID:16750864|GO_REF:0000024\tISO\tGeneDB:Tb927.10.15410\tC\tglycosomal malate dehydrogenase\tLmjF19.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0710\tgMDH\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15410\tC\tglycosomal malate dehydrogenase\tLmjF19.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0740\tLmjF.19.0740\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15460\tC\tVacuolar protein sorting protein 36 Vps36/EAP30/Vps36 family, putative\tLmjF19.0740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0750\tLmjF.19.0750\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15470\tC\thypothetical protein, conserved\tLmjF19.0750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0770\tLmjF.19.0770\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15500\tC\tSNARE protein, putative\tLmjF19.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0770\tLmjF.19.0770\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15500\tC\tSNARE protein, putative\tLmjF19.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0770\tLmjF.19.0770\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15500\tC\tSNARE protein, putative\tLmjF19.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0770\tLmjF.19.0770\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15500\tC\tSNARE protein, putative\tLmjF19.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0780\tLmjF.19.0780\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15510\tC\thypothetical protein, conserved\tLmjF19.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0780\tLmjF.19.0780\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15510\tC\thypothetical protein, conserved\tLmjF19.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0790\tLmjF.19.0790\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15520\tC\tsignal recognition particle protein, putative\tLmjF19.0790\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0800\tABCF2\t\tGO:0000056\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.15530\tP\tABC transport system ATP-binding protein, putative\tLmjF19.0800\tmRNA\ttaxon:347515\t20120807\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0800\tABCF2\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\tABC transport system ATP-binding protein, putative\tLmjF19.0800\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0800\tABCF2\t\tGO:0006810\tGO_REF:0000002\tISS\t\tP\tABC transport system ATP-binding protein, 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0800\tABCF2\t\tGO:0042624\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.15530\tF\tABC transport system ATP-binding protein, putative\tLmjF19.0800\tmRNA\ttaxon:347515\t20120807\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0800\tABCF2\t\tGO:0090069\tPMID:16260602\tISO\tGeneDB:Tb927.10.15530\tP\tABC transport system ATP-binding protein, putative\tLmjF19.0800\tmRNA\ttaxon:347515\t20120807\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1000\tLmjF.19.1000\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15910\tC\tglycerol 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1000\tLmjF.19.1000\t\tGO:0019563\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tP\tglycerol uptake protein, putative\tLmjF19.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1010\tLmjF.19.1010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15640\tC\tWD domain, G-beta repeat, putative\tLmjF19.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1020\tLmjF.19.1020\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15650\tC\ttRNA pseudouridine synthase A-like protein\tLmjF19.1020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1030\tLmjF.19.1030\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2350\tC\thypothetical protein, conserved\tLmjF19.1030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1040\tLmjF.19.1040\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2360\tC\tphenylalanyl-tRNA synthetase, putative\tLmjF19.1040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1080\tLmjF.19.1080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15680\tC\thypothetical protein, conserved\tLmjF19.1080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1110\tLmjF.19.1110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15710\tC\tmitochondrial carrier protein, putative\tLmjF19.1110\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1110\tLmjF.19.1110\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15710\tC\tmitochondrial carrier protein, putative\tLmjF19.1110\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1120\tRPN9\t\tGO:0004175\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15720\tF\tproteasome regulatory non-ATP-ase subunit 9, putative\tLmjF19.1120\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1120\tRPN9\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15720\tC\tproteasome regulatory non-ATP-ase subunit 9, putative\tLmjF19.1120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1120\tRPN9\t\tGO:0005838\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15720\tC\tproteasome regulatory non-ATP-ase subunit 9, putative\tLmjF19.1120\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1120\tRPN9\t\tGO:0006511\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15720\tP\tproteasome regulatory non-ATP-ase subunit 9, putative\tLmjF19.1120\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1130\tLmjF.19.1130\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15730\tC\thypothetical protein, conserved\tLmjF19.1130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1130\tLmjF.19.1130\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15730\tC\thypothetical protein, conserved\tLmjF19.1130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1150\tLmjF.19.1150\t\tGO:0036064\tPMID:20300570\tISO\tGeneDB:Tb927.10.15750\tC\thypothetical protein, conserved\tLmjF19.1150\tmRNA\ttaxon:347515\t20110223\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1150\tLmjF.19.1150\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15750\tC\thypothetical protein, conserved\tLmjF19.1150\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1160\tLmjF.19.1160\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15760\tP\thypothetical protein, conserved\tLmjF19.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1190\tLmjF.19.1190\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15790\tC\tCHCH domain containing protein, putative\tLmjF19.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1200\tLmjF.19.1200\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15800\tC\tactin-related protein 2, putative\tLmjF19.1200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1210\tLmjF.19.1210\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15810\tC\tFcf1, putative\tLmjF19.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1250\tPEX12\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15850\tC\tperoxin 12, putative\tLmjF19.1250\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1250\tPEX12\t\tGO:0016021\tPMID:17188680|GO_REF:0000024\tISO\tGeneDB:Tb927.10.15850\tC\tperoxin 12, putative\tLmjF19.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1250\tPEX12\t\tGO:0020015\tPMID:17188680|GO_REF:0000024\tISO\tGeneDB:Tb927.10.15850\tC\tperoxin 12, putative\tLmjF19.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1250\tPEX12\t\tGO:0046860\tPMID:17188680|GO_REF:0000024\tISO\tGeneDB:Tb927.10.15850\tC\tperoxin 12, putative\tLmjF19.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1260\tLmjF.19.1260\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15860\tC\thypothetical protein, conserved\tLmjF19.1260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1270\tLmjF.19.1270\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15870\tC\tRNA binding protein, putative\tLmjF19.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1270\tLmjF.19.1270\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15870\tC\tRNA binding protein, putative\tLmjF19.1270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1320\tLmjF.19.1320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15910\tC\tglycerol uptake protein, putative\tLmjF19.1320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1320\tLmjF.19.1320\t\tGO:0006506\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tP\tglycerol uptake protein, putative\tLmjF19.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1320\tLmjF.19.1320\t\tGO:0008374\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tF\tglycerol uptake protein, putative\tLmjF19.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1320\tLmjF.19.1320\t\tGO:0019563\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tP\tglycerol uptake protein, putative\tLmjF19.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1330\tLmjF.19.1330\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15910\tC\tglycerol 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1345\tLmjF.19.1345\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15910\tC\tglycerol uptake protein, putative\tLmjF19.1345\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1345\tLmjF.19.1345\t\tGO:0006506\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tP\tglycerol uptake protein, putative\tLmjF19.1345\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1345\tLmjF.19.1345\t\tGO:0008374\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tF\tglycerol uptake protein, putative\tLmjF19.1345\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1345\tLmjF.19.1345\t\tGO:0019563\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tP\tglycerol uptake protein, putative\tLmjF19.1345\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1347\tLmjF.19.1347\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15910\tC\tmembrane-bound O-acyltransferase, 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1347\tLmjF.19.1347\t\tGO:0019563\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tP\tmembrane-bound O-acyltransferase, putative\tLmjF19.1347\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1390\tTBP\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15950\tC\tTATA-box-binding protein\tLmjF19.1390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1390\tTBP\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15950\tC\tTATA-box-binding protein\tLmjF19.1390\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1390\tTBP\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15950\tC\tTATA-box-binding protein\tLmjF19.1390\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1400\tLmjF.19.1400\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.15960\tC\thypothetical protein, conserved\tLmjF19.1400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1440\tMPK4\t\tGO:0004672\tGO_REF:0000024\tISO\tGeneDB:LmxM.19.1440\tF\tmitogen-activated protein kinase 4\tLmjF19.1440\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1440\tMPK4\t\tGO:0006468\tGO_REF:0000024\tISO\tGeneDB:LmxM.19.1440\tP\tmitogen-activated protein kinase 4\tLmjF19.1440\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1500\tEIF4E2\t\tGO:0003743\tPMID:15694484\tISA\tEMBL:Q04637\tF\tEukaryotic translation initiation factor 4E-2\tLmjF19.1500\tmRNA\ttaxon:347515\t20100326\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1500\tEIF4E2\t\tGO:0006413\tPMID:15694484\tISA\tEMBL:Q04637\tP\tEukaryotic translation initiation factor 4E-2\tLmjF19.1500\tmRNA\ttaxon:347515\t20100326\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1505\tLmjF.19.1505\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.16080\tC\thypothetical protein, 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RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1530\tLmjF.19.1530\t\tGO:0031072\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.16100\tF\tFK506-binding protein (FKBP)-type peptidyl-prolyl isomerase, putative\tLmjF19.1530\tmRNA\ttaxon:347515\t20120823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1550\tLmjF.19.1550\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.16110\tP\tWD domain, G-beta repeat, putative\tLmjF19.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF19.1620\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1620\tLmjF.19.1620\t\tGO:0005739\tPMID:15223320\tISM\t\tC\tpotassium voltage-gated channel, putative\tLmjF19.1620\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1620\tLmjF.19.1620\t\tGO:0006813\tGO_REF:0000011\tISM\tInterPro:IPR003131\tP\tpotassium voltage-gated channel, putative\tLmjF19.1620\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1620\tLmjF.19.1620\t\tGO:0008076\tGO_REF:0000011\tISM\tInterPro:IPR003131\tC\tpotassium voltage-gated channel, putative\tLmjF19.1620\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1620\tLmjF.19.1620\t\tGO:0015272\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511301.140\tF\tpotassium voltage-gated channel, putative\tLmjF19.1620\tmRNA\ttaxon:347515\t20120823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1620\tLmjF.19.1620\t\tGO:0016020\tGO_REF:0000011\tISM\tInterPro:IPR003131\tC\tpotassium voltage-gated channel, putative\tLmjF19.1620\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1630\tATG8\t\tGO:0010506\tPMID:19066473\tIGI\t\tP\tATG8/AUT7/APG8/PAZ2, putative\tLmjF19.1630\tmRNA\ttaxon:347515\t20090828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0010\tLmjF.20.0010\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.540\tC\tDNA-directed RNA polymerase III, putative\tLmjF20.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0020\tLmjF.20.0020\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.560\tC\tWD domain, G-beta repeat, putative\tLmjF20.0020\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0020\tLmjF.20.0020\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.560\tC\tWD domain, G-beta repeat, putative\tLmjF20.0020\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0030\tDOT1B\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.570\tC\tHistone-lysine N-methyltransferase, H3 lysine-76 specific\tLmjF20.0030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0030\tDOT1B\t\tGO:0018024\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.570\tF\tHistone-lysine N-methyltransferase, H3 lysine-76 specific\tLmjF20.0030\tmRNA\ttaxon:347515\t20090717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0030\tDOT1B\t\tGO:0020033\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.570\tP\tHistone-lysine N-methyltransferase, H3 lysine-76 specific\tLmjF20.0030\tmRNA\ttaxon:347515\t20090717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0030\tDOT1B\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.570\tC\tHistone-lysine N-methyltransferase, H3 lysine-76 specific\tLmjF20.0030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0030\tDOT1B\t\tGO:0051726\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.570\tP\tHistone-lysine N-methyltransferase, H3 lysine-76 specific\tLmjF20.0030\tmRNA\ttaxon:347515\t20090717\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0050\tASF1A\t\tGO:0003682\tGO_REF:0000024\tISA\tUniProtKB:Q9Y294\tF\tAnti-silencing function protein 1 homolog A\tLmjF20.0050\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0050\tASF1A\t\tGO:0005634\tGO_REF:0000024\tISA\tUniProtKB:Q9Y294\tC\tAnti-silencing function protein 1 homolog A\tLmjF20.0050\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0050\tASF1A\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.630\tC\tAnti-silencing function protein 1 homolog A\tLmjF20.0050\tmRNA\ttaxon:347515\t20160727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0050\tASF1A\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.630\tC\tAnti-silencing function protein 1 homolog A\tLmjF20.0050\tmRNA\ttaxon:347515\t20160727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0050\tASF1A\t\tGO:0031936\tGO_REF:0000024\tISA\tUniProtKB:Q9Y294\tP\tAnti-silencing function protein 1 homolog A\tLmjF20.0050\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0050\tASF1A\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.630\tC\tAnti-silencing function protein 1 homolog A\tLmjF20.0050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0050\tASF1A\t\tGO:0042393\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.630\tF\tAnti-silencing function protein 1 homolog A\tLmjF20.0050\tmRNA\ttaxon:347515\t20160727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0050\tASF1A\t\tGO:0060968\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.630\tP\tAnti-silencing function protein 1 homolog A\tLmjF20.0050\tmRNA\ttaxon:347515\t20160727\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0060\tLmjF.20.0060\t\tGO:0003684\tPMID:18430140|GO_REF:0000024\tISO\tGeneDB:Tb927.1.640\tF\tDNA repair protein BRCA2, putative\tLmjF20.0060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0060\tLmjF.20.0060\t\tGO:0005634\tPMID:18430140|GO_REF:0000024\tISO\tGeneDB:Tb927.1.640\tC\tDNA repair protein BRCA2, putative\tLmjF20.0060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0060\tLmjF.20.0060\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.640\tC\tDNA repair protein BRCA2, putative\tLmjF20.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0060\tLmjF.20.0060\t\tGO:0020033\tPMID:18430140|GO_REF:0000024\tISO\tGeneDB:Tb927.1.640\tP\tDNA repair protein BRCA2, putative\tLmjF20.0060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0070\tLmjF.20.0070\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.650\tC\thypothetical protein, conserved\tLmjF20.0070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0070\tLmjF.20.0070\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.650\tC\thypothetical protein, conserved\tLmjF20.0070\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0080\tLmjF.20.0080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.670\tC\thypothetical protein, conserved\tLmjF20.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0080\tLmjF.20.0080\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.670\tP\thypothetical protein, conserved\tLmjF20.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0100\tPGKC\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.710\tC\tphosphoglycerate kinase C, glycosomal\tLmjF20.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0100\tPGKC\t\tGO:0020015\tPMID:9497041\tEXP\t\tC\tphosphoglycerate kinase C, glycosomal\tLmjF20.0100\tmRNA\ttaxon:347515\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0100\tPGKC\t\tGO:0043531\tPMID:9497041\tEXP\t\tF\tphosphoglycerate kinase C, glycosomal\tLmjF20.0100\tmRNA\ttaxon:347515\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0100\tPGKC\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.710\tC\tphosphoglycerate kinase C, glycosomal\tLmjF20.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0110\tPGKB\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.710\tC\tphosphoglycerate kinase B, cytosolic\tLmjF20.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0110\tPGKB\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.710\tC\tphosphoglycerate kinase B, cytosolic\tLmjF20.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0110\tPGKB\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.710\tC\tphosphoglycerate kinase B, cytosolic\tLmjF20.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0110\tPGKB\t\tGO:0005829\tPMID:9497041\tEXP\t\tC\tphosphoglycerate kinase B, cytosolic\tLmjF20.0110\tmRNA\ttaxon:347515\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0110\tPGKB\t\tGO:0043531\tPMID:9497041\tEXP\t\tF\tphosphoglycerate kinase B, cytosolic\tLmjF20.0110\tmRNA\ttaxon:347515\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0110\tPGKB\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.710\tC\tphosphoglycerate kinase B, cytosolic\tLmjF20.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0120\tLmjF.20.0120\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.730\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF20.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0120\tLmjF.20.0120\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.730\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF20.0120\tmRNA\ttaxon:347515\t20140725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0130\tLmjF.20.0130\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.740\tC\tphosphatidylinositol-4-phosphate 5-kinase related\tLmjF20.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0130\tLmjF.20.0130\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.740\tC\tphosphatidylinositol-4-phosphate 5-kinase related\tLmjF20.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0160\tLmjF.20.0160\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.760\tC\twd40 repeat domain-containing protein\tLmjF20.0160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0210\tLmjF.20.0210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.820\tC\tkelch domain-containing 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0270\tLmjF.20.0270\t\tGO:0005516\tGO_REF:0000050\tISM\tInterPro:IPR026150\tF\tEnkuring domain-containig protein\tLmjF20.0270\tmRNA\ttaxon:347515\t20140730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0270\tLmjF.20.0270\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.990\tC\tEnkuring domain-containig protein\tLmjF20.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0290\tLmjF.20.0290\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1010\tC\tE3 ubiquitin-protein ligase KCMF1, putative\tLmjF20.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0290\tLmjF.20.0290\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1010\tC\tE3 ubiquitin-protein ligase KCMF1, putative\tLmjF20.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0290\tLmjF.20.0290\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1010\tC\tE3 ubiquitin-protein ligase KCMF1, putative\tLmjF20.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0300\tLmjF.20.0300\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1020\tC\tleucine-rich repeat-containing protein\tLmjF20.0300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0320\tNOP49\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1030\tC\tNucleolar protein 49, putative\tLmjF20.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0320\tNOP49\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1030\tC\tNucleolar 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domain-containing protein\tLmjF20.0346\tmRNA\ttaxon:347515\t20140806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0370\tLmjF.20.0370\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1050\tC\tMetallo-dependent phosphatase-like domain-containing protein\tLmjF20.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0370\tLmjF.20.0370\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1050\tC\tMetallo-dependent phosphatase-like domain-containing protein\tLmjF20.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0375\tLmjF.20.0375\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1050\tC\tMetallo-dependent phosphatase-like domain-containing protein\tLmjF20.0375\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0375\tLmjF.20.0375\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1050\tC\tMetallo-dependent phosphatase-like domain-containing protein\tLmjF20.0375\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0390\tLmjF.20.0390\t\tGO:0004529\tGO_REF:0000050\tISM\tPANTHER:PTHR10870\tF\tCell cycle checkpoint protein RAD1-like, putative\tLmjF20.0390\tmRNA\ttaxon:347515\t20140731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0390\tLmjF.20.0390\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1060\tC\tCell cycle checkpoint protein RAD1-like, putative\tLmjF20.0390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0390\tLmjF.20.0390\t\tGO:0006281\tGO_REF:0000050\tISM\tPANTHER:PTHR10870\tP\tCell cycle checkpoint protein RAD1-like, 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"TriTrypDB\tLmjF.20.0420\tRRP8\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1120\tC\tribosomal RNA-processing protein 8, putative\tLmjF20.0420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0420\tRRP8\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1120\tC\tribosomal RNA-processing protein 8, putative\tLmjF20.0420\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0420\tRRP8\t\tGO:0008168\tGO_REF:0000011\tISM\tInterPro:IPR007823\tF\tribosomal RNA-processing protein 8, putative\tLmjF20.0420\tmRNA\ttaxon:347515\t20140731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0460\tLmjF.20.0460\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1140\tC\tTransmembrane protein 231, putative\tLmjF20.0460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0460\tLmjF.20.0460\t\tGO:0032880\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tP\tTransmembrane protein 231, putative\tLmjF20.0460\tmRNA\ttaxon:347515\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0460\tLmjF.20.0460\t\tGO:0035869\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tC\tTransmembrane protein 231, putative\tLmjF20.0460\tmRNA\ttaxon:347515\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0460\tLmjF.20.0460\t\tGO:0060170\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tC\tTransmembrane protein 231, putative\tLmjF20.0460\tmRNA\ttaxon:347515\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0460\tLmjF.20.0460\t\tGO:0060271\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tP\tTransmembrane protein 231, putative\tLmjF20.0460\tmRNA\ttaxon:347515\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0470\tLmjF.20.0470\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1150\tC\tzeta tubulin, putative\tLmjF20.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0480\tKRIPP3\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1160\tC\tkinetoplast ribosomal PPR-repeat containing protein 3, putative\tLmjF20.0480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0480\tKRIPP3\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1160\tC\tkinetoplast ribosomal PPR-repeat containing protein 3, putative\tLmjF20.0480\tmRNA\ttaxon:347515\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0490\tLmjF.20.0490\t\tGO:0003677\tPMID:16962183\tISO\tGeneDB:Tb927.1.1170\tF\tDNA-directed RNA polymerase 2, RPB12 subunit, putative\tLmjF20.0490\tmRNA\ttaxon:347515\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0490\tLmjF.20.0490\t\tGO:0003899\tPMID:16962183\tISO\tGeneDB:Tb927.1.1170\tF\tDNA-directed RNA polymerase 2, RPB12 subunit, putative\tLmjF20.0490\tmRNA\ttaxon:347515\t20090603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0490\tLmjF.20.0490\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1170\tC\tDNA-directed RNA polymerase 2, RPB12 subunit, putative\tLmjF20.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0490\tLmjF.20.0490\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1170\tC\tDNA-directed RNA polymerase 2, RPB12 subunit, putative\tLmjF20.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0490\tLmjF.20.0490\t\tGO:0006351\tPMID:16962183\tISO\tGeneDB:Tb927.1.1170\tP\tDNA-directed RNA polymerase 2, RPB12 subunit, putative\tLmjF20.0490\tmRNA\ttaxon:347515\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0510\tMRPS15\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1200\tC\tSSU ribosomal protein, mitochondrial, putative\tLmjF20.0510\tmRNA\ttaxon:347515\t20140801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0530\tLmjF.20.0530\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1210\tC\tconserved protein, unknown function\tLmjF20.0530\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0540\tLmjF.20.0540\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1220\tC\tRWD domain-containing protein\tLmjF20.0540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0540\tLmjF.20.0540\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1220\tC\tRWD domain-containing protein\tLmjF20.0540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0550\tJ47\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1230\tC\tchaperone protein DNAJ-like protein\tLmjF20.0550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0560\tLmjF.20.0560\t\tGO:0003883\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.1.1240|GeneDB:GeneDB:Tb927.1.1240\tF\tcytidine triphosphate synthase, putative\tLmjF20.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0560\tLmjF.20.0560\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1240\tC\tcytidine triphosphate synthase, putative\tLmjF20.0560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0560\tLmjF.20.0560\t\tGO:0006241\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.1.1240|GeneDB:GeneDB:Tb927.1.1240\tP\tcytidine triphosphate synthase, putative\tLmjF20.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0560\tLmjF.20.0560\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1240\tC\tcytidine triphosphate synthase, putative\tLmjF20.0560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0590\tLmjF.20.0590\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1310\tC\thypothetical protein, conserved\tLmjF20.0590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0600\tLmjF.20.0600\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1330\tC\thypothetical protein, conserved\tLmjF20.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0600\tLmjF.20.0600\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1330\tC\thypothetical protein, conserved\tLmjF20.0600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0600\tLmjF.20.0600\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1330\tC\thypothetical protein, conserved\tLmjF20.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0600\tLmjF.20.0600\t\tGO:0006351\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1330\tP\thypothetical protein, conserved\tLmjF20.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0600\tLmjF.20.0600\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1330\tC\thypothetical protein, conserved\tLmjF20.0600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0600\tLmjF.20.0600\t\tGO:0050265\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1330\tF\thypothetical protein, conserved\tLmjF20.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0600\tLmjF.20.0600\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1330\tC\thypothetical protein, conserved\tLmjF20.0600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0620\tLmjF.20.0620\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1340\tC\tQuinonprotein alcohol dehydrogenase-like protein, putative\tLmjF20.0620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0640\tLmjF.20.0640\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1350\tC\tkinesin heavy chain, putative\tLmjF20.0640\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0640\tLmjF.20.0640\t\tGO:0005871\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1350\tC\tkinesin heavy chain, putative\tLmjF20.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0650\tLmjF.20.0650\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1370\tC\trRNA biogenesis protein-like protein\tLmjF20.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0650\tLmjF.20.0650\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1370\tC\trRNA biogenesis protein-like protein\tLmjF20.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0660\tLmjF.20.0660\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1380\tC\tserine/threonine protein phosphatase 2A regulatory subunit, putative\tLmjF20.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0660\tLmjF.20.0660\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1380\tC\tserine/threonine protein phosphatase 2A regulatory subunit, putative\tLmjF20.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0660\tLmjF.20.0660\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1380\tC\tserine/threonine protein phosphatase 2A regulatory subunit, putative\tLmjF20.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0660\tLmjF.20.0660\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1380\tC\tserine/threonine protein phosphatase 2A regulatory subunit, putative\tLmjF20.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0670\tLmjF.20.0670\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1390\tC\thypothetical protein, conserved\tLmjF20.0670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0690\tLmjF.20.0690\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1420\tC\thypothetical protein, conserved\tLmjF20.0690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0700\tLmjF.20.0700\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1470\tC\tconserved protein, unknown function\tLmjF20.0700\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0700\tLmjF.20.0700\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1470\tP\tconserved protein, unknown function\tLmjF20.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0705\tLmjF.20.0705\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1500\tF\tconserved protein, unknown function\tLmjF20.0705\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0705\tLmjF.20.0705\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1500\tC\tconserved protein, unknown function\tLmjF20.0705\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0770\tLmjF.20.0770\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1530\tC\tSTE group serine/threonine-protein kinase, putative\tLmjF20.0770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0770\tLmjF.20.0770\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tSTE group serine/threonine-protein kinase, putative\tLmjF20.0770\tmRNA\ttaxon:347515\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0780\tLmjF.20.0780\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1540\tC\tTubulin/FtsZ family, putative\tLmjF20.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0780\tLmjF.20.0780\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1540\tC\tTubulin/FtsZ family, putative\tLmjF20.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0780\tLmjF.20.0780\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1540\tC\tTubulin/FtsZ family, putative\tLmjF20.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0840\tLmjF.20.0840\t\tGO:0005507\tGO_REF:0000012\tISA\tUniProtKB:SCO2_HUMAN\tF\tcytochrome c oxidase assembly factor, putative\tLmjF20.0840\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0840\tLmjF.20.0840\t\tGO:0005739\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.1.1580|UniProtKB:SCO2_HUMAN\tC\tcytochrome c oxidase assembly factor, putative\tLmjF20.0840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0840\tLmjF.20.0840\t\tGO:0008535\tGO_REF:0000012\tISA\tUniProtKB:SCO2_HUMAN\tP\tcytochrome c oxidase assembly factor, putative\tLmjF20.0840\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0850\tLmjF.20.0850\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1600\tC\tpseudouridine synthase TruD, putative\tLmjF20.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0850\tLmjF.20.0850\t\tGO:0006399\tGO_REF:0000050\tISM\tPANTHER:PTHR13326\tP\tpseudouridine synthase TruD, putative\tLmjF20.0850\tmRNA\ttaxon:347515\t20140805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0860\tLmjF.20.0860\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1610\tC\thypothetical protein, conserved\tLmjF20.0860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0860\tLmjF.20.0860\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1610\tC\thypothetical protein, conserved\tLmjF20.0860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0860\tLmjF.20.0860\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1610\tC\thypothetical protein, conserved\tLmjF20.0860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0870\tLmjF.20.0870\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1620\tC\tATP-dependent RNA helicase, putative\tLmjF20.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0890\tLmjF.20.0890\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1680\tC\tTranscription elongation factor 1 domain-containing protein\tLmjF20.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0890\tLmjF.20.0890\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1680\tC\tTranscription elongation factor 1 domain-containing protein\tLmjF20.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0890\tLmjF.20.0890\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1680\tC\tTranscription elongation factor 1 domain-containing protein\tLmjF20.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0900\tKREN1\t\tGO:0004521\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1690\tF\tRNA editing endoribonuclease\tLmjF20.0900|MP90|KREPB1|REN1\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0900\tKREN1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1690\tC\tRNA editing endoribonuclease\tLmjF20.0900|MP90|KREPB1|REN1\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0900\tKREN1\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1690\tC\tRNA editing endoribonuclease\tLmjF20.0900|MP90|KREPB1|REN1\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0900\tKREN1\t\tGO:0008270\tPMID:16611942\tISO\tGeneDB:Tb927.1.1690\tF\tRNA editing endoribonuclease\tLmjF20.0900|MP90|KREPB1|REN1\tmRNA\ttaxon:347515\t20110628\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0900\tKREN1\t\tGO:0016556\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1690\tP\tRNA editing endoribonuclease\tLmjF20.0900|MP90|KREPB1|REN1\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0920\tLmjF.20.0920\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1700\tC\tAATF protein, putative\tLmjF20.0920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0920\tLmjF.20.0920\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1700\tC\tAATF protein, putative\tLmjF20.0920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0930\tLmjF.20.0930\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1710\tC\ttransmembrane protein, conserved\tLmjF20.0930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0940\tCYP15\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1720\tC\tcyclophilin 15, putative\tLmjF20.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0950\tLmjF.20.0950\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1730\tC\tconserved protein, unknown function\tLmjF20.0950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0970\tLmjF.20.0970\t\tGO:0005829\tPMID:18364711\tRCA\t\tC\t1,2-Dihydroxy-3-keto-5-methylthiopentene dioxygenase, putative\tLmjF20.0970\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1080\tLmjF.20.1080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1880\tC\tWD40 repeat-containing protein\tLmjF20.1080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1090\tLmjF.20.1090\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1890\tC\thypothetical protein, conserved\tLmjF20.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1090\tLmjF.20.1090\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1890\tC\thypothetical protein, conserved\tLmjF20.1090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1100\tLmjF.20.1100\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1910\tC\tMORN repeat-containing protein\tLmjF20.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1120\tTOR4\t\tGO:0008283\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.1930\tP\tphosphatidylinositol 3-kinase, putative\tLmjF20.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1120\tTOR4\t\tGO:0016303\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.1.1930\tF\tphosphatidylinositol 3-kinase, putative\tLmjF20.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1120\tTOR4\t\tGO:0046854\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.1.1930\tP\tphosphatidylinositol 3-kinase, putative\tLmjF20.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1130\tJ16\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1960\tC\tDNAj-like protein\tLmjF20.1130\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1130\tJ16\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.1960\tC\tDNAj-like protein\tLmjF20.1130\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1140\tLmjF.20.1140\t\tGO:0005789\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\tLmjF20.1140\tmRNA\ttaxon:347515\t20140812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1140\tLmjF.20.1140\t\tGO:0006888\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tP\tprotein transport protein YIF1, putative\tLmjF20.1140\tmRNA\ttaxon:347515\t20140812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1140\tLmjF.20.1140\t\tGO:0030134\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\tLmjF20.1140\tmRNA\ttaxon:347515\t20140812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1140\tLmjF.20.1140\t\tGO:0030173\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\tLmjF20.1140\tmRNA\ttaxon:347515\t20140812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1190\tLmjF.20.1190\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2110\tC\tcysteine peptidase, Clan CA, family C2, putative\tLmjF20.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1190\tLmjF.20.1190\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2110\tC\tcysteine peptidase, Clan CA, family C2, putative\tLmjF20.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1220\tLmjF.20.1220\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2150\tC\tcalpain-like cysteine peptidase, Clan CA, family C2\tLmjF20.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1230\tLmjF.20.1230\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2160\tC\tDomain of unknown function (DUF1935), putative\tLmjF20.1230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1230\tLmjF.20.1230\t\tGO:0005886\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2160\tC\tDomain of unknown function (DUF1935), putative\tLmjF20.1230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1230\tLmjF.20.1230\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2160\tC\tDomain of unknown function (DUF1935), putative\tLmjF20.1230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1230\tLmjF.20.1230\t\tGO:0060170\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2160\tC\tDomain of unknown function (DUF1935), putative\tLmjF20.1230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1240\tLmjF.20.1240\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2190\tC\tRaptor N-terminal CASPase like domain containing protein, putative\tLmjF20.1240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1290\tLmjF.20.1290\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2210\tC\tnucleosome assembly protein (NAP), putative\tLmjF20.1290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1290\tLmjF.20.1290\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2210\tC\tnucleosome assembly protein (NAP), putative\tLmjF20.1290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1290\tLmjF.20.1290\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2210\tC\tnucleosome assembly protein (NAP), putative\tLmjF20.1290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1300\tSMP-2\t\tGO:0020018\tPMID:20086045\tIDA\t\tC\tsmall myristoylated protein-2\tLmjF20.1300\tmRNA\ttaxon:347515\t20100201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1300\tSMP-2\t\tGO:0060285\tPMID:20086045\tIMP\t\tP\tsmall myristoylated protein-2\tLmjF20.1300\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1310\tSMP1\t\tGO:0044409\tPMID:25793476\tIDA\t\tP\tsmall myristoylated protein-1\tLmjF20.1310|FLAG1\tmRNA\ttaxon:347515\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1310\tSMP1\t\tGO:0060170\tPMID:15342784\tIDA\t\tC\tsmall myristoylated protein-1\tLmjF20.1310|FLAG1\tmRNA\ttaxon:347515\t20100201\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1310\tSMP1\t\tGO:0060271\tPMID:20086045\tIMP\t\tP\tsmall myristoylated protein-1\tLmjF20.1310|FLAG1\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1320\tLmjF.20.1320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2320\tC\thypothetical protein, conserved\tLmjF20.1320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1360\tEAP1\t\tGO:0000460\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2580\tP\texosome-associated protein 1, putative\tLmjF20.1360\tmRNA\ttaxon:347515\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1360\tEAP1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2580\tC\texosome-associated protein 1, putative\tLmjF20.1360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1360\tEAP1\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2580\tC\texosome-associated protein 1, putative\tLmjF20.1360\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1365\tPUF9A\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2600\tF\tpumillio protein 9, putative\tLmjF20.1365\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1365\tPUF9A\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2600\tC\tpumillio protein 9, putative\tLmjF20.1365\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1365\tPUF9A\t\tGO:0043488\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2600\tP\tpumillio protein 9, putative\tLmjF20.1365\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1370\tPUF9B\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2600\tF\tpumilio protein 9, putative\tLmjF20.1370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1370\tPUF9B\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2600\tC\tpumilio protein 9, putative\tLmjF20.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1370\tPUF9B\t\tGO:0043488\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2600\tP\tpumilio protein 9, putative\tLmjF20.1370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1400\tPF16\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2670\tP\tparalyzed flagella protein 16\tLmjF20.1400\tmRNA\ttaxon:347515\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1400\tPF16\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2670\tC\tparalyzed flagella protein 16\tLmjF20.1400\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1400\tPF16\t\tGO:0035082\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2670\tP\tparalyzed flagella protein 16\tLmjF20.1400\tmRNA\ttaxon:347515\t20100511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1400\tPF16\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2670\tP\tparalyzed flagella protein 16\tLmjF20.1400\tmRNA\ttaxon:347515\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1400\tPF16\t\tGO:0060294\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2670\tP\tparalyzed flagella protein 16\tLmjF20.1400\tmRNA\ttaxon:347515\t20150731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1430\tLmjF.20.1430\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2730\tC\thypothetical protein, conserved\tLmjF20.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1430\tLmjF.20.1430\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2730\tC\thypothetical protein, conserved\tLmjF20.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1440\tLmjF.20.1440\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2750\tC\thypothetical protein, conserved\tLmjF20.1440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1450\tLmjF.20.1450\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2770\tC\thypothetical protein, conserved\tLmjF20.1450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1480\tLmjF.20.1480\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3300\tP\tzinc-binding phosphatase, putative\tLmjF20.1480\tmRNA\ttaxon:347515\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1500\tLmjF.20.1500\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3270\tC\thypothetical protein, conserved\tLmjF20.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1530\tLmjF.20.1530\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.3230\tC\tcell division cycle protein-like protein\tLmjF20.1530\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1550\tLmjF.20.1550\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3000\tC\tamidohydrolase, putative\tLmjF20.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1550\tLmjF.20.1550\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3000\tC\tamidohydrolase, putative\tLmjF20.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1550\tLmjF.20.1550\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3000\tC\tamidohydrolase, putative\tLmjF20.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1560\tLmjF.20.1560\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3000\tC\tamidohydrolase, putative\tLmjF20.1560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1560\tLmjF.20.1560\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3000\tC\tamidohydrolase, putative\tLmjF20.1560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1560\tLmjF.20.1560\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3000\tC\tamidohydrolase, putative\tLmjF20.1560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1570\tLmjF.20.1570\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3000\tC\tamidohydrolase, putative\tLmjF20.1570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1570\tLmjF.20.1570\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3000\tC\tamidohydrolase, putative\tLmjF20.1570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1570\tLmjF.20.1570\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3000\tC\tamidohydrolase, putative\tLmjF20.1570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1580\tLmjF.20.1580\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.2990\tC\thypothetical protein, conserved\tLmjF20.1580\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1580\tLmjF.20.1580\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2990\tC\thypothetical protein, conserved\tLmjF20.1580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1580\tLmjF.20.1580\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.2990\tC\thypothetical protein, conserved\tLmjF20.1580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1630\tLmjF.20.1630\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3220\tC\tTBC1 domain family member 20/GTPase, putative\tLmjF20.1630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1640\tSGT1\t\tGO:0000151\tGO_REF:0000012\tISA\tUniProtKB:SGT1_YEAST\tC\tSuppressor of G2 allele of SKP1, putative\tLmjF20.1640\tmRNA\ttaxon:347515\t20140818\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1640\tSGT1\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3200\tC\tSuppressor of G2 allele of SKP1, putative\tLmjF20.1640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1640\tSGT1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3200\tC\tSuppressor of G2 allele of SKP1, putative\tLmjF20.1640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1650\tLmjF.20.1650\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.3180\tC\tribosomal protein S11 homolog\tLmjF20.1650\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1650\tLmjF.20.1650\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.3180\tC\tribosomal protein S11 homolog\tLmjF20.1650\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1660\tLmjF.20.1660\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3150\tC\thypothetical protein, conserved\tLmjF20.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1680\tLmjF.20.1680\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3120\tC\tcysteine peptidase, Clan CD, family C50, putative\tLmjF20.1680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1680\tLmjF.20.1680\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3120\tC\tcysteine peptidase, Clan CD, family C50, putative\tLmjF20.1680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1690\tLmjF.20.1690\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.3110\tC\tSNAP protein, putative\tLmjF20.1690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1700\tLmjF.20.1700\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3070\tF\thypothetical protein, conserved\tLmjF20.1700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1700\tLmjF.20.1700\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3070\tC\thypothetical protein, conserved\tLmjF20.1700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1700\tLmjF.20.1700\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3070\tP\thypothetical protein, conserved\tLmjF20.1700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1710\tLmjF.20.1710\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3050\tC\ttRNA (Uracil-5-)-methyltransferase, putative\tLmjF20.1710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1720\tLmjF.20.1720\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3040\tC\thypothetical protein, conserved\tLmjF20.1720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1730\tREL2\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3030\tC\tmitochondrial RNA ligase 2\tLmjF20.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1730\tREL2\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3030\tC\tmitochondrial RNA ligase 2\tLmjF20.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1730\tREL2\t\tGO:0031019\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3030\tC\tmitochondrial RNA ligase 2\tLmjF20.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1730\tREL2\t\tGO:0045293\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3030\tC\tmitochondrial RNA ligase 2\tLmjF20.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1740\tLmjF.20.1740\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3010\tF\thypothetical protein, conserved\tLmjF20.1740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1740\tLmjF.20.1740\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.3010\tC\thypothetical protein, conserved\tLmjF20.1740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1740\tLmjF.20.1740\t\tGO:0006397\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3010\tP\thypothetical protein, conserved\tLmjF20.1740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1740\tLmjF.20.1740\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.3010\tC\thypothetical protein, conserved\tLmjF20.1740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1740\tLmjF.20.1740\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.3010\tC\thypothetical protein, conserved\tLmjF20.1740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1740\tLmjF.20.1740\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.1.3010\tC\thypothetical protein, conserved\tLmjF20.1740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0055\tLmjF.21.0055\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1840\tC\thypothetical protein, conserved\tLmjF21.0055\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0060\tLmjF.21.0060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1850\tC\tWD domain, G-beta repeat, putative\tLmjF21.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0060\tLmjF.21.0060\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1850\tC\tWD domain, G-beta repeat, putative\tLmjF21.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0120\tLmjF.21.0120\t\tGO:0004198\tGO_REF:0000011\tISM\tInterPro:IPR001300\tF\tcysteine peptidase, Clan CA, family C2, putative\tLmjF21.0120\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0120\tLmjF.21.0120\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1890\tC\tcysteine peptidase, Clan CA, family C2, putative\tLmjF21.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0120\tLmjF.21.0120\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR001300\tP\tcysteine peptidase, Clan CA, family C2, putative\tLmjF21.0120\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0125\tLmjF.21.0125\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1900\tC\tDNA topoisomerase 1A\tLmjF21.0125\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0130\tLmjF.21.0130\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tSTE/STE11 serine/threonine-protein kinase, putative\tLmjF21.0130\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0130\tLmjF.21.0130\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSTE/STE11 serine/threonine-protein kinase, putative\tLmjF21.0130\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0130\tLmjF.21.0130\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSTE/STE11 serine/threonine-protein kinase, putative\tLmjF21.0130\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0130\tLmjF.21.0130\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1910\tP\tSTE/STE11 serine/threonine-protein kinase, putative\tLmjF21.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0150\tLmjF.21.0150\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1940\tC\tCAMK/CAMKL pseudokinase, putative\tLmjF21.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0150\tLmjF.21.0150\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1940\tC\tCAMK/CAMKL pseudokinase, putative\tLmjF21.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0160\tLmjF.21.0160\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1950\tC\thypothetical protein, conserved\tLmjF21.0160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0170\tLmjF.21.0170\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1960\tC\thypothetical protein, conserved\tLmjF21.0170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0180\tLmjF.21.0180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1970\tC\tCHAT domain containing protein, putative\tLmjF21.0180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0230\tLmjF.21.0230\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2000\tC\tactin-like protein, putative\tLmjF21.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0240\tLmjF.21.0240\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2020\tC\thexokinase, putative\tLmjF21.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0250\tLmjF.21.0250\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2020\tC\thexokinase, putative\tLmjF21.0250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0280\tLmjF.21.0280\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2050\tC\thypothetical protein, conserved\tLmjF21.0280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0280\tLmjF.21.0280\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2050\tC\thypothetical protein, conserved\tLmjF21.0280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0290\tLmjF.21.0290\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2060\tC\thypothetical protein, conserved\tLmjF21.0290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0300\tLmjF.21.0300\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2070\tC\thypothetical protein, conserved\tLmjF21.0300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0310\tLmjF.21.0310\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2080\tC\thypothetical protein, conserved\tLmjF21.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0310\tLmjF.21.0310\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2080\tC\thypothetical protein, conserved\tLmjF21.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0310\tLmjF.21.0310\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2080\tC\thypothetical protein, conserved\tLmjF21.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0320\tLmjF.21.0320\t\tGO:0000395\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.2120\tP\tU1 small nuclear ribonucleoprotein C, putative\tLmjF21.0320\tmRNA\ttaxon:347515\t20120822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0320\tLmjF.21.0320\t\tGO:0003729\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.2120\tF\tU1 small nuclear ribonucleoprotein C, putative\tLmjF21.0320\tmRNA\ttaxon:347515\t20120822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0320\tLmjF.21.0320\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2120\tC\tU1 small nuclear ribonucleoprotein C, putative\tLmjF21.0320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0320\tLmjF.21.0320\t\tGO:0005685\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.2120\tC\tU1 small nuclear ribonucleoprotein C, putative\tLmjF21.0320\tmRNA\ttaxon:347515\t20120822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0320\tLmjF.21.0320\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.2120\tC\tU1 small nuclear ribonucleoprotein C, putative\tLmjF21.0320\tmRNA\ttaxon:347515\t20120822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0320\tLmjF.21.0320\t\tGO:0008270\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.2120\tF\tU1 small nuclear ribonucleoprotein C, putative\tLmjF21.0320\tmRNA\ttaxon:347515\t20120822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0350\tLmjF.21.0350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2150\tC\tProtein of unknown function, DUF607, putative\tLmjF21.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0360\tLmjF.21.0360\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2160\tC\thypothetical protein, conserved\tLmjF21.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0360\tLmjF.21.0360\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2160\tC\thypothetical protein, conserved\tLmjF21.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0370\tLmjF.21.0370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2180\tC\tRtr1/RPAP2 family, putative\tLmjF21.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0380\tLmjF.21.0380\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2190\tP\tProtein of unknown function (DUF667), putative\tLmjF21.0380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0390\tLmjF.21.0390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2200\tC\thypothetical protein, conserved\tLmjF21.0390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0400\tLmjF.21.0400\t\tGO:0004197\tGO_REF:0000011\tISM\tInterPro:IPR001394\tF\tPeptidase C19, ubiquitin carboxyl-terminal hydrolase, putative\tLmjF21.0400\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0400\tLmjF.21.0400\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001394\tP\tPeptidase C19, ubiquitin carboxyl-terminal hydrolase, 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"WARNING", "line": "TriTrypDB\tLmjF.21.0420\tLmjF.21.0420\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2230\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\tLmjF21.0420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0420\tLmjF.21.0420\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2230\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\tLmjF21.0420\tmRNA\ttaxon:347515\t20141016\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0430\tLmjF.21.0430\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2240\tF\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0440\tLmjF.21.0440\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2250\tC\tubiquitin-conjugating enzyme-like protein\tLmjF21.0440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0440\tLmjF.21.0440\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2250\tC\tubiquitin-conjugating enzyme-like protein\tLmjF21.0440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0490\tJ3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2290\tC\tDnaJ protein, putative\tLmjF21.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0490\tJ3\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2290\tC\tDnaJ protein, putative\tLmjF21.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0520\tNUP41\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2320\tC\tNucleoporin NUP41\tLmjF21.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0520\tNUP41\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2320\tC\tNucleoporin NUP41\tLmjF21.0520\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0540\tLA\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2370\tC\tRNA-binding protein, putative\tLmjF21.0540\tmRNA\ttaxon:347515\t20160704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0540\tLA\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tRNA-binding protein, putative\tLmjF21.0540\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0550\tLmjF.21.0550\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2350\tC\tdihydrolipoamide acetyltransferase precursorlike protein\tLmjF21.0550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0550\tLmjF.21.0550\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2350\tC\tdihydrolipoamide acetyltransferase precursorlike protein\tLmjF21.0550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0600\tLmjF.21.0600\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1730\tC\thypothetical protein, conserved\tLmjF21.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0610\tLmjF.21.0610\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1720\tC\tRNA helicase, putative\tLmjF21.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0620\tLmjF.21.0620\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1710\tC\tDNA polymerase eta, putative\tLmjF21.0620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0630\tLmjF.21.0630\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1710\tC\tDNA polymerase eta, putative\tLmjF21.0630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0640\tLmjF.21.0640\t\tGO:0005975\tPMID:16037487\tISO\tGeneDB:TcCLB.508637.90\tP\tphosphoglucomutase, putative\tLmjF21.0640\tmRNA\ttaxon:347515\t20100602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0640\tLmjF.21.0640\t\tGO:0016868\tPMID:16037487\tISO\tGeneDB:TcCLB.508637.90\tF\tphosphoglucomutase, putative\tLmjF21.0640\tmRNA\ttaxon:347515\t20100602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0660\tLmjF.21.0660\t\tGO:0000166\tGO_REF:0000002\tISS\t\tF\tnucleotide-binding protein, putative\tLmjF21.0660\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0660\tLmjF.21.0660\t\tGO:0002143\tPMID:19875444\tISO\tGeneDB:TcCLB.508637.110\tP\tnucleotide-binding protein, putative\tLmjF21.0660\tmRNA\ttaxon:347515\t20100604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0660\tLmjF.21.0660\t\tGO:0005829\tPMID:19875444|GO_REF:0000024\tISO\tGeneDB:Tb927.10.1690|GeneDB:TcCLB.508637.110\tC\tnucleotide-binding protein, putative\tLmjF21.0660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0680\tLmjF.21.0680\t\tGO:0004407\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1680\tF\thistone deacetylase, putative\tLmjF21.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0680\tLmjF.21.0680\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1680\tC\thistone deacetylase, putative\tLmjF21.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0680\tLmjF.21.0680\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1680\tC\thistone deacetylase, putative\tLmjF21.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0680\tLmjF.21.0680\t\tGO:0031936\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1680\tP\thistone deacetylase, putative\tLmjF21.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0700\tLmjF.21.0700\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1620\tC\tdual specificity protein phosphatase, putative\tLmjF21.0700\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0710\tABCE1\t\tGO:0000291\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1630\tP\tATP-binding cassette protein subfamily E, member 1, putative\tLmjF21.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0710\tABCE1\t\tGO:0004540\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1630\tF\tATP-binding cassette protein subfamily E, member 1, putative\tLmjF21.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0710\tABCE1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1630\tC\tATP-binding cassette protein subfamily E, member 1, putative\tLmjF21.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0710\tABCE1\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tATP-binding cassette protein subfamily E, member 1, putative\tLmjF21.0710\tmRNA\ttaxon:347515\t20090608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0710\tABCE1\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1630\tC\tATP-binding cassette protein subfamily E, member 1, putative\tLmjF21.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0720\tLmjF.21.0720\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1660\tC\thypothetical protein, conserved\tLmjF21.0720\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0720\tLmjF.21.0720\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1660\tC\thypothetical protein, conserved\tLmjF21.0720\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0720\tLmjF.21.0720\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1660\tC\thypothetical protein, conserved\tLmjF21.0720\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0720\tLmjF.21.0720\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1660\tC\thypothetical protein, conserved\tLmjF21.0720\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0720\tLmjF.21.0720\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1660\tC\thypothetical protein, conserved\tLmjF21.0720\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0720\tLmjF.21.0720\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1660\tC\thypothetical protein, conserved\tLmjF21.0720\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0725\tATEL1\t\tGO:0005829\tPMID:30208112\tIDA\t\tC\tleucyl/phenylalanyl-tRNA protein transferase, putative\tLmjF21.0725\tmRNA\ttaxon:347515\t20190702\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0725\tATEL1\t\tGO:0005829\tPMID:30208112\tIDA\t\tC\tleucyl/phenylalanyl-tRNA protein transferase, putative\tLmjF21.0725\tmRNA\ttaxon:347515\t20190702\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0730\tLmjF.21.0730\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1590\tC\t60S ribosomal protein L36, putative\tLmjF21.0730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0735\tMIC10-1\t\tGO:0061617\tPMID:30415698\tISO\tGeneDB:Tb927.10.1580\tC\tMICOS complex subunit MIC10-1, putative\tLmjF21.0735\tmRNA\ttaxon:347515\t20181211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0740\tLmjF.21.0740\t\tGO:0000276\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1570\tC\tATPase subunit 9, putative\tLmjF21.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0740\tLmjF.21.0740\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1570\tC\tATPase subunit 9, putative\tLmjF21.0740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0750\tNOP91\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1560\tC\tNucleolar protein 91, putative\tLmjF21.0750\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0750\tNOP91\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1560\tC\tNucleolar protein 91, putative\tLmjF21.0750\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0760\tRPN5\t\tGO:0004175\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1550\tF\tproteasome regulatory non-ATP-ase subunit 5, putative\tLmjF21.0760\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0760\tRPN5\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1550\tC\tproteasome regulatory non-ATP-ase subunit 5, putative\tLmjF21.0760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0760\tRPN5\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1550\tC\tproteasome regulatory non-ATP-ase subunit 5, putative\tLmjF21.0760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0760\tRPN5\t\tGO:0005838\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1550\tC\tproteasome regulatory non-ATP-ase subunit 5, putative\tLmjF21.0760\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0760\tRPN5\t\tGO:0006511\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1550\tP\tproteasome regulatory non-ATP-ase subunit 5, putative\tLmjF21.0760\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0770\tLmjF.21.0770\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF21.0770\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0770\tLmjF.21.0770\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1540\tF\thypothetical protein, conserved\tLmjF21.0770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0770\tLmjF.21.0770\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1540\tC\thypothetical protein, conserved\tLmjF21.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0770\tLmjF.21.0770\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1540\tP\thypothetical protein, conserved\tLmjF21.0770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0790\tRAB21\t\tGO:0003924\tGO_REF:0000011\tISM\tInterPro:IPR001806\tF\tras-related protein Rab21, putative\tLmjF21.0790\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0790\tRAB21\t\tGO:0007264\tGO_REF:0000011\tISM\tInterPro:IPR001806\tP\tras-related protein Rab21, putative\tLmjF21.0790\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0800\tNOT1\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1510\tC\tGeneral negative regulator of transcription subunit 1\tLmjF21.0800|CNOT1\tmRNA\ttaxon:347515\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0810\tMetRS\t\tGO:0000287\tPMID:21144880\tIDA\t\tF\tmethionyl-tRNA synthetase\tLmjF21.0810\tmRNA\ttaxon:347515\t20101216\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0810\tMetRS\t\tGO:0004825\tPMID:21144880\tISS\t\tF\tmethionyl-tRNA synthetase\tLmjF21.0810\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0810\tMetRS\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1500\tC\tmethionyl-tRNA synthetase\tLmjF21.0810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0810\tMetRS\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1500\tC\tmethionyl-tRNA synthetase\tLmjF21.0810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0820\tLmjF.21.0820\t\tGO:0035061\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1490\tC\tTemperature dependent protein affecting M2 dsRNA replication, putative\tLmjF21.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0820\tLmjF.21.0820\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1490\tP\tTemperature dependent protein affecting M2 dsRNA replication, putative\tLmjF21.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0825\tLmjF.21.0825\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1450\tC\tconserved hypothetical protein\tLmjF21.0825\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0827\tLmjF.21.0827\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1440\tC\thypothetical protein, conserved\tLmjF21.0827\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0840\tMetAP2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1420\tC\tmetallo-peptidase, Clan MG, Family M24\tLmjF21.0840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0840\tMetAP2\t\tGO:0006508\tGO_REF:0000011\tISM\tInterPro:IPR000994\tP\tmetallo-peptidase, Clan MG, Family M24\tLmjF21.0840\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0840\tMetAP2\t\tGO:0008237\tGO_REF:0000011\tISM\tInterPro:IPR000994\tF\tmetallo-peptidase, Clan MG, Family M24\tLmjF21.0840\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0843\tLmjF.21.0843\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1410\tC\thypothetical protein, conserved\tLmjF21.0843\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0845\tHGPRT\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1400\tC\thypoxanthine-guanine phosphoribosyltransferase\tLmjF21.0845\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0845\tHGPRT\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1390\tC\thypoxanthine-guanine phosphoribosyltransferase\tLmjF21.0845\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0845\tHGPRT\t\tGO:0020015\tPMID:9430693|PMID:19497128\tEXP\t\tC\thypoxanthine-guanine phosphoribosyltransferase\tLmjF21.0845\tmRNA\ttaxon:347515\t20090803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0845\tHGPRT\t\tGO:0020022\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1390\tC\thypoxanthine-guanine phosphoribosyltransferase\tLmjF21.0845\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0845\tHGPRT\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1400\tC\thypoxanthine-guanine phosphoribosyltransferase\tLmjF21.0845\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0845\tHGPRT\t\tGO:0043101\tPMID:8577321|PMID:19497128\tEXP\t\tP\thypoxanthine-guanine phosphoribosyltransferase\tLmjF21.0845\tmRNA\ttaxon:347515\t20090803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0845\tHGPRT\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1470\tC\thypoxanthine-guanine phosphoribosyltransferase\tLmjF21.0845\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0000310\tPMID:10567419|PMID:19497128\tIDA\t\tF\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20090803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0000310\tGO_REF:0000024\tISO\tGeneDB:LdBPK_210990.1\tF\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20180206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0004422\tGO_REF:0000024\tISO\tGeneDB:LdBPK_210990.1\tF\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20180206\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0004422\tPMID:10567419|PMID:19497128\tIDA\t\tF\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20090803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1400\tC\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1390\tC\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0020015\tPMID:14747142|PMID:19497128\tEXP\t\tC\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20090803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0020022\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1390\tC\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1400\tC\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0043101\tPMID:10567419|PMID:19497128\tEXP\t\tP\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20090803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1470\tC\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0865\tLmjF.21.0865\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1340\tC\thypothetical protein, conserved\tLmjF21.0865\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0873\tLmjF.21.0873\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1320\tC\thypothetical protein, conserved\tLmjF21.0873\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0883\tLmjF.21.0883\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1280\tC\tDomain of unknown function (DUF4499), putative\tLmjF21.0883\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0883\tLmjF.21.0883\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1280\tC\tDomain of unknown function (DUF4499), putative\tLmjF21.0883\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0885\tLmjF.21.0885\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1270\tC\tmis-match repair protein, putative\tLmjF21.0885\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0895\tLmjF.21.0895\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1260\tC\taspartyl-tRNA synthetase, putative\tLmjF21.0895\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0910\tLmjF.21.0910\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1250\tC\tAminoacyl-tRNA editing domain containing protein, putative\tLmjF21.0910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0910\tLmjF.21.0910\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1250\tP\tAminoacyl-tRNA editing domain containing protein, putative\tLmjF21.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0940\tLmjF.21.0940\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1230\tC\thypothetical protein, conserved\tLmjF21.0940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0940\tLmjF.21.0940\t\tGO:0009986\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1230\tC\thypothetical protein, conserved\tLmjF21.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0940\tLmjF.21.0940\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1230\tC\thypothetical protein, conserved\tLmjF21.0940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0950\tLmjF.21.0950\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1200\tC\tProgrammed cell death protein 2, C-terminal putative domain containing protein, putative\tLmjF21.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0970\tLmjF.21.0970\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1180\tC\thypothetical protein, conserved\tLmjF21.0970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0980\tIFT172\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1170\tC\tintraflagellar transport protein 172, putative\tLmjF21.0980\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0980\tIFT172\t\tGO:0031514\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1170\tC\tintraflagellar transport protein 172, putative\tLmjF21.0980\tmRNA\ttaxon:347515\t20150303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0980\tIFT172\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1170\tP\tintraflagellar transport protein 172, putative\tLmjF21.0980\tmRNA\ttaxon:347515\t20150305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0980\tIFT172\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1170\tC\tintraflagellar transport protein 172, putative\tLmjF21.0980\tmRNA\ttaxon:347515\t20150303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0990\tLmjF.21.0990\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1160\tC\thypothetical protein, conserved\tLmjF21.0990\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0990\tLmjF.21.0990\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1160\tC\thypothetical protein, conserved\tLmjF21.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1010\tLmjF.21.1010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1140\tC\tepsilon tubulin, putative\tLmjF21.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1030\tLmjF.21.1030\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1120\tC\thypothetical protein, conserved\tLmjF21.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1030\tLmjF.21.1030\t\tGO:0097542\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1120\tC\thypothetical protein, conserved\tLmjF21.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1040\tLmjF.21.1040\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1110\tC\tkinesin, putative\tLmjF21.1040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1050\tLmjF.21.1050\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1100\tC\t60S ribosomal protein L9, putative\tLmjF21.1050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1050\tLmjF.21.1050\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1100\tC\t60S ribosomal protein L9, putative\tLmjF21.1050\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1060\tLmjF.21.1060\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1080\tC\t40S ribosomal protein S23, putative\tLmjF21.1060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1070\tLmjF.21.1070\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1080\tC\t40S ribosomal protein S23, putative\tLmjF21.1070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1080\tCRK1\t\tGO:0000262\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tC\tcdc2-related kinase 1\tLmjF21.1080\tmRNA\ttaxon:347515\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1080\tCRK1\t\tGO:0005634\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tC\tcdc2-related kinase 1\tLmjF21.1080\tmRNA\ttaxon:347515\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1080\tCRK1\t\tGO:0005737\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tC\tcdc2-related kinase 1\tLmjF21.1080\tmRNA\ttaxon:347515\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1080\tCRK1\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1070\tC\tcdc2-related kinase 1\tLmjF21.1080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1080\tCRK1\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1070\tC\tcdc2-related kinase 1\tLmjF21.1080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1080\tCRK1\t\tGO:0006468\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tP\tcdc2-related kinase 1\tLmjF21.1080\tmRNA\ttaxon:347515\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1080\tCRK1\t\tGO:0007049\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tP\tcdc2-related kinase 1\tLmjF21.1080\tmRNA\ttaxon:347515\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1080\tCRK1\t\tGO:0097472\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tF\tcdc2-related kinase 1\tLmjF21.1080\tmRNA\ttaxon:347515\t20170303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1090\tLmjF.21.1090\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.1060\tC\tT-complex protein 1, delta subunit, putative\tLmjF21.1090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1100\tLmjF.21.1100\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.980\tC\tRNA polymerase III transcription factor (TF)IIIC subunit, putative\tLmjF21.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1100\tLmjF.21.1100\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.980\tC\tRNA polymerase III transcription factor (TF)IIIC subunit, putative\tLmjF21.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1120\tLmjF.21.1120\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.960\tC\tU4/U6 small nuclear ribonuclear protein, putative\tLmjF21.1120\tmRNA\ttaxon:347515\t20090514\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1120\tLmjF.21.1120\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.960\tC\tU4/U6 small nuclear ribonuclear protein, putative\tLmjF21.1120\tmRNA\ttaxon:347515\t20100927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1120\tLmjF.21.1120\t\tGO:0008380\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.960\tP\tU4/U6 small nuclear ribonuclear protein, putative\tLmjF21.1120\tmRNA\ttaxon:347515\t20090514\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1120\tLmjF.21.1120\t\tGO:0030627\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.960\tF\tU4/U6 small nuclear ribonuclear protein, putative\tLmjF21.1120\tmRNA\ttaxon:347515\t20100927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1180\tLmjF.21.1180\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.920\tC\tRibosomal protein L1p/L10e family, putative\tLmjF21.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1180\tLmjF.21.1180\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.920\tC\tRibosomal protein L1p/L10e family, putative\tLmjF21.1180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1190\tPIF6\t\tGO:0000287\tPMID:19646907\tISO\tGeneDB:Tb927.10.910\tF\tDNA repair and recombination helicase protein PIF6, putative\tLmjF21.1190\tmRNA\ttaxon:347515\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1190\tPIF6\t\tGO:0000723\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF6, putative\tLmjF21.1190\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1190\tPIF6\t\tGO:0004003\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.10.910\tF\tDNA repair and recombination helicase protein PIF6, putative\tLmjF21.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1190\tPIF6\t\tGO:0005524\tPMID:19646907\tISO\tGeneDB:Tb927.10.910\tF\tDNA repair and recombination helicase protein PIF6, putative\tLmjF21.1190\tmRNA\ttaxon:347515\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1190\tPIF6\t\tGO:0005634\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.10.910\tC\tDNA repair and recombination helicase protein PIF6, putative\tLmjF21.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1190\tPIF6\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.910\tC\tDNA repair and recombination helicase protein PIF6, putative\tLmjF21.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1190\tPIF6\t\tGO:0006281\tPMID:32609721\tIMP\t\tP\tDNA repair and recombination helicase protein PIF6, putative\tLmjF21.1190\tmRNA\ttaxon:347515\t20210215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1190\tPIF6\t\tGO:0006310\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF6, putative\tLmjF21.1190\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1190\tPIF6\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.910\tC\tDNA repair and recombination helicase protein PIF6, putative\tLmjF21.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1190\tPIF6\t\tGO:0051276\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF6, putative\tLmjF21.1190\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1200\tLmjF.21.1200\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.900\tC\thypothetical protein, conserved\tLmjF21.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1200\tLmjF.21.1200\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.900\tC\thypothetical protein, conserved\tLmjF21.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1200\tLmjF.21.1200\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.900\tC\thypothetical protein, conserved\tLmjF21.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1210\tLmjF.21.1210\t\tGO:0004797\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.880\tF\tthymidine kinase, putative\tLmjF21.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1210\tLmjF.21.1210\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.880\tC\tthymidine kinase, putative\tLmjF21.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1210\tLmjF.21.1210\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.880\tC\tthymidine kinase, putative\tLmjF21.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1210\tLmjF.21.1210\t\tGO:0006220\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.880\tP\tthymidine kinase, putative\tLmjF21.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1280\tLmjF.21.1280\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.800\tC\thypothetical protein, conserved\tLmjF21.1280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1280\tLmjF.21.1280\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.800\tC\thypothetical protein, conserved\tLmjF21.1280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1290\tLmjF.21.1290\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.790\tC\tvesicle-associated membrane protein, 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1350\tLmjF.21.1350\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.720\tP\tPB1 domain containing protein, putative\tLmjF21.1350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1350\tLmjF.21.1350\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.720\tC\tPB1 domain containing protein, putative\tLmjF21.1350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1350\tLmjF.21.1350\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.720\tC\tPB1 domain containing 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1390\tLmjF.21.1390\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb927.10.690\tP\tpalmitoyl acyltransferase 3, putative\tLmjF21.1390\tmRNA\ttaxon:347515\t20110620\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1390\tLmjF.21.1390\t\tGO:0006897\tPMID:19240115\tISO\tGeneDB:Tb927.10.690\tP\tpalmitoyl acyltransferase 3, putative\tLmjF21.1390\tmRNA\ttaxon:347515\t20110620\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1390\tLmjF.21.1390\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1400\tLmjF.21.1400\t\tGO:0006897\tPMID:19240115\tISO\tGeneDB:Tb927.10.690\tP\tpalmitoyl acyltransferase 3, putative\tLmjF21.1400\tmRNA\ttaxon:347515\t20110620\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1400\tLmjF.21.1400\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 3, putative\tLmjF21.1400\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1400\tLmjF.21.1400\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb927.10.690\tP\tpalmitoyl acyltransferase 3, putative\tLmjF21.1400\tmRNA\ttaxon:347515\t20110620\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1430\tLmjF.21.1430\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.660\tC\t2-oxoisovalerate dehydrogenase alpha subunit, putative\tLmjF21.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1440\tLmjF.21.1440\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.650\tC\tcytochrome b5-like Heme/Steroid binding domain containing protein, putative\tLmjF21.1440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1450\tPRMT5\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.640\tC\targinine N-methyltransferase, type II, putative\tLmjF21.1450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1450\tPRMT5\t\tGO:0008469\tPMID:17601874|GO_REF:0000024\tISO\tGeneDB:Tb927.10.640\tF\targinine N-methyltransferase, type II, putative\tLmjF21.1450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1450\tPRMT5\t\tGO:0016273\tPMID:17601874|GO_REF:0000024\tISO\tGeneDB:Tb927.10.640\tF\targinine N-methyltransferase, type II, putative\tLmjF21.1450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1450\tPRMT5\t\tGO:0019918\tPMID:17601874|GO_REF:0000024\tISO\tGeneDB:Tb927.10.640\tP\targinine N-methyltransferase, type II, putative\tLmjF21.1450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1500\tLmjF.21.1500\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.600\tC\thypothetical protein, conserved\tLmjF21.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1510\tLmjF.21.1510\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.590\tC\thypothetical protein, conserved\tLmjF21.1510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1540\tLmjF.21.1540\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.570\tC\tSec8 exocyst complex component specific domain containing protein, putative\tLmjF21.1540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1550\tLmjF.21.1550\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.560\tF\t40S ribosomal protein S11, putative\tLmjF21.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1552\tSUB2\t\tGO:0000993\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508319.40\tF\tATP-dependent RNA helicase SUB2, putative\tLmjF21.1552\tmRNA\ttaxon:347515\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1552\tSUB2\tNOT\tGO:0001042\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508319.40\tF\tATP-dependent RNA helicase SUB2, putative\tLmjF21.1552\tmRNA\ttaxon:347515\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1552\tSUB2\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.540\tF\tATP-dependent RNA helicase SUB2, putative\tLmjF21.1552\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1552\tSUB2\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508319.40\tC\tATP-dependent RNA helicase SUB2, putative\tLmjF21.1552\tmRNA\ttaxon:347515\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1552\tSUB2\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.540\tC\tATP-dependent RNA helicase SUB2, putative\tLmjF21.1552\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1552\tSUB2\t\tGO:0016071\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508319.40\tP\tATP-dependent RNA helicase SUB2, putative\tLmjF21.1552\tmRNA\ttaxon:347515\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1555\tLmjF.21.1555\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.520\tC\thypothetical protein, conserved\tLmjF21.1555\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1555\tLmjF.21.1555\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.520\tC\thypothetical protein, conserved\tLmjF21.1555\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1558\tPOMP19\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.510\tC\tPresent in the outer mitochondrial membrane proteome 19\tLmjF21.1558\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1558\tPOMP19\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.510\tC\tPresent in the outer mitochondrial membrane proteome 19\tLmjF21.1558\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1558\tPOMP19\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.510\tC\tPresent in the outer mitochondrial membrane proteome 19\tLmjF21.1558\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1558\tPOMP19\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.510\tC\tPresent in the outer mitochondrial membrane proteome 19\tLmjF21.1558\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1560\tLmjF.21.1560\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.550\tP\thypothetical protein, conserved\tLmjF21.1560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1560\tLmjF.21.1560\t\tGO:1990900\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.550\tC\thypothetical protein, conserved\tLmjF21.1560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1561\tLmjF.21.1561\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.480\tC\thypothetical protein, conserved\tLmjF21.1561\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1563\tLmjF.21.1563\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.470\tC\tcholine dehydrogenase, like protein\tLmjF21.1563\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1565\tNRKC\t\tGO:0004672\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.460\tF\tNIMA-related kinase, putative\tLmjF21.1565\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1565\tNRKC\t\tGO:0005524\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.460\tF\tNIMA-related kinase, putative\tLmjF21.1565\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1565\tNRKC\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.460\tC\tNIMA-related kinase, putative\tLmjF21.1565\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1565\tNRKC\t\tGO:0032465\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.460\tP\tNIMA-related kinase, putative\tLmjF21.1565\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1565\tNRKC\t\tGO:0036064\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.460\tC\tNIMA-related kinase, putative\tLmjF21.1565\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1566\tLmjF.21.1566\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.450\tP\tMicrotubule-binding protein MIP-T3, putative\tLmjF21.1566\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1566\tLmjF.21.1566\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.450\tP\tMicrotubule-binding protein MIP-T3, putative\tLmjF21.1566\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1567\tLmjF.21.1567\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.430\tC\tperoxidase, putative\tLmjF21.1567\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1568\tLmjF.21.1568\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.440\tC\thypothetical protein, conserved\tLmjF21.1568\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1569\tEXO99\t\tGO:0000145\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.420\tC\tExocyst complex component EXO99\tLmjF21.1569\tmRNA\ttaxon:347515\t20170320\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1569\tEXO99\t\tGO:0006897\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.420\tP\tExocyst complex component EXO99\tLmjF21.1569\tmRNA\ttaxon:347515\t20170320\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1569\tEXO99\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.420\tC\tExocyst complex component EXO99\tLmjF21.1569\tmRNA\ttaxon:347515\t20170320\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1590\tLmjF.21.1590\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.410\tC\tF-box-like, putative\tLmjF21.1590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1605\tLmjF.21.1605\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.400\tC\thypothetical protein, conserved\tLmjF21.1605\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1605\tLmjF.21.1605\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.400\tC\thypothetical protein, conserved\tLmjF21.1605\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1605\tLmjF.21.1605\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.400\tC\thypothetical protein, conserved\tLmjF21.1605\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1610\tLmjF.21.1610\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.390\tC\thypothetical protein, conserved\tLmjF21.1610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1620\tLmjF.21.1620\t\tGO:0003723\tPMID:18951088|GO_REF:0000024\tISO\tGeneDB:Tb927.10.380\tF\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF21.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1620\tLmjF.21.1620\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.380\tC\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF21.1620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1620\tLmjF.21.1620\t\tGO:0005739\tPMID:15223320|GO_REF:0000024\tISO\tGeneDB:Tb927.10.380\tC\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF21.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1620\tLmjF.21.1620\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.380\tC\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF21.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1620\tLmjF.21.1620\t\tGO:0043631\tPMID:18951088|GO_REF:0000024\tISO\tGeneDB:Tb927.10.380\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF21.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1630\tCNB\t\tGO:0005829\tPMID:21320183\tIDA\t\tC\tcalcineurin b subunit\tLmjF21.1630\tmRNA\ttaxon:347515\t20110615\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1630\tCNB\t\tGO:0009408\tPMID:21320183\tIMP\t\tP\tcalcineurin b subunit\tLmjF21.1630\tmRNA\ttaxon:347515\t20150311\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1630\tCNB\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.370\tP\tcalcineurin b subunit\tLmjF21.1630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1640\tLmjF.21.1640\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.360\tC\thypothetical protein, conserved\tLmjF21.1640\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1640\tLmjF.21.1640\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.360\tC\thypothetical protein, conserved\tLmjF21.1640\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1650\tPK4\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.350\tC\tprotein kinase PK4, putative\tLmjF21.1650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1650\tPK4\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.350\tC\tprotein kinase PK4, putative\tLmjF21.1650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1660\tLmjF.21.1660\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.340\tC\tmitochondrial structure specific endonuclease I (SSE-1), putative\tLmjF21.1660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1680\tPUF3\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.310\tF\tpumillio protein 3, putative\tLmjF21.1680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1680\tPUF3\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.310\tP\tpumillio protein 3, putative\tLmjF21.1680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1690\tLmjF.21.1690\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.300\tC\tProtein of unknown function, DUF607, putative\tLmjF21.1690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1700\tLmjF.21.1700\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.290\tC\tproteasome alpha 2 subunit, putative\tLmjF21.1700\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1710\tCOX6\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.280\tC\tcytochrome c oxidase subunit VI, putative\tLmjF21.1710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1710\tCOX6\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.280\tC\tcytochrome c oxidase subunit VI, putative\tLmjF21.1710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1720\tRPL32\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.270\tC\t60S ribosomal protein L32\tLmjF21.1720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1720\tRPL32\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.270\tC\t60S ribosomal protein L32\tLmjF21.1720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1740\tKPAP2\t\tGO:0004652\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.160\tF\tRNA polymerase II, putative\tLmjF21.1740\tmRNA\ttaxon:347515\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1740\tKPAP2\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.160\tC\tRNA polymerase II, putative\tLmjF21.1740\tmRNA\ttaxon:347515\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1740\tKPAP2\t\tGO:0006378\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.160\tP\tRNA polymerase II, putative\tLmjF21.1740\tmRNA\ttaxon:347515\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1760\tLmjF.21.1760\t\tGO:0000154\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.170\tP\tcentromere/microtubule binding protein cbf5, putative\tLmjF21.1760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1760\tLmjF.21.1760\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.170\tC\tcentromere/microtubule binding protein cbf5, putative\tLmjF21.1760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1770\tATPF1G\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.180\tC\tATP synthase F1 subunit gamma protein, putative\tLmjF21.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1770\tATPF1G\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.180\tC\tATP synthase F1 subunit gamma protein, putative\tLmjF21.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1780\tRPS6\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.190\tF\t40S ribosomal protein S6, putative\tLmjF21.1780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1790\tLmjF.21.1790\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.200\tP\tvacuolar ATP synthase, putative\tLmjF21.1790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1800\tLmjF.21.1800\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.200\tP\tvacuolar ATP synthase, putative\tLmjF21.1800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1810\tGAA1\t\tGO:0003923\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.210\tF\tGPI transamidase component GAA1, putative\tLmjF21.1810\tmRNA\ttaxon:347515\t20091125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1810\tGAA1\t\tGO:0006506\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.210\tP\tGPI transamidase component GAA1, putative\tLmjF21.1810\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1810\tGAA1\t\tGO:0042765\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.210\tC\tGPI transamidase component GAA1, putative\tLmjF21.1810\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1830\tLmjF.21.1830\t\tGO:0005634\tGO_REF:0000012\tISA\tUniProtKB:Q9XZG5\tC\tproteasome subunit alpha type-5, putative\tLmjF21.1830\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1830\tLmjF.21.1830\t\tGO:0005829\tGO_REF:0000012\tISA\tUniProtKB:Q9XZG5\tC\tproteasome subunit alpha type-5, putative\tLmjF21.1830\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1830\tLmjF.21.1830\t\tGO:0005839\tPMID:11309374\tISS\t\tC\tproteasome subunit alpha type-5, putative\tLmjF21.1830\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1830\tLmjF.21.1830\t\tGO:0006511\tGO_REF:0000011\tISM\tInterPro:IPR001353\tP\tproteasome subunit alpha type-5, putative\tLmjF21.1830\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1840\tPEX14\t\tGO:0005515\tPMID:18178267\tIPI\tGeneDB:LmjF.29.0740\tF\tperoxin 14, putative\tLmjF21.1840\tmRNA\ttaxon:347515\t20141209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1840\tPEX14\t\tGO:0006623\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.240\tP\tperoxin 14, putative\tLmjF21.1840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1840\tPEX14\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.240\tP\tperoxin 14, putative\tLmjF21.1840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1840\tPEX14\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.240\tC\tperoxin 14, putative\tLmjF21.1840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1840\tPEX14\t\tGO:0046860\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.240\tC\tperoxin 14, putative\tLmjF21.1840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1850\tLmjF.21.1850\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.250\tC\thypothetical protein, conserved\tLmjF21.1850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0080\tLmjF.22.0080\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2070\tC\theat shock protein DNAJ, putative\tLmjF22.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0080\tLmjF.22.0080\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2070\tC\theat shock protein DNAJ, putative\tLmjF22.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0080\tLmjF.22.0080\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2070\tC\theat shock protein DNAJ, putative\tLmjF22.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0080\tLmjF.22.0080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2070\tC\theat shock protein DNAJ, putative\tLmjF22.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0090\tCGM1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2080\tC\tRNA capping enzyme, nuclear\tLmjF22.0090\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0090\tCGM1\t\tGO:0036260\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2080\tP\tRNA capping enzyme, nuclear\tLmjF22.0090\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0090\tCGM1\tNOT\tGO:0043144\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2080\tP\tRNA capping enzyme, nuclear\tLmjF22.0090\tmRNA\ttaxon:347515\t20160720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0090\tCGM1\tNOT\tGO:1990273\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2080\tP\tRNA capping enzyme, nuclear\tLmjF22.0090\tmRNA\ttaxon:347515\t20160720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0110\tGMPS\t\tGO:0003922\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2100\tF\tGMP synthase [glutamine-hydrolysing]\tLmjF22.0110\tmRNA\ttaxon:347515\t20150720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0110\tGMPS\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2100\tC\tGMP synthase [glutamine-hydrolysing]\tLmjF22.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0110\tGMPS\t\tGO:0032263\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2100\tP\tGMP synthase [glutamine-hydrolysing]\tLmjF22.0110\tmRNA\ttaxon:347515\t20150720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0120\tLmjF.22.0120\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2110\tC\thypothetical protein, conserved\tLmjF22.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0120\tLmjF.22.0120\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2110\tC\thypothetical protein, conserved\tLmjF22.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0120\tLmjF.22.0120\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2110\tP\thypothetical protein, conserved\tLmjF22.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0150\tLmjF.22.0150\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2130\tC\tUncharacterized conserved protein (DUF2036), putative\tLmjF22.0150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0160\tLmjF.22.0160\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF22.0160\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0160\tLmjF.22.0160\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2140\tC\thypothetical protein, conserved\tLmjF22.0160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0160\tLmjF.22.0160\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2140\tP\thypothetical protein, conserved\tLmjF22.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0160\tLmjF.22.0160\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2140\tC\thypothetical protein, conserved\tLmjF22.0160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0160\tLmjF.22.0160\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2140\tC\thypothetical protein, conserved\tLmjF22.0160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0170\tLmjF.22.0170\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2150\tC\thypothetical protein, conserved\tLmjF22.0170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0170\tLmjF.22.0170\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2150\tC\thypothetical protein, conserved\tLmjF22.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0210\tNOP168\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2170\tF\tNucleolar protein 168, putative\tLmjF22.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0210\tNOP168\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2170\tC\tNucleolar protein 168, putative\tLmjF22.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0210\tNOP168\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2170\tC\tNucleolar protein 168, putative\tLmjF22.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0250\tLmjF.22.0250\t\tGO:0042577\tPMID:20678187\tIDA\t\tF\tphosphoinositide phosphatase\tLmjF22.0250\tmRNA\ttaxon:347515\t20101007\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0260\tLmjF.22.0260\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2190\tC\ttranslocon-associated protein (TRAP), alpha subunit, putative\tLmjF22.0260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0260\tLmjF.22.0260\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2190\tC\ttranslocon-associated protein (TRAP), alpha subunit, putative\tLmjF22.0260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0270\tLmjF.22.0270\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2200\tC\tTim10/DDP family zinc finger, putative\tLmjF22.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0290\tLmjF.22.0290\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2230\tC\tmitochondrial carrier protein, putative\tLmjF22.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0300\tLmjF.22.0300\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2240\tF\thypothetical protein, conserved\tLmjF22.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0300\tLmjF.22.0300\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2240\tC\thypothetical protein, conserved\tLmjF22.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0380\tNUP132\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2300\tC\tNucleoporin 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59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0390\tLmjF.22.0390\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2310\tC\tDNA primase small subunit, putative\tLmjF22.0390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0390\tLmjF.22.0390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2310\tC\tDNA primase small subunit, putative\tLmjF22.0390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0390\tLmjF.22.0390\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2310\tC\tDNA primase small subunit, 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0450\tLmjF.22.0450\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2360\tC\tAcetyltransferase (GNAT) family, putative\tLmjF22.0450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0450\tLmjF.22.0450\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2360\tC\tAcetyltransferase (GNAT) family, putative\tLmjF22.0450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0770\tLmjF.22.0770\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2710\tC\tNADH-cytochrome b5 reductase, putative\tLmjF22.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0770\tLmjF.22.0770\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2710\tC\tNADH-cytochrome b5 reductase, putative\tLmjF22.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0780\tLmjF.22.0780\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2710\tC\tNADH-cytochrome b5 reductase, putative\tLmjF22.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0780\tLmjF.22.0780\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2710\tC\tNADH-cytochrome b5 reductase, putative\tLmjF22.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0790\tLmjF.22.0790\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2720\tC\ttranslation initiation factor SUI1, putative\tLmjF22.0790\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0800\tLmjF.22.0800\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2740\tC\thypothetical protein, conserved\tLmjF22.0800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0800\tLmjF.22.0800\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2740\tC\thypothetical protein, conserved\tLmjF22.0800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0820\tLmjF.22.0820\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2630\tC\t50S ribosome-binding GTPase, putative\tLmjF22.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0830\tLmjF.22.0830\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2620\tC\thypothetical protein, conserved\tLmjF22.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0870\tLmjF.22.0870\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2760\tC\tribosomal protein L22p/L17e, putative\tLmjF22.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0870\tLmjF.22.0870\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2760\tP\tribosomal protein L22p/L17e, putative\tLmjF22.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0880\tLmjF.22.0880\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2770\tC\thypothetical protein, conserved\tLmjF22.0880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0890\tLmjF.22.0890\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2780\tP\thypothetical protein, conserved\tLmjF22.0890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0900\tLmjF.22.0900\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2790\tP\thypothetical protein, conserved\tLmjF22.0900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0960\tLmjF.22.0960\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3000\tC\tkinesin, putative\tLmjF22.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0960\tLmjF.22.0960\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3000\tC\tkinesin, putative\tLmjF22.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0970\tLmjF.22.0970\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3010\tC\thypothetical protein, conserved\tLmjF22.0970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0980\tLmjF.22.0980\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3040\tC\tF-box and WD40 domain containing protein\tLmjF22.0980\tmRNA\ttaxon:347515\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.0990\tLmjF.22.0990\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3050\tC\thypothetical protein, conserved\tLmjF22.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1000\tLmjF.22.1000\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3060\tC\thypothetical protein, conserved\tLmjF22.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1010\tHUT1L\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3070\tC\tUDP-galactose transporter, putative\tLmjF22.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1010\tHUT1L\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3070\tC\tUDP-galactose transporter, putative\tLmjF22.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1010\tHUT1L\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3070\tC\tUDP-galactose transporter, putative\tLmjF22.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1030\tLmjF.22.1030\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3090\tC\thypothetical protein, conserved\tLmjF22.1030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1030\tLmjF.22.1030\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3090\tC\thypothetical protein, conserved\tLmjF22.1030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1050\tLmjF.22.1050\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3110\tC\tmajor facilitator superfamily, putative\tLmjF22.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1060\tLmjF.22.1060\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3120\tC\tsmall nuclear ribonucleoprotein, putative\tLmjF22.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1060\tLmjF.22.1060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3120\tC\tsmall nuclear ribonucleoprotein, putative\tLmjF22.1060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1080\tLmjF.22.1080\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3140\tC\thypothetical protein, conserved\tLmjF22.1080\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1090\tLmjF.22.1090\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3150\tC\tCRAL/TRIO domain containing protein, putative\tLmjF22.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1110\tLmjF.22.1110\t\tGO:0003777\tPMID:17897317\tISO\tGeneDB:Tb927.7.3160\tF\tCytoplasmic dynein 1 heavy chain (DYNC1H1), putative\tLmjF22.1110\tmRNA\ttaxon:347515\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1110\tLmjF.22.1110\t\tGO:0005524\tPMID:17897317\tISO\tGeneDB:Tb927.7.3160\tF\tCytoplasmic dynein 1 heavy chain (DYNC1H1), putative\tLmjF22.1110\tmRNA\ttaxon:347515\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1110\tLmjF.22.1110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3160\tC\tCytoplasmic dynein 1 heavy chain (DYNC1H1), putative\tLmjF22.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1110\tLmjF.22.1110\t\tGO:0007018\tPMID:17897317\tISO\tGeneDB:Tb927.7.3160\tP\tCytoplasmic dynein 1 heavy chain (DYNC1H1), putative\tLmjF22.1110\tmRNA\ttaxon:347515\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1110\tLmjF.22.1110\t\tGO:0007052\tPMID:17897317\tISO\tGeneDB:Tb927.7.3160\tP\tCytoplasmic dynein 1 heavy chain (DYNC1H1), putative\tLmjF22.1110\tmRNA\ttaxon:347515\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1110\tLmjF.22.1110\t\tGO:0007059\tPMID:17897317\tTAS\t\tP\tCytoplasmic dynein 1 heavy chain (DYNC1H1), putative\tLmjF22.1110\tmRNA\ttaxon:347515\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1110\tLmjF.22.1110\t\tGO:0016887\tPMID:17897317\tISO\tGeneDB:Tb927.7.3160\tF\tCytoplasmic dynein 1 heavy chain (DYNC1H1), putative\tLmjF22.1110\tmRNA\ttaxon:347515\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1110\tLmjF.22.1110\t\tGO:0030286\tPMID:17897317\tISO\tGeneDB:Tb927.7.3160\tC\tCytoplasmic dynein 1 heavy chain (DYNC1H1), putative\tLmjF22.1110\tmRNA\ttaxon:347515\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1110\tLmjF.22.1110\t\tGO:0072382\tPMID:17897317\tISO\tGeneDB:Tb927.7.3160\tP\tCytoplasmic dynein 1 heavy chain (DYNC1H1), putative\tLmjF22.1110\tmRNA\ttaxon:347515\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1140\tLmjF.22.1140\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3180\tC\tadaptor complex AP-1 medium subunit, putative\tLmjF22.1140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1140\tLmjF.22.1140\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3180\tP\tadaptor complex AP-1 medium subunit, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1220\tLmjF.22.1220\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3240\tC\thypothetical protein, conserved\tLmjF22.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1220\tLmjF.22.1220\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3240\tC\thypothetical protein, conserved\tLmjF22.1220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1240\tLmjF.22.1240\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3280\tC\ttranslation initiation factor IF-2, putative\tLmjF22.1240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1300\tATG12\t\tGO:0006914\tPMID:19066473\tIGI\t\tP\tATG12/APG12, putative\tLmjF22.1300\tmRNA\ttaxon:347515\t20090813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1350\tLmjF.22.1350\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3350\tC\tpalmitoyl acyltransferase 11, putative\tLmjF22.1350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1350\tLmjF.22.1350\t\tGO:0005938\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3350\tC\tpalmitoyl acyltransferase 11, putative\tLmjF22.1350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1350\tLmjF.22.1350\t\tGO:0006810\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3350\tP\tpalmitoyl acyltransferase 11, putative\tLmjF22.1350\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1350\tLmjF.22.1350\t\tGO:0006897\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3350\tP\tpalmitoyl acyltransferase 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1350\tLmjF.22.1350\t\tGO:0006810\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3350\tP\tpalmitoyl acyltransferase 11, putative\tLmjF22.1350\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1350\tLmjF.22.1350\t\tGO:0006897\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3350\tP\tpalmitoyl acyltransferase 11, putative\tLmjF22.1350\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1350\tLmjF.22.1350\t\tGO:0018345\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3350\tP\tpalmitoyl acyltransferase 11, putative\tLmjF22.1350\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1360\tFPPS\t\tGO:0004161\tGO_REF:0000002\tISS\tUniProtKB:FPPS_YEAST\tF\tfarnesyl pyrophosphate synthase\tLmjF22.1360\tmRNA\ttaxon:347515\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1360\tFPPS\t\tGO:0004337\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.3360\tF\tfarnesyl pyrophosphate synthase\tLmjF22.1360\tmRNA\ttaxon:347515\t20091001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1360\tFPPS\t\tGO:0004337\tGO_REF:0000002\tISS\tUniProtKB:FPPS_YEAST\tF\tfarnesyl pyrophosphate synthase\tLmjF22.1360\tmRNA\ttaxon:347515\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1360\tFPPS\t\tGO:0005783\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.3360\tC\tfarnesyl pyrophosphate synthase\tLmjF22.1360\tmRNA\ttaxon:347515\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1360\tFPPS\t\tGO:0045337\tGO_REF:0000002\tISS\tUniProtKB:FPPS_YEAST\tP\tfarnesyl pyrophosphate synthase\tLmjF22.1360\tmRNA\ttaxon:347515\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1360\tFPPS\t\tGO:0046872\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.3360\tF\tfarnesyl pyrophosphate synthase\tLmjF22.1360\tmRNA\ttaxon:347515\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1370\tLmjF.22.1370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3370\tC\tintraflagellar transport protein-like protein\tLmjF22.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1370\tLmjF.22.1370\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3370\tC\tintraflagellar transport protein-like protein\tLmjF22.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1380\tLmjF.22.1380\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3380\tC\tmak-16-like RNA binding protein, putative\tLmjF22.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1380\tLmjF.22.1380\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3380\tC\tmak-16-like RNA binding protein, putative\tLmjF22.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1400\tLmjF.22.1400\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3400\tC\thypothetical protein, conserved\tLmjF22.1400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1410\tCentrin4\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3410\tC\tcentrin-4, putative\tLmjF22.1410|Cen1\tmRNA\ttaxon:347515\t20150512\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1410\tCentrin4\t\tGO:0051783\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3410\tP\tcentrin-4, putative\tLmjF22.1410|Cen1\tmRNA\ttaxon:347515\t20150512\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1410\tCentrin4\t\tGO:1902412\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3410\tP\tcentrin-4, putative\tLmjF22.1410|Cen1\tmRNA\ttaxon:347515\t20150512\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1430\tLmjF.22.1430\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3420\tC\tfk506-binding protein 1-like protein\tLmjF22.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1430\tLmjF.22.1430\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.3420\tC\tfk506-binding protein 1-like protein\tLmjF22.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1600\tLmjF.22.1600\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.640\tC\tser/thr protein phosphatase, putative\tLmjF22.1600\tmRNA\ttaxon:347515\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1600\tLmjF.22.1600\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.640\tC\tser/thr protein phosphatase, putative\tLmjF22.1600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1610\tLmjF.22.1610\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.630\tC\thypothetical protein, conserved\tLmjF22.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1620\tLmjF.22.1620\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.620\tC\thypothetical protein, conserved\tLmjF22.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1620\tLmjF.22.1620\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.620\tC\thypothetical protein, 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Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0040\tLmjF.23.0040\t\tGO:0015042\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1990\tF\tperoxidoxin\tLmjF23.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0040\tLmjF.23.0040\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.1990\tC\tperoxidoxin\tLmjF23.0040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0050\tCYP11\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2000\tC\tcyclophilin 11, putative\tLmjF23.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0050\tCYP11\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2000\tC\tcyclophilin 11, putative\tLmjF23.0050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0050\tCYP11\t\tGO:0006364\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2000\tP\tcyclophilin 11, putative\tLmjF23.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0050\tCYP11\t\tGO:0019843\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2000\tF\tcyclophilin 11, putative\tLmjF23.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0090\tLmjF.23.0090\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2040\tC\tDomain of unknown function (DUF1767), putative\tLmjF23.0090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0110\tGDPMP\t\tGO:0004475\tGO_REF:0000002\tISS\t\tF\tGDP-mannose pyrophosphorylase\tEXGMP|LmjF23.0110\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0110\tGDPMP\t\tGO:0005737\tPMID:14718535\tISS\t\tC\tGDP-mannose pyrophosphorylase\tEXGMP|LmjF23.0110\tmRNA\ttaxon:347515\t20100920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0110\tGDPMP\t\tGO:0006486\tGO_REF:0000002\tISS\t\tP\tGDP-mannose pyrophosphorylase\tEXGMP|LmjF23.0110\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0110\tGDPMP\t\tGO:0008928\tPMID:11447107\tIMP\t\tF\tGDP-mannose pyrophosphorylase\tEXGMP|LmjF23.0110\tmRNA\ttaxon:347515\t20090925\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0110\tGDPMP\t\tGO:0009298\tPMID:11447107|PMID:19497128\tIMP\t\tP\tGDP-mannose pyrophosphorylase\tEXGMP|LmjF23.0110\tmRNA\ttaxon:347515\t20090925\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0110\tGDPMP\t\tGO:0009298\tPMID:14718535\tISS\t\tP\tGDP-mannose pyrophosphorylase\tEXGMP|LmjF23.0110\tmRNA\ttaxon:347515\t20100920\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0110\tGDPMP\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2050\tC\tGDP-mannose pyrophosphorylase\tEXGMP|LmjF23.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0110\tGDPMP\t\tGO:0070085\tPMID:11447107\tIMP\t\tP\tGDP-mannose pyrophosphorylase\tEXGMP|LmjF23.0110\tmRNA\ttaxon:347515\t20090925\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0125\tCyP3\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2090\tC\tcyclophilin 3, putative\tLmjF23.0125\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0130\tLmjF.23.0130\t\tGO:0016462\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2100\tF\tvacuolar type h+ ATPase subunit, putative\tLmjF23.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0130\tLmjF.23.0130\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2100\tP\tvacuolar type h+ ATPase subunit, putative\tLmjF23.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0140\tLmjF.23.0140\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2110\tC\tAlpha/beta hydrolase family, putative\tLmjF23.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0160\tLmjF.23.0160\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2130\tC\thypothetical protein, conserved\tLmjF23.0160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0160\tLmjF.23.0160\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\tLmjF23.0160\tmRNA\ttaxon:347515\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0210\tABCC1\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2160\tP\tATP-binding cassette protein subfamily C, member 1, putative\tLmjF23.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0220\tABCC2\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2160\tP\tATP-binding cassette protein subfamily C, member 2, putative\tLmjF23.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0250\tMRPA\t\tGO:0010038\tPMID:15855523\tIEP\t\tP\tABC-thiol transporter\tABCC3|LmjF23.0250|PGPA\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0250\tMRPA\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2160\tP\tABC-thiol transporter\tABCC3|LmjF23.0250|PGPA\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0250\tMRPA\t\tGO:0042626\tPMID:11306588\tIDA\t\tF\tABC-thiol transporter\tABCC3|LmjF23.0250|PGPA\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0250\tMRPA\t\tGO:0043229\tPMID:11306588\tIDA\t\tC\tABC-thiol transporter\tABCC3|LmjF23.0250|PGPA\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0270\tPTR1\t\tGO:0004155\tPMID:21239486\tIDA\t\tF\tpteridine reductase 1\tLmjF23.0270\tmRNA\ttaxon:347515\t20180205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0270\tPTR1\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2210\tC\tpteridine reductase 1\tLmjF23.0270\tmRNA\ttaxon:347515\t20100621\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0270\tPTR1\t\tGO:0016491\tGO_REF:0000011\tISM\tInterPro:IPR002198\tF\tpteridine reductase 1\tLmjF23.0270\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0270\tPTR1\t\tGO:0047040\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2210\tF\tpteridine reductase 1\tLmjF23.0270\tmRNA\ttaxon:347515\t20100621\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0270\tPTR1\t\tGO:0047040\tPMID:21239486\tIDA\t\tF\tpteridine reductase 1\tLmjF23.0270\tmRNA\ttaxon:347515\t20180205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0000723\tPMID:24118609\tIMP\t\tP\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0001933\tPMID:30380080\tIMP\t\tP\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20220408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0003684\tPMID:24118609\tIDA\t\tF\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0005634\tPMID:21291918|PMID:24118609\tIDA\t\tC\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0006260\tPMID:32897188\tIMP\t\tP\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20210129\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0006281\tPMID:21291918\tIMP\t\tP\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20110207\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0006974\tPMID:24118609\tIMP\t\tP\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0007093\tPMID:30380080\tIMP\t\tP\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20190701\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0030896\tPMID:24118609\tIPI\tGeneDB:LmjF.15.0980\tC\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20160107\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0044773\tPMID:30380080\tIMP\t\tP\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20190701\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0300\tLmjF.23.0300\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2240\tC\ttryptophanyl-tRNA synthetase, putative\tLmjF23.0300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0300\tLmjF.23.0300\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2240\tC\ttryptophanyl-tRNA synthetase, putative\tLmjF23.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0320\tLmjF.23.0320\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2290\tC\thypothetical protein, conserved\tLmjF23.0320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0320\tLmjF.23.0320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2290\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0340\tLmjF.23.0340\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2310\tC\t(H+)-ATPase G subunit, putative\tLmjF23.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0340\tLmjF.23.0340\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2310\tP\t(H+)-ATPase G subunit, putative\tLmjF23.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0370\tLmjF.23.0370\t\tGO:0005739\tPMID:18364711\tRCA\t\tC\tcytochrome c oxidase subunit 10, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0380\tABCG5\t\tGO:0020037\tPMID:21255121\tISO\tGeneDB:LinJ.23.0430\tF\tATP-binding cassette protein subfamily G, member 5\tLmjF23.0380\tmRNA\ttaxon:347515\t20110131\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0380\tABCG5\t\tGO:0031982\tPMID:21255121\tISO\tGeneDB:LinJ.23.0430\tC\tATP-binding cassette protein subfamily G, member 5\tLmjF23.0380\tmRNA\ttaxon:347515\t20110131\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0380\tABCG5\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tATP-binding cassette protein subfamily G, member 5\tLmjF23.0380\tmRNA\ttaxon:347515\t20090608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0380\tABCG5\t\tGO:0042803\tPMID:21255121\tISO\tGeneDB:LinJ.23.0430\tF\tATP-binding cassette protein subfamily G, member 5\tLmjF23.0380\tmRNA\ttaxon:347515\t20110131\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0480\tLmjF.23.0480\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2430\tP\thypothetical protein, conserved\tLmjF23.0480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0490\tAMPKB\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2450\tC\tSNF1-related protein kinase regulatory subunit beta, putative\tLmjF23.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0490\tAMPKB\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2450\tC\tSNF1-related protein kinase regulatory subunit beta, putative\tLmjF23.0490\tmRNA\ttaxon:347515\t20150225\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0520\tLmjF.23.0520\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2490\tC\tSET domain containing protein, putative\tLmjF23.0520\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0540\tLmjF.23.0540\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2520\tC\tacetyl-CoA synthetase, putative\tLmjF23.0540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0543\tXRNC\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2810\tC\t5'-3' exoribonuclease C, putative\tLmjF23.0543\tmRNA\ttaxon:347515\t20150319\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0543\tXRNC\t\tGO:0006396\tGO_REF:0000012\tISA\tUniProtKB:O35651\tP\t5'-3' exoribonuclease C, putative\tLmjF23.0543\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0560\tKIN-C\t\tGO:0005871\tPMID:16481395|GO_REF:0000024\tISO\tGeneDB:Tb927.8.2630\tC\tkinetoplastid-specific kinesin, group 2\tLmjF23.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0560\tKIN-C\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinetoplastid-specific kinesin, group 2\tLmjF23.0560\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0560\tKIN-C\t\tGO:0008017\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2630\tF\tkinetoplastid-specific kinesin, group 2\tLmjF23.0560\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0560\tKIN-C\t\tGO:0016887\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2630\tF\tkinetoplastid-specific kinesin, group 2\tLmjF23.0560\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0560\tKIN-C\t\tGO:0043622\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2630\tP\tkinetoplastid-specific kinesin, group 2\tLmjF23.0560\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0620\tLmjF.23.0620\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2600\tC\tWD domain, G-beta repeat/BING4CT (NUC141) domain containing protein, putative\tLmjF23.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0620\tLmjF.23.0620\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2600\tC\tWD domain, G-beta repeat/BING4CT (NUC141) domain containing protein, putative\tLmjF23.0620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0630\tLmjF.23.0630\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2580\tC\texocyst complex component Sec10, putative\tLmjF23.0630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0650\tLmjF.23.0650\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2560\tC\tspliceosomal U5 snRNP-specific protein, putative\tLmjF23.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0680\tPRI1\t\tGO:0003896\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2550\tF\tmitochondrial DNA primase, putative\tLmjF23.0680\tmRNA\ttaxon:347515\t20100204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0680\tPRI1\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2550\tC\tmitochondrial DNA primase, putative\tLmjF23.0680\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0680\tPRI1\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2550\tC\tmitochondrial DNA primase, putative\tLmjF23.0680\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0680\tPRI1\t\tGO:0005759\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2550\tC\tmitochondrial DNA primase, putative\tLmjF23.0680\tmRNA\ttaxon:347515\t20100204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0680\tPRI1\t\tGO:0006264\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2550\tP\tmitochondrial DNA primase, putative\tLmjF23.0680\tmRNA\ttaxon:347515\t20100204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0680\tPRI1\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2550\tC\tmitochondrial DNA primase, putative\tLmjF23.0680\tmRNA\ttaxon:347515\t20120425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0690\tLmjF.23.0690\t\tGO:0003988\tGO_REF:0000002\tISS\t\tF\t3-ketoacyl-CoA thiolase, putative\tLmjF23.0690\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0690\tLmjF.23.0690\t\tGO:0005739\tPMID:15223320|GO_REF:0000024\tISO\tGeneDB:Tb927.8.2540\tC\t3-ketoacyl-CoA thiolase, putative\tLmjF23.0690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0690\tLmjF.23.0690\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2540\tC\t3-ketoacyl-CoA thiolase, putative\tLmjF23.0690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0700\tLmjF.23.0700\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2530\tC\thypothetical protein, conserved\tLmjF23.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0710\tLmjF.23.0710\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2520\tC\tacetyl-CoA synthetase, putative\tLmjF23.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0710\tLmjF.23.0710\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2520\tC\tacetyl-CoA synthetase, putative\tLmjF23.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0710\tLmjF.23.0710\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2520\tC\tacetyl-CoA synthetase, putative\tLmjF23.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0730\tLmjF.23.0730\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2780\tF\tRNA-binding protein, putative\tLmjF23.0730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0730\tLmjF.23.0730\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2780\tP\tRNA-binding protein, putative\tLmjF23.0730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0740\tLmjF.23.0740\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2760\tC\t50S ribosome-binding GTPase, putative\tLmjF23.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0760\tRBP38\t\tGO:0003723\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2740\tF\tmitochondrial RNA binding protein, putative\tLmjF23.0760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0760\tRBP38\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2740\tC\tmitochondrial RNA binding protein, putative\tLmjF23.0760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0760\tRBP38\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2740\tC\tmitochondrial RNA binding protein, putative\tLmjF23.0760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0760\tRBP38\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2740\tC\tmitochondrial RNA binding protein, putative\tLmjF23.0760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0760\tRBP38\t\tGO:0048255\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2740\tP\tmitochondrial RNA binding protein, putative\tLmjF23.0760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0950\tLAP\t\tGO:0030863\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3060\tC\tcytosolic leucyl aminopeptidase\tLmjF23.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0960\tLmjF.23.0960\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3050\tC\thypothetical 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1140\tLmjF.23.1140\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2860\tP\thypothetical protein, conserved\tLmjF23.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1165\tCRN12\t\tGO:0000226\tPMID:19401334\tISO\tGeneDB:LinJ.23.1400\tP\tcoronin, putative\tLmjF23.1165\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1165\tCRN12\t\tGO:0008017\tPMID:19401334\tISO\tGeneDB:LinJ.23.1400\tF\tcoronin, 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{ "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1165\tCRN12\t\tGO:0036064\tPMID:19401334\tISO\tGeneDB:LinJ.23.1400\tC\tcoronin, putative\tLmjF23.1165\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1190\tLmjF.23.1190\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3110\tC\thypothetical protein, conserved\tLmjF23.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1210\tLmjF.23.1210\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3140\tC\tsir2-family protein-like protein\tLmjF23.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1220\tLmjF.23.1220\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3150\tC\tT-complex protein 1, gamma subunit, putative\tLmjF23.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1240\tLmjF.23.1240\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3170\tC\thypothetical protein, conserved\tLmjF23.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1250\tLmjF.23.1250\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3180\tC\tProtein of unknown function (DUF3250), putative\tLmjF23.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1260\tAVO3\t\tGO:0038203\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3200\tP\tRapamycin-insensitive companion of TOR2\tLmjF23.1260|Rictor\tmRNA\ttaxon:347515\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1310\tLmjF.23.1310\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3250\tC\tdynein heavy chain, putative\tLmjF23.1310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1310\tLmjF.23.1310\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3250\tC\tdynein heavy chain, putative\tLmjF23.1310\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1340\tLmjF.23.1340\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3300\tC\thypothetical protein, conserved\tLmjF23.1340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1350\tLmjF.23.1350\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3310\tC\tElongator-like Protein 3b, putative\tLmjF23.1350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1350\tLmjF.23.1350\t\tGO:0005730\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.3310\tC\tElongator-like Protein 3b, putative\tLmjF23.1350\tmRNA\ttaxon:347515\t20110712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1350\tLmjF.23.1350\t\tGO:0005819\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3310\tC\tElongator-like Protein 3b, putative\tLmjF23.1350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1350\tLmjF.23.1350\t\tGO:0032785\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.3310\tP\tElongator-like Protein 3b, putative\tLmjF23.1350\tmRNA\ttaxon:347515\t20110712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1350\tLmjF.23.1350\t\tGO:0043007\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.3310\tP\tElongator-like Protein 3b, putative\tLmjF23.1350\tmRNA\ttaxon:347515\t20110712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1360\tLmjF.23.1360\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3320\tC\thypothetical protein, conserved\tLmjF23.1360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1380\tLmjF.23.1380\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3350\tC\tDNA polymerase theta (helicase domain only), putative\tLmjF23.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1420\tLmjF.23.1420\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb927.8.3400\tP\tpalmitoyl acyltransferase 12, putative\tLmjF23.1420\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1420\tLmjF.23.1420\t\tGO:0006897\tPMID:19240115\tISO\tGeneDB:Tb927.8.3400\tP\tpalmitoyl acyltransferase 12, putative\tLmjF23.1420\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1420\tLmjF.23.1420\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 12, putative\tLmjF23.1420\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1420\tLmjF.23.1420\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb927.8.3400\tP\tpalmitoyl acyltransferase 12, putative\tLmjF23.1420\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1450\tLmjF.23.1450\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1230\tC\tTumour suppressor, Mitostatin, putative\tLmjF23.1450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1460\tLmjF.23.1460\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1250\tC\tGAF domain/TIP41-like family, putative\tLmjF23.1460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1480\tLmjF.23.1480\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1280\tC\talanine racemase, putative\tLmjF23.1480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1480\tLmjF.23.1480\t\tGO:0005829\tPMID:18364711\tRCA\t\tC\talanine racemase, putative\tLmjF23.1480\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1480\tLmjF.23.1480\t\tGO:0008784\tPMID:18364711\tRCA\t\tF\talanine racemase, putative\tLmjF23.1480\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1480\tLmjF.23.1480\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1280\tC\talanine racemase, putative\tLmjF23.1480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1480\tLmjF.23.1480\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1280\tC\talanine racemase, putative\tLmjF23.1480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1510\tVAa\t\tGO:0000331\tPMID:21437209\tISO\tUniProtKB:VATM_DICDI\tC\tvacuolar proton translocating ATPase subunit A, putative\tLmjF23.1510\tmRNA\ttaxon:347515\t20150313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1510\tVAa\t\tGO:0005764\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1300\tC\tvacuolar proton translocating ATPase subunit A, putative\tLmjF23.1510\tmRNA\ttaxon:347515\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1510\tVAa\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1300\tC\tvacuolar proton translocating ATPase subunit A, putative\tLmjF23.1510\tmRNA\ttaxon:347515\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1510\tVAa\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1300\tC\tvacuolar proton translocating ATPase subunit A, putative\tLmjF23.1510\tmRNA\ttaxon:347515\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1510\tVAa\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1300\tP\tvacuolar proton translocating ATPase subunit A, putative\tLmjF23.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1530\tLmjF.23.1530\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1320\tC\thypothetical protein, conserved\tLmjF23.1530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1530\tLmjF.23.1530\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1320\tC\thypothetical protein, conserved\tLmjF23.1530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1540\tLmjF.23.1540\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1330\tC\thypothetical protein, conserved\tLmjF23.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1550\tLmjF.23.1550\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1340\tC\thypothetical protein, conserved\tLmjF23.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1550\tLmjF.23.1550\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1340\tC\thypothetical protein, conserved\tLmjF23.1550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1630\tLmjF.23.1630\t\tGO:0003676\tPMID:21743004\tISO\tGeneDB:Tb927.8.2850\tF\tpoly(A)-specific ribonuclease PARN, putative\tLmjF23.1630\tmRNA\ttaxon:347515\t20120321\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1630\tLmjF.23.1630\t\tGO:0004518\tPMID:21743004|GO_REF:0000024\tISO\tGeneDB:Tb927.8.2850\tF\tpoly(A)-specific ribonuclease PARN, putative\tLmjF23.1630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1630\tLmjF.23.1630\t\tGO:0005737\tPMID:21743004|GO_REF:0000024\tISO\tGeneDB:Tb927.8.2850\tC\tpoly(A)-specific ribonuclease PARN, putative\tLmjF23.1630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1710\tmks1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3430\tC\tMeckel syndrome type 1 protein, putative\tLmjF23.1710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1710\tmks1\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3430\tC\tMeckel syndrome type 1 protein, putative\tLmjF23.1710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1710\tmks1\t\tGO:0036038\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.3430\tC\tMeckel syndrome type 1 protein, putative\tLmjF23.1710\tmRNA\ttaxon:347515\t20140417\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1730\tLmjF.23.1730\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3460\tC\tRING-H2 zinc finger, putative\tLmjF23.1730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1730\tLmjF.23.1730\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3460\tP\tRING-H2 zinc finger, putative\tLmjF23.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1740\tLmjF.23.1740\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.3470\tC\tQb-SNARE protein, putative\tLmjF23.1740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1770\tCSL4\t\tGO:0000177\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1200\tC\texosome component CSL4, putative\tLmjF23.1770\tmRNA\ttaxon:347515\t20150105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1770\tCSL4\t\tGO:0000460\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1200\tP\texosome component CSL4, putative\tLmjF23.1770\tmRNA\ttaxon:347515\t20150105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1770\tCSL4\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1200\tC\texosome component CSL4, putative\tLmjF23.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0010\tLmjF.24.0010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4780\tC\tpyruvate dehydrogenase (lipoamide) kinase, putative\tLmjF24.0010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0010\tLmjF.24.0010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4780\tC\tpyruvate dehydrogenase (lipoamide) kinase, putative\tLmjF24.0010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0010\tLmjF.24.0010\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4780\tC\tpyruvate dehydrogenase (lipoamide) kinase, putative\tLmjF24.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0020\tLmjF.24.0020\t\tGO:0000331\tPMID:21437209\tISO\tGeneDB:TcCLB.503449.30\tC\tclathrin coat assembly protein, putative\tLmjF24.0020\tmRNA\ttaxon:347515\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0020\tLmjF.24.0020\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4800\tC\tclathrin coat assembly protein, putative\tLmjF24.0020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0020\tLmjF.24.0020\t\tGO:0006898\tGO_REF:0000002\tIEA\t\tP\tclathrin coat assembly protein, putative\tLmjF24.0020\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0020\tLmjF.24.0020\t\tGO:0030132\tGO_REF:0000002\tIEA\t\tC\tclathrin coat assembly protein, putative\tLmjF24.0020\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0020\tLmjF.24.0020\t\tGO:0030276\tGO_REF:0000002\tIEA\t\tF\tclathrin coat assembly protein, putative\tLmjF24.0020\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0040\tLmjF.24.0040\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4820\tC\t60S ribosomal protein L17, putative\tLmjF24.0040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0060\tLmjF.24.0060\t\tGO:1990900\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4840\tC\thypothetical protein, conserved\tLmjF24.0060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0070\tLmjF.24.0070\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4850\tC\thypothetical protein, conserved\tLmjF24.0070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0080\tLmjF.24.0080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4860\tC\tRing finger domain containing protein, putative\tLmjF24.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0080\tLmjF.24.0080\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4860\tC\tRing finger domain containing protein, putative\tLmjF24.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0090\tLmjF.24.0090\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4870\tC\thypothetical protein, conserved\tLmjF24.0090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0090\tLmjF.24.0090\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4870\tP\thypothetical protein, conserved\tLmjF24.0090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0090\tLmjF.24.0090\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4870\tC\thypothetical protein, conserved\tLmjF24.0090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0100\tLmjF.24.0100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4880\tC\tCalmodulin-binding, putative\tLmjF24.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0100\tLmjF.24.0100\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4880\tC\tCalmodulin-binding, putative\tLmjF24.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0110\tLmjF.24.0110\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4890\tC\tpoly A polymerase regulatory subunit, putative\tLmjF24.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0130\tLmjF.24.0130\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4900\tC\tguanine nucleotide-binding beta subunit-like protein\tLmjF24.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0140\tLmjF.24.0140\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4910\tC\tankyrin/TPR repeat protein\tLmjF24.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0170\tLmjF.24.0170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4930\tC\thypothetical protein, conserved\tLmjF24.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0170\tLmjF.24.0170\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4930\tC\thypothetical protein, conserved\tLmjF24.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0190\tLmjF.24.0190\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4950\tC\thypothetical protein, conserved\tLmjF24.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0190\tLmjF.24.0190\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.4950\tC\thypothetical protein, conserved\tLmjF24.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0240\tLmjF.24.0240\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4970\tC\tWD repeat protein\tLmjF24.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0250\tLmjF.24.0250\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4980\tC\tATP-dependent DEAD/H RNA helicase, putative\tLmjF24.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0250\tLmjF.24.0250\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4980\tC\tATP-dependent DEAD/H RNA helicase, putative\tLmjF24.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0280\tDNAI1\t\tGO:0003774\tGO_REF:0000012\tISA\tUniProtKB:Q16959\tF\tDynein intermediate chain 1, axonemal\tLmjF24.0280|IC78\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0280\tDNAI1\t\tGO:0005856\tGO_REF:0000012\tISA\tUniProtKB:Q16959\tC\tDynein intermediate chain 1, axonemal\tLmjF24.0280|IC78\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0280\tDNAI1\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5000\tC\tDynein intermediate chain 1, axonemal\tLmjF24.0280|IC78\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0280\tDNAI1\t\tGO:0007018\tGO_REF:0000012\tISA\tUniProtKB:Q13409\tP\tDynein intermediate chain 1, axonemal\tLmjF24.0280|IC78\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0280\tDNAI1\t\tGO:0030286\tGO_REF:0000012\tISA\tUniProtKB:Q9UI46\tC\tDynein intermediate chain 1, axonemal\tLmjF24.0280|IC78\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0280\tDNAI1\t\tGO:0043056\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5000\tP\tDynein intermediate chain 1, axonemal\tLmjF24.0280|IC78\tmRNA\ttaxon:347515\t20150731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0280\tDNAI1\t\tGO:0060294\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5000\tP\tDynein intermediate chain 1, axonemal\tLmjF24.0280|IC78\tmRNA\ttaxon:347515\t20150731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0290\tLmjF.24.0290\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5010\tC\tNLI interacting factor-like phosphatase, putative\tLmjF24.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0300\tLmjF.24.0300\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5020\tC\thypothetical protein, conserved\tLmjF24.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0310\tLmjF.24.0310\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5030\tC\thypothetical protein, conserved\tLmjF24.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0320\tLmjF.24.0320\t\tGO:0004333\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5050\tF\tfumarate hydratase, putative\tLmjF24.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0320\tLmjF.24.0320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5050\tC\tfumarate hydratase, putative\tLmjF24.0320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0320\tLmjF.24.0320\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5050\tC\tfumarate hydratase, putative\tLmjF24.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0330\tLmjF.24.0330\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5060\tC\tMitochondrial small ribosomal subunit Rsm22, putative\tLmjF24.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0340\tGPI13\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5070\tC\tGPI ethanolamine phosphate transferase 3, 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0360\tLPG5A\t\tGO:0000139\tPMID:17347153\tIGI\tUniProtKB:Q9R0M8\tC\tUDP-galactose transporter\tLmjF24.0360\tmRNA\ttaxon:347515\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0360\tLPG5A\t\tGO:0005459\tPMID:17347153\tIGI\tUniProtKB:Q9R0M8\tF\tUDP-galactose transporter\tLmjF24.0360\tmRNA\ttaxon:347515\t20160126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0360\tLPG5A\t\tGO:0072334\tPMID:17347153\tIGI\tUniProtKB:Q9R0M8\tP\tUDP-galactose 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0370\tLmjF.24.0370\t\tGO:0019509\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5090\tP\taspartate aminotransferase, putative\tLmjF24.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0370\tLmjF.24.0370\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5090\tC\taspartate aminotransferase, putative\tLmjF24.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0370\tLmjF.24.0370\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5090\tC\taspartate aminotransferase, putative\tLmjF24.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0460\tLmjF.24.0460\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5170\tC\tubiquitin-activating enzyme, putative\tLmjF24.0460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0490\tLmjF.24.0490\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5190\tC\tLeucine Rich repeats (2 copies)/Leucine rich repeat, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0500\tLmjF.24.0500\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5200\tC\thypothetical protein, conserved\tLmjF24.0500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0520\tLmjF.24.0520\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5220\tC\tDNAJ domain protein, putative\tLmjF24.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0520\tLmjF.24.0520\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5220\tC\tDNAJ domain protein, 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0610\tLmjF.24.0610\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5260\tC\tSNF2 family protein\tLmjF24.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0610\tLmjF.24.0610\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5260\tC\tSNF2 family protein\tLmjF24.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0620\tLmjF.24.0620\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5270\tC\tubiquitin carboxyl-terminal 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0640\tKIN13-3\tNOT\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5300\tC\tKinesin-13 3, putative\tLmjF24.0640|Kif13-3\tmRNA\ttaxon:347515\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0640\tKIN13-3\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5300\tC\tKinesin-13 3, putative\tLmjF24.0640|Kif13-3\tmRNA\ttaxon:347515\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0640\tKIN13-3\tNOT\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5300\tC\tKinesin-13 3, putative\tLmjF24.0640|Kif13-3\tmRNA\ttaxon:347515\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0640\tKIN13-3\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5300\tC\tKinesin-13 3, putative\tLmjF24.0640|Kif13-3\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0640\tKIN13-3\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5300\tC\tKinesin-13 3, putative\tLmjF24.0640|Kif13-3\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0640\tKIN13-3\t\tGO:0097542\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5300\tC\tKinesin-13 3, putative\tLmjF24.0640|Kif13-3\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0650\tLmjF.24.0650\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5310\tC\tPPPDE putative peptidase domain containing protein, putative\tLmjF24.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0670\tLmjF.24.0670\t\tGO:1902412\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5340\tP\tCell division protein kinase, putative\tLmjF24.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0680\tLmjF.24.0680\t\tGO:0005365\tPMID:7565702|PMID:8663013|PMID:19497128\tIDA\t\tF\tmyo-inositol/proton symporter (MIT)\tLmjF24.0680\tmRNA\ttaxon:347515\t20090728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0680\tLmjF.24.0680\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5350\tC\tmyo-inositol/proton symporter (MIT)\tLmjF24.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0680\tLmjF.24.0680\t\tGO:0015798\tPMID:7565702|PMID:8663013|PMID:19497128\tIDA\t\tP\tmyo-inositol/proton symporter (MIT)\tLmjF24.0680\tmRNA\ttaxon:347515\t20090728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0730\tLmjF.24.0730\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5400\tC\tsignal recognition particle, putative\tLmjF24.0730\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0750\tLmjF.24.0750\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5420\tC\thypothetical protein, conserved\tLmjF24.0750\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0760\tLmjF.24.0760\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5430\tC\tDNA repair and recombination protein RAD54, putative\tLmjF24.0760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0770\tLmjF.24.0770\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5440\tC\tmalic enzyme, putative\tLmjF24.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0770\tLmjF.24.0770\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5440\tC\tmalic enzyme, putative\tLmjF24.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0790\tLmjF.24.0790\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5470\tC\thypothetical protein, conserved\tLmjF24.0790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0810\tLmjF.24.0810\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5480\tC\tphosphotransferase, putative\tLmjF24.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0820\tLmjF.24.0820\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5490\tC\tinositol polyphosphate phosphatase, putative\tLmjF24.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0830\tLmjF.24.0830\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5500\tC\tMitochondrial SSU ribosomal protein, putative\tLmjF24.0830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0840\tLmjF.24.0840\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5510\tC\tdynein arm light chain, putative\tLmjF24.0840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0850\tTIM\t\tGO:0004807\tPMID:31992784\tIDA\t\tF\ttriosephosphate isomerase\tLmjF24.0850\tmRNA\ttaxon:347515\t20200721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0850\tTIM\t\tGO:0004807\tGO_REF:0000024\tISO\tGeneDB:LmxM.24.0850\tF\ttriosephosphate isomerase\tLmjF24.0850\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0850\tTIM\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5520\tC\ttriosephosphate isomerase\tLmjF24.0850\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0850\tTIM\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:LmxM.24.0850\tC\ttriosephosphate isomerase\tLmjF24.0850\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0850\tTIM\t\tGO:0006096\tGO_REF:0000024\tISO\tGeneDB:LmxM.24.0850\tP\ttriosephosphate isomerase\tLmjF24.0850\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0850\tTIM\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:LmxM.24.0850\tC\ttriosephosphate isomerase\tLmjF24.0850\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0860\tLmjF.24.0860\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5530\tC\thypothetical protein, conserved\tLmjF24.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0860\tLmjF.24.0860\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5530\tC\thypothetical protein, conserved\tLmjF24.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0860\tLmjF.24.0860\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5530\tC\thypothetical protein, conserved\tLmjF24.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0870\tLmjF.24.0870\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5540\tC\temp24/gp25L/p24 family/GOLD, putative\tLmjF24.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0890\tPOLQ\t\tGO:0003887\tGO_REF:0000024\tISO\tGeneDB:LinJ.24.0910\tF\tDNA polymerase theta\tLmjF24.0890\tmRNA\ttaxon:347515\t20160704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0890\tPOLQ\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:LinJ.24.0910\tC\tDNA polymerase theta\tLmjF24.0890\tmRNA\ttaxon:347515\t20160704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0890\tPOLQ\t\tGO:0019985\tGO_REF:0000024\tISO\tGeneDB:LinJ.24.0910\tP\tDNA polymerase theta\tLmjF24.0890\tmRNA\ttaxon:347515\t20160704\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0900\tLmjF.24.0900\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5560\tC\thypothetical protein, conserved\tLmjF24.0900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0900\tLmjF.24.0900\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5560\tC\thypothetical protein, conserved\tLmjF24.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0900\tLmjF.24.0900\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5560\tC\thypothetical protein, conserved\tLmjF24.0900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0910\tLmjF.24.0910\t\tGO:0003677\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5570\tF\tDNA replication licensing factor MCM5, putative\tLmjF24.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0910\tLmjF.24.0910\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5570\tC\tDNA replication licensing factor MCM5, putative\tLmjF24.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0910\tLmjF.24.0910\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5570\tC\tDNA replication licensing factor MCM5, putative\tLmjF24.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0910\tLmjF.24.0910\t\tGO:0006270\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5570\tP\tDNA replication licensing factor MCM5, putative\tLmjF24.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0910\tLmjF.24.0910\t\tGO:0042555\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5570\tC\tDNA replication licensing factor MCM5, putative\tLmjF24.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0910\tLmjF.24.0910\t\tGO:0044786\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5570\tP\tDNA replication licensing factor MCM5, putative\tLmjF24.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0910\tLmjF.24.0910\t\tGO:0071162\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5570\tC\tDNA replication licensing factor MCM5, putative\tLmjF24.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0930\tLmjF.24.0930\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5590\tC\thypothetical protein, conserved\tLmjF24.0930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0940\tATOM14\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5600\tC\tArchaic Translocase of outer membrane 14 kDa subunit, putative\tLmjF24.0940|POMP14\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0940\tATOM14\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5600\tC\tArchaic Translocase of outer membrane 14 kDa subunit, putative\tLmjF24.0940|POMP14\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0940\tATOM14\t\tGO:0005742\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5600\tC\tArchaic Translocase of outer membrane 14 kDa subunit, putative\tLmjF24.0940|POMP14\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0940\tATOM14\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5600\tP\tArchaic Translocase of outer membrane 14 kDa subunit, putative\tLmjF24.0940|POMP14\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0940\tATOM14\t\tGO:0030150\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5600\tP\tArchaic Translocase of outer membrane 14 kDa subunit, putative\tLmjF24.0940|POMP14\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0950\tLmjF.24.0950\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5610\tC\tRab-GTPase-TBC domain containing protein, putative\tLmjF24.0950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 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"TriTrypDB\tLmjF.24.0970\tLmjF.24.0970\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5630\tC\thypothetical protein, conserved\tLmjF24.0970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0970\tLmjF.24.0970\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5630\tC\thypothetical protein, conserved\tLmjF24.0970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0990\tLmjF.24.0990\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5650\tC\treplication factor C, subunit 1, putative\tLmjF24.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0990\tLmjF.24.0990\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5650\tC\treplication factor C, subunit 1, putative\tLmjF24.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1010\tLmjF.24.1010\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5670\tC\tMnd1 family, putative\tLmjF24.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1010\tLmjF.24.1010\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5670\tC\tMnd1 family, putative\tLmjF24.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1030\tLmjF.24.1030\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5680\tC\tdynein light chain, putative\tLmjF24.1030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1030\tLmjF.24.1030\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5680\tC\tdynein light chain, putative\tLmjF24.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1030\tLmjF.24.1030\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5680\tC\tdynein light chain, putative\tLmjF24.1030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1030\tLmjF.24.1030\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5680\tP\tdynein light chain, putative\tLmjF24.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1030\tLmjF.24.1030\t\tGO:0070286\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5680\tP\tdynein light chain, putative\tLmjF24.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1080\tJ29\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5710\tC\tDNAJ domain protein, putative\tLmjF24.1080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1080\tJ29\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5710\tC\tDNAJ domain protein, putative\tLmjF24.1080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1090\tLmjF.24.1090\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5720\tC\thypothetical predicted multipass transmembrane protein\tLmjF24.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1090\tLmjF.24.1090\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5720\tC\thypothetical predicted multipass transmembrane protein\tLmjF24.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1090\tLmjF.24.1090\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5720\tC\thypothetical predicted multipass transmembrane protein\tLmjF24.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1090\tLmjF.24.1090\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5720\tC\thypothetical predicted multipass transmembrane protein\tLmjF24.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1100\tLmjF.24.1100\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5730\tC\tpre-mRNA-splicing factor ATP-dependent RNA helicase, putative\tLmjF24.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1110\tLmjF.24.1110\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5740\tC\tformin-like protein\tLmjF24.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1110\tLmjF.24.1110\t\tGO:0051286\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5740\tC\tformin-like protein\tLmjF24.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1140\tLmjF.24.1140\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5760\tC\thypothetical protein, conserved\tLmjF24.1140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1150\tMTRNAP\t\tGO:0001065\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5780\tF\tDNA-directed RNA polymerase, mitochondrial\tLmjF24.1150\tmRNA\ttaxon:347515\t20150622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1150\tMTRNAP\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5780\tC\tDNA-directed RNA polymerase, mitochondrial\tLmjF24.1150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1150\tMTRNAP\t\tGO:0006264\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5780\tP\tDNA-directed RNA polymerase, mitochondrial\tLmjF24.1150\tmRNA\ttaxon:347515\t20150622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1150\tMTRNAP\t\tGO:0006390\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5780\tP\tDNA-directed RNA polymerase, mitochondrial\tLmjF24.1150\tmRNA\ttaxon:347515\t20150622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1150\tMTRNAP\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.5780\tC\tDNA-directed RNA polymerase, mitochondrial\tLmjF24.1150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1170\tLmjF.24.1170\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5800\tC\thypothetical protein, conserved\tLmjF24.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1200\tLmjF.24.1200\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5830\tC\thypothetical protein, conserved\tLmjF24.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1200\tLmjF.24.1200\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5830\tC\thypothetical protein, conserved\tLmjF24.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1210\tEIF1\t\tGO:0005515\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tF\tEukaryotic translation initiation factor 1, 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RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1220\tRBP38\t\tGO:0003723\tGO_REF:0000011\tISO\tPfam:PF00076|GeneDB:Tb927.11.5850\tF\tRNA-binding protein 38, putative\tLmjF24.1220\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1220\tRBP38\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5850\tF\tRNA-binding protein 38, putative\tLmjF24.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1230\tLmjF.24.1230\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5870\tC\thypothetical protein, conserved\tLmjF24.1230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1240\tLmjF.24.1240\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5880\tC\thypothetical protein, conserved\tLmjF24.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1240\tLmjF.24.1240\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5880\tC\thypothetical protein, conserved\tLmjF24.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1240\tLmjF.24.1240\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5880\tC\thypothetical protein, conserved\tLmjF24.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1240\tLmjF.24.1240\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5880\tC\thypothetical protein, conserved\tLmjF24.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1240\tLmjF.24.1240\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5880\tC\thypothetical protein, conserved\tLmjF24.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1240\tLmjF.24.1240\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5880\tC\thypothetical protein, conserved\tLmjF24.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1300\tJ58\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5920\tC\tDNAJ-domain protein, putative\tLmjF24.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1300\tJ58\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5920\tC\tDNAJ-domain protein, putative\tLmjF24.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1330\tLmjF.24.1330\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6890\tC\thypothetical protein, conserved\tLmjF24.1330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1330\tLmjF.24.1330\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6890\tC\thypothetical protein, conserved\tLmjF24.1330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1340\tLmjF.24.1340\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6880\tC\ttranslation initiation factor IF-2, putative\tLmjF24.1340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1340\tLmjF.24.1340\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6880\tC\ttranslation initiation factor IF-2, putative\tLmjF24.1340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1360\tLmjF.24.1360\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6860\tC\tDyggve-Melchior-Clausen syndrome protein, putative\tLmjF24.1360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1360\tLmjF.24.1360\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6860\tC\tDyggve-Melchior-Clausen syndrome protein, putative\tLmjF24.1360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1360\tLmjF.24.1360\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6860\tC\tDyggve-Melchior-Clausen syndrome protein, putative\tLmjF24.1360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1380\tLmjF.24.1380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6850\tC\tZinc finger, C3HC4 type (RING finger)/EF-hand domain pair, putative\tLmjF24.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1380\tLmjF.24.1380\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6850\tC\tZinc finger, C3HC4 type (RING finger)/EF-hand domain pair, putative\tLmjF24.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1380\tLmjF.24.1380\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6850\tC\tZinc finger, C3HC4 type (RING finger)/EF-hand domain pair, putative\tLmjF24.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1390\tLmjF.24.1390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6850\tC\tZinc finger, C3HC4 type (RING finger)/EF-hand domain pair, putative\tLmjF24.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1390\tLmjF.24.1390\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6850\tC\tZinc finger, C3HC4 type (RING finger)/EF-hand domain pair, putative\tLmjF24.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1390\tLmjF.24.1390\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6850\tC\tZinc finger, C3HC4 type (RING finger)/EF-hand domain pair, putative\tLmjF24.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1420\tLmjF.24.1420\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6840\tC\tmismatch repair protein, putative\tLmjF24.1420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1420\tLmjF.24.1420\t\tGO:0006298\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6840\tP\tmismatch repair protein, putative\tLmjF24.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1430\tLmjF.24.1430\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6830\tC\tkinesin, putative\tLmjF24.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1430\tLmjF.24.1430\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6830\tC\tkinesin, putative\tLmjF24.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1490\tLmjF.24.1490\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6770\tC\tWD domain, G-beta repeat, putative\tLmjF24.1490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1500\tLmjF.24.1500\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6750\tC\ttranslationally controlled tumor protein (TCTP), putative\tLmjF24.1500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1500\tLmjF.24.1500\t\tGO:0005739\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.6750\tC\ttranslationally controlled tumor protein (TCTP), putative\tLmjF24.1500\tmRNA\ttaxon:347515\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1500\tLmjF.24.1500\t\tGO:0006412\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.6750\tP\ttranslationally controlled tumor protein (TCTP), putative\tLmjF24.1500\tmRNA\ttaxon:347515\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1500\tLmjF.24.1500\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6750\tC\ttranslationally 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1570\tLmjF.24.1570\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6650\tC\tRNA recognition motif. 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1630\tSDH1\t\tGO:0000104\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01812\tF\tSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial\tLmjF24.1630\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1630\tSDH1\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511909.40\tC\tSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial\tLmjF24.1630\tmRNA\ttaxon:347515\t20150318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1660\tLmjF.24.1660\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6560\tC\tSpoU rRNA Methylase family, putative\tLmjF24.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1660\tLmjF.24.1660\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6560\tC\tSpoU rRNA Methylase family, putative\tLmjF24.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1710\tLmjF.24.1710\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6510\tC\tubiquitin-conjugating enzyme E2, putative\tLmjF24.1710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1710\tLmjF.24.1710\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6510\tC\tubiquitin-conjugating enzyme E2, putative\tLmjF24.1710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1710\tLmjF.24.1710\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6510\tC\tubiquitin-conjugating enzyme E2, putative\tLmjF24.1710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1720\tCDC20\t\tGO:0000278\tGO_REF:0000024\tISO\tGeneDB:LdBPK_241790.1\tP\tcell division cycle protein 20, putative\tLmjF24.1720\tmRNA\ttaxon:347515\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1720\tCDC20\t\tGO:0051726\tGO_REF:0000024\tISO\tGeneDB:LdBPK_241790.1\tP\tcell division cycle protein 20, putative\tLmjF24.1720\tmRNA\ttaxon:347515\t20150312\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1730\tLmjF.24.1730\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6490\tC\tCalcium/calmodulin-dependent protein kinase kinase, putative\tLmjF24.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1740\tIBA57\t\tGO:0005542\tPMID:20489182\tIGI\tUniProtKB:P0ADE8\tF\tfolate-binding protein YgfZ, putative\tLmjF24.1740|YGFZ\tmRNA\ttaxon:347515\t20160107\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1740\tIBA57\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6480\tC\tfolate-binding protein YgfZ, putative\tLmjF24.1740|YGFZ\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1740\tIBA57\t\tGO:0005829\tPMID:20489182\tIGI\tUniProtKB:P0ADE8\tC\tfolate-binding protein YgfZ, putative\tLmjF24.1740|YGFZ\tmRNA\ttaxon:347515\t20160107\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1740\tIBA57\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6480\tC\tfolate-binding protein YgfZ, putative\tLmjF24.1740|YGFZ\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1750\tLmjF.24.1750\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6470\tC\tSET domain containing protein, putative\tLmjF24.1750\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1750\tLmjF.24.1750\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6470\tC\tSET domain containing protein, putative\tLmjF24.1750\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1750\tLmjF.24.1750\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6470\tC\tSET domain containing protein, putative\tLmjF24.1750\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1760\tLmjF.24.1760\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6460\tC\thypothetical protein, conserved\tLmjF24.1760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1770\tICP\t\tGO:0002020\tPMID:15554964\tISO\tGeneDB:LmxM.24.1770\tF\tinhibitor of cysteine peptidase\tLmjF24.1770\tmRNA\ttaxon:347515\t20110801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1770\tICP\t\tGO:0004866\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6450\tF\tinhibitor of cysteine peptidase\tLmjF24.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1770\tICP\t\tGO:0005783\tPMID:15554964\tISO\tGeneDB:LmxM.24.1770\tC\tinhibitor of cysteine peptidase\tLmjF24.1770\tmRNA\ttaxon:347515\t20110801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1770\tICP\t\tGO:0005794\tPMID:15554964\tISO\tGeneDB:LmxM.24.1770\tC\tinhibitor of cysteine peptidase\tLmjF24.1770\tmRNA\ttaxon:347515\t20110801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1770\tICP\t\tGO:0030162\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6450\tP\tinhibitor of cysteine peptidase\tLmjF24.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1770\tICP\t\tGO:0031982\tPMID:15554964\tISO\tGeneDB:LmxM.24.1770\tC\tinhibitor of cysteine peptidase\tLmjF24.1770\tmRNA\ttaxon:347515\t20110801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1790\tLmjF.24.1790\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF24.1790\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1790\tLmjF.24.1790\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6440\tC\tRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF24.1790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1790\tLmjF.24.1790\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6440\tC\tRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF24.1790\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1800\tLmjF.24.1800\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6430\tC\thypothetical protein, conserved\tLmjF24.1800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1800\tLmjF.24.1800\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6430\tC\thypothetical protein, conserved\tLmjF24.1800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1800\tLmjF.24.1800\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6430\tC\thypothetical protein, conserved\tLmjF24.1800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1810\tLmjF.24.1810\t\tGO:0004316\tPMID:17166831|GO_REF:0000024\tISO\tGeneDB:Tb927.8.6420\tF\tbeta-ketoacyl-ACP reductase 2, putative\tLmjF24.1810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1810\tLmjF.24.1810\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6420\tC\tbeta-ketoacyl-ACP reductase 2, putative\tLmjF24.1810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1810\tLmjF.24.1810\t\tGO:0005739\tPMID:17166831|GO_REF:0000024\tISO\tGeneDB:Tb927.8.6420\tC\tbeta-ketoacyl-ACP reductase 2, putative\tLmjF24.1810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1810\tLmjF.24.1810\t\tGO:0030497\tPMID:17166831|GO_REF:0000024\tISO\tGeneDB:Tb927.8.6420\tP\tbeta-ketoacyl-ACP reductase 2, putative\tLmjF24.1810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1820\tLmjF.24.1820\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6410\tC\tshort chain dehydrogenase/reductase, putative\tLmjF24.1820\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1820\tLmjF.24.1820\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6410\tC\tshort chain dehydrogenase/reductase, putative\tLmjF24.1820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1830\tLmjF.24.1830\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6400\tC\thypothetical protein, conserved\tLmjF24.1830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1830\tLmjF.24.1830\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6400\tC\thypothetical protein, conserved\tLmjF24.1830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1830\tLmjF.24.1830\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6400\tC\thypothetical protein, conserved\tLmjF24.1830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1840\tLmjF.24.1840\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6390\tC\tlysophospholipase, putative\tLmjF24.1840\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1840\tLmjF.24.1840\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6390\tC\tlysophospholipase, putative\tLmjF24.1840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1900\tLmjF.24.1900\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6330\tC\tWD domain, G-beta repeat/PFU (PLAA family ubiquitin binding), putative\tLmjF24.1900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1940\tLmjF.24.1940\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6120\tC\thypothetical protein, conserved\tLmjF24.1940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1970\tNUP76\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6250\tC\tNucleoporin NUP76\tLmjF24.1970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1970\tNUP76\t\tGO:0006406\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6250\tP\tNucleoporin NUP76\tLmjF24.1970\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1970\tNUP76\t\tGO:0044612\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6250\tC\tNucleoporin NUP76\tLmjF24.1970\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1980\tLmjF.24.1980\t\tGO:0005856\tPMID:22355359|GO_REF:0000024\tISO\tGeneDB:Tb927.8.6240\tC\tSTOP axonemal protein, putative\tLmjF24.1980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1980\tLmjF.24.1980\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6240\tC\tSTOP axonemal protein, putative\tLmjF24.1980\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1980\tLmjF.24.1980\t\tGO:0008017\tPMID:22355359|GO_REF:0000024\tISO\tGeneDB:Tb927.8.6240\tF\tSTOP axonemal protein, putative\tLmjF24.1980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1980\tLmjF.24.1980\t\tGO:0034453\tPMID:22355359|GO_REF:0000024\tISO\tGeneDB:Tb927.8.6240\tP\tSTOP axonemal protein, putative\tLmjF24.1980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1990\tLmjF.24.1990\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6230\tC\thypothetical protein, conserved\tLmjF24.1990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2000\tLmjF.24.2000\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6220\tC\tPhosphorylated CTD interacting factor 1 WW domain containing protein, putative\tLmjF24.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2000\tLmjF.24.2000\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6220\tC\tPhosphorylated CTD interacting factor 1 WW domain containing protein, putative\tLmjF24.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2010\tLmjF.24.2010\t\tGO:0005942\tGO_REF:0000002\tISS\t\tC\tphosphatidylinositol 3-kinase, putative\tLmjF24.2010\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2010\tLmjF.24.2010\t\tGO:0016303\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.8.6210\tF\tphosphatidylinositol 3-kinase, putative\tLmjF24.2010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2010\tLmjF.24.2010\t\tGO:0016773\tGO_REF:0000002\tISS\t\tF\tphosphatidylinositol 3-kinase, putative\tLmjF24.2010\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2010\tLmjF.24.2010\t\tGO:0046854\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.8.6210\tP\tphosphatidylinositol 3-kinase, putative\tLmjF24.2010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2020\tLmjF.24.2020\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6200\tC\ttubulin folding cofactor D, putative\tLmjF24.2020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2050\tLmjF.24.2050\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6180\tC\t60S ribosomal protein L26, putative\tLmjF24.2050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2050\tLmjF.24.2050\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6180\tC\t60S ribosomal protein L26, putative\tLmjF24.2050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2050\tLmjF.24.2050\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6180\tC\t60S ribosomal protein L26, putative\tLmjF24.2050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2050\tLmjF.24.2050\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6180\tC\t60S ribosomal protein L26, putative\tLmjF24.2050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2060\tLmjF.24.2060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6170\tC\ttransketolase\tLmjF24.2060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2060\tLmjF.24.2060\t\tGO:0005829\tPMID:15149284\tEXP\t\tC\ttransketolase\tLmjF24.2060\tmRNA\ttaxon:347515\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2060\tLmjF.24.2060\t\tGO:0009052\tPMID:15149284\tIDA\t\tP\ttransketolase\tLmjF24.2060\tmRNA\ttaxon:347515\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2060\tLmjF.24.2060\t\tGO:0020015\tPMID:15149284\tEXP\t\tC\ttransketolase\tLmjF24.2060\tmRNA\ttaxon:347515\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2060\tLmjF.24.2060\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6170\tC\ttransketolase\tLmjF24.2060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2060\tLmjF.24.2060\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6170\tC\ttransketolase\tLmjF24.2060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2060\tLmjF.24.2060\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6170\tC\ttransketolase\tLmjF24.2060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2070\tLmjF.24.2070\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6150\tC\t40S ribosomal protein S8, putative\tLmjF24.2070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2070\tLmjF.24.2070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6160\tC\t40S ribosomal protein S8, putative\tLmjF24.2070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2080\tLmjF.24.2080\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6150\tC\t40S ribosomal protein S8, putative\tLmjF24.2080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2080\tLmjF.24.2080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6160\tC\t40S ribosomal protein S8, putative\tLmjF24.2080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2100\tLmjF.24.2100\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6130\tC\thypothetical protein, conserved\tLmjF24.2100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2100\tLmjF.24.2100\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6130\tC\thypothetical protein, conserved\tLmjF24.2100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2110\tHMGS\t\tGO:0004421\tGO_REF:0000012\tISA\tUniProtKB:HMCS_YEAST\tF\t3-hydroxy-3-methylglutaryl-CoA synthase, putative\tLmjF24.2110\tmRNA\ttaxon:347515\t20140808\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2110\tHMGS\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6110\tC\t3-hydroxy-3-methylglutaryl-CoA synthase, putative\tLmjF24.2110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2110\tHMGS\t\tGO:0006696\tGO_REF:0000012\tISA\tUniProtKB:HMCS_YEAST\tP\t3-hydroxy-3-methylglutaryl-CoA synthase, putative\tLmjF24.2110\tmRNA\ttaxon:347515\t20140808\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2120\tLmjF.24.2120\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6100\tC\thypothetical protein, conserved\tLmjF24.2120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2160\tPOMP42\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6080\tC\tPresent in the outer mitochondrial membrane proteome 42\tLmjF24.2160\tmRNA\ttaxon:347515\t20150929\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2160\tPOMP42\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6080\tP\tPresent in the outer mitochondrial membrane proteome 42\tLmjF24.2160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2180\tTBBC\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511071.130\tC\tTrypanosome basal body component protein\tLmjF24.2180\tmRNA\ttaxon:347515\t20150318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2180\tTBBC\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6070\tC\tTrypanosome basal body component protein\tLmjF24.2180\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2180\tTBBC\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6070\tC\tTrypanosome basal body component protein\tLmjF24.2180\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2180\tTBBC\t\tGO:0008092\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6070\tF\tTrypanosome basal body component protein\tLmjF24.2180\tmRNA\ttaxon:347515\t20150803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2180\tTBBC\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6070\tP\tTrypanosome basal body component protein\tLmjF24.2180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2180\tTBBC\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6070\tC\tTrypanosome basal body component protein\tLmjF24.2180\tmRNA\ttaxon:347515\t20150803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2180\tTBBC\t\tGO:0060271\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6070\tP\tTrypanosome basal body component protein\tLmjF24.2180\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2190\tLmjF.24.2190\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6050\tC\thypothetical protein, conserved\tLmjF24.2190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2190\tLmjF.24.2190\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6050\tC\thypothetical protein, conserved\tLmjF24.2190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2200\tLmjF.24.2200\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6040\tC\thypothetical protein, conserved\tLmjF24.2200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2200\tLmjF.24.2200\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6040\tC\thypothetical protein, conserved\tLmjF24.2200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2200\tLmjF.24.2200\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6040\tC\thypothetical protein, conserved\tLmjF24.2200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2260\tLmjF.24.2260\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5990\tC\tnotchless homolog, putative\tLmjF24.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2280\tLmjF.24.2280\t\tGO:0003700\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5980\tF\tTFIIH basal transcription factor complex helicase subunit, putative\tLmjF24.2280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2280\tLmjF.24.2280\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5980\tC\tTFIIH basal transcription factor complex helicase subunit, putative\tLmjF24.2280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2290\tLmjF.24.2290\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5970\tC\tcullin-like protein-like protein\tLmjF24.2290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2310\tLmjF.24.2310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5960\tC\thypothetical protein, conserved\tLmjF24.2310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2310\tLmjF.24.2310\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.5960\tC\thypothetical protein, conserved\tLmjF24.2310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2320\tMKK4\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5950\tP\tmitogen-activated protein kinase kinase 4, putative\tLmjF24.2320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0080\tPABP3\t\tGO:0005515\tPMID:20675580\tIPI\tGeneDB:LmjF.35.4130\tF\tpoly(A)-binding protein 3\tLmjF25.0080\tmRNA\ttaxon:347515\t20101011\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0080\tPABP3\t\tGO:0005634\tPMID:20675580\tIDA\t\tC\tpoly(A)-binding protein 3\tLmjF25.0080\tmRNA\ttaxon:347515\t20101011\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0080\tPABP3\t\tGO:0005737\tPMID:20675580\tIDA\t\tC\tpoly(A)-binding protein 3\tLmjF25.0080\tmRNA\ttaxon:347515\t20101011\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0080\tPABP3\t\tGO:0008143\tPMID:20675580\tIDA\t\tF\tpoly(A)-binding protein 3\tLmjF25.0080\tmRNA\ttaxon:347515\t20101011\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0080\tPABP3\t\tGO:0031370\tPMID:20675580\tIDA\t\tF\tpoly(A)-binding protein 3\tLmjF25.0080\tmRNA\ttaxon:347515\t20101011\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0110\tLmjF.25.0110\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.170\tC\thypothetical protein, conserved\tLmjF25.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0110\tLmjF.25.0110\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.170\tC\thypothetical protein, conserved\tLmjF25.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0120\tLmjF.25.0120\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.180\tC\telectron transfer flavoprotein, putative\tLmjF25.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0120\tLmjF.25.0120\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.180\tC\telectron transfer flavoprotein, putative\tLmjF25.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0140\tLmjF.25.0140\t\tGO:0003677\tPMID:16730080\tISO\tGeneDB:Tb11.03.0935\tF\tDNA-directed RNA polymerase I subunit, putative\tLmjF25.0140\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0140\tLmjF.25.0140\t\tGO:0003899\tGO_REF:0000002\tISO\tGeneDB:Tb11.03.0935\tF\tDNA-directed RNA polymerase I subunit, putative\tLmjF25.0140\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0140\tLmjF.25.0140\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.200\tC\tDNA-directed RNA polymerase I subunit, putative\tLmjF25.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0140\tLmjF.25.0140\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.200\tC\tDNA-directed RNA polymerase I subunit, putative\tLmjF25.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0140\tLmjF.25.0140\t\tGO:0006351\tPMID:16730080\tISO\tGeneDB:Tb11.03.0935\tP\tDNA-directed RNA polymerase I subunit, putative\tLmjF25.0140\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0150\tLmjF.25.0150\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.210\tC\thypothetical protein, conserved\tLmjF25.0150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0150\tLmjF.25.0150\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.210\tC\thypothetical protein, conserved\tLmjF25.0150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0150\tLmjF.25.0150\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.210\tC\thypothetical protein, conserved\tLmjF25.0150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0160\tLmjF.25.0160\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.220\tC\thypothetical protein, conserved\tLmjF25.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0160\tLmjF.25.0160\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.220\tP\thypothetical protein, conserved\tLmjF25.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0160\tLmjF.25.0160\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.220\tC\thypothetical protein, conserved\tLmjF25.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0170\tLmjF.25.0170\t\tGO:0000365\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.230\tP\tcleavage and polyadenylation specificity factor, putative\tLmjF25.0170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0170\tLmjF.25.0170\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.230\tC\tcleavage and polyadenylation specificity factor, putative\tLmjF25.0170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0170\tLmjF.25.0170\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.230\tC\tcleavage and polyadenylation specificity factor, putative\tLmjF25.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0170\tLmjF.25.0170\t\tGO:0006378\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.230\tP\tcleavage and polyadenylation specificity factor, putative\tLmjF25.0170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0180\tLmjF.25.0180\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.240\tC\thypothetical protein, conserved\tLmjF25.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0180\tLmjF.25.0180\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.240\tC\thypothetical protein, conserved\tLmjF25.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0190\tLmjF.25.0190\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.250\tC\tubiquitin carboxyl-terminal hydrolase, putative\tLmjF25.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0190\tLmjF.25.0190\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.250\tC\tubiquitin carboxyl-terminal hydrolase, putative\tLmjF25.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0190\tLmjF.25.0190\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.250\tC\tubiquitin carboxyl-terminal hydrolase, putative\tLmjF25.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0200\tPIFTF6\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.260\tC\twd repeat-containing protein 19\tLmjF25.0200|IFT144\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0200\tPIFTF6\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.260\tC\twd repeat-containing protein 19\tLmjF25.0200|IFT144\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0200\tPIFTF6\t\tGO:0035721\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.260\tP\twd repeat-containing protein 19\tLmjF25.0200|IFT144\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0200\tPIFTF6\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.260\tP\twd repeat-containing protein 19\tLmjF25.0200|IFT144\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0210\tLmjF.25.0210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.270\tC\tmitochondrial carrier protein, putative\tLmjF25.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0210\tLmjF.25.0210\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.270\tC\tmitochondrial carrier protein, putative\tLmjF25.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0220\tLmjF.25.0220\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.280\tC\thypothetical protein, conserved\tLmjF25.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0230\tLmjF.25.0230\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.290\tC\tPhosphatase and tensin homolog, putative\tLmjF25.0230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0230\tLmjF.25.0230\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.290\tP\tPhosphatase and tensin homolog, putative\tLmjF25.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0230\tLmjF.25.0230\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.290\tP\tPhosphatase and tensin homolog, putative\tLmjF25.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0240\tLmjF.25.0240\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.300\tP\tpre-mRNA-splicing factor of RES complex, putative\tLmjF25.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0240\tLmjF.25.0240\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.300\tP\tpre-mRNA-splicing factor of RES complex, putative\tLmjF25.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0260\tLmjF.25.0260\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.320\tP\tDynein light chain 1, cytoplasmic, putative\tLmjF25.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0270\tNUP110\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.330\tC\tNucleoporin NUP110\tLmjF25.0270|MLP1\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0270\tNUP110\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.330\tC\tNucleoporin NUP110\tLmjF25.0270|MLP1\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0270\tNUP110\t\tGO:0044615\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.330\tC\tNucleoporin NUP110\tLmjF25.0270|MLP1\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0290\tRBP43\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.350\tC\tRNA-binding protein, putative\tLmjF25.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0290\tRBP43\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.350\tC\tRNA-binding protein, putative\tLmjF25.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0290\tRBP43\t\tGO:0016281\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.350\tC\tRNA-binding protein, putative\tLmjF25.0290\tmRNA\ttaxon:347515\t20140711\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0300\tLmjF.25.0300\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.360\tP\tMJ0570-related uncharacterized domain containing protein, putative\tLmjF25.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0310\tLmjF.25.0310\t\tGO:0000784\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.370\tC\thypothetical protein, conserved\tLmjF25.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0310\tLmjF.25.0310\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.370\tC\thypothetical protein, conserved\tLmjF25.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0310\tLmjF.25.0310\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.370\tC\thypothetical protein, conserved\tLmjF25.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0320\tb9d2\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.380\tC\tB9 domain-containing protein 2\tLmjF25.0320|mksr2\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0320\tb9d2\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.380\tC\tB9 domain-containing protein 2\tLmjF25.0320|mksr2\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0350\tLmjF.25.0350\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.400\tC\tProtein of unknown function (DUF1308), putative\tLmjF25.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0350\tLmjF.25.0350\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.400\tC\tProtein of unknown function (DUF1308), putative\tLmjF25.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0360\tLmjF.25.0360\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.410\tC\thypothetical protein, conserved\tLmjF25.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0370\tLmjF.25.0370\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.420\tC\tFcf2 pre-rRNA processing, putative\tLmjF25.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0370\tLmjF.25.0370\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.420\tC\tFcf2 pre-rRNA processing, putative\tLmjF25.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0420\tLmjF.25.0420\t\tGO:0097542\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.450\tC\thypothetical protein, conserved\tLmjF25.0420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0430\tLmjF.25.0430\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.460\tC\tWD domain, G-beta repeat/Utp13 specific WD40 associated domain containing protein, putative\tLmjF25.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0430\tLmjF.25.0430\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.460\tC\tWD domain, G-beta repeat/Utp13 specific WD40 associated domain containing protein, putative\tLmjF25.0430\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0440\tLmjF.25.0440\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.470\tC\ttranscription factor IIIb, putative\tLmjF25.0440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0440\tLmjF.25.0440\t\tGO:0042791\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.470\tP\ttranscription factor IIIb, putative\tLmjF25.0440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0440\tLmjF.25.0440\t\tGO:0042796\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.470\tP\ttranscription factor IIIb, putative\tLmjF25.0440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0440\tLmjF.25.0440\t\tGO:0042797\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.470\tP\ttranscription factor IIIb, putative\tLmjF25.0440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0450\tLmjF.25.0450\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.480\tC\t50S ribosome-binding GTPase, putative\tLmjF25.0450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0490\tUBP1\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.500\tF\tRNA-binding protein UBP1, putative\tLmjF25.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0490\tUBP1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.500\tC\tRNA-binding protein UBP1, putative\tLmjF25.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0490\tUBP1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.500\tC\tRNA-binding protein UBP1, putative\tLmjF25.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0490\tUBP1\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.500\tC\tRNA-binding protein UBP1, putative\tLmjF25.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0500\tUBP2\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.500\tF\tRNA-binding protein UBP2, putative\tLmjF25.0500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0500\tUBP2\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.500\tC\tRNA-binding protein UBP2, putative\tLmjF25.0500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0500\tUBP2\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.500\tC\tRNA-binding protein UBP2, putative\tLmjF25.0500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0500\tUBP2\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.500\tC\tRNA-binding protein UBP2, putative\tLmjF25.0500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0520\tLmjF.25.0520\t\tGO:0003723\tPMID:18840477|GO_REF:0000024\tISO\tGeneDB:Tb927.11.530|GeneDB:Tb11.03.0550\tF\tRNA-binding protein, putative\tLmjF25.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0520\tLmjF.25.0520\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.530\tC\tRNA-binding protein, putative\tLmjF25.0520\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0530\tABCT\t\tGO:0005524\tGO_REF:0000011\tISM\tPfam:PF00005\tF\tABC transporter, mitochondrial, putative\tLmjF25.0530\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0530\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tLmjF25.0530\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0530\tABCT\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.540\tC\tABC transporter, mitochondrial, putative\tLmjF25.0530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0530\tABCT\t\tGO:0042626\tGO_REF:0000024\tISS\tPfam:PF00005|UniProtKB:Q9JI39\tF\tABC transporter, mitochondrial, putative\tLmjF25.0530\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0530\tABCT\t\tGO:0043190\tGO_REF:0000024\tISS\tPfam:PF00005|UniProtKB:Q9JI39\tC\tABC transporter, mitochondrial, putative\tLmjF25.0530\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0540\tLmjF.25.0540\t\tGO:0000932\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.550\tC\thypothetical protein SCD6.10\tLmjF25.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0540\tLmjF.25.0540\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.550\tF\thypothetical protein SCD6.10\tLmjF25.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0540\tLmjF.25.0540\t\tGO:0005737\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.550\tC\thypothetical protein SCD6.10\tLmjF25.0540\tmRNA\ttaxon:347515\t20100922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0550\tLmjF.25.0550\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.560\tC\thypothetical protein, conserved\tLmjF25.0550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0550\tLmjF.25.0550\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.560\tC\thypothetical protein, conserved\tLmjF25.0550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0560\tLmjF.25.0560\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.570\tC\thypothetical protein, conserved\tLmjF25.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0590\tLmjF.25.0590\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.600\tC\thypothetical protein, conserved\tLmjF25.0590\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0590\tLmjF.25.0590\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.600\tC\thypothetical protein, conserved\tLmjF25.0590\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0590\tLmjF.25.0590\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.600\tC\thypothetical protein, conserved\tLmjF25.0590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0600\tLmjF.25.0600\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.610\tC\thypothetical protein, conserved\tLmjF25.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0600\tLmjF.25.0600\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.610\tC\thypothetical protein, conserved\tLmjF25.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0610\tRaptor\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.620\tC\tRegulatory-associated protein of TOR1\tLmjF25.0610|KOG1\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0610\tRaptor\t\tGO:0008361\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.620\tP\tRegulatory-associated protein of TOR1\tLmjF25.0610|KOG1\tmRNA\ttaxon:347515\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0610\tRaptor\t\tGO:1903432\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.620\tP\tRegulatory-associated protein of TOR1\tLmjF25.0610|KOG1\tmRNA\ttaxon:347515\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0620\tLmjF.25.0620\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.630\tC\tRNA polymerase I second largest subunit, putative\tLmjF25.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0620\tLmjF.25.0620\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.630\tC\tRNA polymerase I second largest subunit, putative\tLmjF25.0620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0620\tLmjF.25.0620\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.630\tC\tRNA polymerase I second largest subunit, putative\tLmjF25.0620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0630\tLmjF.25.0630\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.640\tC\thypothetical protein, conserved\tLmjF25.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0630\tLmjF.25.0630\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.640\tC\thypothetical protein, conserved\tLmjF25.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0630\tLmjF.25.0630\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.640\tC\thypothetical protein, conserved\tLmjF25.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0640\tLmjF.25.0640\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.650\tC\thypothetical protein, conserved\tLmjF25.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0650\tLmjF.25.0650\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.660\tC\tpredicted zinc finger protein\tLmjF25.0650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0670\tLmjF.25.0670\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.670\tC\tepsin, putative\tLmjF25.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0670\tLmjF.25.0670\t\tGO:0010008\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.670\tC\tepsin, putative\tLmjF25.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0670\tLmjF.25.0670\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.670\tC\tepsin, putative\tLmjF25.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0715\tLmjF.25.0715\t\tGO:0030863\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.720\tC\thypothetical protein, conserved\tLmjF25.0715\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0740\tLmjF.25.0740\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.750\tC\tDNA repair protein, putative\tLmjF25.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0740\tLmjF.25.0740\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.750\tC\tDNA repair protein, putative\tLmjF25.0740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0740\tLmjF.25.0740\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.750\tP\tDNA repair protein, putative\tLmjF25.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0740\tLmjF.25.0740\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.750\tP\tDNA repair protein, putative\tLmjF25.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0750\tPP2C\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.760\tC\tprotein phosphatase 2C, putative\tLmjF25.0750\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0820\tLmjF.25.0820\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.800\tC\tprefoldin subunit, putative\tLmjF25.0820\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0830\tLmjF.25.0830\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.810\tC\thypothetical protein, conserved\tLmjF25.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0830\tLmjF.25.0830\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.810\tP\thypothetical protein, conserved\tLmjF25.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0870\tLmjF.25.0870\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.850\tC\tAtypical serine/threonine protein kinase BUD32, putative\tLmjF25.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0870\tLmjF.25.0870\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.850\tC\tAtypical serine/threonine protein kinase BUD32, putative\tLmjF25.0870\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0880\tLmjF.25.0880\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.860\tP\tLeucine Rich Repeat, putative\tLmjF25.0880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0910\tCYPA\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.880\tC\tcyclophilin a, putative\tLmjF25.0910\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0910\tCYPA\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.880\tC\tcyclophilin a, putative\tLmjF25.0910\tmRNA\ttaxon:347515\t20141203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0910\tCYPA\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.880\tC\tcyclophilin a, putative\tLmjF25.0910\tmRNA\ttaxon:347515\t20141203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0910\tCYPA\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.880\tC\tcyclophilin a, putative\tLmjF25.0910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0910\tCYPA\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.880\tC\tcyclophilin a, putative\tLmjF25.0910\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0920\tLmjF.25.0920\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.870\tF\tHistone RNA hairpin-binding protein RNA-binding domain containing protein, putative\tLmjF25.0920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0930\tLmjF.25.0930\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.880\tC\tAnkyrin repeats (many copies), putative\tLmjF25.0930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0930\tLmjF.25.0930\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.880\tC\tAnkyrin repeats (many copies), putative\tLmjF25.0930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0930\tLmjF.25.0930\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.880\tC\tAnkyrin repeats (many copies), putative\tLmjF25.0930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0930\tLmjF.25.0930\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.880\tC\tAnkyrin repeats (many copies), 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}, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0960\tTUBG\t\tGO:0005815\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.910\tC\ttubulin gamma chain\tLmjF25.0960\tmRNA\ttaxon:347515\t20141210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0960\tTUBG\t\tGO:0007020\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.910\tP\ttubulin gamma chain\tLmjF25.0960\tmRNA\ttaxon:347515\t20141210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0960\tTUBG\t\tGO:0016049\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.910\tP\ttubulin gamma chain\tLmjF25.0960\tmRNA\ttaxon:347515\t20141210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0960\tTUBG\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.910\tC\ttubulin gamma chain\tLmjF25.0960\tmRNA\ttaxon:347515\t20141210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0980\tLmjF.25.0980\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.930\tC\tdynein heavy chain, putative\tLmjF25.0980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0980\tLmjF.25.0980\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.930\tC\tdynein heavy chain, putative\tLmjF25.0980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0990\tLmjF.25.0990\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.940\tC\thypothetical protein, conserved\tLmjF25.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0990\tLmjF.25.0990\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.940\tC\thypothetical protein, conserved\tLmjF25.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0990\tLmjF.25.0990\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.940\tC\thypothetical protein, conserved\tLmjF25.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0990\tLmjF.25.0990\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.940\tC\thypothetical protein, conserved\tLmjF25.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1010\tLmjF.25.1010\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.950\tC\t2OG-Fe(II) oxygenase superfamily, putative\tLmjF25.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1020\tLmjF.25.1020\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.970\tC\tdehydrogenase-like protein\tLmjF25.1020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1030\tLmjF.25.1030\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.980\tC\thypothetical protein, conserved\tLmjF25.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1030\tLmjF.25.1030\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.980\tC\thypothetical protein, conserved\tLmjF25.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1050\tLmjF.25.1050\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1000\tC\tfrataxin-like protein\tLmjF25.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1090\tMGT2\t\tGO:0005783\tPMID:19136005\tEXP\t\tC\tmagnesium transporter protein 2\tLmjF25.1090\tmRNA\ttaxon:347515\t20090721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1090\tMGT2\t\tGO:0006812\tPMID:19136005\tISM\t\tP\tmagnesium transporter protein 2\tLmjF25.1090\tmRNA\ttaxon:347515\t20090721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1090\tMGT2\t\tGO:0015095\tPMID:19136005\tEXP\t\tF\tmagnesium transporter protein 2\tLmjF25.1090\tmRNA\ttaxon:347515\t20090721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1090\tMGT2\t\tGO:0046583\tPMID:19136005\tISM\t\tF\tmagnesium transporter protein 2\tLmjF25.1090\tmRNA\ttaxon:347515\t20090721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1120\tALDH2\t\tGO:0004029\tPMID:7630384|PMID:19497128\tISO\tGeneDB:LtaP25.1180\tF\taldehyde dehydrogenase, mitochondrial precursor\tLmjF25.1120\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1120\tALDH2\t\tGO:0046164\tPMID:7630384|PMID:19497128\tISO\tGeneDB:LtaP25.1180\tP\taldehyde dehydrogenase, mitochondrial precursor\tLmjF25.1120\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1130\tCOXVII\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1410\tC\tcytochrome oxidase subunit VII\tLmjF25.1130\tmRNA\ttaxon:347515\t20151001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF25.1150\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1150\tLmjF.25.1150\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1400\tC\talpha-tubulin N-acetyltransferase, putative\tLmjF25.1150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1150\tLmjF.25.1150\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1400\tC\talpha-tubulin N-acetyltransferase, putative\tLmjF25.1150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1160\tLmjF.25.1160\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1390\tC\tLMBR1-like membrane protein, putative\tLmjF25.1160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1160\tLmjF.25.1160\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1390\tC\tLMBR1-like membrane protein, putative\tLmjF25.1160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1170\tATPB\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1170\tmRNA\ttaxon:347515\t20141208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1170\tATPB\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tF\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1170\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1170\tATPB\t\tGO:0005525\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tF\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1170\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1170\tATPB\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1170\tATPB\t\tGO:0005743\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1170\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1170\tATPB\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1180\tATPB\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1180\tmRNA\ttaxon:347515\t20141208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1180\tATPB\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tF\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1180\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1180\tATPB\t\tGO:0005525\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tF\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1180\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1180\tATPB\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1180\tATPB\t\tGO:0005743\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1180\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1180\tATPB\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1190\tLmjF.25.1190\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1370\tC\tribosomal protein S25\tLmjF25.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1200\tLmjF.25.1200\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1360\tC\tmodification methylase-like protein\tLmjF25.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1210\tLmjF.25.1210\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1350\tC\thypothetical protein, conserved\tLmjF25.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1210\tLmjF.25.1210\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1350\tC\thypothetical protein, conserved\tLmjF25.1210\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1220\tLmjF.25.1220\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF25.1220\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1220\tLmjF.25.1220\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1340\tC\thypothetical protein, conserved\tLmjF25.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1220\tLmjF.25.1220\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1340\tC\thypothetical protein, conserved\tLmjF25.1220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1220\tLmjF.25.1220\t\tGO:0005846\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1340\tC\thypothetical protein, conserved\tLmjF25.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1230\tLmjF.25.1230\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1330\tC\thypothetical protein, conserved\tLmjF25.1230\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1250\tLmjF.25.1250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1320\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1280\tLmjF.25.1280\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1290\tC\tCullin family/Cullin protein neddylation domain containing protein, putative\tLmjF25.1280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1280\tLmjF.25.1280\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1290\tC\tCullin family/Cullin protein neddylation domain containing protein, putative\tLmjF25.1280\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1280\tLmjF.25.1280\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1290\tC\tCullin family/Cullin protein neddylation domain containing protein, putative\tLmjF25.1280\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1300\tLmjF.25.1300\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1270\tC\tPRP38 family, putative\tLmjF25.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1300\tLmjF.25.1300\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1270\tC\tPRP38 family, putative\tLmjF25.1300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1310\tLmjF.25.1310\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1260\tC\thypothetical protein, conserved\tLmjF25.1310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1315\tRPB10\t\tGO:0000120\tPMID:16730080\tISO\tGeneDB:Tb927.3.1250\tC\tDNA-directed RNA polymerase I subunit RPB10, putative\tLmjF25.1315\tmRNA\ttaxon:347515\t20141208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1315\tRPB10\t\tGO:0003677\tPMID:16730080|GO_REF:0000024\tISO\tGeneDB:Tb927.3.1250\tF\tDNA-directed RNA polymerase I subunit RPB10, putative\tLmjF25.1315\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1315\tRPB10\t\tGO:0006351\tGO_REF:0000002\tISM\tInterPro:IPR000268\tP\tDNA-directed RNA polymerase I subunit RPB10, putative\tLmjF25.1315\tmRNA\ttaxon:347515\t20151001\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1320\tLmjF.25.1320\t\tGO:0004722\tGO_REF:0000011\tISM\tPfam:PF00149\tF\tSerine/threonine-protein phosphatase 2A, putative\tLmjF25.1320\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1320\tLmjF.25.1320\t\tGO:0006470\tGO_REF:0000011\tISM\tPfam:PF00149\tP\tSerine/threonine-protein phosphatase 2A, putative\tLmjF25.1320\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1320\tLmjF.25.1320\t\tGO:0016787\tGO_REF:0000011\tISM\tInterPro:IPR006186\tF\tSerine/threonine-protein phosphatase 2A, putative\tLmjF25.1320\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1340\tLmjF.25.1340\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1210\tC\tprotein transport protein Sec24C, putative\tLmjF25.1340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1340\tLmjF.25.1340\t\tGO:0006888\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1210\tP\tprotein transport protein Sec24C, putative\tLmjF25.1340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1340\tLmjF.25.1340\t\tGO:0030127\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1210\tC\tprotein transport protein Sec24C, putative\tLmjF25.1340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1350\tLmjF.25.1350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1190\tC\thypothetical protein, conserved\tLmjF25.1350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1350\tLmjF.25.1350\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1190\tC\thypothetical protein, conserved\tLmjF25.1350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1350\tLmjF.25.1350\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1190\tC\thypothetical protein, conserved\tLmjF25.1350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1360\tLmjF.25.1360\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1180\tC\thypothetical protein, conserved\tLmjF25.1360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1370\tLmjF.25.1370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1170\tC\tTAP42-like family, putative\tLmjF25.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1370\tLmjF.25.1370\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1170\tC\tTAP42-like family, putative\tLmjF25.1370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1380\tLmjF.25.1380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1160\tC\thypothetical protein, conserved\tLmjF25.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1390\tLmjF.25.1390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1150\tC\tConserved hypothetical ATP binding protein, putative\tLmjF25.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1400\tLmjF.25.1400\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1140\tC\tSurp module, putative\tLmjF25.1400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1400\tLmjF.25.1400\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1140\tC\tSurp module, putative\tLmjF25.1400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1420\tLmjF.25.1420\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1120\tC\tGTP-binding protein, putative\tLmjF25.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1420\tLmjF.25.1420\t\tGO:0005643\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1120\tC\tGTP-binding protein, putative\tLmjF25.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1430\tPIFTA1\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1110\tC\tPutative intraflagellar transport protein A1\tLmjF25.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1430\tPIFTA1\t\tGO:0035720\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1110\tP\tPutative intraflagellar transport protein A1\tLmjF25.1430\tmRNA\ttaxon:347515\t20150310\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1430\tPIFTA1\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1110\tP\tPutative intraflagellar transport protein A1\tLmjF25.1430\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1440\tLmjF.25.1440\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1100\tC\thypothetical protein, conserved\tLmjF25.1440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1443\tU1-24K\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1090\tC\tU1 snRNP-specific protein\tLmjF25.1443|snRNP-U1-24K\tmRNA\ttaxon:347515\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1443\tU1-24K\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1090\tC\tU1 snRNP-specific protein\tLmjF25.1443|snRNP-U1-24K\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1443\tU1-24K\t\tGO:0005685\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1090\tC\tU1 snRNP-specific protein\tLmjF25.1443|snRNP-U1-24K\tmRNA\ttaxon:347515\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1443\tU1-24K\t\tGO:0045292\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1090\tP\tU1 snRNP-specific protein\tLmjF25.1443|snRNP-U1-24K\tmRNA\ttaxon:347515\t20160816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1445\tPOMP23\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1080\tC\tPresent in the outer mitochondrial membrane proteome 23\tLmjF25.1445\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1445\tPOMP23\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1080\tC\tPresent in the outer mitochondrial membrane proteome 23\tLmjF25.1445\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1445\tPOMP23\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1080\tP\tPresent in the outer mitochondrial membrane proteome 23\tLmjF25.1445\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1450\tRF1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1070\tC\tPeptide chain release factor 1, mitochondrial, putative\tLmjF25.1450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1450\tRF1\t\tGO:0005739\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.1070\tC\tPeptide chain release factor 1, mitochondrial, putative\tLmjF25.1450\tmRNA\ttaxon:347515\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1450\tRF1\t\tGO:0006119\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.1070\tP\tPeptide chain release factor 1, mitochondrial, putative\tLmjF25.1450\tmRNA\ttaxon:347515\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1460\tCARP4\t\tGO:0042493\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.1060\tP\tcAMP response protein, putative\tLmjF25.1460\tmRNA\ttaxon:347515\t20130829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1470\tCYCA\t\tGO:0019900\tPMID:20338198\tIDA\t\tF\tcyclin\tLmjF25.1470\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1530\tLmjF.25.1530\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1580\tC\thypothetical protein, conserved\tLmjF25.1530\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1540\tLmjF.25.1540\t\tGO:0003723\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.3.1590\tF\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF25.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1540\tLmjF.25.1540\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1590\tF\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF25.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1540\tLmjF.25.1540\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1590\tC\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF25.1540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1540\tLmjF.25.1540\t\tGO:0016554\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.3.1590\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF25.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1540\tLmjF.25.1540\t\tGO:0048255\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.3.1590\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF25.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1550\tLmjF.25.1550\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1600\tC\thypothetical protein, conserved\tLmjF25.1550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1550\tLmjF.25.1550\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1600\tC\thypothetical protein, conserved\tLmjF25.1550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1550\tLmjF.25.1550\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1600\tC\thypothetical protein, conserved\tLmjF25.1550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1610\tEIF3F\t\tGO:0005737\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\tEukaryotic translation initiation factor 3 subunit F\tLmjF25.1610\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1610\tEIF3F\t\tGO:0005852\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\tEukaryotic translation initiation factor 3 subunit F\tLmjF25.1610\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1620\tLmjF.25.1620\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1690\tC\thypothetical protein, conserved\tLmjF25.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1630\tLmjF.25.1630\t\tGO:0004144\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1700\tF\tdiacylglycerol acyltransferase, putative\tLmjF25.1630\tmRNA\ttaxon:347515\t20151016\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1630\tLmjF.25.1630\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1700\tC\tdiacylglycerol acyltransferase, putative\tLmjF25.1630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1630\tLmjF.25.1630\t\tGO:0046467\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1700\tP\tdiacylglycerol acyltransferase, putative\tLmjF25.1630\tmRNA\ttaxon:347515\t20151016\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1630\tLmjF.25.1630\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1700\tC\tdiacylglycerol acyltransferase, putative\tLmjF25.1630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1640\tLmjF.25.1640\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1710\tC\thypothetical protein, conserved\tLmjF25.1640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1670\tmad2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1750\tC\tMad2-like HORMA domain containing protein\tLmjF25.1670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1670\tmad2\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1750\tC\tMad2-like HORMA domain containing protein\tLmjF25.1670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1670\tmad2\t\tGO:0036064\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.1750\tC\tMad2-like HORMA domain containing protein\tLmjF25.1670\tmRNA\ttaxon:347515\t20140221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1690\tJ36\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1760\tC\tchaperone protein DnaJ, putative\tLmjF25.1690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1705\tLmjF.25.1705\t\tGO:0000244\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1780\tP\tLSM domain containing protein, putative\tLmjF25.1705\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1705\tLmjF.25.1705\t\tGO:0000365\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1780\tP\tLSM domain containing protein, putative\tLmjF25.1705\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1705\tLmjF.25.1705\t\tGO:0000398\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1780\tP\tLSM domain containing protein, putative\tLmjF25.1705\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1705\tLmjF.25.1705\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1780\tC\tLSM domain containing protein, putative\tLmjF25.1705\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1705\tLmjF.25.1705\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1780\tP\tLSM domain containing protein, putative\tLmjF25.1705\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1705\tLmjF.25.1705\t\tGO:0030629\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1780\tF\tLSM domain containing protein, 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1740\tLmjF.25.1740\t\tGO:0003723\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.3.1820\tF\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF25.1740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1740\tLmjF.25.1740\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1820\tC\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF25.1740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1760\tLmjF.25.1760\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1830\tC\thypothetical protein, conserved\tLmjF25.1760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1770\tEnCR\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1840\tC\tenoyl-CoA reductase, putative\tLmjF25.1770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1770\tEnCR\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1840\tC\tenoyl-CoA reductase, 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Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1780\tLmjF.25.1780\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1860\tC\tATP-grasp domain containing protein, putative\tLmjF25.1780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1780\tLmjF.25.1780\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1860\tC\tATP-grasp domain containing protein, putative\tLmjF25.1780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1820\tLmjF.25.1820\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1900\tC\thypothetical protein, conserved\tLmjF25.1820\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1830\tLmjF.25.1830\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1910\tF\tHistone RNA hairpin-binding protein RNA-binding domain containing protein, putative\tLmjF25.1830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1850\tLmjF.25.1850\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1930\tC\thypothetical protein, conserved\tLmjF25.1850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1850\tLmjF.25.1850\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1930\tC\thypothetical protein, conserved\tLmjF25.1850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1860\tLmjF.25.1860\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1940\tC\tTLP18.3, Psb32 and MOLO-1 founding proteins of phosphatase, putative\tLmjF25.1860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1900\tPPCS\t\tGO:0004632\tGO_REF:0000012\tISA\tUniProtKB:PPCS_HUMAN\tF\tphosphopantothenate--cysteine ligase, putative\tLmjF25.1900\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1900\tPPCS\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1970\tC\tphosphopantothenate--cysteine ligase, putative\tLmjF25.1900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1900\tPPCS\t\tGO:0015937\tGO_REF:0000012\tISA\tUniProtKB:PPCS_YEAST|UniProtKB:PPCS_HUMAN\tP\tphosphopantothenate--cysteine ligase, putative\tLmjF25.1900\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1900\tPPCS\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1970\tC\tphosphopantothenate--cysteine ligase, putative\tLmjF25.1900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1900\tPPCS\t\tGO:0070062\tGO_REF:0000012\tISA\tUniProtKB:PPCS_HUMAN\tC\tphosphopantothenate--cysteine ligase, putative\tLmjF25.1900\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1900\tPPCS\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1970\tC\tphosphopantothenate--cysteine ligase, putative\tLmjF25.1900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1910\tLmjF.25.1910\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.1980\tC\thypothetical protein, conserved\tLmjF25.1910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1920\tLmjF.25.1920\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1990\tC\thypothetical protein, conserved\tLmjF25.1920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1930\tLmjF.25.1930\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2000\tC\thypothetical protein, conserved\tLmjF25.1930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1930\tLmjF.25.1930\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2000\tC\thypothetical protein, conserved\tLmjF25.1930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1950\tKIN-F\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2020\tC\tkinesin, putative\tLmjF25.1950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1950\tKIN-F\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2020\tC\tkinesin, putative\tLmjF25.1950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1950\tKIN-F\t\tGO:0005819\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2020\tC\tkinesin, putative\tLmjF25.1950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1960\tLmjF.25.1960\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2030\tC\tacylphosphatase, putative\tLmjF25.1960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1960\tLmjF.25.1960\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2030\tC\tacylphosphatase, putative\tLmjF25.1960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1960\tLmjF.25.1960\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2030\tC\tacylphosphatase, putative\tLmjF25.1960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1980\tLmjF.25.1980\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2050\tP\thypothetical protein, conserved\tLmjF25.1980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1980\tLmjF.25.1980\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2050\tC\thypothetical protein, conserved\tLmjF25.1980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2000\tLmjF.25.2000\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2070\tC\thypothetical protein, conserved\tLmjF25.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2000\tLmjF.25.2000\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2070\tC\thypothetical protein, conserved\tLmjF25.2000\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2010\tLmjF.25.2010\t\tGO:0005739\tPMID:18364711\tRCA\t\tC\t2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, putative\tLmjF25.2010\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2030\tTim50\t\tGO:0004721\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2110\tF\tdullard-like phosphatase domain containing protein, putative\tLmjF25.2030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2030\tTim50\t\tGO:0030150\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2110\tP\tdullard-like phosphatase domain containing protein, putative\tLmjF25.2030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2030\tTim50\t\tGO:0031966\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2110\tC\tdullard-like phosphatase domain containing protein, putative\tLmjF25.2030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2030\tTim50\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2110\tC\tdullard-like phosphatase domain containing protein, putative\tLmjF25.2030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2040\tLmjF.25.2040\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2120\tC\thypothetical protein, conserved\tLmjF25.2040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2060\tLmjF.25.2060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2150\tC\tStage II sporulation protein E (SpoIIE), putative\tLmjF25.2060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2070\tLmjF.25.2070\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2160\tC\tRieske [2Fe-2S] domain containing protein, putative\tLmjF25.2070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2070\tLmjF.25.2070\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2160\tC\tRieske [2Fe-2S] domain containing protein, putative\tLmjF25.2070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2080\tLmjF.25.2080\t\tGO:0003924\tGO_REF:0000012\tISA\tUniProtKB:ETUD1_HUMAN\tF\telongation factor 2-like protein\tLmjF25.2080\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2080\tLmjF.25.2080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2170\tC\telongation factor 2-like protein\tLmjF25.2080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2080\tLmjF.25.2080\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2170\tC\telongation factor 2-like protein\tLmjF25.2080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2080\tLmjF.25.2080\t\tGO:0042256\tGO_REF:0000012\tISA\tUniProtKB:ETUD1_HUMAN\tP\telongation factor 2-like protein\tLmjF25.2080\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2080\tLmjF.25.2080\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2170\tC\telongation factor 2-like protein\tLmjF25.2080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2090\tLmjF.25.2090\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2180\tC\thypothetical protein, conserved\tLmjF25.2090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2090\tLmjF.25.2090\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2180\tC\thypothetical protein, conserved\tLmjF25.2090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2095\tCET1\t\tGO:0003924\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2190\tF\tCapping enzyme RNA triphosphatase 1\tLmjF25.2095\tmRNA\ttaxon:347515\t20160721\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2095\tCET1\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2190\tC\tCapping enzyme RNA triphosphatase 1\tLmjF25.2095\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2095\tCET1\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2190\tC\tCapping enzyme RNA triphosphatase 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2120\tEIF3J\t\tGO:0005852\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\teukaryotic translation initiation factor 3 subunit j\tLmjF25.2120\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2130\tLmjF.25.2130\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2230\tC\tsuccinyl-CoA synthetase alpha subunit, putative\tLmjF25.2130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2140\tLmjF.25.2140\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2230\tC\tsuccinyl-CoA synthetase alpha subunit, putative\tLmjF25.2140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2160\tLmjF.25.2160\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2260\tC\thypothetical protein, conserved\tLmjF25.2160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2170\tLmjF.25.2170\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2270\tC\thypothetical protein, 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2200\tLmjF.25.2200\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2310\tC\tparkin co-regulated protein, putative\tLmjF25.2200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2200\tLmjF.25.2200\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2310\tP\tparkin co-regulated protein, putative\tLmjF25.2200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2220\tLmjF.25.2220\t\tGO:0005643\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2330\tC\thypothetical protein, conserved\tLmjF25.2220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2220\tLmjF.25.2220\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2330\tP\thypothetical protein, conserved\tLmjF25.2220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2230\tPEX2\t\tGO:0017038\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2340\tP\tglycosome import protein, putative\tLmjF25.2230|GIM1\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2235\tLmjF.25.2235\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2350\tC\thypothetical protein, conserved\tLmjF25.2235\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2280\tLmjF.25.2280\t\tGO:0006897\tPMID:19240115\tISO\tGeneDB:Tb927.3.2400\tP\tpalmitoyl acyltransferase 10, putative\tLmjF25.2280\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2280\tLmjF.25.2280\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 10, putative\tLmjF25.2280\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2280\tLmjF.25.2280\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb927.3.2400\tP\tpalmitoyl acyltransferase 10, putative\tLmjF25.2280\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2290\tLmjF.25.2290\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2410\tC\tPex2 / Pex12 amino terminal region/Ring finger domain containing protein, putative\tLmjF25.2290\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2290\tLmjF.25.2290\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2410\tC\tPex2 / Pex12 amino terminal region/Ring finger domain containing protein, putative\tLmjF25.2290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2320\tLmjF.25.2320\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2420\tC\tMicrosomal signal peptidase 12 kDa subunit (SPC12), putative\tLmjF25.2320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2330\tLmjF.25.2330\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2430\tC\tVacuolar sorting protein 9 (VPS9) domain containing protein, putative\tLmjF25.2330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2340\tAEK1\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2440\tP\tAGC essential kinase 1\tLmjF25.2340\tmRNA\ttaxon:347515\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2340\tAEK1\t\tGO:0004674\tGO_REF:0000011\tISO\tInterPro:IPR008271\tF\tAGC essential kinase 1\tLmjF25.2340\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2340\tAEK1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2440\tC\tAGC essential kinase 1\tLmjF25.2340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2340\tAEK1\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2440\tC\tAGC essential kinase 1\tLmjF25.2340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2340\tAEK1\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2440\tC\tAGC essential kinase 1\tLmjF25.2340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2360\tPUF8\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2470\tC\tPumilio homology domain family member 8\tLmjF25.2360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2400\tLmjF.25.2400\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2480\tC\tArv1-like family, putative\tLmjF25.2400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0005\tLmjF.26.0005\t\tGO:0000290\tPMID:10801455\tIDA\t\tP\tLsm7p protein, putative\tLmjF26.0005\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0005\tLmjF.26.0005\t\tGO:0000932\tPMID:10801455\tIDA\t\tC\tLsm7p protein, putative\tLmjF26.0005\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0005\tLmjF.26.0005\t\tGO:0008380\tPMID:10801455\tIDA\t\tP\tLsm7p protein, putative\tLmjF26.0005\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0005\tLmjF.26.0005\t\tGO:0008380\tGO_REF:0000002\tIDA\t\tP\tLsm7p protein, putative\tLmjF26.0005\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0005\tLmjF.26.0005\t\tGO:0016070\tPMID:10747033\tIDA\t\tP\tLsm7p protein, putative\tLmjF26.0005\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0030\tGCVP\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1910\tC\tpyridoxal phosphate containing glycine decarboxylase, 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0140\tAPRT\t\tGO:0004422\tPMID:20363738\tISO\tGeneDB:LinJ.26.0120\tF\tadenine phosphoribosyltransferase\tAPRTase|LmjF26.0140\tmRNA\ttaxon:347515\t20100415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0140\tAPRT\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1780\tC\tadenine phosphoribosyltransferase\tAPRTase|LmjF26.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0140\tAPRT\t\tGO:0005829\tPMID:14747142|PMID:19497128\tEXP\t\tC\tadenine phosphoribosyltransferase\tAPRTase|LmjF26.0140\tmRNA\ttaxon:347515\t20090728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0140\tAPRT\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1780\tC\tadenine phosphoribosyltransferase\tAPRTase|LmjF26.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0140\tAPRT\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1780\tC\tadenine phosphoribosyltransferase\tAPRTase|LmjF26.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0140\tAPRT\t\tGO:0043101\tPMID:20363738\tISO\tGeneDB:LinJ.26.0120\tP\tadenine phosphoribosyltransferase\tAPRTase|LmjF26.0140\tmRNA\ttaxon:347515\t20100415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0140\tAPRT\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1780\tC\tadenine phosphoribosyltransferase\tAPRTase|LmjF26.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0170\tLmjF.26.0170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1730\tC\t60S ribosomal protein L7, putative\tLmjF26.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0180\tLmjF.26.0180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1730\tC\t60S ribosomal protein L7, putative\tLmjF26.0180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0190\tLmjF.26.0190\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1720\tC\tScaffold protein Nfu/NifU N terminal/NifU-like domain containing protein, putative\tLmjF26.0190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0200\tLmjF.26.0200\t\tGO:0000294\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.1710\tP\teukaryotic peptide chain release factor subunit 1, putative\tLmjF26.0200\tmRNA\ttaxon:347515\t20120725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0200\tLmjF.26.0200\t\tGO:0004521\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.1710\tF\teukaryotic peptide chain release factor subunit 1, putative\tLmjF26.0200\tmRNA\ttaxon:347515\t20120725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0200\tLmjF.26.0200\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1710\tC\teukaryotic peptide chain release factor subunit 1, putative\tLmjF26.0200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0200\tLmjF.26.0200\t\tGO:0006417\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.1710\tP\teukaryotic peptide chain release factor subunit 1, putative\tLmjF26.0200\tmRNA\ttaxon:347515\t20120725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0200\tLmjF.26.0200\t\tGO:0007067\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.1710\tP\teukaryotic peptide chain release factor subunit 1, putative\tLmjF26.0200\tmRNA\ttaxon:347515\t20120725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0200\tLmjF.26.0200\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1710\tP\teukaryotic peptide chain release factor subunit 1, putative\tLmjF26.0200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0200\tLmjF.26.0200\t\tGO:0032790\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.1710\tP\teukaryotic peptide chain release factor subunit 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qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0210\tSIR2RP1\t\tGO:0003950\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1690\tF\tSilent information regulator 2 related protein 1\tSIR2|LmjF26.0210\tmRNA\ttaxon:347515\t20091126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0210\tSIR2RP1\t\tGO:0003956\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1690\tF\tSilent information regulator 2 related protein 1\tSIR2|LmjF26.0210\tmRNA\ttaxon:347515\t20091126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0210\tSIR2RP1\t\tGO:0017136\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1690\tF\tSilent information regulator 2 related protein 1\tSIR2|LmjF26.0210\tmRNA\ttaxon:347515\t20091126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0210\tSIR2RP1\t\tGO:0034979\tGO_REF:0000024\tISO\tGeneDB:LinJ.26.0200\tF\tSilent information regulator 2 related protein 1\tSIR2|LmjF26.0210\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"TriTrypDB\tLmjF.26.0240\teif4e6\t\tGO:0016281\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.1670\tC\tEukaryotic translation initiation factor 4E type 6, putative\tLmjF26.0240\tmRNA\ttaxon:347515\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0240\teif4e6\t\tGO:0044458\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.1670\tP\tEukaryotic translation initiation factor 4E type 6, putative\tLmjF26.0240\tmRNA\ttaxon:347515\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0240\teif4e6\t\tGO:0048870\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.1670\tP\tEukaryotic translation initiation factor 4E type 6, putative\tLmjF26.0240\tmRNA\ttaxon:347515\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0260\tLmjF.26.0260\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1650\tC\thypothetical protein, conserved\tLmjF26.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0270\tLmjF.26.0270\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1640\tC\tras-like small GTPases, putative\tLmjF26.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0270\tLmjF.26.0270\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1640\tC\tras-like small GTPases, putative\tLmjF26.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0270\tLmjF.26.0270\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1640\tC\tras-like small GTPases, putative\tLmjF26.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0280\tLmjF.26.0280\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1630\tC\thypothetical protein, conserved\tLmjF26.0280\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0280\tLmjF.26.0280\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1630\tC\thypothetical protein, conserved\tLmjF26.0280\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0280\tLmjF.26.0280\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1630\tC\thypothetical protein, conserved\tLmjF26.0280\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0290\tLmjF.26.0290\t\tGO:0006378\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1620\tP\tnucleotide hydrolase, putative\tLmjF26.0290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0310\tLmjF.26.0310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1610\tC\t6-phosphofructo-2-kinase/fructose-2,6-biphosphatase-1-like protein\tLmjF26.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0320\tDHCH1\t\tGO:0004487\tPMID:19183277\tIDA\t\tF\tC-1-tetrahydrofolate synthase, cytoplasmic, putative\tLmjF26.0320\tmRNA\ttaxon:347515\t20090611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0320\tDHCH1\t\tGO:0005829\tPMID:19450731\tIDA\t\tC\tC-1-tetrahydrofolate synthase, cytoplasmic, putative\tLmjF26.0320\tmRNA\ttaxon:347515\t20170815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0320\tDHCH1\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1600\tC\tC-1-tetrahydrofolate synthase, cytoplasmic, putative\tLmjF26.0320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0330\tCYC8\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1590\tC\tmitotic cyclin, putative\tLmjF26.0330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0370\tLmjF.26.0370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1560\tC\tTPR repeat, putative\tLmjF26.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0370\tLmjF.26.0370\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1560\tC\tTPR repeat, putative\tLmjF26.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0370\tLmjF.26.0370\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1560\tC\tTPR repeat, putative\tLmjF26.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0390\tRET2\t\tGO:0031019\tPMID:20138580\tIDA\t\tC\tRET2, RNA editing complex MP57\tLmjF26.0390\tmRNA\ttaxon:347515\t20100416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0390\tRET2\t\tGO:0050265\tPMID:20138580\tIMP\t\tF\tRET2, RNA editing complex MP57\tLmjF26.0390\tmRNA\ttaxon:347515\t20100416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0400\tLmjF.26.0400\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1530\tC\t2OG-Fe(II) oxygenase superfamily, putative\tLmjF26.0400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0400\tLmjF.26.0400\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1530\tC\t2OG-Fe(II) oxygenase superfamily, putative\tLmjF26.0400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0430\tLmjF.26.0430\t\tGO:0000166\tPMID:19875444|GO_REF:0000024\tISO\tGeneDB:Tb927.7.1500\tF\tnucleotide binding protein-like protein\tLmjF26.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0430\tLmjF.26.0430\t\tGO:0002101\tPMID:19875444\tEXP\t\tP\tnucleotide binding protein-like protein\tLmjF26.0430\tmRNA\ttaxon:347515\t20100609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0430\tLmjF.26.0430\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1500\tC\tnucleotide binding protein-like protein\tLmjF26.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0430\tLmjF.26.0430\t\tGO:0005829\tPMID:19875444|GO_REF:0000024\tISO\tGeneDB:Tb927.7.1500\tC\tnucleotide binding protein-like protein\tLmjF26.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0430\tLmjF.26.0430\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1500\tC\tnucleotide binding protein-like protein\tLmjF26.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0430\tLmjF.26.0430\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1500\tC\tnucleotide binding protein-like protein\tLmjF26.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0460\tLmjF.26.0460\t\tGO:0000276\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1470\tC\tATPase subunit 9, putative\tLmjF26.0460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0490\tLmjF.26.0490\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1440\tC\tDNA polymerase sigma-like protein\tLmjF26.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0560\tLmjF.26.0560\t\tGO:0032473\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1400\tC\thypothetical protein, conserved\tLmjF26.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0590\tLmjF.26.0590\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1370\tC\tspliced leader RNA PSE-promoter transcription factor, putative\tLmjF26.0590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0660\tLmjF.26.0660\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1300\tC\tprotein disulfide isomerase, putative\tLmjF26.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0660\tLmjF.26.0660\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1300\tC\tprotein disulfide isomerase, putative\tLmjF26.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0660\tLmjF.26.0660\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1300\tP\tprotein disulfide isomerase, putative\tLmjF26.0660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0680\tLmjF.26.0680\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1290\tP\tProtein of unknown function (DUF2012), putative\tLmjF26.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0750\tLmjF.26.0750\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1190\tC\tRegulator of chromosome condensation (RCC1) repeat, putative\tLmjF26.0750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0780\tLmjF.26.0780\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1170\tC\tRNA recognition motif (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF26.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0840\tLmjF.26.0840\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1100\tF\thypothetical protein, conserved\tLmjF26.0840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0870\tFYRP\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1060\tC\tISWI complex protein\tLmjF26.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0870\tFYRP\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1060\tC\tISWI complex protein\tLmjF26.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0870\tFYRP\t\tGO:0031010\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1060\tC\tISWI complex protein\tLmjF26.0870\tmRNA\ttaxon:347515\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0870\tFYRP\t\tGO:0044212\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1060\tF\tISWI complex 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0890\tLmjF.26.0890\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1040\tC\t40S ribosomal protein S16, putative\tLmjF26.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0890\tLmjF.26.0890\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1040\tC\t40S ribosomal protein S16, putative\tLmjF26.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0930\tLmjF.26.0930\t\tGO:0000002\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1000\tP\thypothetical protein, conserved\tLmjF26.0930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0930\tLmjF.26.0930\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1000\tC\thypothetical protein, conserved\tLmjF26.0930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0930\tLmjF.26.0930\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1000\tC\thypothetical protein, conserved\tLmjF26.0930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0940\tJ31\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.990\tC\tchaperone protein DnaJ, putative\tLmjF26.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0990\tLmjF.26.0990\t\tGO:0005764\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.950\tC\tPolycystin cation channel, putative\tLmjF26.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1010\tLmjF.26.1010\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF26.1010\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1020\tIAD5-1\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.920\tC\tDynein heavy chain, axonemal\tLmjF26.1020\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1020\tIAD5-1\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.920\tC\tDynein heavy chain, axonemal\tLmjF26.1020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1020\tIAD5-1\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.920\tP\tDynein heavy chain, axonemal\tLmjF26.1020\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1060\tLmjF.26.1060\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.880\tF\tRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF26.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1060\tLmjF.26.1060\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.880\tC\tRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF26.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1060\tLmjF.26.1060\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.880\tC\tRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF26.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1060\tLmjF.26.1060\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.880\tP\tRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF26.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1100\tLmjF.26.1100\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.840\tC\thypothetical protein, conserved\tLmjF26.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1120\tLmjF.26.1120\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.820\tC\taxonemal dynein light chain, putative\tLmjF26.1120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1140\tLmjF.26.1140\t\tGO:0003723\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.7.800\tF\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF26.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1140\tLmjF.26.1140\t\tGO:0016554\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.7.800\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF26.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1140\tLmjF.26.1140\t\tGO:0048255\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.7.800\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF26.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1180\tLmjF.26.1180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.760\tC\thypothetical protein, conserved\tLmjF26.1180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1180\tLmjF.26.1180\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.760\tC\thypothetical protein, conserved\tLmjF26.1180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1200\tJ28\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.740\tC\tDnaJ domain containing protein, putative\tLmjF26.1200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1220\tLmjF.26.1220\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.730\tP\thypothetical protein, conserved\tLmjF26.1220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1250\tNOP74\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.700\tC\tNucleolar protein 74, putative\tLmjF26.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1250\tNOP74\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.700\tC\tNucleolar protein 74, putative\tLmjF26.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1300\tNOP105\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.650\tC\tNucleolar protein 105, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1320\tLmjF.26.1320\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.630\tC\thypothetical protein, conserved\tLmjF26.1320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1320\tLmjF.26.1320\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.630\tC\thypothetical protein, conserved\tLmjF26.1320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1340\tLmjF.26.1340\t\tGO:0003909\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.610\tF\tDNA ligase k alpha, putative\tLmjF26.1340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1340\tLmjF.26.1340\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.610\tC\tDNA ligase k alpha, putative\tLmjF26.1340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1340\tLmjF.26.1340\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.610\tC\tDNA ligase k alpha, putative\tLmjF26.1340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1350\tLmjF.26.1350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.600\tC\tmitochondrial DNA ligase homolog, putative\tLmjF26.1350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1350\tLmjF.26.1350\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.600\tC\tmitochondrial DNA ligase homolog, putative\tLmjF26.1350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1360\tLmjF.26.1360\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.590\tC\thypothetical protein, conserved\tLmjF26.1360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1360\tLmjF.26.1360\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.590\tC\thypothetical protein, conserved\tLmjF26.1360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1410\tJ21\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.540\tC\tDnaJ domain containing protein, putative\tLmjF26.1410\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1410\tJ21\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.540\tC\tDnaJ domain containing protein, putative\tLmjF26.1410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1410\tJ21\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.540\tC\tDnaJ domain containing protein, putative\tLmjF26.1410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1470\tLmjF.26.1470\t\tGO:0018342\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.460\tP\tfarnesyltransferase beta subunit\tLmjF26.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1540\tLmjF.26.1540\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.310\tC\tglutaredoxin, putative\tLmjF26.1540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1560\tLmjF.26.1560\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.1090\tC\tSNF2 family N-terminal domain/Ring finger domain containing protein, putative\tLmjF26.1560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1610\tPRODH\t\tGO:0001306\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506411.30\tP\tProline dehydrogenase, mitochondrial\tLmjF26.1610\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1610\tPRODH\t\tGO:0004657\tGO_REF:0000011\tISM\tPfam:PF01619\tF\tProline dehydrogenase, mitochondrial\tLmjF26.1610\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1610\tPRODH\t\tGO:0004657\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506411.30\tF\tProline dehydrogenase, mitochondrial\tLmjF26.1610\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1610\tPRODH\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.210\tC\tProline dehydrogenase, mitochondrial\tLmjF26.1610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1610\tPRODH\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506411.30\tC\tProline dehydrogenase, mitochondrial\tLmjF26.1610\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1620\tCDS\t\tGO:0004605\tGO_REF:0000024\tISO\tUniProtKB:CDS1_YEAST|GeneDB:Tb927.7.220\tF\tCDP-DAG synthase, putative\tLmjF26.1620\tmRNA\ttaxon:347515\t20140805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1620\tCDS\t\tGO:0005789\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.220\tC\tCDP-DAG synthase, putative\tLmjF26.1620\tmRNA\ttaxon:347515\t20140805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1620\tCDS\t\tGO:0006655\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.220\tP\tCDP-DAG synthase, putative\tLmjF26.1620\tmRNA\ttaxon:347515\t20140805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1620\tCDS\t\tGO:0016024\tGO_REF:0000024\tISO\tUniProtKB:CDS1_YEAST|GeneDB:Tb927.7.220\tP\tCDP-DAG synthase, putative\tLmjF26.1620\tmRNA\ttaxon:347515\t20140805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1620\tCDS\t\tGO:0030173\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.220\tC\tCDP-DAG synthase, putative\tLmjF26.1620\tmRNA\ttaxon:347515\t20140805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1620\tCDS\t\tGO:0046488\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.220\tP\tCDP-DAG synthase, putative\tLmjF26.1620\tmRNA\ttaxon:347515\t20140805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1630\tS33-1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.230\tC\t40S ribosomal protein S33, putative\tLmjF26.1630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1640\tS33-2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.230\tC\t40S ribosomal protein S33, putative\tLmjF26.1640\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1710\tLmjF.26.1710\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.3170\tC\tcytochrome c oxidase subunit V, putative\tLmjF26.1710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1710\tLmjF.26.1710\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.3170\tC\tcytochrome c oxidase subunit V, putative\tLmjF26.1710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1720\tLmjF.26.1720\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3130\tC\thypothetical protein, conserved\tLmjF26.1720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1720\tLmjF.26.1720\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3130\tC\thypothetical protein, conserved\tLmjF26.1720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1760\tLmjF.26.1760\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3030\tC\thypothetical protein, conserved\tLmjF26.1760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1785\tLmjF.26.1785\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2910\tC\thistone acetyltransferase subunit NuA4, putative\tLmjF26.1785\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1785\tLmjF.26.1785\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.2910\tC\thistone acetyltransferase subunit NuA4, putative\tLmjF26.1785\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1790\tNOP287\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2900\tC\tNucleolar protein 287, putative\tLmjF26.1790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1790\tNOP287\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.2900\tC\tNucleolar protein 287, putative\tLmjF26.1790\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1850\tPOMP3\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2670\tC\tPresent in the outer mitochondrial membrane proteome 3\tLmjF26.1850\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1850\tPOMP3\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.2670\tC\tPresent in the outer mitochondrial membrane proteome 3\tLmjF26.1850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1860\tPOMP2\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.2650\tC\tPresent in the outer mitochondrial membrane proteome 2\tLmjF26.1860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1860\tPOMP2\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2650\tC\tPresent in the outer mitochondrial membrane proteome 2\tLmjF26.1860\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1870\tLmjF.26.1870\t\tGO:1990900\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2630\tC\thypothetical protein, conserved\tLmjF26.1870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1890\tLmjF.26.1890\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2600\tC\thypothetical protein, conserved\tLmjF26.1890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1890\tLmjF.26.1890\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2600\tC\thypothetical protein, conserved\tLmjF26.1890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1900\tLmjF.26.1900\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2590\tC\thypothetical protein, conserved\tLmjF26.1900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1910\tLmjF.26.1910\t\tGO:0005506\tPMID:19956997\tISO\tGeneDB:Tb09.160.1240\tF\tdeoxyhypusine hydroxylase, putative\tLmjF26.1910\tmRNA\ttaxon:347515\t20110425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1910\tLmjF.26.1910\t\tGO:0008283\tPMID:19956997\tISO\tGeneDB:Tb09.160.1240\tP\tdeoxyhypusine hydroxylase, putative\tLmjF26.1910\tmRNA\ttaxon:347515\t20110425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1910\tLmjF.26.1910\t\tGO:0019135\tPMID:19956997\tISO\tGeneDB:Tb09.160.1240\tF\tdeoxyhypusine hydroxylase, putative\tLmjF26.1910\tmRNA\ttaxon:347515\t20110425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1950\tGB4\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.2520\tC\tmicrotubule-associated protein, putative\tLmjF26.1950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1960\tNOP86\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.2490\tC\tnucleolar protein , putative\tLmjF26.1960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1970\tLmjF.26.1970\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.2450\tC\telecton transport protein SCO1/SCO2, putative\tLmjF26.1970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1970\tLmjF.26.1970\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.2450\tC\telecton transport protein SCO1/SCO2, putative\tLmjF26.1970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1970\tLmjF.26.1970\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.2450\tC\telecton transport protein SCO1/SCO2, putative\tLmjF26.1970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2000\tPOMP1\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2320\tC\tPresent in the outer mitochondrial membrane proteome 1\tLmjF26.2000\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2070\tLmjF.26.2070\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2220\tC\tSUMO1/Ulp2, putative\tLmjF26.2070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2130\tLmjF.26.2130\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2120\tC\thypothetical protein, conserved\tLmjF26.2130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2180\tLmjF.26.2180\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.2070\tC\thypothetical protein, conserved\tLmjF26.2180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2190\tLmjF.26.2190\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.2060\tC\tADP-ribosylation factor family, putative\tLmjF26.2190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2240\tLmjF.26.2240\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.2010\tC\tkynureninase, putative\tLmjF26.2240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2260\tLmjF.26.2260\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1970\tC\tSec1/Munc18 related protein, putative\tLmjF26.2260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2290\tLmjF.26.2290\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1950\tC\thypothetical protein, conserved\tLmjF26.2290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2290\tLmjF.26.2290\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1950\tP\thypothetical protein, conserved\tLmjF26.2290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2290\tLmjF.26.2290\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1950\tC\thypothetical protein, conserved\tLmjF26.2290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2305\tLmjF.26.2305\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1920\tC\thypothetical protein, conserved\tLmjF26.2305\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2305\tLmjF.26.2305\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1920\tP\thypothetical protein, conserved\tLmjF26.2305\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2305\tLmjF.26.2305\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1920\tC\thypothetical protein, conserved\tLmjF26.2305\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2320\tLmjF.26.2320\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1880\tC\thypothetical protein, conserved\tLmjF26.2320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2330\tLmjF.26.2330\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1850\tC\t60S ribosomal protein L35, putative\tLmjF26.2330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2330\tLmjF.26.2330\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1810\tC\t60S ribosomal protein L35, putative\tLmjF26.2330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2340\tLmjF.26.2340\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1850\tC\t60S ribosomal protein L35, putative\tLmjF26.2340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2340\tLmjF.26.2340\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1810\tC\t60S ribosomal protein L35, putative\tLmjF26.2340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2360\tLmjF.26.2360\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1780\tC\tSLY1 protein, putative\tLmjF26.2360\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2380\tLmjF.26.2380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1750\tC\tFibronectin type III domain containing protein, putative\tLmjF26.2380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2380\tLmjF.26.2380\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1750\tC\tFibronectin type III domain containing protein, putative\tLmjF26.2380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2380\tLmjF.26.2380\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1750\tC\tFibronectin type III domain containing protein, putative\tLmjF26.2380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2400\tLmjF.26.2400\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1720\tC\tperoxisomal membrane protein 4, putative\tLmjF26.2400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0000152\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0005634\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0006302\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tP\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0008237\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tF\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0031593\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tF\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0070531\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0070536\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tP\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0070537\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tP\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0070552\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2460\tLmjF.26.2460\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1650\tC\thypothetical protein, conserved\tLmjF26.2460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2480\tLmjF.26.2480\t\tGO:0003881\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.9.1610|GeneDB:Tb09.160.0530\tF\tCDP-diacylglycerol--inositol 3-phosphatidyltransferase, putative\tLmjF26.2480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2480\tLmjF.26.2480\t\tGO:0005783\tPMID:16475982|GO_REF:0000024\tISO\tGeneDB:Tb927.9.1610|GeneDB:Tb09.160.0530\tC\tCDP-diacylglycerol--inositol 3-phosphatidyltransferase, putative\tLmjF26.2480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2480\tLmjF.26.2480\t\tGO:0005794\tPMID:16824097|GO_REF:0000024\tISO\tGeneDB:Tb927.9.1610|GeneDB:Tb09.160.0530\tC\tCDP-diacylglycerol--inositol 3-phosphatidyltransferase, putative\tLmjF26.2480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2480\tLmjF.26.2480\t\tGO:0008526\tGO_REF:0000002\tISS\t\tF\tCDP-diacylglycerol--inositol 3-phosphatidyltransferase, putative\tLmjF26.2480\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2480\tLmjF.26.2480\t\tGO:0008654\tGO_REF:0000002\tISS\tInterPro:IPR000462\tP\tCDP-diacylglycerol--inositol 3-phosphatidyltransferase, putative\tLmjF26.2480\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2490\tLmjF.26.2490\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1600\tC\thypothetical protein, conserved\tLmjF26.2490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2520\tJ73\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1560\tC\tchaperone protein DnaJ, putative\tLmjF26.2520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2590\tLmjF.26.2590\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1440\tC\tParaquat-inducible protein A, putative\tLmjF26.2590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2590\tLmjF.26.2590\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1440\tC\tParaquat-inducible protein A, putative\tLmjF26.2590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2590\tLmjF.26.2590\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1440\tC\tParaquat-inducible protein A, putative\tLmjF26.2590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2610\tLmjF.26.2610\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1400\tC\tFAD binding domain containing protein, putative\tLmjF26.2610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2610\tLmjF.26.2610\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1400\tC\tFAD binding domain containing protein, putative\tLmjF26.2610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2650\tLmjF.26.2650\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1350\tP\thypothetical protein, conserved\tLmjF26.2650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2660\tNUP92\t\tGO:0000922\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1340\tC\tNucleoporin NUP92\tLmjF26.2660|MLP2\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2660\tNUP92\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1340\tC\tNucleoporin NUP92\tLmjF26.2660|MLP2\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2660\tNUP92\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1340\tC\tNucleoporin NUP92\tLmjF26.2660|MLP2\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2660\tNUP92\t\tGO:0005816\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1340\tC\tNucleoporin NUP92\tLmjF26.2660|MLP2\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2660\tNUP92\t\tGO:0044615\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.1340\tC\tNucleoporin NUP92\tLmjF26.2660|MLP2\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0040\tFACE1\t\tGO:0004222\tGO_REF:0000002\tISM\tInterPro:IPR027057\tF\tCAAX prenyl protease 1, putative\tLmjF27.0040|AFC1|STE24\tmRNA\ttaxon:347515\t20150410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0040\tFACE1\t\tGO:0006508\tGO_REF:0000002\tISM\tInterPro:IPR027057\tP\tCAAX prenyl protease 1, putative\tLmjF27.0040|AFC1|STE24\tmRNA\ttaxon:347515\t20150410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0040\tFACE1\t\tGO:0071586\tGO_REF:0000002\tISM\tInterPro:IPR027057\tP\tCAAX prenyl protease 1, putative\tLmjF27.0040|AFC1|STE24\tmRNA\ttaxon:347515\t20150410\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0050\tLmjF.27.0050\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.620\tC\tDEAD-box helicase-like protein\tLmjF27.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0080\tLmjF.27.0080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.660\tC\thypothetical protein, conserved\tLmjF27.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0080\tLmjF.27.0080\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.660\tC\thypothetical protein, conserved\tLmjF27.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0080\tLmjF.27.0080\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.660\tC\thypothetical protein, conserved\tLmjF27.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0090\tLmjF.27.0090\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.680\tC\tcytochrome p450-like protein\tLmjF27.0090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0100\tLmjF.27.0100\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.690\tP\tCMGC/RCK protein kinase, putative\tLmjF27.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0100\tLmjF.27.0100\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.690\tC\tCMGC/RCK protein kinase, putative\tLmjF27.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0110\tLmjF.27.0110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.700\tC\thypothetical protein, conserved\tLmjF27.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0110\tLmjF.27.0110\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.700\tC\thypothetical protein, conserved\tLmjF27.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0110\tLmjF.27.0110\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.700\tC\thypothetical protein, 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to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0130\tLmjF.27.0130\t\tGO:0030529\tPMID:19247446|GO_REF:0000024\tISO\tGeneDB:Tb927.3.720\tC\tWW domain/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF27.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0150\tLmjF.27.0150\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF27.0150\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0170\tLmjF.27.0170\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.760\tC\thypothetical protein, conserved\tLmjF27.0170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0170\tLmjF.27.0170\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.760\tC\thypothetical protein, conserved\tLmjF27.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0200\tLmjF.27.0200\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF27.0200\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0200\tLmjF.27.0200\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.790\tC\thypothetical protein, conserved\tLmjF27.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0200\tLmjF.27.0200\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.790\tP\thypothetical protein, conserved\tLmjF27.0200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0210\tVIT1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.800\tC\tVacuolar iron transporter 1, putative\tLmjF27.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0210\tVIT1\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.800\tC\tVacuolar iron transporter 1, putative\tLmjF27.0210\tmRNA\ttaxon:347515\t20150310\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0220\tLmjF.27.0220\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.810\tC\thypothetical protein, conserved\tLmjF27.0220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0220\tLmjF.27.0220\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.810\tC\thypothetical protein, conserved\tLmjF27.0220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0220\tLmjF.27.0220\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.810\tC\thypothetical protein, conserved\tLmjF27.0220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0230\tLmjF.27.0230\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.820\tC\thypothetical protein, conserved\tLmjF27.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0230\tLmjF.27.0230\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.820\tP\thypothetical protein, conserved\tLmjF27.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0250\tLmjF.27.0250\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.830\tC\tflap endonuclease-1 (FEN-1), putative\tLmjF27.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0290\tACP\t\tGO:0000036\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.860\tF\tacyl carrier protein, mitochondrial, putative\tLmjF27.0290|NDUFAB1\tmRNA\ttaxon:347515\t20100803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0290\tACP\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.860\tC\tacyl carrier protein, mitochondrial, putative\tLmjF27.0290|NDUFAB1\tmRNA\ttaxon:347515\t20141210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0290\tACP\t\tGO:0005759\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.860\tC\tacyl carrier protein, mitochondrial, putative\tLmjF27.0290|NDUFAB1\tmRNA\ttaxon:347515\t20141210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0290\tACP\t\tGO:0006633\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.860\tP\tacyl carrier protein, mitochondrial, putative\tLmjF27.0290|NDUFAB1\tmRNA\ttaxon:347515\t20141210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0310\tLmjF.27.0310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.910\tC\tTATA-binding protein interacting (TIP20), putative\tLmjF27.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0320\tLmjF.27.0320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.920\tC\thypothetical protein, conserved\tLmjF27.0320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0330\tLmjF.27.0330\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.930\tC\thypothetical protein, conserved\tLmjF27.0330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0330\tLmjF.27.0330\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.930\tC\thypothetical protein, conserved\tLmjF27.0330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0340\tLmjF.27.0340\t\tGO:0009451\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.940\tP\tMP44, putative\tLmjF27.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0350\tLmjF.27.0350\t\tGO:0003723\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.950\tF\tRNA recognition motif (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF27.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0350\tLmjF.27.0350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.950\tC\tRNA recognition motif (a.k.a. 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0370\tLmjF.27.0370\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.970\tC\thypothetical protein, conserved\tLmjF27.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0380\tNup158\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.980\tC\tNucleoporin NUP158\tLmjF27.0380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0380\tNup158\t\tGO:0005643\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.980\tC\tNucleoporin NUP158\tLmjF27.0380\tmRNA\ttaxon:347515\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0380\tNup158\t\tGO:0031080\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.980\tC\tNucleoporin NUP158\tLmjF27.0380\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0390\tLmjF.27.0390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.990\tC\tautophagy protein APG9, putative\tLmjF27.0390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0400\tLmjF.27.0400\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1000\tC\thypothetical protein, conserved\tLmjF27.0400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0400\tLmjF.27.0400\t\tGO:0005643\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1000\tC\thypothetical protein, conserved\tLmjF27.0400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0400\tLmjF.27.0400\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1000\tC\thypothetical protein, conserved\tLmjF27.0400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0400\tLmjF.27.0400\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1000\tP\thypothetical protein, conserved\tLmjF27.0400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0410\tJ18\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1010\tC\theat shock protein DNAJ, putative\tLmjF27.0410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0420\tLmjF.27.0420\t\tGO:0004747\tPMID:17558452\tIDA\t\tF\tribokinase\tLmjF27.0420\tmRNA\ttaxon:347515\t20170612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0420\tLmjF.27.0420\t\tGO:0006014\tPMID:17558452\tIDA\t\tP\tribokinase\tLmjF27.0420\tmRNA\ttaxon:347515\t20170612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0420\tLmjF.27.0420\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1020\tC\tribokinase\tLmjF27.0420\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0430\tLmjF.27.0430\t\tGO:0000776\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1030\tC\thypothetical protein, conserved\tLmjF27.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0430\tLmjF.27.0430\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1030\tC\thypothetical protein, conserved\tLmjF27.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0430\tLmjF.27.0430\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1030\tP\thypothetical protein, conserved\tLmjF27.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0440\tLmjF.27.0440\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1040\tC\thypothetical protein, conserved\tLmjF27.0440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0450\tLmjF.27.0450\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1050\tC\tribosome production factor 1, putative\tLmjF27.0450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0450\tLmjF.27.0450\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1050\tC\tribosome production factor 1, putative\tLmjF27.0450\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0470\tgat3\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1070\tC\tglycosomal transporter (GAT3), putative\tLmjF27.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0470\tgat3\t\tGO:0020022\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1070\tC\tglycosomal transporter (GAT3), putative\tLmjF27.0470\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0470\tgat3\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tglycosomal transporter (GAT3), putative\tLmjF27.0470\tmRNA\ttaxon:347515\t20090608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0480\tNOP60\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1080\tC\tNucleolar protein 60, putative\tLmjF27.0480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0480\tNOP60\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1080\tC\tNucleolar protein 60, putative\tLmjF27.0480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0490\tLmjF.27.0490\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1130\tC\tcalpain-like cysteine peptidase, putative\tLmjF27.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0490\tLmjF.27.0490\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1130\tC\tcalpain-like cysteine peptidase, putative\tLmjF27.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0500\tLmjF.27.0500\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1130\tC\tcalpain-like cysteine peptidase, putative\tLmjF27.0500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0500\tLmjF.27.0500\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1130\tC\tcalpain-like cysteine peptidase, putative\tLmjF27.0500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0510\tLmjF.27.0510\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1130\tC\tcalpain-like cysteine peptidase, putative\tLmjF27.0510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0510\tLmjF.27.0510\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1130\tC\tcalpain-like cysteine peptidase, putative\tLmjF27.0510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0520\tRSP3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1150\tC\tradial spoke protein 3, putative\tLmjF27.0520\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0520\tRSP3\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1150\tC\tradial spoke protein 3, putative\tLmjF27.0520\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0520\tRSP3\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1150\tP\tradial spoke protein 3, putative\tLmjF27.0520\tmRNA\ttaxon:347515\t20150311\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0580\tLmjF.27.0580\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1200\tC\thypothetical protein, conserved\tLmjF27.0580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0610\tLmjF.27.0610\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1230\tC\thypothetical protein, conserved\tLmjF27.0610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0610\tLmjF.27.0610\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1230\tC\thypothetical protein, conserved\tLmjF27.0610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0620\tLmjF.27.0620\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1240\tC\thypothetical protein, conserved\tLmjF27.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0620\tLmjF.27.0620\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1240\tC\thypothetical protein, conserved\tLmjF27.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0620\tLmjF.27.0620\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1240\tP\thypothetical protein, conserved\tLmjF27.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0620\tLmjF.27.0620\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1240\tC\thypothetical protein, conserved\tLmjF27.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0630\tLmjF.27.0630\t\tGO:0003723\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.1250\tF\tMitochondrial SSU ribosomal protein, putative\tLmjF27.0630\tmRNA\ttaxon:347515\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0630\tLmjF.27.0630\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1250\tC\tMitochondrial SSU ribosomal protein, putative\tLmjF27.0630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0630\tLmjF.27.0630\t\tGO:0043631\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.1250\tP\tMitochondrial SSU ribosomal protein, putative\tLmjF27.0630\tmRNA\ttaxon:347515\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0630\tLmjF.27.0630\t\tGO:0048255\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.1250\tP\tMitochondrial SSU ribosomal protein, putative\tLmjF27.0630\tmRNA\ttaxon:347515\t20120912\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0650\tLmjF.27.0650\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1270\tC\thypothetical protein, conserved\tLmjF27.0650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0650\tLmjF.27.0650\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1270\tC\thypothetical protein, conserved\tLmjF27.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0730\tLmjF.27.0730\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1310\tC\treductase, putative\tLmjF27.0730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0730\tLmjF.27.0730\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1310\tC\treductase, putative\tLmjF27.0730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0740\tNDHK\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1320\tC\tNADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor\tLmjF27.0740|NUKM|NDUFS7\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0740\tNDHK\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1320\tC\tNADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor\tLmjF27.0740|NUKM|NDUFS7\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0745\tLmjF.27.0745\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1330\tC\thypothetical protein, conserved (pseudogene)\tLmjF27.0745\tpseudogenic_transcript\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0745\tLmjF.27.0745\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1330\tC\thypothetical protein, conserved (pseudogene)\tLmjF27.0745\tpseudogenic_transcript\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0745\tLmjF.27.0745\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1330\tC\thypothetical protein, conserved (pseudogene)\tLmjF27.0745\tpseudogenic_transcript\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0770\tFC1\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1340\tC\tFlagella connector protein 1\tLmjF27.0770\tmRNA\ttaxon:347515\t20160714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0770\tFC1\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1340\tP\tFlagella connector protein 1\tLmjF27.0770\tmRNA\ttaxon:347515\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0770\tFC1\t\tGO:0044458\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1340\tP\tFlagella connector protein 1\tLmjF27.0770\tmRNA\ttaxon:347515\t20160714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0780\tMCU\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1350\tC\tcalcium uniporter protein, mitochondrial\tLmjF27.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0780\tMCU\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1350\tC\tcalcium uniporter protein, mitochondrial\tLmjF27.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0780\tMCU\t\tGO:0005783\tPMID:21685888\tISO\tGeneDB:Tb927.11.1350\tC\tcalcium uniporter protein, mitochondrial\tLmjF27.0780\tmRNA\ttaxon:347515\t20120430\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0780\tMCU\t\tGO:0015085\tPMID:21685888\tISO\tGeneDB:Tb927.11.1350\tF\tcalcium uniporter protein, mitochondrial\tLmjF27.0780\tmRNA\ttaxon:347515\t20120430\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0780\tMCU\t\tGO:0031966\tPMID:21685888\tISO\tGeneDB:Tb927.11.1350\tC\tcalcium uniporter protein, mitochondrial\tLmjF27.0780\tmRNA\ttaxon:347515\t20120430\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0780\tMCU\t\tGO:0070588\tPMID:21685888\tISO\tGeneDB:Tb927.11.1350\tP\tcalcium uniporter protein, mitochondrial\tLmjF27.0780\tmRNA\ttaxon:347515\t20120430\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0810\tLmjF.27.0810\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1370\tC\tglutaredoxin-like protein\tLmjF27.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0810\tLmjF.27.0810\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1370\tC\tglutaredoxin-like protein\tLmjF27.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0810\tLmjF.27.0810\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1370\tC\tglutaredoxin-like protein\tLmjF27.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0810\tLmjF.27.0810\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1370\tC\tglutaredoxin-like protein\tLmjF27.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0850\tLmjF.27.0850\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1410\tC\thypothetical protein, conserved\tLmjF27.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0850\tLmjF.27.0850\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1410\tC\thypothetical protein, conserved\tLmjF27.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0870\tLmjF.27.0870\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1430\tC\tRepeat of unknown function (DUF1126)/EF-hand domain pair, putative\tLmjF27.0870\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0875\tLmjF.27.0875\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1440\tC\thypothetical protein\tLmjF27.0875\tpseudogenic_transcript\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0880\tLmjF.27.0880\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1450\tC\t2-oxoglutarate dehydrogenase subunit, putative\tLmjF27.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0880\tLmjF.27.0880\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1450\tC\t2-oxoglutarate dehydrogenase subunit, putative\tLmjF27.0880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0880\tLmjF.27.0880\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1450\tC\t2-oxoglutarate dehydrogenase subunit, putative\tLmjF27.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0930\tLmjF.27.0930\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1540\tC\tisovaleryl-coA dehydrogenase, putative\tLmjF27.0930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0940\tLmjF.27.0940\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1550\tC\tXRN 5'-3' exonuclease N-terminus, putative\tLmjF27.0940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0990\tLmjF.27.0990\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1590\tC\thypothetical protein, conserved\tLmjF27.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0990\tLmjF.27.0990\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1590\tC\thypothetical protein, conserved\tLmjF27.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1010\tLmjF.27.1010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1610\tC\thypothetical protein, conserved\tLmjF27.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1010\tLmjF.27.1010\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1610\tC\thypothetical protein, conserved\tLmjF27.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1020\tLmjF.27.1020\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1620\tC\thypothetical protein, conserved\tLmjF27.1020\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1030\tLmjF.27.1030\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1630\tC\thypothetical protein, conserved\tLmjF27.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1040\tLmjF.27.1040\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1640\tC\thypothetical protein, conserved\tLmjF27.1040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1040\tLmjF.27.1040\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1640\tP\thypothetical protein, conserved\tLmjF27.1040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1040\tLmjF.27.1040\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1640\tP\thypothetical protein, conserved\tLmjF27.1040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1040\tLmjF.27.1040\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1640\tC\thypothetical protein, conserved\tLmjF27.1040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1045\tLmjF.27.1045\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1650\tC\thypothetical protein, conserved\tLmjF27.1045\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1050\tLmjF.27.1050\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1660\tC\tvesicular transport protein (CDC48 homologue), putative\tLmjF27.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1060\tLmjF.27.1060\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1670\tC\tcysteine desulfurase, putative\tLmjF27.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1060\tLmjF.27.1060\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1670\tC\tcysteine desulfurase, putative\tLmjF27.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1060\tLmjF.27.1060\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1670\tC\tcysteine desulfurase, putative\tLmjF27.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1060\tLmjF.27.1060\t\tGO:0031071\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1670\tF\tcysteine desulfurase, putative\tLmjF27.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1070\tLmjF.27.1070\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1680\tC\tvesicular-fusion ATPase-like protein, putative\tLmjF27.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1100\tLmjF.27.1100\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1700\tC\thypothetical protein, conserved\tLmjF27.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1110\tgBP21\t\tGO:0003723\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1710\tF\tmitochondrial RNA binding protein 1\tLmjF27.1110\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1110\tgBP21\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1710\tF\tmitochondrial RNA binding protein 1\tLmjF27.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1110\tgBP21\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1710\tC\tmitochondrial RNA binding protein 1\tLmjF27.1110\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1110\tgBP21\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1710\tP\tmitochondrial RNA binding protein 1\tLmjF27.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1110\tgBP21\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1710\tC\tmitochondrial RNA binding protein 1\tLmjF27.1110\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1120\tLmjF.27.1120\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1720\tC\thypothetical protein, conserved\tLmjF27.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1120\tLmjF.27.1120\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1720\tC\thypothetical protein, conserved\tLmjF27.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1120\tLmjF.27.1120\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1720\tC\thypothetical protein, conserved\tLmjF27.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1130\tIFT88\t\tGO:0008361\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1740\tP\tintraflagellar transport protein 88, putative\tLmjF27.1130\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1130\tIFT88\t\tGO:0030010\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1740\tP\tintraflagellar transport protein 88, putative\tLmjF27.1130\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1130\tIFT88\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1740\tC\tintraflagellar transport protein 88, putative\tLmjF27.1130\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1130\tIFT88\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1740\tP\tintraflagellar transport protein 88, putative\tLmjF27.1130\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1130\tIFT88\t\tGO:0060271\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1740\tP\tintraflagellar transport protein 88, putative\tLmjF27.1130\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1150\tLmjF.27.1150\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1760\tC\tJmjC domain, hydroxylase, putative\tLmjF27.1150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1150\tLmjF.27.1150\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1760\tC\tJmjC domain, hydroxylase, putative\tLmjF27.1150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1150\tLmjF.27.1150\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1760\tC\tJmjC domain, hydroxylase, putative\tLmjF27.1150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1170\tLmjF.27.1170\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1770\tC\thypothetical protein, conserved\tLmjF27.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1170\tLmjF.27.1170\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1770\tC\thypothetical protein, conserved\tLmjF27.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1170\tLmjF.27.1170\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1770\tC\thypothetical protein, conserved\tLmjF27.1170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1200\tLmjF.27.1200\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1810\tC\tRING-H2 zinc finger, putative\tLmjF27.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1200\tLmjF.27.1200\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1810\tC\tRING-H2 zinc finger, putative\tLmjF27.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1210\tLmjF.27.1210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1820\tC\ttranslation initiation factor eIF2B delta subunit, putative\tLmjF27.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1250\tSTRAP\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1890\tC\tWD domain, G-beta repeat, putative\tLmjF27.1250\tmRNA\ttaxon:347515\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1250\tSTRAP\t\tGO:0020022\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1890\tC\tWD domain, G-beta repeat, putative\tLmjF27.1250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1260\tLmjF.27.1260\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1900\tC\tT-complex protein 1, beta subunit, putative\tLmjF27.1260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1260\tLmjF.27.1260\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1900\tC\tT-complex protein 1, beta subunit, putative\tLmjF27.1260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1260\tLmjF.27.1260\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1900\tC\tT-complex protein 1, beta subunit, putative\tLmjF27.1260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1265\tLmjF.27.1265\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1910\tC\tcation transporter, putative\tLmjF27.1265\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1270\tLmjF.27.1270\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1930\tC\tubiquitin carboxyl-terminal hydrolase, putative\tLmjF27.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1270\tLmjF.27.1270\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1930\tC\tubiquitin carboxyl-terminal hydrolase, putative\tLmjF27.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1300\tLmjF.27.1300\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tKH domain containing protein, putative\tLmjF27.1300\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1300\tLmjF.27.1300\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1980\tF\tKH domain containing protein, putative\tLmjF27.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1300\tLmjF.27.1300\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1980\tC\tKH domain containing protein, putative\tLmjF27.1300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1310\tLmjF.27.1310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1990\tC\targinyl-tRNA synthetase, putative\tLmjF27.1310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1310\tLmjF.27.1310\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.1990\tC\targinyl-tRNA synthetase, putative\tLmjF27.1310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1320\tLmjF.27.1320\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2000\tC\tCupin-like domain containing protein, putative\tLmjF27.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1320\tLmjF.27.1320\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2000\tC\tCupin-like domain containing protein, putative\tLmjF27.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1330\tLmjF.27.1330\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2010\tC\thypothetical protein, conserved\tLmjF27.1330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1360\tLmjF.27.1360\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2030\tC\thypothetical protein, conserved\tLmjF27.1360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1360\tLmjF.27.1360\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2030\tP\thypothetical protein, conserved\tLmjF27.1360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1380\tLmjF.27.1380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2050|GeneDB:Tb927.11.2060\tC\t60S acidic ribosomal protein P0, putative\tLmjF27.1380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1390\tLmjF.27.1390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2050|GeneDB:Tb927.11.2060\tC\t60S acidic ribosomal protein P0, putative\tLmjF27.1390\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1410\tLmjF.27.1410\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2080\tC\thypothetical protein, conserved\tLmjF27.1410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1410\tLmjF.27.1410\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2080\tC\thypothetical protein, conserved\tLmjF27.1410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1410\tLmjF.27.1410\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2080\tC\thypothetical protein, conserved\tLmjF27.1410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1420\tLmjF.27.1420\t\tGO:0004305\tPMID:18587155|GO_REF:0000024\tISO\tGeneDB:Tb927.11.2090\tF\tcholine kinase\tLmjF27.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1420\tLmjF.27.1420\t\tGO:0004305\tPMID:18489261\tIDA\t\tF\tcholine kinase\tLmjF27.1420\tmRNA\ttaxon:347515\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1420\tLmjF.27.1420\t\tGO:0005829\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.11.2090\tC\tcholine kinase\tLmjF27.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1420\tLmjF.27.1420\t\tGO:0006646\tPMID:18587155|GO_REF:0000024\tISO\tGeneDB:Tb927.11.2090\tP\tcholine kinase\tLmjF27.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1420\tLmjF.27.1420\t\tGO:0006646\tPMID:18489261\tIDA\t\tP\tcholine kinase\tLmjF27.1420\tmRNA\ttaxon:347515\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1430\tLmjF.27.1430\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2100\tC\thypothetical protein, conserved\tLmjF27.1430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1430\tLmjF.27.1430\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2100\tC\thypothetical protein, conserved\tLmjF27.1430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1440\tLmjF.27.1440\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2110\tC\tSnf7, putative\tLmjF27.1440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1440\tLmjF.27.1440\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2110\tC\tSnf7, putative\tLmjF27.1440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1440\tLmjF.27.1440\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2110\tC\tSnf7, putative\tLmjF27.1440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1450\tLmjF.27.1450\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2120\tC\tCBF/Mak21 family, putative\tLmjF27.1450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1450\tLmjF.27.1450\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2120\tC\tCBF/Mak21 family, putative\tLmjF27.1450\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1460\tLmjF.27.1460\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2130\tC\tproteasome regulatory non-ATP-ase subunit 3, putative\tLmjF27.1460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1460\tLmjF.27.1460\t\tGO:0005838\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2130\tC\tproteasome regulatory non-ATP-ase subunit 3, putative\tLmjF27.1460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1460\tLmjF.27.1460\t\tGO:0006511\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2130\tP\tproteasome regulatory non-ATP-ase subunit 3, putative\tLmjF27.1460\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1480\tLmjF.27.1480\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2140\tC\tcyclic nucleotide-binding domain containing protein, putative\tLmjF27.1480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1480\tLmjF.27.1480\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF27.1480\tmRNA\ttaxon:347515\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1500\tLmjF.27.1500\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2160\tC\thypothetical protein, conserved\tLmjF27.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1500\tLmjF.27.1500\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2160\tC\thypothetical protein, conserved\tLmjF27.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1500\tLmjF.27.1500\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2160\tC\thypothetical protein, conserved\tLmjF27.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1500\tLmjF.27.1500\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2160\tC\thypothetical protein, conserved\tLmjF27.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1510\tLmjF.27.1510\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2170\tC\thypothetical protein, conserved\tLmjF27.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1520\tLmjF.27.1520\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2180\tC\thypothetical protein, conserved\tLmjF27.1520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1520\tLmjF.27.1520\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2180\tC\thypothetical protein, conserved\tLmjF27.1520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1560\tLmjF.27.1560\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tdiacylglycerol acyltransferase, putative\tLmjF27.1560\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1560\tLmjF.27.1560\t\tGO:0019432\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.11.2210|GeneDB:Tb11.18.0008\tP\tdiacylglycerol acyltransferase, putative\tLmjF27.1560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1570\tLmjF.27.1570\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2220\tC\thypothetical protein, conserved\tLmjF27.1570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1590\tLmjF.27.1590\t\tGO:0004144\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.11.2210|GeneDB:LmjF.27.1590\tF\tdiacylglycerol acyltransferase, putative\tLmjF27.1590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1590\tLmjF.27.1590\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2210\tC\tdiacylglycerol acyltransferase, putative\tLmjF27.1590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1590\tLmjF.27.1590\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tdiacylglycerol acyltransferase, putative\tLmjF27.1590\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1630\tIC140\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2270\tP\tinner dynein arm I1 intermediate chain, axonemal\tLmjF27.1630\tmRNA\ttaxon:347515\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1640\tLmjF.27.1640\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2280\tC\tBRO1-like domain/ALIX V-shaped domain binding to HIV, putative\tLmjF27.1640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1640\tLmjF.27.1640\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2280\tC\tBRO1-like domain/ALIX V-shaped domain binding to HIV, putative\tLmjF27.1640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1670\tLmjF.27.1670\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2330\tC\tmolybdopterin synthase sulphurylase-like protein, putative\tLmjF27.1670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1670\tLmjF.27.1670\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2330\tC\tmolybdopterin synthase sulphurylase-like protein, putative\tLmjF27.1670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1680\tLmjF.27.1680\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2340\tC\thypothetical protein, conserved\tLmjF27.1680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1690\tMEX67\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2370\tC\tmRNA export factor MEX67\tLmjF27.1690\tmRNA\ttaxon:347515\t20150422\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1805\tLmjF.27.1805\t\tGO:0008017\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4210\tF\tglycosomal protein P60\tLmjF27.1805\tmRNA\ttaxon:347515\t20090101\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1805\tLmjF.27.1805\t\tGO:0012506\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4210\tC\tglycosomal protein P60\tLmjF27.1805\tmRNA\ttaxon:347515\t20090101\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1805\tLmjF.27.1805\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4210\tC\tglycosomal protein 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1830\tLmjF.27.1830\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4240\tC\tGTP binding protein, putative\tLmjF27.1830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1840\tLmjF.27.1840\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4280\tC\tDual specificity phosphatase, catalytic domain containing protein, putative\tLmjF27.1840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1850\tPFR5\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4330\tC\tparaflagellar rod protein 5, putative\tLmjF27.1850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1870\tTRYS\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4370\tC\ttrypanothione synthetase\tLmjF27.1870\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1870\tTRYS\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4370\tP\ttrypanothione synthetase\tLmjF27.1870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1880\tLmjF.27.1880\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4380\tC\thypothetical protein, conserved\tLmjF27.1880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1880\tLmjF.27.1880\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4380\tC\thypothetical protein, conserved\tLmjF27.1880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1880\tLmjF.27.1880\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4380\tC\thypothetical protein, conserved\tLmjF27.1880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1890\tLmjF.27.1890\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4390\tC\tendo/exonuclease Mre11, putative\tLmjF27.1890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1895\tLmjF.27.1895\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4400\tC\thypothetical protein, conserved\tLmjF27.1895\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1895\tLmjF.27.1895\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4400\tC\thypothetical protein, conserved\tLmjF27.1895\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1895\tLmjF.27.1895\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4400\tC\thypothetical protein, conserved\tLmjF27.1895\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1895\tLmjF.27.1895\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4400\tC\thypothetical protein, conserved\tLmjF27.1895\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1910\tLmjF.27.1910\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4445\tP\thypothetical protein, conserved\tLmjF27.1910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1920\tLmjF.27.1920\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4470\tC\thypothetical protein, conserved\tLmjF27.1920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1940\tCRK9\t\tGO:0000086\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4510\tP\tcdc2-related kinase 9\tLmjF27.1940\tmRNA\ttaxon:347515\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1940\tCRK9\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR001245|InterPro:IPR002290\tF\tcdc2-related kinase 9\tLmjF27.1940\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1940\tCRK9\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR002290\tF\tcdc2-related kinase 9\tLmjF27.1940\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1940\tCRK9\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4510\tC\tcdc2-related kinase 9\tLmjF27.1940\tmRNA\ttaxon:347515\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1940\tCRK9\t\tGO:0045291\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4510\tP\tcdc2-related kinase 9\tLmjF27.1940\tmRNA\ttaxon:347515\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1960\tLmjF.27.1960\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4530\tC\tIntraflagellar transport protein 43, putative\tLmjF27.1960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1960\tLmjF.27.1960\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4530\tC\tIntraflagellar transport protein 43, putative\tLmjF27.1960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1960\tLmjF.27.1960\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4530\tC\tIntraflagellar transport protein 43, putative\tLmjF27.1960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1970\tLmjF.27.1970\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4540\tC\tsmall nuclear ribonucleoprotein protein, putative\tLmjF27.1970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1980\tLmjF.27.1980\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4550\tC\tFtsJ cell division protein, putative\tLmjF27.1980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2000\tLmjF.27.2000\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4580\tC\tGMP-PDE, delta subunit, putative\tLmjF27.2000\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2000\tLmjF.27.2000\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4580\tC\tGMP-PDE, delta subunit, putative\tLmjF27.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2000\tLmjF.27.2000\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4580\tC\tGMP-PDE, delta subunit, putative\tLmjF27.2000\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2000\tLmjF.27.2000\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4580\tC\tGMP-PDE, delta subunit, putative\tLmjF27.2000\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2030\tLmjF.27.2030\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4590\tC\tbranched-chain amino acid aminotransferase, putative\tLmjF27.2030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2030\tLmjF.27.2030\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4610\tC\tbranched-chain amino acid aminotransferase, putative\tLmjF27.2030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2030\tLmjF.27.2030\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4610\tC\tbranched-chain amino acid aminotransferase, putative\tLmjF27.2030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2030\tLmjF.27.2030\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4610\tC\tbranched-chain amino acid aminotransferase, putative\tLmjF27.2030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2060\tLmjF.27.2060\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4650\tC\thypothetical protein, conserved\tLmjF27.2060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2060\tLmjF.27.2060\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4650\tC\thypothetical protein, conserved\tLmjF27.2060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2090\tLmjF.27.2090\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4700\tC\thypothetical protein, conserved\tLmjF27.2090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2090\tLmjF.27.2090\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4700\tC\thypothetical protein, conserved\tLmjF27.2090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2100\tLmjF.27.2100\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4710\tF\tRNA-binding protein, putative\tLmjF27.2100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2100\tLmjF.27.2100\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4710\tC\tRNA-binding protein, putative\tLmjF27.2100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2100\tLmjF.27.2100\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4710\tC\tRNA-binding protein, putative\tLmjF27.2100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2100\tLmjF.27.2100\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4710\tP\tRNA-binding protein, putative\tLmjF27.2100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2100\tLmjF.27.2100\t\tGO:0016607\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4710\tC\tRNA-binding protein, putative\tLmjF27.2100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2120\tLmjF.27.2120\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4900\tC\tMSP (Major sperm protein) domain containing protein, putative\tLmjF27.2120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2170\tLmjF.27.2170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4810\tC\thypothetical protein, conserved\tLmjF27.2170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2170\tLmjF.27.2170\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4810\tC\thypothetical protein, conserved\tLmjF27.2170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2170\tLmjF.27.2170\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4810\tP\thypothetical protein, conserved\tLmjF27.2170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2180\tLmjF.27.2180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4830\tC\tNLI interacting factor-like phosphatase, putative\tLmjF27.2180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2200\tLmjF.27.2200\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4850\tC\tthioredoxin, putative\tLmjF27.2200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2210\tLmjF.27.2210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4870\tC\tkinetoplastid-specific dual specificity phosphatase, putative\tLmjF27.2210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2220\tLmjF.27.2220\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4740\tC\tribosomal protein L11, putative\tLmjF27.2220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2240\tLmjF.27.2240\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4970\tC\thypothetical protein, conserved\tLmjF27.2240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2250\tLmjF.27.2250\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4980\tC\tEMG1/NEP1 methyltransferase, putative\tLmjF27.2250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2250\tLmjF.27.2250\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4980\tC\tEMG1/NEP1 methyltransferase, putative\tLmjF27.2250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2250\tLmjF.27.2250\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4980\tC\tEMG1/NEP1 methyltransferase, putative\tLmjF27.2250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2290\tLmjF.27.2290\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5020\tC\tacyl-CoA oxidase, putative\tLmjF27.2290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2300\tLmjF.27.2300\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5030\tC\ttranscription elongation regulator-like protein\tLmjF27.2300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2300\tLmjF.27.2300\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5030\tC\ttranscription elongation regulator-like protein\tLmjF27.2300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2305\tLmjF.27.2305\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5040\tC\tMORN repeat, putative\tLmjF27.2305\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2305\tLmjF.27.2305\t\tGO:0097542\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5040\tC\tMORN repeat, putative\tLmjF27.2305\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2320\tLmjF.27.2320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5050\tC\tprotein phosphatase 2C, putative\tLmjF27.2320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2320\tLmjF.27.2320\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5050\tC\tprotein phosphatase 2C, putative\tLmjF27.2320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2320\tLmjF.27.2320\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5050\tC\tprotein phosphatase 2C, putative\tLmjF27.2320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2350\tVAMP7\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511627.60\tC\tVesicle-associated membrane protein 7\tLmjF27.2350|VAMP1\tmRNA\ttaxon:347515\t20141208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2350\tVAMP7\t\tGO:0005886\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507801.179\tC\tVesicle-associated membrane protein 7\tLmjF27.2350|VAMP1\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2350\tVAMP7\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507801.179\tC\tVesicle-associated membrane protein 7\tLmjF27.2350|VAMP1\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2350\tVAMP7\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507801.179\tC\tVesicle-associated membrane protein 7\tLmjF27.2350|VAMP1\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2350\tVAMP7\t\tGO:0061025\tGO_REF:0000012\tISA\tUniProtKB:P47192\tP\tVesicle-associated membrane protein 7\tLmjF27.2350|VAMP1\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2350\tVAMP7\t\tGO:0071470\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507801.179\tP\tVesicle-associated membrane protein 7\tLmjF27.2350|VAMP1\tmRNA\ttaxon:347515\t20160728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2360\tLmjF.27.2360\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5130\tC\thypothetical protein, conserved\tLmjF27.2360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2360\tLmjF.27.2360\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5130\tC\thypothetical protein, conserved\tLmjF27.2360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2390\tLmjF.27.2390\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5150\tC\tTPR-repeat protein, putative\tLmjF27.2390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2390\tLmjF.27.2390\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5150\tP\tTPR-repeat protein, putative\tLmjF27.2390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2400\tJ2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5160\tC\theat shock protein DNAJ, putative\tLmjF27.2400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2410\tLmjF.27.2410\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5180\tC\taldo-keto reductase-like protein\tLmjF27.2410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2420\tLmjF.27.2420\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5190\tC\thypothetical protein, conserved\tLmjF27.2420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2430\tLmjF.27.2430\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5200\tP\thypothetical protein, conserved\tLmjF27.2430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2440\tKAR1\t\tGO:0004316\tPMID:20145708\tIGI\t\tF\t3-oxoacyl-ACP reductase, putative\tLmjF27.2440\tmRNA\ttaxon:347515\t20100310\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2440\tKAR1\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5210\tC\t3-oxoacyl-ACP reductase, putative\tLmjF27.2440\tmRNA\ttaxon:347515\t20150930\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2440\tKAR1\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5210\tC\t3-oxoacyl-ACP reductase, putative\tLmjF27.2440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2480\tLmjF.27.2480\t\tGO:0000398\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5240\tP\tWD-repeat protein\tLmjF27.2480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2480\tLmjF.27.2480\t\tGO:0000974\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5240\tC\tWD-repeat protein\tLmjF27.2480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2480\tLmjF.27.2480\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5240\tC\tWD-repeat protein\tLmjF27.2480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2480\tLmjF.27.2480\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5240\tC\tWD-repeat protein\tLmjF27.2480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2480\tLmjF.27.2480\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5240\tC\tWD-repeat protein\tLmjF27.2480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2480\tLmjF.27.2480\t\tGO:0045291\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5240\tP\tWD-repeat protein\tLmjF27.2480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2500\tLmjF.27.2500\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5260\tC\thypothetical protein, conserved\tLmjF27.2500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2590\tLmjF.27.2590\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5270\tC\tdynein heavy chain, putative\tLmjF27.2590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.2590\tLmjF.27.2590\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5270\tC\tdynein heavy chain, putative\tLmjF27.2590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0020\tPOMP15\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb11.02.5105\tC\tPresent in the outer mitochondrial membrane proteome 15\tLmjF28.0020\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0030\tLmjF.28.0030\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7216\tC\tcell division cycle 6 (CDC6), putative\tLmjF28.0030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0030\tLmjF.28.0030\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7216\tC\tcell division cycle 6 (CDC6), 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0040\tLmjF.28.0040\t\tGO:0043631\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7218\tP\thypothetical protein, conserved\tLmjF28.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0040\tLmjF.28.0040\t\tGO:0048255\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7218\tP\thypothetical protein, conserved\tLmjF28.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0050\tDCR2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7240\tC\tComponent of motile flagella 70 protein, putative\tLmjF28.0050|CMF70\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0050\tDCR2\t\tGO:0005858\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7240\tC\tComponent of motile flagella 70 protein, putative\tLmjF28.0050|CMF70\tmRNA\ttaxon:347515\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0050\tDCR2\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7240\tC\tComponent of motile flagella 70 protein, putative\tLmjF28.0050|CMF70\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0050\tDCR2\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:LmxM.28.0050\tC\tComponent of motile flagella 70 protein, putative\tLmjF28.0050|CMF70\tmRNA\ttaxon:347515\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0050\tDCR2\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7240\tP\tComponent of motile flagella 70 protein, putative\tLmjF28.0050|CMF70\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0090\tHemAC\t\tGO:0005737\tPMID:24082109\tIDA\t\tC\toxygen-sensing adenylate cyclase\tLmjF28.0090\tmRNA\ttaxon:347515\t20131115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0090\tHemAC\t\tGO:0006171\tPMID:24082109\tIDA\t\tP\toxygen-sensing adenylate cyclase\tLmjF28.0090\tmRNA\ttaxon:347515\t20131115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0090\tHemAC\t\tGO:0019826\tPMID:24082109\tIDA\t\tF\toxygen-sensing adenylate 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"level": "WARNING", "line": "TriTrypDB\tLmjF.28.0090\tHemAC\t\tGO:0070483\tPMID:24082109\tIMP\t\tP\toxygen-sensing adenylate cyclase\tLmjF28.0090\tmRNA\ttaxon:347515\t20131115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0110\tLmjF.28.0110\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7270\tC\tproteasome beta 3 subunit, putative\tLmjF28.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0110\tLmjF.28.0110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7270\tC\tproteasome beta 3 subunit, putative\tLmjF28.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0120\tLmjF.28.0120\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7280\tC\tDNA-direcetd RNA polymerase II, subunit 9, putative\tLmjF28.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0120\tLmjF.28.0120\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7280\tC\tDNA-direcetd RNA polymerase II, subunit 9, putative\tLmjF28.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0140\tLmjF.28.0140\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7290\tC\tpantothenate kinase subunit, putative\tLmjF28.0140\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0140\tLmjF.28.0140\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7290\tC\tpantothenate kinase subunit, putative\tLmjF28.0140\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0160\tLmjF.28.0160\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7310\tC\tRNA binding protein, putative\tLmjF28.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0170\tLmjF.28.0170\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7320\tC\tdual specificity phopshatase, putative\tLmjF28.0170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0180\tLmjF.28.0180\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7330\tC\thypothetical protein, conserved\tLmjF28.0180\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0210\tH2BV\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7350\tC\tHistone H2B variant V\tLmjF28.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0210\tH2BV\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7350\tC\tHistone H2B variant V\tLmjF28.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0220\tLmjF.28.0220\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb11.02.5260\tP\tpalmitoyl acyltransferase 9, putative\tLmjF28.0220\tmRNA\ttaxon:347515\t20110725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0220\tLmjF.28.0220\t\tGO:0006897\tPMID:19240115\tISO\tGeneDB:Tb11.02.5260\tP\tpalmitoyl acyltransferase 9, putative\tLmjF28.0220\tmRNA\ttaxon:347515\t20110725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0220\tLmjF.28.0220\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 9, putative\tLmjF28.0220\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0220\tLmjF.28.0220\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb11.02.5260\tP\tpalmitoyl acyltransferase 9, putative\tLmjF28.0220\tmRNA\ttaxon:347515\t20110725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0240\tLmjF.28.0240\t\tGO:0004368\tPMID:16806528\tIDA\t\tF\tglycerol-3-phosphate dehydrogenase (FAD-dependent), mitochondrial\tLmjF28.0240\tmRNA\ttaxon:347515\t20170612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0240\tLmjF.28.0240\t\tGO:0005739\tPMID:16806528|GO_REF:0000024\tISO\tGeneDB:Tb927.11.7380\tC\tglycerol-3-phosphate dehydrogenase (FAD-dependent), mitochondrial\tLmjF28.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0240\tLmjF.28.0240\t\tGO:0019563\tPMID:16806528\tRCA\t\tP\tglycerol-3-phosphate dehydrogenase (FAD-dependent), mitochondrial\tLmjF28.0240\tmRNA\ttaxon:347515\t20090520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0240\tLmjF.28.0240\t\tGO:0050660\tPMID:16806528|GO_REF:0000024\tISO\tGeneDB:Tb927.11.7380\tF\tglycerol-3-phosphate dehydrogenase (FAD-dependent), mitochondrial\tLmjF28.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0270\tLmjF.28.0270\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7420\tC\tphosphoadenosine phosphosulfate reductase-like protein\tLmjF28.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0270\tLmjF.28.0270\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7420\tC\tphosphoadenosine phosphosulfate reductase-like protein\tLmjF28.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0270\tLmjF.28.0270\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7420\tC\tphosphoadenosine phosphosulfate reductase-like protein\tLmjF28.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0300\tLmjF.28.0300\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF28.0300\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0300\tLmjF.28.0300\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7450\tC\thypothetical protein, conserved\tLmjF28.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0330\tLmjF.28.0330\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb11.02.5380\tC\trrp44p homologue, putative\tLmjF28.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0340\tLmjF.28.0340\t\tGO:0000963\tGO_REF:0000024\tISO\tGeneDB:Tb11.02.5390\tP\thypothetical protein, conserved\tLmjF28.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0340\tLmjF.28.0340\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb11.02.5390\tF\thypothetical protein, conserved\tLmjF28.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0360\tLmjF.28.0360\t\tGO:0008641\tGO_REF:0000024\tISO\tGeneDB:Tb11.02.5410\tF\tubiquitin activating enzyme, putative\tLmjF28.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0360\tLmjF.28.0360\t\tGO:0019948\tGO_REF:0000024\tISO\tGeneDB:Tb11.02.5410\tF\tubiquitin activating enzyme, putative\tLmjF28.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0390\tNuSAP1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8370\tC\tNucleus and spindle associated protein 1, putative\tLmjF28.0390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0390\tNuSAP1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8370\tC\tNucleus and spindle associated protein 1, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0400\tLmjF.28.0400\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8350\tC\tkatanin, putative\tLmjF28.0400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0410\tLmjF.28.0410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8330\tC\thypothetical protein, conserved\tLmjF28.0410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0430\tLmjF.28.0430\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8310\tC\thypothetical protein, conserved\tLmjF28.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0430\tLmjF.28.0430\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8310\tC\thypothetical protein, conserved\tLmjF28.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0450\tLmjF.28.0450\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8290\tC\tDIS3-like exonuclease, putative\tLmjF28.0450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0460\tLmjF.28.0460\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8280\tC\thypothetical protein, conserved\tLmjF28.0460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0470\tLmjF.28.0470\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8270\tC\thypothetical protein, conserved\tLmjF28.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0510\tLmjF.28.0510\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8230\tC\thypothetical 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0520\tAIRK\t\tGO:0004674\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8220\tF\tAurora I-related kinase\tLmjF28.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0520\tAIRK\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8220\tC\tAurora I-related kinase\tLmjF28.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0520\tAIRK\t\tGO:0005819\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8220\tC\tAurora I-related kinase\tLmjF28.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0520\tAIRK\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8220\tP\tAurora I-related kinase\tLmjF28.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0520\tAIRK\t\tGO:0007088\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8220\tP\tAurora I-related kinase\tLmjF28.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0520\tAIRK\t\tGO:0032133\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8220\tC\tAurora I-related kinase\tLmjF28.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0520\tAIRK\t\tGO:0043987\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8220\tP\tAurora I-related kinase\tLmjF28.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0520\tAIRK\t\tGO:0051225\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8220\tP\tAurora I-related kinase\tLmjF28.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0530\tLmjF.28.0530\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8210\tC\tRAD50 DNA repair-like protein\tLmjF28.0530\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0540\tLmjF.28.0540\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8200\tF\tribosomal protein S26, putative\tLmjF28.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0000724\tGO_REF:0000002\tISA\tUniProtKB:RAD51_HUMAN\tP\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0003690\tPMID:11420107\tIDA\t\tF\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0003697\tPMID:11420107\tIDA\t\tF\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0005524\tGO_REF:0000002\tISS\tUniProtKB:RAD51_HUMAN|InterPro:IPR011941\tF\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20101118\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0005634\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.8190\tC\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20140305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0006281\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.8190\tP\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0006310\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.8190\tP\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0006974\tPMID:11420107\tIEP\t\tP\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0016887\tPMID:11420107\tIDA\t\tF\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0020012\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.8190\tP\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0033676\tPMID:11420107\tIDA\t\tF\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0035861\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.8190\tC\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20140305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0043142\tPMID:11420107\tIDA\t\tF\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130913\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0090592\tPMID:32609721\tIMP\t\tP\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20210215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0610\tLmjF.28.0610\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8160\tC\tdynein heavy chain, putative\tLmjF28.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0610\tLmjF.28.0610\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8160\tC\tdynein heavy chain, putative\tLmjF28.0610\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0620\tLmjF.28.0620\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8150\tC\tULK family pseudokinase, putative\tLmjF28.0620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0630\tLmjF.28.0630\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8140\tC\tER lumen retaining receptor-like protein\tLmjF28.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0640\tLmjF.28.0640\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8130\tC\tATP synthase subunit H, putative\tLmjF28.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0640\tLmjF.28.0640\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8130\tC\tATP synthase subunit H, putative\tLmjF28.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0640\tLmjF.28.0640\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8130\tP\tATP synthase subunit H, putative\tLmjF28.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0650\tLmjF.28.0650\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8120\tC\tprotein transport protein SEC13, putative\tLmjF28.0650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0660\tLmjF.28.0660\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8110\tC\thypothetical protein, conserved\tLmjF28.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0660\tLmjF.28.0660\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8110\tC\thypothetical protein, conserved\tLmjF28.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0690\tLmjF.28.0690\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8090\tC\tserine/threonine protein phosphatase catalytic subunit, putative\tLmjF28.0690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0690\tLmjF.28.0690\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8090\tC\tserine/threonine protein phosphatase catalytic subunit, putative\tLmjF28.0690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0700\tLmjF.28.0700\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8080\tC\tbtb/poz domain containing protein, putative\tLmjF28.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0700\tLmjF.28.0700\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8080\tC\tbtb/poz domain containing protein, putative\tLmjF28.0700\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0700\tLmjF.28.0700\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8080\tC\tbtb/poz domain containing protein, putative\tLmjF28.0700\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0710\tLmjF.28.0710\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8060\tC\tSNARE associated Golgi protein, putative\tLmjF28.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0710\tLmjF.28.0710\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8060\tC\tSNARE associated Golgi protein, putative\tLmjF28.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0720\tLmjF.28.0720\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8050\tC\tSas10/Utp3/C1D family/Sas10 C-terminal domain containing protein, putative\tLmjF28.0720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0730\tLmjF.28.0730\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8040\tC\thypothetical protein, conserved\tLmjF28.0730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0740\tLmjF.28.0740\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8030\tC\thypothetical protein, conserved\tLmjF28.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0750\tLmjF.28.0750\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8020\tP\thypothetical protein, conserved\tLmjF28.0750\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0780\tKPAP1\t\tGO:0004652\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7960\tF\tkinetoplast poly(A) polymerase 1\tLmjF28.0780|TUT5\tmRNA\ttaxon:347515\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0780\tKPAP1\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7960\tC\tkinetoplast poly(A) polymerase 1\tLmjF28.0780|TUT5\tmRNA\ttaxon:347515\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0780\tKPAP1\t\tGO:0006378\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7960\tP\tkinetoplast poly(A) polymerase 1\tLmjF28.0780|TUT5\tmRNA\ttaxon:347515\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0790\tLmjF.28.0790\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7950\tC\tkinetoplastid-specific dual specificity phosphatase, putative\tLmjF28.0790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0800\tLmjF.28.0800\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7940\tC\tcalmodulin-like protein\tLmjF28.0800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0810\tLmjF.28.0810\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7930\tC\tRNA polymerase B subunit RPB8, putative\tLmjF28.0810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0820\tLmjF.28.0820\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7920\tC\thypothetical protein, conserved\tLmjF28.0820\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0825\tLmjF.28.0825\t\tGO:0003723\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7900\tF\tRNA binding protein rbp16, putative\tLmjF28.0825\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0825\tLmjF.28.0825\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7900\tC\tRNA binding protein rbp16, putative\tLmjF28.0825\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0825\tLmjF.28.0825\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7900\tC\tRNA binding protein rbp16, putative\tLmjF28.0825\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0825\tLmjF.28.0825\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7900\tC\tRNA binding protein rbp16, putative\tLmjF28.0825\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0825\tLmjF.28.0825\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7900\tP\tRNA binding protein rbp16, putative\tLmjF28.0825\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0830\tLmjF.28.0830\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF28.0830\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0830\tLmjF.28.0830\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7890\tC\thypothetical protein, conserved\tLmjF28.0830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0830\tLmjF.28.0830\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7890\tP\thypothetical protein, conserved\tLmjF28.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0850\tLmjF.28.0850\t\tGO:0003677\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7860\tF\tDNA replication licensing factor MCM2, putative\tLmjF28.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0850\tLmjF.28.0850\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7860\tC\tDNA replication licensing factor MCM2, putative\tLmjF28.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0850\tLmjF.28.0850\t\tGO:0006270\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7860\tP\tDNA replication licensing factor MCM2, putative\tLmjF28.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0850\tLmjF.28.0850\t\tGO:0044786\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7860\tP\tDNA replication licensing factor MCM2, putative\tLmjF28.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0850\tLmjF.28.0850\t\tGO:0071162\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7860\tC\tDNA replication licensing factor MCM2, putative\tLmjF28.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0880\tLmjF.28.0880\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7850\tC\thypothetical protein, conserved\tLmjF28.0880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0880\tLmjF.28.0880\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7850\tC\thypothetical protein, conserved\tLmjF28.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0890\tLmjF.28.0890\t\tGO:0004748\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7840\tF\tribonucleoside-diphosphate reductase large chain, putative\tLmjF28.0890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0890\tLmjF.28.0890\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7840\tC\tribonucleoside-diphosphate reductase large chain, putative\tLmjF28.0890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0900\tLmjF.28.0900\t\tGO:0097542\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7830\tC\thypothetical protein, conserved\tLmjF28.0900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0910\tLmjF.28.0910\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7820\tC\tendonuclease/exonuclease/phosphatase-like protein\tLmjF28.0910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0910\tLmjF.28.0910\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7820\tC\tendonuclease/exonuclease/phosphatase-like protein\tLmjF28.0910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0920\tLmjF.28.0920\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7790\tC\thypothetical protein, conserved\tLmjF28.0920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0920\tLmjF.28.0920\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7790\tC\thypothetical protein, conserved\tLmjF28.0920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0930\tATOM46\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7780\tC\tPresent in the outer mitochondrial membrane proteome 16\tLmjF28.0930|POMP16\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0930\tATOM46\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7780\tC\tPresent in the outer mitochondrial membrane proteome 16\tLmjF28.0930|POMP16\tmRNA\ttaxon:347515\t20150903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0930\tATOM46\t\tGO:0005742\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7780|GeneDB:Tb927.9.9660\tC\tPresent in the outer mitochondrial membrane proteome 16\tLmjF28.0930|POMP16\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0930\tATOM46\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7780\tP\tPresent in the outer mitochondrial membrane proteome 16\tLmjF28.0930|POMP16\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0930\tATOM46\t\tGO:0030150\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7780\tP\tPresent in the outer mitochondrial membrane proteome 16\tLmjF28.0930|POMP16\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0940\tLmjF.28.0940\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7770\tC\toxidoreductase-like protein\tLmjF28.0940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0940\tLmjF.28.0940\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7770\tC\toxidoreductase-like protein\tLmjF28.0940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0980\tP27\t\tGO:0002082\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tP\tP27 protein, putative\tLmjF28.0980\tmRNA\ttaxon:347515\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0980\tP27\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7700\tC\tP27 protein, putative\tLmjF28.0980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0980\tP27\t\tGO:0005743\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tC\tP27 protein, putative\tLmjF28.0980\tmRNA\ttaxon:347515\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0980\tP27\t\tGO:0070069\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tC\tP27 protein, putative\tLmjF28.0980\tmRNA\ttaxon:347515\t20100614\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1000\tLmjF.28.1000\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7690\tC\thypothetical protein, conserved\tLmjF28.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1000\tLmjF.28.1000\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7690\tC\thypothetical protein, conserved\tLmjF28.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1020\tLmjF.28.1020\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7680\tC\thypothetical protein, conserved\tLmjF28.1020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1080\tLmjF.28.1080\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7580\tC\thypothetical protein, conserved\tLmjF28.1080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1080\tLmjF.28.1080\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7580\tC\thypothetical protein, conserved\tLmjF28.1080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1090\tLmjF.28.1090\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7570\tC\tATP-grasp domain containing protein, putative\tLmjF28.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1090\tLmjF.28.1090\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7570\tC\tATP-grasp domain containing protein, putative\tLmjF28.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1110\tLmjF.28.1110\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7560\tC\tWD domain, G-beta repeat, putative\tLmjF28.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1110\tLmjF.28.1110\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7560\tC\tWD domain, G-beta repeat, putative\tLmjF28.1110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1140\tLmjF.28.1140\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7540\tC\telectron-transfer-flavoprotein, alpha polypeptide, putative\tLmjF28.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1140\tLmjF.28.1140\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7540\tC\telectron-transfer-flavoprotein, alpha polypeptide, putative\tLmjF28.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1150\tLmjF.28.1150\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7530\tC\tlong-chain-fatty-acid-CoA ligase, putative\tLmjF28.1150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1160\tLmjF.28.1160\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7480\tC\tvacuolar type h+ ATPase subunit, putative\tLmjF28.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1160\tLmjF.28.1160\t\tGO:0035690\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7480\tP\tvacuolar type h+ ATPase subunit, putative\tLmjF28.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1200\tBiP\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7460\tC\tglucose-regulated protein 78, putative\tGRP78A|LmjF28.1200\tmRNA\ttaxon:347515\t20141203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1240\tLmjF.28.1240\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8380\tC\tp450 reductase, putative\tLmjF28.1240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1260\tLmjF.28.1260\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8410\tC\thypothetical protein, conserved\tLmjF28.1260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1270\tJ55\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8420\tC\tDnaJ domain containing protein, putative\tLmjF28.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1280\tPAH\t\tGO:0004505\tPMID:20887755\tIMP\t\tF\tphenylalanine-4-hydroxylase\tLmjF28.1280\tmRNA\ttaxon:347515\t20101014\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1280\tPAH\t\tGO:0006558\tPMID:20887755\tIMP\t\tP\tphenylalanine-4-hydroxylase\tLmjF28.1280\tmRNA\ttaxon:347515\t20101014\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1310\tLmjF.28.1310\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4270\tC\tATP-dependent RNA helicase, putative\tLmjF28.1310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1310\tLmjF.28.1310\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4270\tC\tATP-dependent RNA helicase, putative\tLmjF28.1310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1390\tLmjF.28.1390\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8450\tC\tAmastin surface glycoprotein, putative\tLmjF28.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1405\tLmjF.28.1405\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein\tLmjF28.1405\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1405\tLmjF.28.1405\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8470\tP\thypothetical protein\tLmjF28.1405\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1470\tLmjF.28.1470\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8790\tC\tQa-SNARE protein\tLmjF28.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1480\tLmjF.28.1480\t\tGO:0005737\tPMID:17026746|GO_REF:0000024\tISO\tGeneDB:Tb927.11.8790\tC\tQa-SNARE protein\tLmjF28.1480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1490\tLmjF.28.1490\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8740\tC\tProtein of unknown function (DUF423), putative\tLmjF28.1490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1500\tLmjF.28.1500\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8740\tC\tProtein of unknown function (DUF423), putative\tLmjF28.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1510\tLmjF.28.1510\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8740\tC\tProtein of unknown function (DUF423), putative\tLmjF28.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1530\tLmjF.28.1530\t\tGO:0000462\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.8770\tP\tATP-dependent RNA helicase FAL1, putative\tLmjF28.1530\tmRNA\ttaxon:347515\t20120815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1530\tLmjF.28.1530\t\tGO:0004386\tPMID:15694484\tISA\tEMBL:Q04637\tF\tATP-dependent RNA helicase FAL1, putative\tLmjF28.1530\tmRNA\ttaxon:347515\t20100329\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1530\tLmjF.28.1530\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8770\tC\tATP-dependent RNA helicase FAL1, putative\tLmjF28.1530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1530\tLmjF.28.1530\t\tGO:0005730\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.8770\tC\tATP-dependent RNA helicase FAL1, putative\tLmjF28.1530\tmRNA\ttaxon:347515\t20120815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1530\tLmjF.28.1530\t\tGO:0005829\tPMID:15694484\tISA\tEMBL:Q04637\tC\tATP-dependent RNA helicase FAL1, putative\tLmjF28.1530\tmRNA\ttaxon:347515\t20100329\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1530\tLmjF.28.1530\t\tGO:0006412\tPMID:15694484\tISA\tEMBL:Q04637\tP\tATP-dependent RNA helicase FAL1, putative\tLmjF28.1530\tmRNA\ttaxon:347515\t20100329\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1530\tLmjF.28.1530\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8770\tC\tATP-dependent RNA helicase FAL1, putative\tLmjF28.1530\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1530\tLmjF.28.1530\t\tGO:0055086\tPMID:15694484\tISA\tEMBL:Q04637\tP\tATP-dependent RNA helicase FAL1, putative\tLmjF28.1530\tmRNA\ttaxon:347515\t20100329\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1550\tLmjF.28.1550\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8800\tC\thypothetical protein, conserved\tLmjF28.1550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1590\tLmjF.28.1590\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9340\tC\tGalactose oxidase, central domain containing protein, putative\tLmjF28.1590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1590\tLmjF.28.1590\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9340\tC\tGalactose oxidase, central domain containing protein, putative\tLmjF28.1590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1610\tLmjF.28.1610\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9320\tC\thypothetical protein, conserved\tLmjF28.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1630\tLmjF.28.1630\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9300\tC\tDomain of unknown function (DUF3342), putative\tLmjF28.1630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1650\tFAZ20\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9290\tC\tFlagellum attachment zone protein 20\tLmjF28.1650\tmRNA\ttaxon:347515\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1650\tFAZ20\t\tGO:0051286\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9290\tC\tFlagellum attachment zone protein 20\tLmjF28.1650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1660\tLmjF.28.1660\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9280\tC\thypothetical protein, conserved\tLmjF28.1660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1660\tLmjF.28.1660\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9280\tC\thypothetical protein, conserved\tLmjF28.1660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1670\tZFK\t\tGO:0005737\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.9270\tC\tzinc finger protein kinase, putative\tLmjF28.1670\tmRNA\ttaxon:347515\t20140106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1670\tZFK\t\tGO:0016301\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.9270\tF\tzinc finger protein kinase, putative\tLmjF28.1670\tmRNA\ttaxon:347515\t20140106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1670\tZFK\t\tGO:0044131\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.9270\tP\tzinc finger protein kinase, putative\tLmjF28.1670\tmRNA\ttaxon:347515\t20140106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1670\tZFK\t\tGO:0045926\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.9270\tP\tzinc finger protein kinase, putative\tLmjF28.1670\tmRNA\ttaxon:347515\t20140106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1670\tZFK\t\tGO:2000134\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.9270\tP\tzinc finger protein kinase, putative\tLmjF28.1670\tmRNA\ttaxon:347515\t20140106\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1700\tLmjF.28.1700\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9260\tC\thypothetical protein, conserved\tLmjF28.1700\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1720\tLmjF.28.1720\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9230\tC\thypothetical protein, conserved\tLmjF28.1720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1730\tLmjF.28.1730\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9220\tC\tproteasome regulatory non-ATP-ase subunit 2, putative\tLmjF28.1730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1740\tLmjF.28.1740\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9210\tC\tNOL1/NOP2/sun family, putative\tLmjF28.1740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1740\tLmjF.28.1740\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9210\tC\tNOL1/NOP2/sun family, putative\tLmjF28.1740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1740\tLmjF.28.1740\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9210\tC\tNOL1/NOP2/sun family, putative\tLmjF28.1740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1760\tLmjF.28.1760\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9190\tC\tSerine/threonine-protein kinase VPS15, putative\tLmjF28.1760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1780\tLmjF.28.1780\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9170\tC\tDNA topoisomerase III, putative\tLmjF28.1780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1810\tLmjF.28.1810\t\tGO:0003723\tPMID:22396527\tISO\tGeneDB:Tb927.11.9140\tF\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF28.1810\tmRNA\ttaxon:347515\t20120911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1810\tLmjF.28.1810\t\tGO:0016554\tPMID:22396527\tISO\tGeneDB:Tb927.11.9140\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF28.1810\tmRNA\ttaxon:347515\t20120911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1810\tLmjF.28.1810\t\tGO:0048255\tPMID:22396527\tISO\tGeneDB:Tb927.11.9140\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF28.1810\tmRNA\ttaxon:347515\t20120911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1820\tRPA1\t\tGO:0000784\tGO_REF:0000024\tISO\tUniProtKB:Q5MY89\tC\tReplication factor A protein 1\tLmjF28.1820\tmRNA\ttaxon:347515\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1820\tRPA1\t\tGO:0003684\tPMID:24118609\tIDA\t\tF\tReplication factor A protein 1\tLmjF28.1820\tmRNA\ttaxon:347515\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1820\tRPA1\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9130\tC\tReplication factor A protein 1\tLmjF28.1820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1820\tRPA1\t\tGO:0006974\tPMID:24118609\tIMP\t\tP\tReplication factor A protein 1\tLmjF28.1820\tmRNA\ttaxon:347515\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1820\tRPA1\t\tGO:0006974\tGO_REF:0000024\tISO\tUniProtKB:Q5MY89\tP\tReplication factor A protein 1\tLmjF28.1820\tmRNA\ttaxon:347515\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1820\tRPA1\t\tGO:0034399\tPMID:24118609\tIDA\t\tC\tReplication factor A protein 1\tLmjF28.1820\tmRNA\ttaxon:347515\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1840\tLmjF.28.1840\t\tGO:0005829\tPMID:18364711\tRCA\t\tC\tmethylthioribulose-1-phosphate dehydratase, putative\tLmjF28.1840\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1840\tLmjF.28.1840\t\tGO:0046570\tPMID:18364711\tRCA\t\tF\tmethylthioribulose-1-phosphate dehydratase, putative\tLmjF28.1840\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1850\tLmjF.28.1850\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9110\tC\tC-terminal motor kinesin, putative\tLmjF28.1850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1850\tLmjF.28.1850\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9110\tC\tC-terminal motor kinesin, putative\tLmjF28.1850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1850\tLmjF.28.1850\t\tGO:0005871\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9110\tC\tC-terminal motor kinesin, putative\tLmjF28.1850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1860\tLmjF.28.1860\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9100\tP\tDomain of unknown function (DUF4586), putative\tLmjF28.1860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1870\tLmjF.28.1870\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9090\tC\tPutative methyltransferase, putative\tLmjF28.1870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1880\tNOP136\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9080\tC\tNucleolar protein 136, putative\tLmjF28.1880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1880\tNOP136\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9080\tC\tNucleolar protein 136, putative\tLmjF28.1880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1890\tLmjF.28.1890\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb11.01.0810\tP\tpalmitoyl acyltransferase 4, putative\tLmjF28.1890\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1890\tLmjF.28.1890\t\tGO:0006897\tPMID:19240115\tISO\tGeneDB:Tb11.01.0810\tP\tpalmitoyl acyltransferase 4, putative\tLmjF28.1890\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1890\tLmjF.28.1890\t\tGO:0016021\tPMID:11152613\tISO\tGeneDB:Tb11.01.0810\tC\tpalmitoyl acyltransferase 4, putative\tLmjF28.1890\tmRNA\ttaxon:347515\t20110713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1890\tLmjF.28.1890\t\tGO:0016746\tPMID:19240115\tISO\tGeneDB:Tb11.01.0810\tF\tpalmitoyl acyltransferase 4, putative\tLmjF28.1890\tmRNA\ttaxon:347515\t20110713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1890\tLmjF.28.1890\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb11.01.0810\tP\tpalmitoyl acyltransferase 4, putative\tLmjF28.1890\tmRNA\ttaxon:347515\t20110713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1910\tLmjF.28.1910\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9050\tC\tp21-C-terminal region-binding protein, putative\tLmjF28.1910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1910\tLmjF.28.1910\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9050\tC\tp21-C-terminal region-binding protein, putative\tLmjF28.1910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1930\tZIP3\t\tGO:0005385\tGO_REF:0000024\tISO\tGeneDB:LinJ.28.2050\tF\tZinc transporter 3, putative\tLmjF28.1930\tmRNA\ttaxon:347515\t20150217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1930\tZIP3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9020\tC\tZinc transporter 3, putative\tLmjF28.1930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1930\tZIP3\t\tGO:0005886\tGO_REF:0000024\tISO\tGeneDB:LinJ.28.2050\tC\tZinc transporter 3, putative\tLmjF28.1930\tmRNA\ttaxon:347515\t20150217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1930\tZIP3\t\tGO:0006882\tGO_REF:0000024\tISO\tGeneDB:LinJ.28.2050\tP\tZinc transporter 3, putative\tLmjF28.1930\tmRNA\ttaxon:347515\t20150217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1970\tLmjF.28.1970\t\tGO:0004751\tPMID:16981853\tISO\tGeneDB:TcCLB.509199.24\tF\tribose 5-phosphate isomerase, putative\tLmjF28.1970\tmRNA\ttaxon:347515\t20120720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1970\tLmjF.28.1970\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8970\tC\tribose 5-phosphate isomerase, putative\tLmjF28.1970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1970\tLmjF.28.1970\t\tGO:0006098\tPMID:16981853\tISO\tGeneDB:TcCLB.509199.24\tP\tribose 5-phosphate isomerase, putative\tLmjF28.1970\tmRNA\ttaxon:347515\t20120720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1970\tLmjF.28.1970\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8970\tC\tribose 5-phosphate isomerase, putative\tLmjF28.1970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1980\tLmjF.28.1980\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8960\tC\thypothetical protein, conserved\tLmjF28.1980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2000\tLDK\t\tGO:0004674\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8940\tF\tprotein lipid droplet kinase (LDK)\tLmjF28.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2000\tLDK\t\tGO:0005811\tPMID:20833891|GO_REF:0000024\tISO\tGeneDB:Tb927.11.8940|GeneDB:Tb11.01.0670\tC\tprotein lipid droplet kinase (LDK)\tLmjF28.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2000\tLDK\t\tGO:0006468\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8940\tP\tprotein lipid droplet kinase (LDK)\tLmjF28.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2000\tLDK\t\tGO:0016021\tPMID:20833891|GO_REF:0000024\tISO\tGeneDB:Tb927.11.8940|GeneDB:Tb11.01.0670\tC\tprotein lipid droplet kinase (LDK)\tLmjF28.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2000\tLDK\t\tGO:0034389\tPMID:20833891|GO_REF:0000024\tISO\tGeneDB:Tb927.11.8940|GeneDB:Tb11.01.0670\tP\tprotein lipid droplet kinase (LDK)\tLmjF28.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2000\tLDK\t\tGO:0046777\tPMID:20833891|GO_REF:0000024\tISO\tGeneDB:Tb927.11.8940|GeneDB:Tb11.01.0670\tP\tprotein lipid droplet kinase (LDK)\tLmjF28.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2000\tLDK\t\tGO:0055088\tPMID:20833891|GO_REF:0000024\tISO\tGeneDB:Tb927.11.8940|GeneDB:Tb11.01.0670\tP\tprotein lipid droplet kinase (LDK)\tLmjF28.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2010\tLmjF.28.2010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8930\tC\thypothetical protein, conserved\tLmjF28.2010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2020\tLmjF.28.2020\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8920\tC\thypothetical protein, conserved\tLmjF28.2020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0003954\tPMID:18534909\tISS\t\tF\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tC\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8910\tC\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0005747\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tC\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0006735\tPMID:18534909\tISS\t\tP\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0008137\tPMID:18534909\tISS\t\tF\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0030308\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tP\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0030964\tPMID:18534909|GO_REF:0000024\tISO\tGeneDB:Tb927.11.8910\tC\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0031966\tPMID:18534909\tISS\t\tC\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0045039\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tP\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0072593\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tP\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0097190\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tP\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2040\tLmjF.28.2040\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8900\tC\tDPCD protein family, putative\tLmjF28.2040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2060\tLmjF.28.2060\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8890\tC\tDNA-directed RNA polymerase-like protein\tLmjF28.2060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2060\tLmjF.28.2060\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8890\tC\tDNA-directed RNA polymerase-like protein\tLmjF28.2060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2070\tLmjF.28.2070\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8880\tC\ttRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family, putative\tLmjF28.2070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2070\tLmjF.28.2070\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8880\tC\ttRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family, putative\tLmjF28.2070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2070\tLmjF.28.2070\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8880\tC\ttRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family, putative\tLmjF28.2070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2080\tMHEL61\t\tGO:0003724\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8870\tF\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tLmjF28.2080|KREH1\tmRNA\ttaxon:347515\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2080\tMHEL61\t\tGO:0004004\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8870\tF\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tLmjF28.2080|KREH1\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2080\tMHEL61\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8870\tF\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tLmjF28.2080|KREH1\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2080\tMHEL61\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8870\tC\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tLmjF28.2080|KREH1\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2080\tMHEL61\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8870\tC\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tLmjF28.2080|KREH1\tmRNA\ttaxon:347515\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2080\tMHEL61\t\tGO:0016556\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8870\tP\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tLmjF28.2080|KREH1\tmRNA\ttaxon:347515\t20141204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2080\tMHEL61\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8870\tC\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tLmjF28.2080|KREH1\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2090\tLmjF.28.2090\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.8860\tC\tCEP76 C2 domain containing protein, putative\tLmjF28.2090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2095\tLmjF.28.2095\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8850\tC\tUncharacterised protein family (UPF0220), putative\tLmjF28.2095\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2095\tLmjF.28.2095\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8850\tC\tUncharacterised protein family (UPF0220), putative\tLmjF28.2095\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2095\tLmjF.28.2095\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8850\tC\tUncharacterised protein family (UPF0220), putative\tLmjF28.2095\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2170\tATOM69\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9660|GeneDB:Tb927.11.11460\tC\tPresent in the outer mitochondrial membrane proteome 9\tLmjF28.2170|POMP9\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2170\tATOM69\t\tGO:0005742\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9660|GeneDB:Tb927.11.11460\tC\tPresent in the outer mitochondrial membrane proteome 9\tLmjF28.2170|POMP9\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2170\tATOM69\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11460\tP\tPresent in the outer mitochondrial membrane proteome 9\tLmjF28.2170|POMP9\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2170\tATOM69\t\tGO:0030150\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11460\tP\tPresent in the outer mitochondrial membrane proteome 9\tLmjF28.2170|POMP9\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2180\tLmjF.28.2180\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11470\tC\thypothetical protein, conserved\tLmjF28.2180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2180\tLmjF.28.2180\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11470\tP\thypothetical protein, conserved\tLmjF28.2180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2180\tLmjF.28.2180\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11470\tP\thypothetical protein, conserved\tLmjF28.2180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2210\tLmjF.28.2210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11480\tC\tglycoprotein 96-92, putative\tLmjF28.2210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2210\tLmjF.28.2210\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11480\tP\tglycoprotein 96-92, putative\tLmjF28.2210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2210\tLmjF.28.2210\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11480\tP\tglycoprotein 96-92, putative\tLmjF28.2210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2240\tLmjF.28.2240\t\tGO:0003824\tGO_REF:0000002\tISM\tInterPro:IPR009218\tF\thd phosphohydrolase family protein\tLmjF28.2240\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2260\tLmjF.28.2260\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11520\tC\tglycosomal membrane protein, putative\tLmjF28.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2260\tLmjF.28.2260\t\tGO:0016559\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11520\tP\tglycosomal membrane protein, putative\tLmjF28.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2260\tLmjF.28.2260\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11520\tC\tglycosomal membrane protein, putative\tLmjF28.2260\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2260\tLmjF.28.2260\t\tGO:0046860\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11520\tC\tglycosomal membrane protein, putative\tLmjF28.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2270\tLmjF.28.2270\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11530\tC\thistone acetyltransferase, putative\tLmjF28.2270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2270\tLmjF.28.2270\t\tGO:0010485\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11530\tF\thistone acetyltransferase, putative\tLmjF28.2270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2270\tLmjF.28.2270\t\tGO:0016573\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11530\tP\thistone acetyltransferase, putative\tLmjF28.2270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2280\tLmjF.28.2280\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11540\tC\tDNA topoisomerase ii\tLmjF28.2280\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2310\tEIF3E\t\tGO:0003743\tGO_REF:0000012\tISA\tUniProtKB:P60228\tF\tEukaryotic translation initiation factor 3 subunit E\tLmjF28.2310\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2310\tEIF3E\t\tGO:0005515\tPMID:25539953\tIPI\tGeneDB:LmjF.24.1210\tF\tEukaryotic translation initiation factor 3 subunit E\tLmjF28.2310\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2310\tEIF3E\t\tGO:0005737\tPMID:25539953\tIDA\t\tC\tEukaryotic translation initiation factor 3 subunit E\tLmjF28.2310\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2310\tEIF3E\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11590\tC\tEukaryotic translation initiation factor 3 subunit E\tLmjF28.2310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2310\tEIF3E\t\tGO:0005852\tPMID:25539953\tIPI\tGeneDB:LmjF.17.0010|GeneDB:LmjF.17.1290|GeneDB:LmjF.36.6980|GeneDB:LmjF.30.3040|GeneDB:LmjF.25.1610|GeneDB:LmjF.34.2700|GeneDB:LmjF.07.0640|GeneDB:LmjF.36.3880|GeneDB:LmjF.25.2120|GeneDB:LmjF.32.2180|GeneDB:LmjF.36.0250\tC\tEukaryotic translation initiation factor 3 subunit E\tLmjF28.2310\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2310\tEIF3E\t\tGO:0006413\tGO_REF:0000012\tISA\tUniProtKB:P60228\tP\tEukaryotic translation initiation factor 3 subunit E\tLmjF28.2310\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2330\tLmjF.28.2330\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11610\tC\tCactus-binding C-terminus of cactin protein, putative\tLmjF28.2330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2385\tLmjF.28.2385\t\tGO:0003677\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11640\tF\tDNA replication licensing factor MCM6, putative\tLmjF28.2385\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2385\tLmjF.28.2385\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11640\tC\tDNA replication licensing factor MCM6, putative\tLmjF28.2385\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2385\tLmjF.28.2385\t\tGO:0006270\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11640\tP\tDNA replication licensing factor MCM6, putative\tLmjF28.2385\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2385\tLmjF.28.2385\t\tGO:0042555\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11640\tC\tDNA replication licensing factor MCM6, putative\tLmjF28.2385\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2385\tLmjF.28.2385\t\tGO:0044786\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11640\tP\tDNA replication licensing factor MCM6, putative\tLmjF28.2385\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2385\tLmjF.28.2385\t\tGO:0071162\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11640\tC\tDNA replication licensing factor MCM6, putative\tLmjF28.2385\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2390\tLmjF.28.2390\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11650\tC\tWW domain containing protein, putative\tLmjF28.2390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2410\trft1\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11670\tC\tdolichyl-lipid chaperone, putative\tLmjF28.2410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2410\trft1\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11670\tC\tdolichyl-lipid chaperone, putative\tLmjF28.2410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2410\trft1\t\tGO:0005789\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.11670\tC\tdolichyl-lipid chaperone, putative\tLmjF28.2410\tmRNA\ttaxon:347515\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2410\trft1\t\tGO:0006488\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.11670\tP\tdolichyl-lipid chaperone, putative\tLmjF28.2410\tmRNA\ttaxon:347515\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2410\trft1\tNOT\tGO:0034202\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.11670\tF\tdolichyl-lipid chaperone, putative\tLmjF28.2410\tmRNA\ttaxon:347515\t20140423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2420\tLmjF.28.2420\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11680\tC\t2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase, putative\tLmjF28.2420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2420\tLmjF.28.2420\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11680\tC\t2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase, putative\tLmjF28.2420\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2430\tLmjF.28.2430\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506025.50\tC\tVacuolar proton pump subunit B, putative\tLmjF28.2430\tmRNA\ttaxon:347515\t20120112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2430\tLmjF.28.2430\t\tGO:0020022\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11690\tC\tVacuolar proton pump subunit B, putative\tLmjF28.2430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2430\tLmjF.28.2430\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11690\tP\tVacuolar proton pump subunit B, putative\tLmjF28.2430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2440\tLmjF.28.2440\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11700\tC\thypothetical protein, conserved\tLmjF28.2440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2500\tEIF4E3\t\tGO:0000339\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11770\tF\tEukaryotic translation initiation factor 4E-3\tLmjF28.2500\tmRNA\ttaxon:347515\t20101102\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2500\tEIF4E3\t\tGO:0000340\tPMID:17041189\tIDA\t\tF\tEukaryotic translation initiation factor 4E-3\tLmjF28.2500\tmRNA\ttaxon:347515\t20160127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2500\tEIF4E3\tNOT\tGO:0000342\tPMID:17041189\tIDA\t\tF\tEukaryotic translation initiation factor 4E-3\tLmjF28.2500\tmRNA\ttaxon:347515\t20160127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2500\tEIF4E3\t\tGO:0003723\tGO_REF:0000012\tISA\tUniProtKB:Q04637\tF\tEukaryotic translation initiation factor 4E-3\tLmjF28.2500\tmRNA\ttaxon:347515\t20100326\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2500\tEIF4E3\t\tGO:0003743\tGO_REF:0000012\tISA\tUniProtKB:Q04637\tF\tEukaryotic translation initiation factor 4E-3\tLmjF28.2500\tmRNA\ttaxon:347515\t20100326\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2500\tEIF4E3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11770\tC\tEukaryotic translation initiation factor 4E-3\tLmjF28.2500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2500\tEIF4E3\t\tGO:0006413\tGO_REF:0000012\tISA\tUniProtKB:Q04637\tP\tEukaryotic translation initiation factor 4E-3\tLmjF28.2500\tmRNA\ttaxon:347515\t20100326\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2500\tEIF4E3\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11770\tC\tEukaryotic translation initiation factor 4E-3\tLmjF28.2500\tmRNA\ttaxon:347515\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2500\tEIF4E3\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11770\tP\tEukaryotic translation initiation factor 4E-3\tLmjF28.2500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2510\tLmjF.28.2510\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11780\tC\tacyl-CoA dehydrogenase, putative\tLmjF28.2510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2520\tLmjF.28.2520\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11790\tF\tR3H domain containing protein, putative\tLmjF28.2520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2520\tLmjF.28.2520\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11790\tC\tR3H domain containing protein, putative\tLmjF28.2520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2530\tLmjF.28.2530\t\tGO:0000287\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.11.11800|GeneDB:Tb11.01.3660\tF\tDNA repair and recombination helicase protein PIF3, putative\tLmjF28.2530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2530\tLmjF.28.2530\t\tGO:0000723\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF3, putative\tLmjF28.2530\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2530\tLmjF.28.2530\t\tGO:0004003\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.11.11800|GeneDB:Tb11.01.3660\tF\tDNA repair and recombination helicase protein PIF3, putative\tLmjF28.2530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2530\tLmjF.28.2530\t\tGO:0005524\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.11.11800|GeneDB:Tb11.01.3660\tF\tDNA repair and recombination helicase protein PIF3, putative\tLmjF28.2530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2530\tLmjF.28.2530\t\tGO:0005737\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.11.11800|GeneDB:Tb11.01.3660\tC\tDNA repair and recombination helicase protein PIF3, putative\tLmjF28.2530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2530\tLmjF.28.2530\t\tGO:0006310\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF3, putative\tLmjF28.2530\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2530\tLmjF.28.2530\t\tGO:0051276\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF3, putative\tLmjF28.2530\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2620\tCOPG\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11900\tC\tCoatomer subunit gamma\tLmjF28.2620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2620\tCOPG\t\tGO:0030126\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11900\tC\tCoatomer subunit gamma\tLmjF28.2620\tmRNA\ttaxon:347515\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2710\tLmjF.28.2710\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11390\tC\thypothetical protein, conserved\tLmjF28.2710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2710\tLmjF.28.2710\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11390\tC\thypothetical protein, conserved\tLmjF28.2710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2730\tLmjF.28.2730\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11380\tC\thypothetical 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2750\tRACK1\t\tGO:0032465\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.11360\tP\treceptor for activated C kinase 1\tLmjF28.2750|LACK2\tmRNA\ttaxon:347515\t20090814\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2760\tGCP3\t\tGO:0000930\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11340\tC\tgamma-tubulin complex component 3\tLmjF28.2760\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2760\tGCP3\tNOT\tGO:0007052\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11340\tP\tgamma-tubulin complex component 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2760\tGCP3\tNOT\tGO:0043622\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11340\tP\tgamma-tubulin complex component 3\tLmjF28.2760\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2760\tGCP3\t\tGO:1904158\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11340\tP\tgamma-tubulin complex component 3\tLmjF28.2760\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2770\tHSP70\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11330\tC\theat-shock protein hsp70, putative\tLmjF28.2770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2780\tLmjF.28.2780\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11330\tC\theat-shock protein hsp70, putative\tLmjF28.2780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2810\tLmjF.28.2810\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11300\tC\thypothetical protein, conserved\tLmjF28.2810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2820\tHSP70.c\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11290\tC\theat shock protein 70, putative\tLmjF28.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2820\tHSP70.c\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11290\tC\theat shock protein 70, putative\tLmjF28.2820\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2860\tcMDH\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11250\tC\tcytosolic malate dehydrogenase\tLmjF28.2860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2860\tcMDH\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11250\tC\tcytosolic malate dehydrogenase\tLmjF28.2860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2860\tcMDH\t\tGO:0005829\tPMID:16750864|GO_REF:0000024\tISO\tGeneDB:Tb927.11.11250\tC\tcytosolic malate dehydrogenase\tLmjF28.2860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2860\tcMDH\t\tGO:0006108\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11250\tP\tcytosolic malate dehydrogenase\tLmjF28.2860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2860\tcMDH\t\tGO:0016615\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11250\tF\tcytosolic malate dehydrogenase\tLmjF28.2860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2860\tcMDH\t\tGO:0030060\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11250\tF\tcytosolic malate dehydrogenase\tLmjF28.2860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2880\tLmjF.28.2880\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11220\tC\tdynein heavy chain, putative\tLmjF28.2880\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2880\tLmjF.28.2880\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11220\tC\tdynein heavy chain, putative\tLmjF28.2880\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2930\tPHO91\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508831.60\tC\tLow-affinity phosphate transporter PHO91\tLmjF28.2930\tmRNA\ttaxon:347515\t20120817\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2930\tPHO91\t\tGO:0015321\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508831.60\tF\tLow-affinity phosphate transporter PHO91\tLmjF28.2930\tmRNA\ttaxon:347515\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2930\tPHO91\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11160\tC\tLow-affinity phosphate transporter PHO91\tLmjF28.2930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2930\tPHO91\t\tGO:0030643\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508831.60\tP\tLow-affinity phosphate transporter PHO91\tLmjF28.2930\tmRNA\ttaxon:347515\t20160802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2950\tLmjF.28.2950\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF28.2950\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2960\tU5-40K\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11150\tC\tU5 snRNP-specific 40 kDa protein, putative\tLmjF28.2960\tmRNA\ttaxon:347515\t20090514\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2960\tU5-40K\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11150\tC\tU5 snRNP-specific 40 kDa protein, putative\tLmjF28.2960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2960\tU5-40K\t\tGO:0005829\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11150\tC\tU5 snRNP-specific 40 kDa protein, putative\tLmjF28.2960\tmRNA\ttaxon:347515\t20100927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2960\tU5-40K\t\tGO:0030627\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11150\tF\tU5 snRNP-specific 40 kDa protein, putative\tLmjF28.2960\tmRNA\ttaxon:347515\t20100927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.3005\tLmjF.28.3005\t\tGO:0004343\tPMID:21531872|GO_REF:0000024\tISO\tGeneDB:Tb927.11.11100\tF\tglucosamine 6-phosphate N-acetyltransferase, putative\tLmjF28.3005\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.3005\tLmjF.28.3005\t\tGO:0006044\tPMID:21531872|GO_REF:0000024\tISO\tGeneDB:Tb927.11.11100\tP\tglucosamine 6-phosphate N-acetyltransferase, putative\tLmjF28.3005\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.3005\tLmjF.28.3005\t\tGO:0020015\tPMID:21531872|GO_REF:0000024\tISO\tGeneDB:Tb927.11.11100\tC\tglucosamine 6-phosphate N-acetyltransferase, putative\tLmjF28.3005\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.3010\tNUP140\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11090\tC\tNucleoporin NUP140\tLmjF28.3010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.3010\tNUP140\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11090\tC\tNucleoporin NUP140\tLmjF28.3010\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.3010\tNUP140\t\tGO:0006406\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11090\tP\tNucleoporin NUP140\tLmjF28.3010\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.3030\tNUP149\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11080\tC\tNucleoporin NUP149\tLmjF28.3030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.3030\tNUP149\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11080\tC\tNucleoporin NUP149\tLmjF28.3030\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.3030\tNUP149\t\tGO:0006406\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11080\tP\tNucleoporin NUP149\tLmjF28.3030\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0010\tLmjF.29.0010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5630\tC\t3,2-trans-enoyl-CoA isomerase, mitochondrial precursor-like protein\tLmjF29.0010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0010\tLmjF.29.0010\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5630\tC\t3,2-trans-enoyl-CoA isomerase, mitochondrial precursor-like protein\tLmjF29.0010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0010\tLmjF.29.0010\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5630\tC\t3,2-trans-enoyl-CoA isomerase, mitochondrial precursor-like protein\tLmjF29.0010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0020\tLmjF.29.0020\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5620\tC\ttranscription factor-like protein\tLmjF29.0020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0030\tLmjF.29.0030\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5610\tC\tribosomal protein L3-like protein\tLmjF29.0030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0060\tLmjF.29.0060\t\tGO:0004830\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.5580\tF\ttryptophanyl-tRNA synthetase, putative\tLmjF29.0060\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0060\tLmjF.29.0060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5580\tC\ttryptophanyl-tRNA synthetase, putative\tLmjF29.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0060\tLmjF.29.0060\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.5580\tC\ttryptophanyl-tRNA synthetase, putative\tLmjF29.0060\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0070\tLmjF.29.0070\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5570\tC\tQA-SNARE protein putative\tLmjF29.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0070\tLmjF.29.0070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5570\tC\tQA-SNARE protein putative\tLmjF29.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0070\tLmjF.29.0070\t\tGO:0031982\tPMID:17026746\tEXP\t\tC\tQA-SNARE protein putative\tLmjF29.0070\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0070\tLmjF.29.0070\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5570\tC\tQA-SNARE protein putative\tLmjF29.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0090\tIFT27\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5550\tC\tsmall GTP-binding protein, putative\tLmjF29.0090|RABL4\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0090\tIFT27\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5550\tC\tsmall GTP-binding protein, putative\tLmjF29.0090|RABL4\tmRNA\ttaxon:347515\t20150305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0090\tIFT27\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5550\tC\tsmall GTP-binding protein, putative\tLmjF29.0090|RABL4\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0090\tIFT27\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5550\tP\tsmall GTP-binding protein, putative\tLmjF29.0090|RABL4\tmRNA\ttaxon:347515\t20150305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0090\tIFT27\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5550\tC\tsmall GTP-binding protein, putative\tLmjF29.0090|RABL4\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0090\tIFT27\t\tGO:1902017\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5550\tP\tsmall GTP-binding protein, putative\tLmjF29.0090|RABL4\tmRNA\ttaxon:347515\t20150305\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0100\tLmjF.29.0100\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5540\tC\thypothetical protein, conserved\tLmjF29.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0100\tLmjF.29.0100\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5540\tC\thypothetical protein, conserved\tLmjF29.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0100\tLmjF.29.0100\t\tGO:0035721\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5540\tP\thypothetical protein, conserved\tLmjF29.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0100\tLmjF.29.0100\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5540\tC\thypothetical protein, conserved\tLmjF29.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0100\tLmjF.29.0100\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5540\tP\thypothetical protein, conserved\tLmjF29.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0110\tLmjF.29.0110\t\tGO:0005640\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5530\tC\tC2 domain in Dock180 and Zizimin proteins, putative\tLmjF29.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0110\tLmjF.29.0110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5530\tC\tC2 domain in Dock180 and Zizimin proteins, putative\tLmjF29.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0110\tLmjF.29.0110\t\tGO:0020018\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5530\tC\tC2 domain in Dock180 and Zizimin proteins, putative\tLmjF29.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0120\tLmjF.29.0120\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5520\tC\tproteasome regulatory non-ATPase subunit, putative\tLmjF29.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0120\tLmjF.29.0120\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5520\tC\tproteasome regulatory non-ATPase subunit, putative\tLmjF29.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0130\tLmjF.29.0130\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5510\tC\thypothetical protein, conserved\tLmjF29.0130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0140\tRPB3\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5500\tC\tRNA polymerase subunit, putative\tLmjF29.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0140\tRPB3\t\tGO:0005665\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5500\tC\tRNA polymerase subunit, putative\tLmjF29.0140\tmRNA\ttaxon:347515\t20141209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0150\tPIFTB2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5490\tC\tPutative intraflagellar transport protein B2\tLmjF29.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0150\tPIFTB2\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5490\tC\tPutative intraflagellar transport protein B2\tLmjF29.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0150\tPIFTB2\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5490\tC\tPutative intraflagellar transport protein B2\tLmjF29.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0150\tPIFTB2\t\tGO:0035720\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5490\tP\tPutative intraflagellar transport protein B2\tLmjF29.0150\tmRNA\ttaxon:347515\t20150310\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0150\tPIFTB2\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5490\tP\tPutative intraflagellar transport protein 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0160\tLmjF.29.0160\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5480\tC\thypothetical protein, conserved\tLmjF29.0160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0170\tLmjF.29.0170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5470\tC\tprotein phosphatase inhibitor 2 (ipp-2), putative\tLmjF29.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0170\tLmjF.29.0170\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5470\tC\tprotein phosphatase inhibitor 2 (ipp-2), putative\tLmjF29.0170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0180\tLmjF.29.0180\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5460\tC\thypothetical protein, conserved\tLmjF29.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0180\tLmjF.29.0180\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5460\tC\thypothetical protein, conserved\tLmjF29.0180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0190\tLmjF.29.0190\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5450\tC\thypothetical protein, conserved\tLmjF29.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0190\tLmjF.29.0190\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5450\tC\thypothetical protein, conserved\tLmjF29.0190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0200\tLmjF.29.0200\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5440\tC\tSNF2 family N-terminal domain/Helicase conserved C-terminal domain containing protein, putative\tLmjF29.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0220\tLmjF.29.0220\t\tGO:0006888\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5420\tP\tprotein transport protein Sec24A, putative\tLmjF29.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0220\tLmjF.29.0220\t\tGO:0030127\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5420\tC\tprotein transport protein Sec24A, putative\tLmjF29.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0230\tLmjF.29.0230\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5410\tC\thypothetical protein, conserved\tLmjF29.0230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0250\tLmjF.29.0250\t\tGO:0008198\tPMID:19945457\tISO\tGeneDB:Tb927.7.7500\tF\tthymine-7-hydroxylase, putative\tLmjF29.0250\tmRNA\ttaxon:347515\t20091208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0270\tLmjF.29.0270\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5370\tC\thypothetical protein, conserved\tLmjF29.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0270\tLmjF.29.0270\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5370\tC\thypothetical protein, conserved\tLmjF29.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0270\tLmjF.29.0270\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5370\tC\thypothetical protein, conserved\tLmjF29.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0300\tLmjF.29.0300\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5360\tC\thypothetical protein, conserved\tLmjF29.0300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0330\tLmjF.29.0330\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5330\tC\tPutative GTPase activating protein for Arf, putative\tLmjF29.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0005634\tGO_REF:0000002\tISA\tUniProtKB:UBX5_YEAST\tC\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20130909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5320\tC\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5320\tC\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0005737\tGO_REF:0000002\tISA\tUniProtKB:UBX5_YEAST\tC\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20130909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5320\tP\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0031625\tGO_REF:0000002\tISA\tUniProtKB:UBXN7_HUMAN\tF\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20130909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5320\tC\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0043130\tGO_REF:0000002\tISA\tUniProtKB:UBXN7_HUMAN\tF\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20130909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5320\tC\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0350\tLmjF.29.0350\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5310\tC\thypothetical protein, conserved\tLmjF29.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0350\tLmjF.29.0350\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5310\tP\thypothetical protein, conserved\tLmjF29.0350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0380\tLmjF.29.0380\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5290\tC\tDomain of unknown function (DUF3451), putative\tLmjF29.0380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0380\tLmjF.29.0380\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5290\tC\tDomain of unknown function (DUF3451), putative\tLmjF29.0380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0390\tLmjF.29.0390\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5280\tC\tRNA binding protein, putative\tLmjF29.0390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0390\tLmjF.29.0390\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5280\tC\tRNA binding protein, putative\tLmjF29.0390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0400\tLmjF.29.0400\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5270\tC\tRNA polymerase Rpb4, putative\tLmjF29.0400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0400\tLmjF.29.0400\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5270\tC\tRNA polymerase Rpb4, putative\tLmjF29.0400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0420\tLmjF.29.0420\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF29.0420\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0430\tLmjF.29.0430\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5240\tC\thypothetical protein, conserved\tLmjF29.0430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0470\tLmjF.29.0470\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5210\tC\thypothetical protein, conserved\tLmjF29.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0470\tLmjF.29.0470\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5210\tC\thypothetical protein, conserved\tLmjF29.0470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0490\tLmjF.29.0490\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5190\tC\thypothetical protein, conserved\tLmjF29.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0490\tLmjF.29.0490\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5190\tC\thypothetical protein, conserved\tLmjF29.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0490\tLmjF.29.0490\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5190\tC\thypothetical protein, conserved\tLmjF29.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0510\tLmjF.29.0510\t\tGO:0003779\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5180\tF\tADF/Cofilin\tLmjF29.0510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0510\tLmjF.29.0510\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5180\tC\tADF/Cofilin\tLmjF29.0510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0510\tLmjF.29.0510\t\tGO:0030042\tPMID:20460437\tISO\tGeneDB:LinJ.29.0520\tP\tADF/Cofilin\tLmjF29.0510\tmRNA\ttaxon:347515\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0510\tLmjF.29.0510\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5180\tC\tADF/Cofilin\tLmjF29.0510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0510\tLmjF.29.0510\t\tGO:0032054\tPMID:20460437\tISO\tGeneDB:LinJ.29.0520\tP\tADF/Cofilin\tLmjF29.0510\tmRNA\ttaxon:347515\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0510\tLmjF.29.0510\t\tGO:0046907\tPMID:20460437\tISO\tGeneDB:LinJ.29.0520\tP\tADF/Cofilin\tLmjF29.0510\tmRNA\ttaxon:347515\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0510\tLmjF.29.0510\t\tGO:0051301\tPMID:20460437\tISO\tGeneDB:LinJ.29.0520\tP\tADF/Cofilin\tLmjF29.0510\tmRNA\ttaxon:347515\t20100720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0510\tLmjF.29.0510\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5180\tC\tADF/Cofilin\tLmjF29.0510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0540\tLmjF.29.0540\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5150\tC\texonuclease, putative\tLmjF29.0540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0550\tLmjF.29.0550\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5150\tC\texonuclease, putative\tLmjF29.0550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0660\tLmjF.29.0660\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3690\tC\tflagellar radial spoke protein-like, putative\tLmjF29.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0670\tLmjF.29.0670\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3680\tC\thypothetical protein, conserved\tLmjF29.0670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0680\tTRRM3\t\tGO:0003723\tGO_REF:0000024\tISO\tInterPro:IPR000504|UniProtKB:SGN1_YEAST|GeneDB:Tb927.3.3670\tF\tTriple RNA binding domain protein 3\tLmjF29.0680\tmRNA\ttaxon:347515\t20150602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0680\tTRRM3\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3670\tC\tTriple RNA binding domain protein 3\tLmjF29.0680\tmRNA\ttaxon:347515\t20090828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0680\tTRRM3\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3670\tC\tTriple RNA binding domain protein 3\tLmjF29.0680\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0680\tTRRM3\t\tGO:0006396\tGO_REF:0000011\tISO\tPfam:PF00076|GeneDB:Tb927.3.3670\tP\tTriple RNA binding domain protein 3\tLmjF29.0680\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0690\tLmjF.29.0690\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3660\tC\tNADH-ubiquinone oxidoreductase complex I subunit, 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0690\tLmjF.29.0690\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3660\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF29.0690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0710\tBBS7\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3640\tC\tbardet-biedl syndrome 7 protein\tLmjF29.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0710\tBBS7\t\tGO:0033572\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3640\tP\tbardet-biedl syndrome 7 protein\tLmjF29.0710\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0710\tBBS7\t\tGO:0034464\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3640\tC\tbardet-biedl syndrome 7 protein\tLmjF29.0710\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0720\tEF-Ts\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3630\tC\tElongation factor Ts, mitochondrial, putative\tLmjF29.0720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0720\tEF-Ts\t\tGO:0005739\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.3630\tC\tElongation factor Ts, mitochondrial, putative\tLmjF29.0720\tmRNA\ttaxon:347515\t20140128\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0750\tLmjF.29.0750\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3590\tC\tU3 small nucleolar ribonucleoprotein protein MPP10, putative\tLmjF29.0750\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0750\tLmjF.29.0750\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3590\tC\tU3 small nucleolar ribonucleoprotein protein MPP10, putative\tLmjF29.0750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { 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"rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0800\tNUP53b\t\tGO:0044613\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3540\tC\tNucleoporin NUP53b\tLmjF29.0800\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0820\tCPC\t\tGO:0008219\tPMID:21364675\tIMP\t\tP\tCPC cysteine peptidase, Clan CA, family C1, Cathepsin B-like\tLmjF29.0820\tmRNA\ttaxon:347515\t20110509\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0830\tLmjF.29.0830\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3510\tC\thypothetical protein, 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0850\tTDP1\t\tGO:0003677\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3490\tF\tTrypanosome DNA binding protein 1\tLmjF29.0850|HMGB\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0850\tTDP1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507951.114|GeneDB:TcCLB.504431.64\tC\tTrypanosome DNA binding protein 1\tLmjF29.0850|HMGB\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0005886\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tC\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20140227\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3450\tC\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0008283\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3A, 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0044008\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0044782\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20160921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0044782\tPMID:15582509\tIMP\t\tP\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20160921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0046903\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20140227\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0060170\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tC\tADP-ribosylation factor-like protein 3A, 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0885\tLmjF.29.0885\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3440\tC\tphytanoyl-CoA dioxygenase (PhyH), putative\tLmjF29.0885\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0885\tLmjF.29.0885\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3440\tC\tphytanoyl-CoA dioxygenase (PhyH), putative\tLmjF29.0885\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0885\tLmjF.29.0885\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3440\tP\tphytanoyl-CoA dioxygenase (PhyH), putative\tLmjF29.0885\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0920\tLmjF.29.0920\t\tGO:0005432\tPMID:19797662\tISO\tGeneDB:TcCLB.507951.270\tF\tLETM1 and EF-hand domain-containing protein 1, putative\tLmjF29.0920\tmRNA\ttaxon:347515\t20120524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0920\tLmjF.29.0920\t\tGO:0005509\tPMID:2500059\tISO\tGeneDB:TcCLB.507951.270\tF\tLETM1 and EF-hand domain-containing protein 1, putative\tLmjF29.0920\tmRNA\ttaxon:347515\t20120524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0920\tLmjF.29.0920\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4920\tC\tLETM1 and EF-hand domain-containing protein 1, putative\tLmjF29.0920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0920\tLmjF.29.0920\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4920\tC\tLETM1 and EF-hand domain-containing protein 1, putative\tLmjF29.0920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0920\tLmjF.29.0920\t\tGO:0005743\tPMID:19797662\tISO\tGeneDB:TcCLB.507951.270\tC\tLETM1 and EF-hand domain-containing protein 1, putative\tLmjF29.0920\tmRNA\ttaxon:347515\t20120524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0920\tLmjF.29.0920\t\tGO:0006851\tPMID:2500059\tISO\tGeneDB:TcCLB.507951.270\tP\tLETM1 and EF-hand domain-containing protein 1, putative\tLmjF29.0920\tmRNA\ttaxon:347515\t20120524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0920\tLmjF.29.0920\t\tGO:0016021\tPMID:19797662\tISO\tGeneDB:TcCLB.507951.270\tC\tLETM1 and EF-hand domain-containing protein 1, putative\tLmjF29.0920\tmRNA\ttaxon:347515\t20120524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0940\tLmjF.29.0940\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4940\tC\t5-histidylcysteine sulfoxide synthase, putative\tLmjF29.0940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0940\tLmjF.29.0940\t\tGO:0008198\tPMID:21247153\tISO\tGeneDB:TcCLB.507951.299\tF\t5-histidylcysteine sulfoxide synthase, 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when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0940\tLmjF.29.0940\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4940\tC\t5-histidylcysteine sulfoxide synthase, putative\tLmjF29.0940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0940\tLmjF.29.0940\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4940\tC\t5-histidylcysteine sulfoxide synthase, putative\tLmjF29.0940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1010\tLmjF.29.1010\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4990\tC\tputative NAD(P)H quinone oxidoreductase, PIG3 family, putative\tLmjF29.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1010\tLmjF.29.1010\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4990\tC\tputative NAD(P)H quinone oxidoreductase, PIG3 family, putative\tLmjF29.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1030\tLmjF.29.1030\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5010\tC\thypothetical protein, conserved\tLmjF29.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1040\tFLAM6\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5020\tC\tFlagellar Member 6\tLmjF29.1040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1040\tFLAM6\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042|SMART:SM00100\tF\tFlagellar Member 6\tLmjF29.1040\tmRNA\ttaxon:347515\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1040\tFLAM6\t\tGO:0031514\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5020\tC\tFlagellar Member 6\tLmjF29.1040\tmRNA\ttaxon:347515\t20150813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1050\tLmjF.29.1050\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5030\tC\tKU70 protein, putative\tLmjF29.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1070\tLmjF.29.1070\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5050\tF\tribosomal protein L1a, putative\tLmjF29.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1070\tLmjF.29.1070\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5050\tC\tribosomal protein L1a, putative\tLmjF29.1070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1070\tLmjF.29.1070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5050\tC\tribosomal protein L1a, putative\tLmjF29.1070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1080\tLmjF.29.1080\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5050\tF\tribosomal protein L1a, putative\tLmjF29.1080\tpseudogenic_transcript\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1080\tLmjF.29.1080\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5050\tC\tribosomal protein L1a, putative\tLmjF29.1080\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1080\tLmjF.29.1080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5050\tC\tribosomal protein L1a, putative\tLmjF29.1080\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1090\tLmjF.29.1090\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5050\tF\tribosomal protein L1a, putative\tLmjF29.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1090\tLmjF.29.1090\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5050\tC\tribosomal protein L1a, putative\tLmjF29.1090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1090\tLmjF.29.1090\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5050\tC\tribosomal protein L1a, putative\tLmjF29.1090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1100\tLmjF.29.1100\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.5060\tC\tAnkyrin repeats (3 copies), putative\tLmjF29.1100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1110\tLmjF.29.1110\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5070\tC\thypothetical protein, conserved\tLmjF29.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1150\tTXN2\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:LinJ.29.1240\tC\ttryparedoxin 2, putative\tLmjF29.1150\tmRNA\ttaxon:347515\t20090722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"TriTrypDB\tLmjF.29.1160\tTXN1\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5090\tP\ttryparedoxin 1, putative\tLmjF29.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1160\tTXN1\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.5090\tC\ttryparedoxin 1, putative\tLmjF29.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1160\tTXN1\t\tGO:0042744\tGO_REF:0000024\tISO\tGeneDB:LinJ.29.1250\tP\ttryparedoxin 1, putative\tLmjF29.1160\tmRNA\ttaxon:347515\t20090722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1210\tLmjF.29.1210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3830\tC\thypothetical protein, conserved\tLmjF29.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1210\tLmjF.29.1210\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3830\tC\thypothetical protein, conserved\tLmjF29.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1210\tLmjF.29.1210\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3830\tC\thypothetical protein, conserved\tLmjF29.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1220\tLmjF.29.1220\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3840\tC\tFamily of unknown function (DUF572), putative\tLmjF29.1220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1220\tLmjF.29.1220\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3840\tC\tFamily of unknown function (DUF572), putative\tLmjF29.1220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1230\tsec16\t\tGO:0006888\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.3850\tP\tCOPII coat assembly protein sec16, putative\tLmjF29.1230\tmRNA\ttaxon:347515\t20140425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1230\tsec16\t\tGO:0007029\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.3850\tP\tCOPII coat assembly protein sec16, putative\tLmjF29.1230\tmRNA\ttaxon:347515\t20140425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1230\tsec16\t\tGO:0007030\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.3850\tP\tCOPII coat assembly protein sec16, putative\tLmjF29.1230\tmRNA\ttaxon:347515\t20140425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1230\tsec16\t\tGO:0051046\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.3850\tP\tCOPII coat assembly protein sec16, putative\tLmjF29.1230\tmRNA\ttaxon:347515\t20140425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1230\tsec16\t\tGO:0070971\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.3850\tC\tCOPII coat assembly protein sec16, putative\tLmjF29.1230\tmRNA\ttaxon:347515\t20140425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1230\tsec16\t\tGO:0070973\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.3850\tP\tCOPII coat assembly protein sec16, putative\tLmjF29.1230\tmRNA\ttaxon:347515\t20140425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1280\tLmjF.29.1280\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3870\tC\tlipase domain protein, putative\tLmjF29.1280\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1290\tLmjF.29.1290\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3880\tC\thypothetical protein, conserved\tLmjF29.1290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1290\tLmjF.29.1290\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3880\tC\thypothetical protein, conserved\tLmjF29.1290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1310\tLmjF.29.1310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3900\tC\tcarnitine/choline acetyltransferase, putative\tLmjF29.1310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1320\tLmjF.29.1320\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3910\tC\tRNA polymerase Rpc34 subunit, putative\tLmjF29.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1330\tAUK2\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\tserine/threonine-protein kinase, putative\tLmjF29.1330\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1330\tAUK2\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tserine/threonine-protein kinase, putative\tLmjF29.1330\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1330\tAUK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tserine/threonine-protein kinase, putative\tLmjF29.1330\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1340\tLmjF.29.1340\t\tGO:0003723\tPMID:18840477\tISO\tGeneDB:Tb927.3.3960\tF\tRNA-binding protein, putative\tLmjF29.1340\tmRNA\ttaxon:347515\t20090819\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1340\tLmjF.29.1340\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3930\tC\tRNA-binding protein, putative\tLmjF29.1340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1400\tLmjF.29.1400\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3970\tC\tLYAR-type C2HC zinc finger, putative\tLmjF29.1400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1430\tLmjF.29.1430\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3990\tC\thypothetical protein, conserved\tLmjF29.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1430\tLmjF.29.1430\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3990\tC\thypothetical protein, conserved\tLmjF29.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1430\tLmjF.29.1430\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3990\tC\thypothetical protein, conserved\tLmjF29.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1440\tLmjF.29.1440\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4000\tP\tclathrin coat assembly protein ap19, putative\tLmjF29.1440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1450\tLmjF.29.1450\t\tGO:0004430\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.4020\tF\tphosphatidylinositol 4-kinase alpha, putative\tLmjF29.1450\tmRNA\ttaxon:347515\t20100816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1450\tLmjF.29.1450\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4020\tC\tphosphatidylinositol 4-kinase alpha, putative\tLmjF29.1450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1450\tLmjF.29.1450\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4020\tC\tphosphatidylinositol 4-kinase alpha, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1470\tLmjF.29.1470\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4040\tC\thypothetical protein, conserved\tLmjF29.1470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1490\tLmjF.29.1490\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4060\tC\tasparagine synthase, putative\tLmjF29.1490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1500\tLmjF.29.1500\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4110\tC\tNodulin-like, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1580\tLmjF.29.1580\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4160\tC\tXPC-binding domain containing protein, putative\tLmjF29.1580\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1580\tLmjF.29.1580\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4160\tC\tXPC-binding domain containing protein, putative\tLmjF29.1580\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1600\tLmjF.29.1600\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4190\tP\tendomembrane protein 70, putative\tLmjF29.1600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1630\tLmjF.29.1630\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4220\tC\tZn-finger domain protein, putative\tLmjF29.1630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1640\tABCH2\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tATP-binding cassette protein subfamily H, member 2, putative\tLmjF29.1640\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1650\tLmjF.29.1650\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4240\tC\tthioredoxin, putative\tLmjF29.1650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1660\tLmjF.29.1660\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4250\tC\thypothetical protein, conserved\tLmjF29.1660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1770\tLmjF.29.1770\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4300\tC\tparaflagellar rod protein 1D, putative\tLmjF29.1770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1770\tLmjF.29.1770\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4300\tC\tparaflagellar rod protein 1D, putative\tLmjF29.1770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1780\tLmjF.29.1780\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4340\tC\tdiphthamide synthesis protein, putative\tLmjF29.1780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1780\tLmjF.29.1780\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4340\tC\tdiphthamide synthesis protein, putative\tLmjF29.1780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1800\tLmjF.29.1800\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4360\tC\t40S ribosomal protein S15A, 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1820\tLmjF.29.1820\t\tGO:0005741\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.4380\tC\tTob55, putative\tLmjF29.1820\tmRNA\ttaxon:347515\t20090617\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1820\tLmjF.29.1820\t\tGO:0006461\tPMID:20659504|GO_REF:0000024\tISO\tGeneDB:Tb927.3.4380\tP\tTob55, putative\tLmjF29.1820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1820\tLmjF.29.1820\t\tGO:0043623\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.4380\tP\tTob55, putative\tLmjF29.1820\tmRNA\ttaxon:347515\t20090617\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1830\tGCVL-1\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4390\tC\tdihydrolipoamide dehydrogenase, putative\tLmjF29.1830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1840\tLmjF.29.1840\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4400\tC\thypothetical protein, conserved\tLmjF29.1840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1850\tLmjF.29.1850\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4410\tC\tpre-RNA processing PIH1/Nop17, putative\tLmjF29.1850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1850\tLmjF.29.1850\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4410\tC\tpre-RNA processing PIH1/Nop17, putative\tLmjF29.1850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1860\tLmjF.29.1860\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4420\tC\thypothetical protein, conserved\tLmjF29.1860\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1910\tLmjF.29.1910\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4440\tC\thypothetical protein, conserved\tLmjF29.1910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1930\tLmjF.29.1930\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4470\tC\thypothetical protein, conserved\tLmjF29.1930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1950\tLmjF.29.1950\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4490\tC\tprotein farnesyltransferase alpha subunit, putative\tLmjF29.1950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1950\tLmjF.29.1950\t\tGO:0018342\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4490\tP\tprotein farnesyltransferase alpha subunit, putative\tLmjF29.1950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1960\tFHc\t\tGO:0004333\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4500\tF\tFumarate hydratase class I, cytosolic\tLmjF29.1960\tmRNA\ttaxon:347515\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1960\tFHc\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4500\tC\tFumarate hydratase class I, cytosolic\tLmjF29.1960\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1960\tFHc\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4500\tC\tFumarate hydratase class I, cytosolic\tLmjF29.1960\tmRNA\ttaxon:347515\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1960\tFHc\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4500\tC\tFumarate hydratase class I, cytosolic\tLmjF29.1960\tmRNA\ttaxon:347515\t20151002\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1960\tFHc\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4500\tC\tFumarate hydratase class I, cytosolic\tLmjF29.1960\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1995\tLmjF.29.1995\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4530\tC\thypothetical protein, conserved\tLmjF29.1995\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1995\tLmjF.29.1995\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4530\tC\thypothetical protein, conserved\tLmjF29.1995\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2000\tLmjF.29.2000\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4540\tC\thypothetical protein, conserved\tLmjF29.2000\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2010\tLmjF.29.2010\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4550\tC\thypothetical protein, conserved\tLmjF29.2010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2020\tLmjF.29.2020\t\tGO:0009372\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4560\tP\tCAMK/CAMKL family protein kinase, putative\tLmjF29.2020\tmRNA\ttaxon:347515\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2020\tLmjF.29.2020\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4560\tP\tCAMK/CAMKL family protein kinase, putative\tLmjF29.2020\tmRNA\ttaxon:347515\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2090\tLmjF.29.2090\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4620\tC\tAAA domain containing protein, putative\tLmjF29.2090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2090\tLmjF.29.2090\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4620\tC\tAAA domain containing protein, putative\tLmjF29.2090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2090\tLmjF.29.2090\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4620\tC\tAAA domain containing protein, putative\tLmjF29.2090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2100\tPOMP37\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7210\tC\tPresent in the outer mitochondrial membrane proteome 37\tLmjF29.2100\tmRNA\ttaxon:347515\t20150928\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2110\tLmjF.29.2110\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4630\tC\tUDP-glucose:glycoprotein glucosyltransferase, putative\tLmjF29.2110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2120\tPOMP26\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4640\tC\tPresent in the outer mitochondrial membrane proteome 26\tLmjF29.2120\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2120\tPOMP26\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4640\tC\tPresent in the outer mitochondrial membrane proteome 26\tLmjF29.2120\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2140\tLmjF.29.2140\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4650\tC\tC-8 sterol isomerase-like protein\tLmjF29.2140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2160\tLmjF.29.2160\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4680\tC\trab-GDP dissociation inhibitor, putative\tLmjF29.2160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2210\tLRTP\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4770|GeneDB:Tb927.3.4730\tP\tleucine-rich repeat-containing protein\tLmjF29.2210\tmRNA\ttaxon:347515\t20141209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2210\tLRTP\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4770\tC\tleucine-rich repeat-containing protein\tLmjF29.2210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2210\tLRTP\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4730\tC\tleucine-rich repeat-containing protein\tLmjF29.2210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2210\tLRTP\t\tGO:0032054\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4770|GeneDB:Tb927.3.4730\tP\tleucine-rich repeat-containing protein\tLmjF29.2210\tmRNA\ttaxon:347515\t20141209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2210\tLRTP\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4770|GeneDB:Tb927.3.4730\tC\tleucine-rich repeat-containing protein\tLmjF29.2210\tmRNA\ttaxon:347515\t20141209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2210\tLRTP\t\tGO:0044782\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4770|GeneDB:Tb927.3.4730\tP\tleucine-rich repeat-containing protein\tLmjF29.2210\tmRNA\ttaxon:347515\t20141209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0000727\tGO_REF:0000012\tISA\tUniProtKB:SLD5_YEAST\tP\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0005634\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.3.4810|UniProtKB:SLD5_MOUSE\tC\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4810\tC\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0005737\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.3.4810|UniProtKB:SLD5_MOUSE\tC\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0006261\tGO_REF:0000012\tISA\tUniProtKB:SLD5_YEAST\tP\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0006270\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4810\tP\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0044786\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4810\tP\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2300\tLmjF.29.2300\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.4840\tC\tcysteine peptidase, Clan CA, family C19, putative\tLmjF29.2300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2320\tMKK1\t\tGO:0044008\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4860\tP\tmitogen-activated protein kinase kinase 1\tLmjF29.2320\tmRNA\ttaxon:347515\t20151006\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2360\tLmjF.29.2360\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3410\tC\taspartyl aminopeptidase, putative\tLmjF29.2360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2360\tLmjF.29.2360\t\tGO:0031514\tPMID:24741115\tISO\tGeneDB:Tb927.3.3410\tC\taspartyl aminopeptidase, putative\tLmjF29.2360\tmRNA\ttaxon:347515\t20150813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2380\tLmjF.29.2380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3390\tC\tkinesin, putative\tLmjF29.2380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2380\tLmjF.29.2380\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3390\tC\tkinesin, putative\tLmjF29.2380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2390\tLmjF.29.2390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3390\tC\tkinesin, putative\tLmjF29.2390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2390\tLmjF.29.2390\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3390\tC\tkinesin, putative\tLmjF29.2390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2440\tLmjF.29.2440\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3340\tC\t3'5'-cyclic nucleotide phosphodiesterase, putative\tLmjF29.2440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2440\tLmjF.29.2440\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3340\tC\t3'5'-cyclic nucleotide phosphodiesterase, putative\tLmjF29.2440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2450\tHSP20\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3330\tC\theat shock protein 20, putative\tLmjF29.2450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2450\tHSP20\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3330\tC\theat shock protein 20, putative\tLmjF29.2450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2460\tLmjF.29.2460\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3320\tC\t60S ribosomal protein L13, putative\tLmjF29.2460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2470\tLmjF.29.2470\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3320\tC\t60S ribosomal protein L13, putative\tLmjF29.2470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2500\tVPS4\t\tGO:0000815\tPMID:16497676\tIMP\t\tC\tvacuolar protein sorting-associated protein 4\tLmjF29.2500\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2500\tVPS4\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3280\tC\tvacuolar protein sorting-associated protein 4\tLmjF29.2500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2500\tVPS4\t\tGO:0010506\tPMID:16497676\tIMP\t\tP\tvacuolar protein sorting-associated protein 4\tLmjF29.2500\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2500\tVPS4\t\tGO:0016887\tPMID:16497676\tIMP\t\tF\tvacuolar protein sorting-associated protein 4\tLmjF29.2500\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2500\tVPS4\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3280\tC\tvacuolar protein sorting-associated protein 4\tLmjF29.2500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2510\tPFK\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3270\tF\tATP-dependent 6-phosphofructokinase, glycosomal\tLmjF29.2510\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2510\tPFK\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3270\tC\tATP-dependent 6-phosphofructokinase, glycosomal\tLmjF29.2510\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2520\tLmjF.29.2520\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3250\tC\tMIZ/SP-RING zinc finger, putative\tLmjF29.2520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2540\tLmjF.29.2540\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3230\tC\tNOL1/NOP2/sun family, putative\tLmjF29.2540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2550\tLmjF.29.2550\t\tGO:0005634\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.3220\tC\tRNA polymerase-associated protein CTR9, putative\tLmjF29.2550\tmRNA\ttaxon:347515\t20120529\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2550\tLmjF.29.2550\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3220\tC\tRNA polymerase-associated protein CTR9, 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when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2570\tNEK7\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3190\tC\tSerine/threonine-protein kinase NEK7, putative\tLmjF29.2570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2570\tNEK7\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3190\tC\tSerine/threonine-protein kinase NEK7, putative\tLmjF29.2570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2600\tPAP\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3160\tF\tpoly(A) polymerase, putative\tLmjF29.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2600\tPAP\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3160\tC\tpoly(A) polymerase, putative\tLmjF29.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2600\tPAP\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3160\tC\tpoly(A) polymerase, putative\tLmjF29.2600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2600\tPAP\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3160\tC\tpoly(A) polymerase, putative\tLmjF29.2600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2600\tPAP\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3160\tC\tpoly(A) polymerase, putative\tLmjF29.2600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2600\tPAP\t\tGO:0043629\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3160\tP\tpoly(A) polymerase, putative\tLmjF29.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2600\tPAP\t\tGO:0071050\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3160\tP\tpoly(A) polymerase, putative\tLmjF29.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2630\tPOMP24\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3130\tF\tPresent in the outer mitochondrial membrane proteome 24\tLmjF29.2630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2630\tPOMP24\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3130\tC\tPresent in the outer mitochondrial membrane proteome 24\tLmjF29.2630\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2650\tLmjF.29.2650\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3110\tC\tNuclear condensing complex subunits, C-term domain containing protein, putative\tLmjF29.2650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2650\tLmjF.29.2650\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3110\tC\tNuclear condensing complex subunits, C-term domain containing protein, putative\tLmjF29.2650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2670\tNEK6\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSerine/threonine-protein kinase NEK6, putative\tLmjF29.2670\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2670\tNEK6\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tSerine/threonine-protein kinase NEK6, putative\tLmjF29.2670\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2670\tNEK6\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tSerine/threonine-protein kinase NEK6, putative\tLmjF29.2670\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2680\tLmjF.29.2680\t\tGO:0004114\tPMID:16336277\tISO\tGeneDB:TcCLB.506697.20\tF\t3',5'-cyclic nucleotide phosphodiesterase, putative\tLmjF29.2680\tmRNA\ttaxon:347515\t20120427\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2680\tLmjF.29.2680\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3070\tC\t3',5'-cyclic nucleotide phosphodiesterase, putative\tLmjF29.2680\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2700\tLmjF.29.2700\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3050\tC\thypothetical protein, conserved\tLmjF29.2700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2710\tLmjF.29.2710\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3040\tC\tRight handed beta helix region, putative\tLmjF29.2710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2740\tLmjF.29.2740\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3020\tC\tactin-like protein, putative\tLmjF29.2740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2740\tLmjF.29.2740\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3020\tC\tactin-like protein, putative\tLmjF29.2740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2740\tLmjF.29.2740\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3020\tC\tactin-like protein, putative\tLmjF29.2740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2750\tLmjF.29.2750\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3010\tC\thypothetical protein, conserved\tLmjF29.2750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2760\tPIFTC3\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.3000\tC\tPutative intraflagellar transport protein C3\tLmjF29.2760\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2760\tPIFTC3\t\tGO:0030992\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3000\tC\tPutative intraflagellar transport protein C3\tLmjF29.2760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2760\tPIFTC3\t\tGO:0035720\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3000\tP\tPutative intraflagellar transport protein C3\tLmjF29.2760\tmRNA\ttaxon:347515\t20150310\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2760\tPIFTC3\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3000\tP\tPutative intraflagellar transport protein C3\tLmjF29.2760\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2760\tPIFTC3\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3000\tC\tPutative intraflagellar transport protein C3\tLmjF29.2760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2760\tPIFTC3\t\tGO:0097546\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3000\tC\tPutative intraflagellar transport protein C3\tLmjF29.2760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2770\tLmjF.29.2770\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2990\tC\thypothetical protein, conserved\tLmjF29.2770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2780\tLmjF.29.2780\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2980\tC\tmitochondrial carrier protein-like protein\tLmjF29.2780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2790\tLmjF.29.2790\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2970\tC\thypothetical protein, conserved\tLmjF29.2790\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2800\tIAGNH\t\tGO:0006166\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2960\tP\tinosine-adenosine-guanosine-nucleosidehydrolase, putative\tLmjF29.2800\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2800\tIAGNH\t\tGO:0016810\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2960\tF\tinosine-adenosine-guanosine-nucleosidehydrolase, putative\tLmjF29.2800\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2800\tIAGNH\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2960\tC\tinosine-adenosine-guanosine-nucleosidehydrolase, putative\tLmjF29.2800\tmRNA\ttaxon:347515\t20141208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2810\tLmjF.29.2810\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2950\tC\tribonuclease inhibitor-like protein\tLmjF29.2810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2810\tLmjF.29.2810\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2950\tC\tribonuclease inhibitor-like protein\tLmjF29.2810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2830\tLmjF.29.2830\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.3.2930\tC\tRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF29.2830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0020\tCYP9\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1400\tC\tcyclophilin 9, putative\tLmjF30.0020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0020\tCYP9\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1400\tC\tcyclophilin 9, putative\tLmjF30.0020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0030\tLmjF.30.0030\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1410\tC\thypothetical protein, conserved\tLmjF30.0030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0030\tLmjF.30.0030\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1410\tC\thypothetical protein, conserved\tLmjF30.0030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0030\tLmjF.30.0030\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1410\tC\thypothetical protein, conserved\tLmjF30.0030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0050\tLmjF.30.0050\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1430\tC\tMATH domain containing protein, putative\tLmjF30.0050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0060\tLmjF.30.0060\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1440\tC\thypothetical protein, conserved\tLmjF30.0060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0060\tLmjF.30.0060\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1440\tC\thypothetical protein, conserved\tLmjF30.0060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0060\tLmjF.30.0060\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1440\tC\thypothetical protein, conserved\tLmjF30.0060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0090\tLmjF.30.0090\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1470\tC\thypothetical protein, conserved\tLmjF30.0090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0100\tLmjF.30.0100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1480\tC\thypothetical protein, conserved\tLmjF30.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0100\tLmjF.30.0100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1480\tC\t\tLmjF30.0100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0120\tADS1\t\tGO:0008609\tPMID:12944391|PMID:19497128|GO_REF:0000024\tISO\tGeneDB:Tb927.6.1500\tF\talkyldihydroxyacetonephosphate synthase\tLmjF30.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0120\tADS1\t\tGO:0008611\tPMID:12944391|GO_REF:0000024\tISO\tGeneDB:Tb927.6.1500\tP\talkyldihydroxyacetonephosphate synthase\tLmjF30.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0120\tADS1\t\tGO:0020015\tPMID:12944391\tEXP\t\tC\talkyldihydroxyacetonephosphate synthase\tLmjF30.0120\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0120\tADS1\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1500\tC\talkyldihydroxyacetonephosphate synthase\tLmjF30.0120\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0150\tPOMP30\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1550\tC\tPresent in the outer mitochondrial membrane proteome 30\tLmjF30.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0150\tPOMP30\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1550\tC\tPresent in the outer mitochondrial membrane proteome 30\tLmjF30.0150\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0180\tLmjF.30.0180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1570\tC\t2-hydroxy-3-oxopropionate reductase, putative\tLmjF30.0180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0180\tLmjF.30.0180\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1570\tC\t2-hydroxy-3-oxopropionate reductase, putative\tLmjF30.0180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0190\tLmjF.30.0190\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1580\tC\tpolynucleotide kinase 3'-phosphatase, putative\tLmjF30.0190\tpseudogenic_transcript\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0200\tLmjF.30.0200\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1590\tC\thypothetical protein, conserved\tLmjF30.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0210\tLmjF.30.0210\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1610\tC\tribosomal RNA adenine dimethylase family protein, putative\tLmjF30.0210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0240\tLmjF.30.0240\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1660\tC\thypothetical protein, conserved\tLmjF30.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0250\tLmjF.30.0250\t\tGO:0000289\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1670\tP\tubiquitin hydrolase, putative\tLmjF30.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0250\tLmjF.30.0250\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1670\tP\tubiquitin hydrolase, putative\tLmjF30.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0260\tLmjF.30.0260\t\tGO:0006396\tPMID:19096045|GO_REF:0000024\tISO\tGeneDB:Tb927.6.1680\tP\tmitochondrial RNA binding protein 1, putative\tLmjF30.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0260\tLmjF.30.0260\t\tGO:0008270\tPMID:19096045\tISO\tGeneDB:Tb927.6.1680\tF\tmitochondrial RNA binding protein 1, putative\tLmjF30.0260\tmRNA\ttaxon:347515\t20120831\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0260\tLmjF.30.0260\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1680\tP\tmitochondrial RNA binding protein 1, putative\tLmjF30.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0270\tATG4.2\t\tGO:0000045\tPMID:16497676\tIMP\t\tP\tAUT2/APG4/ATG4 cysteine peptidase, putative\tLmjF30.0270\tmRNA\ttaxon:347515\t20090813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0270\tATG4.2\t\tGO:0008234\tPMID:19066473\tIDA\t\tF\tAUT2/APG4/ATG4 cysteine peptidase, putative\tLmjF30.0270\tmRNA\ttaxon:347515\t20090813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0340\tLmjF.30.0340\t\tGO:0000723\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1760\tP\tKU80 protein, putative\tLmjF30.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0340\tLmjF.30.0340\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1760\tC\tKU80 protein, putative\tLmjF30.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0350\tLmjF.30.0350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1770\tC\tkinesin, putative\tLmjF30.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0370\tMPK12\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\tmitogen-activated protein kinase 12, putative\tLmjF30.0370\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0370\tMPK12\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\tmitogen-activated protein kinase 12, putative\tLmjF30.0370\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0370\tMPK12\t\tGO:0009266\tPMID:17368580|GO_REF:0000024\tISO\tGeneDB:Tb927.6.1780\tP\tmitogen-activated protein kinase 12, putative\tLmjF30.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0380\tLmjF.30.0380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1800\tC\tphosphatase 2C, putative\tLmjF30.0380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0380\tLmjF.30.0380\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1800\tC\tphosphatase 2C, putative\tLmjF30.0380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0380\tLmjF.30.0380\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1800\tC\tphosphatase 2C, putative\tLmjF30.0380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0380\tLmjF.30.0380\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1800\tC\tphosphatase 2C, putative\tLmjF30.0380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0380\tLmjF.30.0380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1800\tC\tphosphatase 2C, putative\tLmjF30.0380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0380\tLmjF.30.0380\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1800\tC\tphosphatase 2C, putative\tLmjF30.0380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0380\tLmjF.30.0380\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1800\tC\tphosphatase 2C, putative\tLmjF30.0380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0405\tLmjF.30.0405\t\tGO:0006487\tGO_REF:0000002\tISA\tUniProtKB:CAX4_YEAST\tP\tdolichyl pyrophosphate phosphatase, putative\tLmjF30.0405\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0405\tLmjF.30.0405\t\tGO:0030176\tGO_REF:0000002\tISA\tUniProtKB:CAX4_YEAST\tC\tdolichyl pyrophosphate phosphatase, putative\tLmjF30.0405\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0405\tLmjF.30.0405\t\tGO:0047873\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1820\tF\tdolichyl pyrophosphate phosphatase, putative\tLmjF30.0405\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0405\tLmjF.30.0405\t\tGO:0047874\tGO_REF:0000002\tISA\tUniProtKB:CAX4_YEAST\tF\tdolichyl pyrophosphate phosphatase, putative\tLmjF30.0405\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0410\tLmjF.30.0410\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1830\tC\tWD-40 repeat protein\tLmjF30.0410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0410\tLmjF.30.0410\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1830\tC\tWD-40 repeat protein\tLmjF30.0410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0410\tLmjF.30.0410\t\tGO:0006378\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1830\tP\tWD-40 repeat protein\tLmjF30.0410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0430\tQSOX\t\tGO:0006457\tGO_REF:0000002\tISO\tGeneDB:Tb927.6.1850\tP\tquiescin sulfhydryl oxidase, putative\tLmjF30.0430\tmRNA\ttaxon:347515\t20100318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0430\tQSOX\t\tGO:0016971\tGO_REF:0000002\tISO\tGeneDB:Tb927.6.1850\tF\tquiescin sulfhydryl oxidase, putative\tLmjF30.0430\tmRNA\ttaxon:347515\t20100318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0430\tQSOX\t\tGO:0016972\tGO_REF:0000002\tISO\tGeneDB:Tb927.6.1850\tF\tquiescin sulfhydryl oxidase, putative\tLmjF30.0430\tmRNA\ttaxon:347515\t20100318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0440\tLmjF.30.0440\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1860\tC\tRibosome recycling factor, putative\tLmjF30.0440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0450\tEIF4E4\t\tGO:0000339\tPMID:15388875\tISA\tEMBL:Q04637\tF\tEukaryotic translation initiation factor 4E-4\tLmjF30.0450\tmRNA\ttaxon:347515\t20101102\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0450\tEIF4E4\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1870\tF\tEukaryotic translation initiation factor 4E-4\tLmjF30.0450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0450\tEIF4E4\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.187\tC\tEukaryotic translation initiation factor 4E-4\tLmjF30.0450\tmRNA\ttaxon:347515\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0450\tEIF4E4\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.187\tC\tEukaryotic translation initiation factor 4E-4\tLmjF30.0450\tmRNA\ttaxon:347515\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0450\tEIF4E4\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1870\tP\tEukaryotic translation initiation factor 4E-4\tLmjF30.0450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0450\tEIF4E4\t\tGO:0016281\tPMID:19321500\tIPI\tGeneDB:LmjF.16.1600\tC\tEukaryotic translation initiation factor 4E-4\tLmjF30.0450\tmRNA\ttaxon:347515\t20160127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0460\tLmjF.30.0460\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1880\tC\taspartyl-tRNA synthetase, putative\tLmjF30.0460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0480\tLmjF.30.0480\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1900\tC\tbystin, putative\tLmjF30.0480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0480\tLmjF.30.0480\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1900\tC\tbystin, putative\tLmjF30.0480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0480\tLmjF.30.0480\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1900\tC\tbystin, putative\tLmjF30.0480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0480\tLmjF.30.0480\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1900\tC\tbystin, putative\tLmjF30.0480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0480\tLmjF.30.0480\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1900\tC\tbystin, putative\tLmjF30.0480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0490\tLmjF.30.0490\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1910\tC\thypothetical protein, conserved\tLmjF30.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0490\tLmjF.30.0490\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1910\tC\thypothetical protein, conserved\tLmjF30.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0490\tLmjF.30.0490\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1910\tC\thypothetical protein, conserved\tLmjF30.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0520\tLmjF.30.0520\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1950\tC\tN-acetyltransferase B complex (NatB) non catalytic subunit, putative\tLmjF30.0520\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0540\tLmjF.30.0540\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.1970\tC\tnuclear cap binding protein, putative\tLmjF30.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0540\tLmjF.30.0540\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1970\tC\tnuclear cap binding protein, putative\tLmjF30.0540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0560\tLmjF.30.0560\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.1990\tC\thypothetical protein, conserved\tLmjF30.0560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0570\tLmjF.30.0570\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2000\tC\tspliceosome-associated protein, putative\tLmjF30.0570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0580\tLmjF.30.0580\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2010\tC\tAMP-binding enzyme, putative\tLmjF30.0580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0590\tBBS2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2020\tC\tBardet-Biedl syndrome 2 protein\tLmjF30.0590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0590\tBBS2\t\tGO:0020018\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2020\tC\tBardet-Biedl syndrome 2 protein\tLmjF30.0590\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0590\tBBS2\t\tGO:0030669\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2020\tC\tBardet-Biedl syndrome 2 protein\tLmjF30.0590\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0590\tBBS2\t\tGO:0034464\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2020\tC\tBardet-Biedl syndrome 2 protein\tLmjF30.0590\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0590\tBBS2\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2020\tC\tBardet-Biedl syndrome 2 protein\tLmjF30.0590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0620\tLmjF.30.0620\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2050\tC\tribosome biogenesis regulatory protein (RRS1), putative\tLmjF30.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0620\tLmjF.30.0620\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2050\tC\tribosome biogenesis regulatory protein (RRS1), putative\tLmjF30.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0630\tLmjF.30.0630\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2060\tC\thistidyl-tRNA synthetase, putative\tLmjF30.0630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0650\tLmjF.30.0650\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2080\tC\thypothetical protein, conserved\tLmjF30.0650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0650\tLmjF.30.0650\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2080\tC\thypothetical protein, conserved\tLmjF30.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0660\tLmjF.30.0660\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2090\tC\tpdz domain containing protein, putative\tLmjF30.0660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0710\tLmjF.30.0710\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2150\tC\tCDC16, putative\tLmjF30.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0710\tLmjF.30.0710\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2150\tC\tCDC16, putative\tLmjF30.0710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0740\tLmjF.30.0740\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2180\tC\thypothetical protein, conserved\tLmjF30.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0745\tLmjF.30.0745\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2190\tC\thypothetical protein, conserved\tLmjF30.0745\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0745\tLmjF.30.0745\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2190\tC\thypothetical protein, conserved\tLmjF30.0745\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0750\tLmjF.30.0750\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2200\tC\t4-methyl-5(beta-hydroxyethyl)-thiazole 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"GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0760\tLmjF.30.0760\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2210\tC\thypothetical protein, conserved\tLmjF30.0760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0770\tLmjF.30.0770\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2220\tC\thypothetical protein, conserved\tLmjF30.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0770\tLmjF.30.0770\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2220\tC\thypothetical protein, conserved\tLmjF30.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0770\tLmjF.30.0770\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2220\tC\thypothetical protein, conserved\tLmjF30.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0780\tLmjF.30.0780\t\tGO:0003723\tPMID:18369185|GO_REF:0000024\tISO\tGeneDB:Tb927.6.2230\tF\tmitochondrial oligo_U binding protein TBRGG1, putative\tLmjF30.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0780\tLmjF.30.0780\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2230\tF\tmitochondrial oligo_U binding protein TBRGG1, putative\tLmjF30.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0780\tLmjF.30.0780\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2230\tC\tmitochondrial oligo_U binding protein TBRGG1, putative\tLmjF30.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0780\tLmjF.30.0780\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2230\tC\tmitochondrial oligo_U binding protein TBRGG1, putative\tLmjF30.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0780\tLmjF.30.0780\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2230\tC\tmitochondrial oligo_U binding protein TBRGG1, putative\tLmjF30.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0780\tLmjF.30.0780\t\tGO:0032774\tPMID:19228586|GO_REF:0000024\tISO\tGeneDB:Tb927.6.2230\tP\tmitochondrial oligo_U binding protein TBRGG1, putative\tLmjF30.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0810\tLmjF.30.0810\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2270\tC\tAdoMet dependent proline di-methyltransferase, putative\tLmjF30.0810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0810\tLmjF.30.0810\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2330\tC\tAdoMet dependent proline di-methyltransferase, putative\tLmjF30.0810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0810\tLmjF.30.0810\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2330\tC\tAdoMet dependent proline di-methyltransferase, putative\tLmjF30.0810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0880\tLmjF.30.0880\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2360\tC\tadenosine kinase, putative\tLmjF30.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0880\tLmjF.30.0880\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2360\tC\tadenosine kinase, putative\tLmjF30.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0880\tLmjF.30.0880\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2360\tC\tadenosine kinase, putative\tLmjF30.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0940\tGCP4\t\tGO:0000930\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2400\tC\tGamma-tubulin complex component 4\tLmjF30.0940\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0940\tGCP4\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2400\tC\tGamma-tubulin complex component 4\tLmjF30.0940\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1030\tJ49\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2480\tC\tDNAj-like protein\tLmjF30.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1040\tSDH7\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.509053.140\tC\tsuccinate dehydrogenase subunit 7\tLmjF30.1040\tmRNA\ttaxon:347515\t20170511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1070\tLmjF.30.1070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2510\tC\tFlavinator of succinate dehydrogenase, putative\tLmjF30.1070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1070\tLmjF.30.1070\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2510\tC\tFlavinator of succinate dehydrogenase, putative\tLmjF30.1070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1070\tLmjF.30.1070\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2510\tC\tFlavinator of succinate dehydrogenase, putative\tLmjF30.1070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1100\tLmjF.30.1100\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2540\tC\tDREV methyltransferase, putative\tLmjF30.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1100\tLmjF.30.1100\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2540\tC\tDREV methyltransferase, putative\tLmjF30.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1110\tLmjF.30.1110\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2550\tF\tRNA-binding protein, putative\tLmjF30.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1110\tLmjF.30.1110\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2550\tC\tRNA-binding protein, putative\tLmjF30.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1120\tLmjF.30.1120\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2640\tC\timportin alpha, putative\tLmjF30.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1120\tLmjF.30.1120\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2640\tC\timportin alpha, putative\tLmjF30.1120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1130\tLmjF.30.1130\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2610\tC\thypothetical protein, conserved\tLmjF30.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1205\tLmjF.30.1205\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2700\tC\tsmall nuclear ribonucleoprotein polypeptide e, putative\tLmjF30.1205\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1230\tLmjF.30.1230\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2710\tC\tZinc finger, C3HC4 type (RING finger), putative\tLmjF30.1230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1260\tLmjF.30.1260\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2760\tC\thypothetical protein, conserved\tLmjF30.1260\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1290\tLmjF.30.1290\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2780\tC\tU3 small nuclear ribonucleoprotein (snRNP), putative\tLmjF30.1290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1330\tABCH3\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tATP-binding cassette protein subfamily H, member 3, putative\tLmjF30.1330\tmRNA\ttaxon:347515\t20090609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1340\tLmjF.30.1340\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2820\tC\thypothetical protein, conserved\tLmjF30.1340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1370\tLmjF.30.1370\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2850\tC\tPSP1 C-terminal conserved region, 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1450\tLmjF.30.1450\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2880\tC\tkinesin, putative\tLmjF30.1450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1450\tLmjF.30.1450\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2880\tC\tkinesin, putative\tLmjF30.1450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1540\tPPCDC\t\tGO:0004633\tGO_REF:0000024\tISS\tUniProtKB:COAC_HUMAN\tF\tphosphopantothenoylcysteine decarboxylase, 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1610\tFR1\t\tGO:0005886\tGO_REF:0000012\tISA\tGB:AEG66929\tC\tferric reductase transmembrane protein, putative\tLmjF30.1610\tmRNA\ttaxon:347515\t20141203\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1625\tLmjF.30.1625\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2600\tC\tProtein of unknown function (DUF1077), putative\tLmjF30.1625\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1640\tLmjF.30.1640\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2600\tC\tProtein of unknown function (DUF1077), putative\tLmjF30.1640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1640\tLmjF.30.1640\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2600\tP\tProtein of unknown function (DUF1077), putative\tLmjF30.1640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1660\tLmjF.30.1660\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2600\tP\tProtein of unknown function (DUF1077), putative\tLmjF30.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1670\tLmjF.30.1670\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.2630\tC\thypothetical protein, conserved\tLmjF30.1670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1770\tLmjF.30.1770\t\tGO:0030990\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3100\tC\tIntraflagellar transport complex B protein 46 C terminal, putative\tLmjF30.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1780\tCRK11\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3110\tC\tcdc2-related protein kinase 11, putative\tLmjF30.1780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1890\tADKn\t\tGO:0004017\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507023.280\tF\tAdenylate kinase, nuclear\tLmjF30.1890\tmRNA\ttaxon:347515\t20160714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1890\tADKn\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3210\tC\tAdenylate kinase, nuclear\tLmjF30.1890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1890\tADKn\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507023.280\tC\tAdenylate kinase, 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1890\tADKn\t\tGO:0009267\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507023.280\tP\tAdenylate kinase, nuclear\tLmjF30.1890\tmRNA\ttaxon:347515\t20160714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1890\tADKn\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507023.280\tC\tAdenylate kinase, nuclear\tLmjF30.1890\tmRNA\ttaxon:347515\t20160714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1890\tADKn\t\tGO:0016887\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507023.280\tF\tAdenylate kinase, 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1890\tADKn\t\tGO:0042134\tGO_REF:0000024\tISO\tGeneDB:TcCLB.507023.280\tF\tAdenylate kinase, nuclear\tLmjF30.1890\tmRNA\ttaxon:347515\t20160714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1900\tLmjF.30.1900\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3220\tP\thypothetical protein, conserved\tLmjF30.1900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1900\tLmjF.30.1900\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3220\tC\thypothetical protein, conserved\tLmjF30.1900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1900\tLmjF.30.1900\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3220\tC\thypothetical protein, conserved\tLmjF30.1900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1980\tLmjF.30.1980\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3250\tC\tC2H2 type zinc-finger (2 copies), putative\tLmjF30.1980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1980\tLmjF.30.1980\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3250\tC\tC2H2 type zinc-finger (2 copies), putative\tLmjF30.1980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1980\tLmjF.30.1980\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3250\tC\tC2H2 type zinc-finger (2 copies), putative\tLmjF30.1980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF30.2000\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2000\tIFT20\t\tGO:0031514\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3290\tC\tintraflagellar transport (IFT) protein, putative\tLmjF30.2000\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2000\tIFT20\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3290\tP\tintraflagellar transport (IFT) protein, putative\tLmjF30.2000\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2000\tIFT20\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3290\tC\tintraflagellar transport (IFT) protein, putative\tLmjF30.2000\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2030\tGPI14\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3300\tC\tmannosyltransferase, putative\tLmjF30.2030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2030\tGPI14\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3300\tC\tmannosyltransferase, putative\tLmjF30.2030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2040\tLmjF.30.2040\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3310\tC\tcalpain-like cysteine peptidase, putative\tLmjF30.2040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2040\tLmjF.30.2040\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3310\tC\tcalpain-like cysteine peptidase, putative\tLmjF30.2040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2080\tYCF45\t\tGO:0005739\tPMID:20470834|GO_REF:0000024\tISO\tGeneDB:Tb927.6.3350\tC\thypothetical protein, conserved\tLmjF30.2080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2080\tYCF45\t\tGO:0009292\tPMID:17826337\tISS\t\tP\thypothetical protein, conserved\tLmjF30.2080\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2120\tLmjF.30.2120\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3420\tP\tOligomerisation domain containing protein, putative\tLmjF30.2120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2170\tLmjF.30.2170\t\tGO:0004842\tGO_REF:0000012\tISA\tUniProtKB:ARI2_HUMAN\tF\tE3 ubiquitin-protein ligase, putative\tLmjF30.2170\tmRNA\ttaxon:347515\t20130812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2170\tLmjF.30.2170\t\tGO:0070936\tGO_REF:0000012\tISA\tUniProtKB:ARI2_HUMAN\tP\tE3 ubiquitin-protein ligase, putative\tLmjF30.2170\tmRNA\ttaxon:347515\t20150217\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2190\tLmjF.30.2190\t\tGO:0003723\tPMID:18840477|GO_REF:0000024\tISO\tGeneDB:Tb927.6.3480\tF\tRNA-binding protein, putative\tLmjF30.2190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2190\tLmjF.30.2190\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3480\tP\tRNA-binding protein, putative\tLmjF30.2190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2200\tLmjF.30.2200\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tZinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF30.2200\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2220\tLmjF.30.2220\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3520\tP\tUncharacterised ACR, YagE family COG1723, putative\tLmjF30.2220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2240\tLmjF.30.2240\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3530\tC\thypothetical protein, conserved\tLmjF30.2240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2240\tLmjF.30.2240\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3530\tC\thypothetical protein, conserved\tLmjF30.2240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2240\tLmjF.30.2240\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3530\tC\thypothetical protein, conserved\tLmjF30.2240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2250\tLmjF.30.2250\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3540\tC\tzinc-finger protein, conserved\tLmjF30.2250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2250\tLmjF.30.2250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3540\tC\tzinc-finger protein, conserved\tLmjF30.2250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2290\tLmjF.30.2290\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3580\tC\tATP-dependent DEAD/H DNA helicase recQ family- like protein\tLmjF30.2290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2310\tLmjF.30.2310\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3600\tC\thypothetical protein, conserved\tLmjF30.2310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2350\tSPL\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3630\tC\tsphingosine 1-phosphate lyase\tLmjF30.2350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2350\tSPL\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3630\tC\tsphingosine 1-phosphate lyase\tLmjF30.2350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2350\tSPL\t\tGO:0008117\tPMID:17290222\tIMP\t\tF\tsphingosine 1-phosphate lyase\tLmjF30.2350\tmRNA\ttaxon:347515\t20100205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2350\tSPL\t\tGO:0046335\tPMID:17290222\tIMP\t\tP\tsphingosine 1-phosphate lyase\tLmjF30.2350\tmRNA\ttaxon:347515\t20100205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2360\tLmjF.30.2360\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3640\tC\tzinc-finger protein, conserved\tLmjF30.2360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2370\tLmjF.30.2370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3650\tC\tADP-ribosylation factor-like protein\tLmjF30.2370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2370\tLmjF.30.2370\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3650\tC\tADP-ribosylation factor-like protein\tLmjF30.2370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2370\tLmjF.30.2370\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3650\tC\tADP-ribosylation factor-like protein\tLmjF30.2370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2370\tLmjF.30.2370\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3650\tC\tADP-ribosylation factor-like protein\tLmjF30.2370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2390\tLmjF.30.2390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3670\tC\thypothetical protein, conserved\tLmjF30.2390\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2400\tPOMP31\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3680\tC\tPresent in the outer mitochondrial membrane proteome 31\tLmjF30.2400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2400\tPOMP31\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3680\tC\tPresent in the outer mitochondrial membrane proteome 31\tLmjF30.2400\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0000214\tGO_REF:0000012\tISA\tUniProtKB:CLP1_HUMAN\tC\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3690\tC\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0005730\tGO_REF:0000012\tISA\tUniProtKB:CLP1_HUMAN\tC\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0006378\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3690\tP\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0006388\tGO_REF:0000012\tISA\tUniProtKB:CLP1_HUMAN\tP\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0030423\tGO_REF:0000012\tISA\tUniProtKB:CLP1_HUMAN\tP\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0051736\tGO_REF:0000012\tISA\tUniProtKB:CLP1_HUMAN\tF\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2520\tLmjF.30.2520\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3760\tC\thypothetical protein, conserved\tLmjF30.2520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2520\tLmjF.30.2520\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3760\tP\thypothetical protein, conserved\tLmjF30.2520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2540\tLmjF.30.2540\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3790\tC\tAAA family ATPase-like protein\tLmjF30.2540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2540\tLmjF.30.2540\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3790\tC\tAAA family ATPase-like protein\tLmjF30.2540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2540\tLmjF.30.2540\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3790\tC\tAAA family ATPase-like protein\tLmjF30.2540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2580\tPAPLE22\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3840\tC\treticulon domain protein, 22 kDa potentially aggravating protein (paple22)\tLmjF30.2580\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2600\tFTHS\t\tGO:0005829\tPMID:19450731\tEXP\t\tC\tformate--tetrahydrofolate ligase\tLmjF30.2600\tmRNA\ttaxon:347515\t20090611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2630\tLmjF.30.2630\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3890\tC\treplication factor C, subunit 2, putative\tLmjF30.2630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2630\tLmjF.30.2630\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3890\tC\treplication factor C, subunit 2, putative\tLmjF30.2630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2650\tLmjF.30.2650\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3920\tC\thypothetical protein, conserved\tLmjF30.2650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2660\tLmjF.30.2660\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3930\tC\thypothetical protein, conserved\tLmjF30.2660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2680\tLmjF.30.2680\t\tGO:0005458\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3960\tF\tTriose-phosphate Transporter family, putative\tLmjF30.2680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2680\tLmjF.30.2680\t\tGO:0005462\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3960\tF\tTriose-phosphate Transporter family, putative\tLmjF30.2680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2680\tLmjF.30.2680\t\tGO:0005463\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3960\tF\tTriose-phosphate Transporter family, putative\tLmjF30.2680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2690\tLmjF.30.2690\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3970\tC\tSH3 domain protein-like protein\tLmjF30.2690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2740\tSGT\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4000\tC\tsmall glutamine-rich tetratricopeptide repeat protein, putative\tLmjF30.2740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2740\tSGT\t\tGO:0005829\tPMID:19953351\tISO\tGeneDB:Linj30_V3.2470\tC\tsmall glutamine-rich tetratricopeptide repeat protein, putative\tLmjF30.2740\tmRNA\ttaxon:347515\t20100204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2740\tSGT\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4000\tP\tsmall glutamine-rich tetratricopeptide repeat protein, putative\tLmjF30.2740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2740\tSGT\t\tGO:0051087\tPMID:19953351\tISO\tGeneDB:Linj30_V3.2470\tF\tsmall glutamine-rich tetratricopeptide repeat protein, putative\tLmjF30.2740\tmRNA\ttaxon:347515\t20100204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2750\tLmjF.30.2750\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4040\tC\thypothetical protein, conserved\tLmjF30.2750\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2780\tLmjF.30.2780\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tZinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF30.2780\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2810\tLmjF.30.2810\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4080\tC\thypothetical protein, conserved\tLmjF30.2810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2820\tLmjF.30.2820\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4090\tC\tchaperonin HSP60/CNP60, putative\tLmjF30.2820\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2820\tLmjF.30.2820\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4090\tC\tchaperonin HSP60/CNP60, putative\tLmjF30.2820\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2820\tLmjF.30.2820\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4090\tC\tchaperonin HSP60/CNP60, putative\tLmjF30.2820\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2830\tLmjF.30.2830\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4100\tP\thypothetical protein, conserved\tLmjF30.2830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2830\tLmjF.30.2830\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4100\tC\thypothetical protein, conserved\tLmjF30.2830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2845\tSDH3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4130\tC\tsuccinate dehydrogenase subunit 3\tLmjF30.2845\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2845\tSDH3\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4130\tC\tsuccinate dehydrogenase subunit 3\tLmjF30.2845\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2845\tSDH3\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511523.14\tC\tsuccinate dehydrogenase subunit 3\tLmjF30.2845\tmRNA\ttaxon:347515\t20170511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2890\tLmjF.30.2890\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4200\tC\thypothetical protein, conserved\tLmjF30.2890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2890\tLmjF.30.2890\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4200\tC\thypothetical protein, conserved\tLmjF30.2890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2960\tLmjF.30.2960\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4270\tP\thypothetical protein, conserved\tLmjF30.2960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2970\tLmjF.30.2970\t\tGO:0020015\tPMID:1435864\tISO\tGeneDB:LmxM.29.2980\tC\tglyceraldehyde 3-phosphate dehydrogenase, glycosomal\tLmjF30.2970\tmRNA\ttaxon:347515\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2970\tLmjF.30.2970\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4300|GeneDB:Tb927.6.4280\tC\tglyceraldehyde 3-phosphate dehydrogenase, glycosomal\tLmjF30.2970\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2980\tLmjF.30.2980\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4300|GeneDB:Tb927.6.4280\tC\tglyceraldehyde 3-phosphate dehydrogenase, glycosomal\tLmjF30.2980\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2980\tLmjF.30.2980\t\tGO:0020015\tPMID:1435864\tISO\tGeneDB:LmxM.29.2980\tC\tglyceraldehyde 3-phosphate dehydrogenase, glycosomal\tLmjF30.2980\tmRNA\ttaxon:347515\t20090406\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3000\tLmjF.30.3000\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4330\tC\thypothetical protein, conserved\tLmjF30.3000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3015\tLmjF.30.3015\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4340\tC\tLsm5p, putative\tLmjF30.3015\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3015\tLmjF.30.3015\t\tGO:0016607\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4340\tC\tLsm5p, putative\tLmjF30.3015\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3020\tLmjF.30.3020\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4350\tC\thypothetical protein, conserved\tLmjF30.3020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3040\tEIF3D\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4370\tF\teukaryotic translation initiation factor 3 subunit 7\tLmjF30.3040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3040\tEIF3D\t\tGO:0005737\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\teukaryotic translation initiation factor 3 subunit 7\tLmjF30.3040\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3040\tEIF3D\t\tGO:0005852\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\teukaryotic translation initiation factor 3 subunit 7\tLmjF30.3040\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3060\tLmjF.30.3060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4390\tC\tkinesin, putative\tLmjF30.3060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3080\tHSK\t\tGO:0004413\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4430\tF\thomoserine kinase\tLmjF30.3080|HK\tmRNA\ttaxon:347515\t20160104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3080\tHSK\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4430\tC\thomoserine kinase\tLmjF30.3080|HK\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3080\tHSK\t\tGO:0009088\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4430\tP\thomoserine kinase\tLmjF30.3080|HK\tmRNA\ttaxon:347515\t20160104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3090\tLmjF.30.3090\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4440\tF\tRNA-binding protein 42 (RNA-binding motif protein 42), putative\tLmjF30.3090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3090\tLmjF.30.3090\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4440\tC\tRNA-binding protein 42 (RNA-binding motif protein 42), putative\tLmjF30.3090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3090\tLmjF.30.3090\t\tGO:0005844\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4440\tC\tRNA-binding protein 42 (RNA-binding motif protein 42), putative\tLmjF30.3090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3090\tLmjF.30.3090\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4440\tP\tRNA-binding protein 42 (RNA-binding motif protein 42), putative\tLmjF30.3090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3130\tLmjF.30.3130\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4480\tC\tvalyl-tRNA synthetase, putative\tLmjF30.3130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3130\tLmjF.30.3130\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4480\tC\tvalyl-tRNA synthetase, putative\tLmjF30.3130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3170\tLmjF.30.3170\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4520\tC\tTumour suppressor, Mitostatin, putative\tLmjF30.3170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3190\tHMGR\t\tGO:0004420\tPMID:10861207\tIDA\t\tF\t3-hydroxy-3-methylglutaryl-CoA reductase\tLmjF30.3190\tmRNA\ttaxon:347515\t20090930\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3190\tHMGR\t\tGO:0005739\tPMID:14699057|GO_REF:0000024\tISO\tGeneDB:Tb927.6.4540\tC\t3-hydroxy-3-methylglutaryl-CoA reductase\tLmjF30.3190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3190\tHMGR\t\tGO:0005759\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4540\tC\t3-hydroxy-3-methylglutaryl-CoA reductase\tLmjF30.3190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3190\tHMGR\t\tGO:0010142\tPMID:14699057\tIMP\t\tP\t3-hydroxy-3-methylglutaryl-CoA reductase\tLmjF30.3190\tmRNA\ttaxon:347515\t20090930\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3190\tHMGR\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4540\tC\t3-hydroxy-3-methylglutaryl-CoA reductase\tLmjF30.3190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3220\tLmjF.30.3220\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4560\tC\thypothetical protein, conserved\tLmjF30.3220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3235\tLmjF.30.3235\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4580\tC\thypothetical protein, conserved\tLmjF30.3235\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3240\tLmjF.30.3240\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4590\tC\tglutamyl-tRNA synthetase, putative\tLmjF30.3240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3240\tLmjF.30.3240\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4590\tC\tglutamyl-tRNA synthetase, putative\tLmjF30.3240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3250\tLmjF.30.3250\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4600\tC\tATP-dependent RNA helicase, putative\tLmjF30.3250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3260\tLmjF.30.3260\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4610\tC\tAnkyrin repeats (3 copies), putative\tLmjF30.3260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3300\tLmjF.30.3300\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4650\tC\tUV excision repair RAD23-like protein\tLmjF30.3300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3300\tLmjF.30.3300\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4650\tC\tUV excision repair RAD23-like protein\tLmjF30.3300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3300\tLmjF.30.3300\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4650\tC\tUV excision repair RAD23-like protein\tLmjF30.3300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3300\tLmjF.30.3300\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4650\tC\tUV excision repair RAD23-like protein\tLmjF30.3300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3310\tMORN1\t\tGO:0006897\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4670\tP\tMORN repeat-containing protein 1\tLmjF30.3310\tmRNA\ttaxon:347515\t20151202\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3310\tMORN1\tNOT\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4670\tC\tMORN repeat-containing protein 1\tLmjF30.3310\tmRNA\ttaxon:347515\t20150527\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3330\tLmjF.30.3330\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3180\tC\thypothetical protein, conserved\tLmjF30.3330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3330\tLmjF.30.3330\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.3180\tC\thypothetical protein, conserved\tLmjF30.3330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3360\tLmjF.30.3360\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4710\tC\tcalmodulin-related protein, putative\tLmjF30.3360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3390\tLmjF.30.3390\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4740\tC\tCAS/CSE/importin domain protein, putative\tLmjF30.3390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3410\tLmjF.30.3410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4750\tC\thypothetical protein, conserved\tLmjF30.3410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3420\tLmjF.30.3420\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4760\tC\tT-complex protein 11, putative\tLmjF30.3420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3420\tLmjF.30.3420\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4760\tC\tT-complex protein 11, putative\tLmjF30.3420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3430\tMKT1\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4770\tF\tXPG/Rad2 DNA repair endonuclease, putative\tLmjF30.3430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3430\tMKT1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4770\tC\tXPG/Rad2 DNA repair endonuclease, putative\tLmjF30.3430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3430\tMKT1\t\tGO:0006281\tGO_REF:0000002\tISM\tInterPro:IPR006084\tP\tXPG/Rad2 DNA repair endonuclease, putative\tLmjF30.3430\tmRNA\ttaxon:347515\t20160115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3430\tMKT1\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4770\tP\tXPG/Rad2 DNA repair endonuclease, putative\tLmjF30.3430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3440\tLmjF.30.3440\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4780\tC\tDNA ligase I, putative\tLmjF30.3440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3450\tLmjF.30.3450\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4800\tC\thypothetical protein, conserved\tLmjF30.3450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3480\tCPC1\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4820\tP\tchromosomal passenger complex protein 1\tLmjF30.3480\tmRNA\ttaxon:347515\t20100127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3480\tCPC1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4820\tC\tchromosomal passenger complex protein 1\tLmjF30.3480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3480\tCPC1\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4820\tP\tchromosomal passenger complex protein 1\tLmjF30.3480\tmRNA\ttaxon:347515\t20100127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3480\tCPC1\t\tGO:0032133\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4820\tC\tchromosomal passenger complex protein 1\tLmjF30.3480\tmRNA\ttaxon:347515\t20100127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3480\tCPC1\t\tGO:0051225\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4820\tP\tchromosomal passenger complex protein 1\tLmjF30.3480\tmRNA\ttaxon:347515\t20100127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3500\tMETK1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4920|GeneDB:Tb927.6.4840\tC\tS-adenosylmethionine synthetase\tLmjF30.3500\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3500\tMETK1\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4920\tC\tS-adenosylmethionine synthetase\tLmjF30.3500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3520\tMETK2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4920|GeneDB:Tb927.6.4840\tC\tS-adenosylmethionine synthetase\tLmjF30.3520\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3520\tMETK2\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4920\tC\tS-adenosylmethionine 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3570\tLmjF.30.3570\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tZinc finger CCCH domain-containing protein\tLmjF30.3570\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3580\tLmjF.30.3580\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.4970\tC\tserine/arginine-rich protein specific kinase SRPK, putative\tLmjF30.3580\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3600\tLmjF.30.3600\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4990\tC\tATP synthase, epsilon chain, putative\tLmjF30.3600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3620\tLmjF.30.3620\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.5010\tF\thypothetical protein, conserved\tLmjF30.3620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3620\tLmjF.30.3620\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.5010\tC\thypothetical protein, conserved\tLmjF30.3620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3620\tLmjF.30.3620\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.5010\tP\thypothetical protein, conserved\tLmjF30.3620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3640\tCMF46\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.5030\tC\tDynein regulatory complex subunit 3\tLmjF30.3640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3640\tCMF46\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.5030\tC\tDynein regulatory complex subunit 3\tLmjF30.3640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3640\tCMF46\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.5030\tP\tDynein regulatory complex subunit 3\tLmjF30.3640\tmRNA\ttaxon:347515\t20090527\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3660\tLmjF.30.3660\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.5050\tC\tV-type ATPase, C subunit, putative\tLmjF30.3660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3660\tLmjF.30.3660\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.5050\tP\tV-type ATPase, C subunit, putative\tLmjF30.3660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3680\tLmjF.30.3680\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.5070\tC\thypothetical protein, conserved\tLmjF30.3680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3690\tLmjF.30.3690\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.5080\tC\tProtein of unknown function (DUF3808), putative\tLmjF30.3690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3700\tLmjF.30.3700\t\tGO:1990900\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.5090\tC\thypothetical protein, conserved\tLmjF30.3700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3710\tLmjF.30.3710\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.5110\tC\tCPSF-domain protein, putative\tLmjF30.3710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3710\tLmjF.30.3710\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.6.5110\tC\tCPSF-domain protein, putative\tLmjF30.3710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0000331\tPMID:17640270\tIMP\t\tC\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0005886\tPMID:26259900\tIDA\t\tC\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0006971\tPMID:17640270\tIMP\t\tP\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0010038\tPMID:20067981\tIDA\t\tP\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20100415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0015250\tPMID:17640270\tIMP\t\tF\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0015254\tPMID:17640270\tIMP\t\tF\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0015793\tPMID:17640270\tIMP\t\tP\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0020016\tPMID:17640270\tIMP\t\tC\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0042493\tPMID:23421749\tIMP\t\tP\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0043575\tPMID:17640270\tIMP\t\tP\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0046873\tPMID:20067981\tIMP\t\tF\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20190429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0046873\tPMID:15138256\tIMP\t\tF\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20190429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0046873\tGO_REF:0000002\tISO\tGeneDB:LmxM.30.0020\tF\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20090601\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0060170\tPMID:17640270|PMID:26259900\tIMP\t\tC\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0070838\tPMID:15138256\tIMP\t\tP\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20190429\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0060\tLmjF.31.0060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12300\tC\thypothetical protein, conserved\tLmjF31.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0070\tLmjF.31.0070\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12310\tC\thelicase-like protein\tLmjF31.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0080\tLmjF.31.0080\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF31.0080\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0080\tLmjF.31.0080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12330\tC\thypothetical protein, conserved\tLmjF31.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0080\tLmjF.31.0080\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12330\tP\thypothetical protein, conserved\tLmjF31.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0110\tLmjF.31.0110\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6460\tC\tintergrin alpha chain protein, putative\tLmjF31.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0120\tLmjF.31.0120\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3780\tC\thypothetical protein, conserved\tLmjF31.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0120\tLmjF.31.0120\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3780\tC\thypothetical protein, conserved\tLmjF31.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0140\tLmjF.31.0140\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3790\tC\tubiquitin carboxyl-terminal hydrolase, putative\tLmjF31.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0140\tLmjF.31.0140\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3790\tC\tubiquitin carboxyl-terminal hydrolase, putative\tLmjF31.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0140\tLmjF.31.0140\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3790\tC\tubiquitin carboxyl-terminal hydrolase, putative\tLmjF31.0140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0150\tLmjF.31.0150\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3800\tC\thypothetical protein, conserved\tLmjF31.0150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0150\tLmjF.31.0150\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3800\tC\thypothetical protein, conserved\tLmjF31.0150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0160\tRPB2\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3810\tC\tDNA-directed RNA polymerase II subunit 2, putative\tLmjF31.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0160\tRPB2\t\tGO:0005665\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3810\tC\tDNA-directed RNA polymerase II subunit 2, putative\tLmjF31.0160\tmRNA\ttaxon:347515\t20141211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0180\tLmjF.31.0180\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3830\tC\thypothetical protein, conserved\tLmjF31.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0180\tLmjF.31.0180\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3830\tC\thypothetical protein, conserved\tLmjF31.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0180\tLmjF.31.0180\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3830\tC\thypothetical protein, conserved\tLmjF31.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0190\tLmjF.31.0190\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3840\tC\tnucleolar protein, putative\tLmjF31.0190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0190\tLmjF.31.0190\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3840\tC\tnucleolar protein, putative\tLmjF31.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0200\tLmjF.31.0200\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3850\tC\tWD repeat protein\tLmjF31.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0200\tLmjF.31.0200\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3850\tC\tWD repeat protein\tLmjF31.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0200\tLmjF.31.0200\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3850\tC\tWD repeat protein\tLmjF31.0200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0200\tLmjF.31.0200\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3850\tC\tWD repeat protein\tLmjF31.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0200\tLmjF.31.0200\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3850\tC\tWD repeat protein\tLmjF31.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0210\tLmjF.31.0210\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4110\tC\thypothetical protein, conserved\tLmjF31.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0210\tLmjF.31.0210\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4110\tC\thypothetical protein, conserved\tLmjF31.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0210\tLmjF.31.0210\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4110\tC\thypothetical protein, conserved\tLmjF31.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0210\tLmjF.31.0210\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4110\tC\thypothetical protein, conserved\tLmjF31.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0210\tLmjF.31.0210\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4110\tC\thypothetical protein, conserved\tLmjF31.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0220\tLmjF.31.0220\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4120\tC\thypothetical protein, conserved\tLmjF31.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0230\tLmjF.31.0230\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4130\tC\thypothetical protein, conserved\tLmjF31.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0250\tLmjF.31.0250\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3890\tF\tATP-dependent RNA helicase, putative\tLmjF31.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0250\tLmjF.31.0250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3890\tC\tATP-dependent RNA helicase, putative\tLmjF31.0250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0290\tKIN13-4\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3910\tC\tKinesin-13 4, putative\tLmjF31.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0290\tKIN13-4\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3910\tC\tKinesin-13 4, putative\tLmjF31.0290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0290\tKIN13-4\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3910\tC\tKinesin-13 4, putative\tLmjF31.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0290\tKIN13-4\t\tGO:0097542\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3910\tC\tKinesin-13 4, putative\tLmjF31.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0320\tAAT1.1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3930\tC\tamino acid transporter, putative\tLmjF31.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0320\tAAT1.1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3930\tC\tamino acid transporter, putative\tLmjF31.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0320\tAAT1.1\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3930\tC\tamino acid transporter, putative\tLmjF31.0320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0390\tCALP2\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3940\tC\tcalpain-like cysteine peptidase, putative\tLmjF31.0390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0390\tCALP2\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3940\tC\tcalpain-like cysteine peptidase, putative\tLmjF31.0390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0390\tCALP2\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3940\tC\tcalpain-like cysteine peptidase, putative\tLmjF31.0390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0440\tCAP5.5\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3950\tC\tcytoskeleton-associated protein CAP5.5, putative\tLmjF31.0440|CALP1\tmRNA\ttaxon:347515\t20141211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0440\tCAP5.5\t\tGO:0020038\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3950\tC\tcytoskeleton-associated protein CAP5.5, putative\tLmjF31.0440|CALP1\tmRNA\ttaxon:347515\t20141211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0440\tCAP5.5\t\tGO:0030863\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3950\tC\tcytoskeleton-associated protein CAP5.5, putative\tLmjF31.0440|CALP1\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0440\tCAP5.5\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3950\tC\tcytoskeleton-associated protein CAP5.5, putative\tLmjF31.0440|CALP1\tmRNA\ttaxon:347515\t20141211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0470\tLmjF.31.0470\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3960\tC\thypothetical protein, conserved\tLmjF31.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0470\tLmjF.31.0470\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3960\tC\thypothetical protein, conserved\tLmjF31.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0470\tLmjF.31.0470\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3960\tC\thypothetical protein, conserved\tLmjF31.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0520\tLmjF.31.0520\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4030\tC\tCCCH zinc finger in TRM13 protein/U11-48K-like CHHC zinc finger/Methyltransferase TRM13, putative\tLmjF31.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0520\tLmjF.31.0520\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4030\tC\tCCCH zinc finger in TRM13 protein/U11-48K-like CHHC zinc finger/Methyltransferase TRM13, putative\tLmjF31.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0520\tLmjF.31.0520\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4030\tC\tCCCH zinc finger in TRM13 protein/U11-48K-like CHHC zinc finger/Methyltransferase TRM13, putative\tLmjF31.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0540\tGAT1\t\tGO:0005215\tPMID:16754359|GO_REF:0000024\tISO\tGeneDB:Tb927.4.4050\tF\tglycosomal transporter (GAT1), putative\tLmjF31.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0540\tGAT1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4050\tC\tglycosomal transporter (GAT1), putative\tLmjF31.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0540\tGAT1\t\tGO:0015908\tPMID:16754359|GO_REF:0000024\tISO\tGeneDB:Tb927.4.4050\tP\tglycosomal transporter (GAT1), putative\tLmjF31.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0540\tGAT1\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tglycosomal transporter (GAT1), putative\tLmjF31.0540\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0540\tGAT1\t\tGO:0046860\tPMID:16754359|GO_REF:0000024\tISO\tGeneDB:Tb927.4.4050\tC\tglycosomal transporter (GAT1), putative\tLmjF31.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0560\tLmjF.31.0560\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.4070\tC\tmevalonate kinase, putative\tLmjF31.0560\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0600\tLmjF.31.0600\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4090\tC\thypothetical protein, conserved\tLmjF31.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0600\tLmjF.31.0600\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4090\tC\thypothetical protein, conserved\tLmjF31.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0610\tLmjF.31.0610\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4100\tC\thypothetical protein, conserved\tLmjF31.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0610\tLmjF.31.0610\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4100\tC\thypothetical protein, conserved\tLmjF31.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0610\tLmjF.31.0610\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4100\tC\thypothetical protein, conserved\tLmjF31.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0620\tLmjF.31.0620\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4140\tC\thypothetical protein, conserved\tLmjF31.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0630\tLmjF.31.0630\t\tGO:0000963\tPMID:18073385|GO_REF:0000024\tISO\tGeneDB:Tb927.4.4150\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF31.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0630\tLmjF.31.0630\t\tGO:0003723\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.4.4150\tF\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF31.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0630\tLmjF.31.0630\t\tGO:0003729\tPMID:18073385|GO_REF:0000024\tISO\tGeneDB:Tb927.4.4150\tF\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF31.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0630\tLmjF.31.0630\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.4150\tC\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF31.0630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0630\tLmjF.31.0630\t\tGO:0005739\tPMID:18073385|GO_REF:0000024\tISO\tGeneDB:Tb927.4.4150\tC\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF31.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0630\tLmjF.31.0630\t\tGO:0016554\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.4.4150\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF31.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0630\tLmjF.31.0630\t\tGO:0048255\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.4.4150\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF31.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0640\tLmjF.31.0640\t\tGO:0003723\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.4160\tF\tmitochondrial RNA binding protein, putative\tLmjF31.0640\tmRNA\ttaxon:347515\t20120906\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0640\tLmjF.31.0640\t\tGO:0016070\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.4160\tP\tmitochondrial RNA binding protein, putative\tLmjF31.0640\tmRNA\ttaxon:347515\t20120906\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0650\tLmjF.31.0650\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4170\tC\tFtsJ-like methyltransferase, putative\tLmjF31.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0650\tLmjF.31.0650\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4170\tC\tFtsJ-like methyltransferase, putative\tLmjF31.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0650\tLmjF.31.0650\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4170\tC\tFtsJ-like methyltransferase, putative\tLmjF31.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0700\tLmjF.31.0700\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4210\tC\tATP-dependent zinc metallopeptidase, putative\tLmjF31.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0700\tLmjF.31.0700\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4210\tC\tATP-dependent zinc metallopeptidase, putative\tLmjF31.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0830\tLmjF.31.0830\t\tGO:0016298\tGO_REF:0000002\tISO\tGeneDB:LdBPK_310860.1\tF\tlipase, putative\tLmjF31.0830\tmRNA\ttaxon:347515\t20100513\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0830\tLmjF.31.0830\t\tGO:0043657\tGO_REF:0000002\tISO\tGeneDB:LdBPK_310860.1\tC\tlipase, putative\tLmjF31.0830\tmRNA\ttaxon:347515\t20100513\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0860\tLmjF.31.0860\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4220\tC\tras-like small 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1030\tLmjF.31.1030\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4230\tC\thypothetical protein, conserved\tLmjF31.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1030\tLmjF.31.1030\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4230\tP\thypothetical protein, conserved\tLmjF31.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1060\tLmjF.31.1060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.4300\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1060\tLmjF.31.1060\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4300\tC\thypothetical protein, conserved\tLmjF31.1060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1100\tLmjF.31.1100\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4340\tC\tDomain of unknown function (DUF4498), putative\tLmjF31.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1100\tLmjF.31.1100\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4340\tC\tDomain of unknown function (DUF4498), putative\tLmjF31.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1140\tLmjF.31.1140\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.4360\tC\tmonoglyceride lipase, putative\tLmjF31.1140\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1140\tLmjF.31.1140\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4360\tC\tmonoglyceride lipase, putative\tLmjF31.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1220\tVP1\t\tGO:0000139\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511385.30\tC\tPyrophosphate-energized vacuolar membrane proton pump 1, putative\tLmjF31.1220|PPase1\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1220\tVP1\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511385.30\tC\tPyrophosphate-energized vacuolar membrane proton pump 1, putative\tLmjF31.1220|PPase1\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1220\tVP1\t\tGO:0006874\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4380\tP\tPyrophosphate-energized vacuolar membrane proton pump 1, putative\tLmjF31.1220|PPase1\tmRNA\ttaxon:347515\t20150323\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1220\tVP1\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4380|GeneDB:TcCLB.511385.30\tC\tPyrophosphate-energized vacuolar membrane proton pump 1, putative\tLmjF31.1220|PPase1\tmRNA\ttaxon:347515\t20150323\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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e\tABCC4|LmjF31.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1280\tABCC5\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4490\tP\tATP-binding cassette protein subfamily C, member 5, putative\tLmjF31.1280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1290\tABCC6\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4490\tP\tATP-binding cassette protein subfamily C, member 6, putative\tLmjF31.1290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1320\tLmjF.31.1320\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4510\tC\tprotein phosphatase 2C, putative\tLmjF31.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1320\tLmjF.31.1320\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4510\tP\tprotein phosphatase 2C, putative\tLmjF31.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1400\tLmjF.31.1400\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.4550\tC\thypothetical protein, conserved\tLmjF31.1400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1430\tPRP1\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4490\tP\tpentamidine resistance protein 1\tABCC7|LmjF31.1430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1490\tLmjF.31.1490\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.4560\tC\thypothetical protein, conserved\tLmjF31.1490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1490\tLmjF.31.1490\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.4560\tC\thypothetical protein, conserved\tLmjF31.1490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1500\tLmjF.31.1500\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4570\tC\thypothetical protein, conserved\tLmjF31.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1500\tLmjF.31.1500\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4570\tP\thypothetical protein, conserved\tLmjF31.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1510\tLmjF.31.1510\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4580\tF\thypothetical protein, conserved\tLmjF31.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1510\tLmjF.31.1510\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4580\tC\thypothetical protein, conserved\tLmjF31.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1550\tLmjF.31.1550\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4600\tC\tMitochondrial ribosomal protein L51 / S25 / CI-B8 domain containing protein, putative\tLmjF31.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1560\tLmjF.31.1560\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4610\tC\thypothetical protein, conserved\tLmjF31.1560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1620\tLmjF.31.1620\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4660\tC\tProtein of unknown function DUF84, putative\tLmjF31.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1620\tLmjF.31.1620\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4660\tC\tProtein of unknown function DUF84, putative\tLmjF31.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1660\tLmjF.31.1660\t\tGO:0071162\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4680\tC\tGINS complex subunit Psf3, putative\tLmjF31.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1660\tLmjF.31.1660\t\tGO:0071163\tGO_REF:0000012\tISA\tUniProtKB:PSF3_SCHPO\tP\tGINS complex subunit Psf3, putative\tLmjF31.1660\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1660\tLmjF.31.1660\t\tGO:0071165\tGO_REF:0000012\tISA\tUniProtKB:PSF3_SCHPO\tP\tGINS complex subunit Psf3, putative\tLmjF31.1660\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1670\tLmjF.31.1670\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.4690\tC\thypothetical protein, conserved\tLmjF31.1670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1670\tLmjF.31.1670\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.4690\tC\thypothetical protein, conserved\tLmjF31.1670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1680\tLmjF.31.1680\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.4700\tC\thypothetical protein, conserved\tLmjF31.1680\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1680\tLmjF.31.1680\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.4700\tC\thypothetical protein, conserved\tLmjF31.1680\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1700\tLmjF.31.1700\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4720\tC\thypothetical protein, conserved\tLmjF31.1700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1780\tDHCS\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4740\tC\tSphingosine N-acyltransferase, putative\tLmjF31.1780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1780\tDHCS\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4740\tC\tSphingosine N-acyltransferase, putative\tLmjF31.1780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1780\tDHCS\t\tGO:0046513\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tP\tSphingosine N-acyltransferase, putative\tLmjF31.1780\tmRNA\ttaxon:347515\t20150408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1780\tDHCS\t\tGO:0050291\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tF\tSphingosine N-acyltransferase, putative\tLmjF31.1780\tmRNA\ttaxon:347515\t20150408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1780\tDHCS\t\tGO:0061576\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tC\tSphingosine N-acyltransferase, putative\tLmjF31.1780\tmRNA\ttaxon:347515\t20150408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1920\tLmjF.31.1920\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.7580\tC\tRING-variant domain containing protein, putative\tLmjF31.1920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1930\tLmjF.31.1930\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7570\tC\tdihydrouridine synthase (Dus), putative\tLmjF31.1930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1930\tLmjF.31.1930\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7570\tC\tdihydrouridine synthase (Dus), putative\tLmjF31.1930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1930\tLmjF.31.1930\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7570\tC\tdihydrouridine synthase (Dus), putative\tLmjF31.1930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1930\tLmjF.31.1930\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7570\tC\tdihydrouridine synthase (Dus), putative\tLmjF31.1930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1960\tTXN3\t\tGO:0032473\tPMID:20838623\tISO\tGeneDB:LinJ.31.2000\tC\ttryparedoxin 3, putative\tLmjF31.1960\tmRNA\ttaxon:347515\t20140806\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2010\tLmjF.31.2010\t\tGO:0005783\tPMID:27606425\tIDA\t\tC\ttubercidin resistance protein\tLmjF31.2010\tmRNA\ttaxon:347515\t20160911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2080\tLmjF.31.2080\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7560\tC\thypothetical protein, conserved\tLmjF31.2080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2250\tLmjF.31.2250\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7530\tC\t3,2-trans-enoyl-CoA isomerase, mitochondrial precursor, putative\tLmjF31.2250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2260\tLmjF.31.2260\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7520\tC\taminopeptidase, putative\tLmjF31.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2260\tLmjF.31.2260\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7520\tC\taminopeptidase, putative\tLmjF31.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2260\tLmjF.31.2260\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7520\tC\taminopeptidase, putative\tLmjF31.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2310\tLmjF.31.2310\t\tGO:0006196\tPMID:21827749\tISO\tGeneDB:LmxM.30.2310\tP\t3'-nucleotidase/nuclease precursor, putative\tLmjF31.2310\tmRNA\ttaxon:347515\t20110905\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2310\tLmjF.31.2310\t\tGO:0008254\tPMID:21827749\tISO\tGeneDB:LmxM.30.2310\tF\t3'-nucleotidase/nuclease precursor, 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RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2350\tLmjF.31.2350\t\tGO:0000365\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7490\tP\tSymplekin tight junction protein C terminal, putative\tLmjF31.2350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2350\tLmjF.31.2350\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7490\tC\tSymplekin tight junction protein C terminal, putative\tLmjF31.2350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2350\tLmjF.31.2350\t\tGO:0006378\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7490\tP\tSymplekin tight junction protein C terminal, putative\tLmjF31.2350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2360\tLmjF.31.2360\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7480\tC\thypothetical protein, conserved\tLmjF31.2360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2360\tLmjF.31.2360\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7480\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2370\tLmjF.31.2370\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7470\tC\thypothetical protein, conserved\tLmjF31.2370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2390\tLmjF.31.2390\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7460\tC\tmetal-ion transporter, putative\tLmjF31.2390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2390\tLmjF.31.2390\t\tGO:0020022\tGO_REF:0000002\tISO\tGeneDB:TcCLB.511439.50\tC\tmetal-ion 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2600\tLmjF.31.2600\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5010\tC\tcalreticulin, putative\tLmjF31.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2610\tRPOIILS\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.5020\tC\tRNA polymerase ii largest subunit\tLmjF31.2610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2630\tLmjF.31.2630\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.5030\tC\tserine/threonine protein 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2720\tLmjF.31.2720\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7290\tC\tRegulator of chromosome condensation (RCC1) repeat, putative\tLmjF31.2720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2720\tLmjF.31.2720\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7290\tC\tRegulator of chromosome condensation (RCC1) repeat, putative\tLmjF31.2720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", 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"GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2750\tkkt8\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5110\tP\tkinetoplastid kinetochore protein 8, putative\tLmjF31.2750\tmRNA\ttaxon:347515\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2810\tLmjF.31.2810\t\tGO:0060170\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5130\tC\tKH domain/Domain of unknown function (DUF1771)/Smr domain containing protein, putative\tLmjF31.2810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2820\tLmjF.31.2820\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5140\tC\tMaf1 regulator, putative\tLmjF31.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2820\tLmjF.31.2820\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5140\tC\tMaf1 regulator, putative\tLmjF31.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2820\tLmjF.31.2820\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5140\tC\tMaf1 regulator, putative\tLmjF31.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2820\tLmjF.31.2820\t\tGO:0016480\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5140\tP\tMaf1 regulator, putative\tLmjF31.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2820\tLmjF.31.2820\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5140\tC\tMaf1 regulator, putative\tLmjF31.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2820\tLmjF.31.2820\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5140\tC\tMaf1 regulator, putative\tLmjF31.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2830\tLmjF.31.2830\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.5150\tC\thypothetical protein, conserved\tLmjF31.2830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2850\tLmjF.31.2850\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5170\tC\tribosomal protein l7/l12-like protein\tLmjF31.2850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": 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"WARNING", "line": "TriTrypDB\tLmjF.31.2860\tLmjF.31.2860\t\tGO:0000922\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5180\tC\ttousled-like kinase II, putative\tLmjF31.2860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2860\tLmjF.31.2860\t\tGO:0004674\tGO_REF:0000002\tISS\t\tF\ttousled-like kinase II, putative\tLmjF31.2860\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2860\tLmjF.31.2860\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\ttousled-like kinase II, putative\tLmjF31.2860\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2860\tLmjF.31.2860\t\tGO:0005634\tPMID:17940067|GO_REF:0000024\tISO\tGeneDB:Tb927.4.5180|GeneDB:Tb927.8.7220\tC\ttousled-like kinase II, putative\tLmjF31.2860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2860\tLmjF.31.2860\t\tGO:0006260\tPMID:17940067\tISO\tGeneDB:Tb927.8.7220\tP\ttousled-like kinase II, putative\tLmjF31.2860\tmRNA\ttaxon:347515\t20110520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": 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59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2900\tNUP62\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.5200\tC\tNucleoporin NUP62\tLmjF31.2900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2900\tNUP62\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.5200\tC\tNucleoporin NUP62\tLmjF31.2900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2900\tNUP62\t\tGO:0044613\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.5200\tC\tNucleoporin NUP62\tLmjF31.2900\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2905\tLmjF.31.2905\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.5210\tC\thypothetical protein, conserved\tLmjF31.2905\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2920\tLmjF.31.2920\t\tGO:0005829\tPMID:18364711\tRCA\t\tC\tinositol polyphosphate 1-phosphatase, putative\tLmjF31.2920\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2940\tLmjF.31.2940\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.7120\tC\tsqualene synthase, putative\tLmjF31.2940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2940\tLmjF.31.2940\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7120\tC\tsqualene synthase, putative\tLmjF31.2940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2940\tLmjF.31.2940\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7120\tC\tsqualene synthase, putative\tLmjF31.2940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2940\tLmjF.31.2940\t\tGO:0005789\tGO_REF:0000002\tISO\tGeneDB:Tb927.8.7120\tC\tsqualene synthase, putative\tLmjF31.2940\tmRNA\ttaxon:347515\t20100921\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2940\tLmjF.31.2940\t\tGO:0006696\tGO_REF:0000002\tISA\tUniProtKB:FDFT_YEAST\tP\tsqualene synthase, putative\tLmjF31.2940\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2960\tRDK2\t\tGO:0044145\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.5310\tP\tRepressor of differentiation kinase 2, putative\tLmjF31.2960\tmRNA\ttaxon:347515\t20140219\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2970\tACC\t\tGO:0003989\tGO_REF:0000012\tISA\tUniProtKB:Q00955\tF\tacetyl-CoA carboxylase\tLmjF31.2970\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2970\tACC\t\tGO:0004075\tGO_REF:0000011\tISM\tInterPro:IPR000022\tF\tacetyl-CoA carboxylase\tLmjF31.2970\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2970\tACC\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7100\tF\tacetyl-CoA carboxylase\tLmjF31.2970\tmRNA\ttaxon:347515\t20110525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2970\tACC\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7100\tC\tacetyl-CoA carboxylase\tLmjF31.2970\tmRNA\ttaxon:347515\t20110525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2970\tACC\t\tGO:0009343\tGO_REF:0000011\tISM\tInterPro:IPR000022\tC\tacetyl-CoA carboxylase\tLmjF31.2970\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2970\tACC\t\tGO:0009372\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7100\tP\tacetyl-CoA carboxylase\tLmjF31.2970\tmRNA\ttaxon:347515\t20120424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2970\tACC\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.7100\tC\tacetyl-CoA carboxylase\tLmjF31.2970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2970\tACC\t\tGO:0030497\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7100\tP\tacetyl-CoA carboxylase\tLmjF31.2970\tmRNA\ttaxon:347515\t20110525\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3060\tLIT1-1\t\tGO:0005886\tPMID:17000865\tISO\tGeneDB:LmxM.30.3060\tC\tferrous iron transport protein, putative\tLmjF31.3060\tmRNA\ttaxon:347515\t20111108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3060\tLIT1-1\t\tGO:0015093\tPMID:17000865\tISO\tGeneDB:LmxM.30.3060\tF\tferrous iron transport protein, putative\tLmjF31.3060\tmRNA\ttaxon:347515\t20111108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3060\tLIT1-1\t\tGO:0015684\tPMID:17000865\tISO\tGeneDB:LmxM.30.3060\tP\tferrous iron transport protein, putative\tLmjF31.3060\tmRNA\ttaxon:347515\t20111108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3080\tLmjF.31.3080\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.7030\tC\thypothetical protein, conserved\tLmjF31.3080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3090\tLmjF.31.3090\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.7020\tC\tmetallo-peptidase, Clan ME, Family M16\tLmjF31.3090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3090\tLmjF.31.3090\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.7020\tC\tmetallo-peptidase, Clan ME, Family M16\tLmjF31.3090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3105\tATG10\t\tGO:0006914\tPMID:19066473\tIGI\t\tP\tautophagy protein 10\tLmjF31.3105\tmRNA\ttaxon:347515\t20090813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3110\tFAZ14\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6980\tC\tFlagellum attachment zone protein 14\tLmjF31.3110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3130\tLmjF.31.3130\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6970\tC\tmethylcrotonoyl-coa carboxylase biotinylated subunitprotein-like protein\tLmjF31.3130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3130\tLmjF.31.3130\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6970\tC\tmethylcrotonoyl-coa carboxylase biotinylated subunitprotein-like protein\tLmjF31.3130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3140\tLmjF.31.3140\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6960\tC\thypothetical protein, conserved\tLmjF31.3140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3140\tLmjF.31.3140\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6960\tC\thypothetical protein, conserved\tLmjF31.3140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3140\tLmjF.31.3140\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6960\tC\thypothetical protein, conserved\tLmjF31.3140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3145\tLmjF.31.3145\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6950\tC\tdynein-associated protein, putative\tLmjF31.3145\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3145\tLmjF.31.3145\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6950\tC\tdynein-associated protein, putative\tLmjF31.3145\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3150\tLmjF.31.3150\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6940\tC\thypothetical protein, conserved\tLmjF31.3150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3150\tLmjF.31.3150\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.6940\tC\thypothetical protein, conserved\tLmjF31.3150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3160\tNRKB\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6930\tC\tserine/threonine-protein kinase NRKB, putative\tLmjF31.3160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0003723\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tF\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0005844\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tC\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0007088\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tP\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0007126\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tP\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0030529\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tC\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0042175\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tC\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0030\tLmjF.32.0030\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, unknown function\tLmjF32.0030\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0040\tLmjF.32.0040\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, unknown function\tLmjF32.0040\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0050\tSEC13\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14180\tC\tprotein transport protein SEC13\tLmjF32.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0050\tSEC13\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14180\tC\tprotein transport protein SEC13\tLmjF32.0050\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0050\tSEC13\t\tGO:0031080\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14180\tC\tprotein transport protein SEC13\tLmjF32.0050\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0060\tLmjF.32.0060\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14190\tC\thypothetical protein, conserved\tLmjF32.0060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0060\tLmjF.32.0060\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14190\tC\thypothetical protein, conserved\tLmjF32.0060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0070\tLmjF.32.0070\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14200\tC\tQa-SNARE protein\tLmjF32.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0070\tLmjF.32.0070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14200\tC\tQa-SNARE protein\tLmjF32.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0070\tLmjF.32.0070\t\tGO:0005794\tPMID:17026746\tEXP\t\tC\tQa-SNARE protein\tLmjF32.0070\tmRNA\ttaxon:347515\t20090402\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0070\tLmjF.32.0070\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14200\tC\tQa-SNARE protein\tLmjF32.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0080\tNMT\t\tGO:0019107\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14240\tF\tN-myristoyl transferase, putative\tLmjF32.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0090\tLmjF.32.0090\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14250\tC\thypothetical protein, conserved\tLmjF32.0090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0090\tLmjF.32.0090\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14250\tC\thypothetical protein, conserved\tLmjF32.0090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0090\tLmjF.32.0090\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14250\tC\thypothetical protein, conserved\tLmjF32.0090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0110\tLmjF.32.0110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14280\tC\tmitochondrial carrier protein, putative\tLmjF32.0110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0120\tMRK1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14300\tC\tMEKK-related kinase 1, putative\tLmjF32.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0120\tMRK1\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14300\tC\tMEKK-related kinase 1, putative\tLmjF32.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0130\tLmjF.32.0130\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14310\tC\thypothetical protein, conserved\tLmjF32.0130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0140\tFAZ9\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14320\tC\tArmadillo/beta-catenin-like repeat, putative\tLmjF32.0140\tmRNA\ttaxon:347515\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0140\tFAZ9\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14320\tC\tArmadillo/beta-catenin-like repeat, putative\tLmjF32.0140\tmRNA\ttaxon:347515\t20160603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0150\tLmjF.32.0150\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14330\tC\tUtp14 protein, putative\tLmjF32.0150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0150\tLmjF.32.0150\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14330\tC\tUtp14 protein, putative\tLmjF32.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0150\tLmjF.32.0150\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14330\tC\tUtp14 protein, putative\tLmjF32.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0150\tLmjF.32.0150\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14330\tC\tUtp14 protein, putative\tLmjF32.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0165\tLmjF.32.0165\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14350\tC\thypothetical protein, conserved\tLmjF32.0165\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0165\tLmjF.32.0165\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14350\tC\thypothetical protein, conserved\tLmjF32.0165\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0170\tLmjF.32.0170\t\tGO:0003729\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.14360\tF\tU2 small nuclear ribonucleoprotein 40K, putative\tLmjF32.0170\tmRNA\ttaxon:347515\t20130822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0170\tLmjF.32.0170\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14360\tC\tU2 small nuclear ribonucleoprotein 40K, putative\tLmjF32.0170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0170\tLmjF.32.0170\t\tGO:0005686\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.14360\tC\tU2 small nuclear ribonucleoprotein 40K, putative\tLmjF32.0170\tmRNA\ttaxon:347515\t20130822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0180\tLmjF.32.0180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14370\tC\thypothetical protein, conserved\tLmjF32.0180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0180\tLmjF.32.0180\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14370\tC\thypothetical protein, conserved\tLmjF32.0180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0180\tLmjF.32.0180\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14370\tC\thypothetical protein, conserved\tLmjF32.0180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0210\tLmjF.32.0210\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14390\tC\tHistone chaperone Rttp106-like, putative\tLmjF32.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0240\tLmjF.32.0240\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14410\tC\thypothetical protein, conserved\tLmjF32.0240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0260\tNEK16\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14420\tC\tSerine/threonine-protein kinase NEK16, putative\tLmjF32.0260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0260\tNEK16\t\tGO:0097542\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14420\tC\tSerine/threonine-protein kinase NEK16, putative\tLmjF32.0260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0270\tLmjF.32.0270\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14430\tC\thypothetical protein, conserved\tLmjF32.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0280\tb9d1\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14440\tC\tb9 domain-containing protein 1\tLmjF32.0280|mksr1\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0310\tIFT140\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14470\tC\tintraflagellar transport protein 140, putative\tLmjF32.0310\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0310\tIFT140\t\tGO:0035721\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14470\tP\tintraflagellar transport protein 140, putative\tLmjF32.0310\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0310\tIFT140\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14470\tP\tintraflagellar transport protein 140, putative\tLmjF32.0310\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0350\tLmjF.32.0350\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14490\tC\thypothetical protein, conserved\tLmjF32.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0360\tLmjF.32.0360\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14500\tC\thypothetical protein, conserved\tLmjF32.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0370\tLmjF.32.0370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14510\tC\troot hair defective 3 GTP-binding protein (RHD3), putative\tLmjF32.0370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0370\tLmjF.32.0370\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14510\tC\troot hair defective 3 GTP-binding protein (RHD3), putative\tLmjF32.0370\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0380\tLmjF.32.0380\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14520\tC\thypothetical protein, conserved\tLmjF32.0380\tmRNA\ttaxon:347515\t20110223\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0390\tRpn8\t\tGO:0005838\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14530\tC\t19S proteasome non-atpase subunit 8\tLmjF32.0390\tmRNA\ttaxon:347515\t20140919\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0390\tRpn8\t\tGO:0006511\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14530\tP\t19S proteasome non-atpase subunit 8\tLmjF32.0390\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0390\tRpn8\t\tGO:0016049\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14530\tP\t19S proteasome non-atpase subunit 8\tLmjF32.0390\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0400\tHEL67\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14550\tF\tATP-dependent RNA helicase HEL67\tLmjF32.0400|DBP1|VAS\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0400\tHEL67\t\tGO:0005515\tPMID:25294169\tIPI\tGeneDB:LmjF.06.0870\tF\tATP-dependent RNA helicase HEL67\tLmjF32.0400|DBP1|VAS\tmRNA\ttaxon:347515\t20160125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0400\tHEL67\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14550\tC\tATP-dependent RNA helicase HEL67\tLmjF32.0400|DBP1|VAS\tmRNA\ttaxon:347515\t20160622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0400\tHEL67\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14550\tC\tATP-dependent RNA helicase HEL67\tLmjF32.0400|DBP1|VAS\tmRNA\ttaxon:347515\t20160622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0400\tHEL67\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14550\tC\tATP-dependent RNA helicase HEL67\tLmjF32.0400|DBP1|VAS\tmRNA\ttaxon:347515\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0400\tHEL67\t\tGO:0034399\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14550\tC\tATP-dependent RNA helicase HEL67\tLmjF32.0400|DBP1|VAS\tmRNA\ttaxon:347515\t20160622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0400\tHEL67\t\tGO:0097165\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14550\tC\tATP-dependent RNA helicase HEL67\tLmjF32.0400|DBP1|VAS\tmRNA\ttaxon:347515\t20160622\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0430\tLmjF.32.0430\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14580\tC\t60S ribosomal protein L17, putative\tLmjF32.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0430\tLmjF.32.0430\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14580\tC\t60S ribosomal protein L17, putative\tLmjF32.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0440\tLmjF.32.0440\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14590\tC\tProtein of unknown function (DUF1279), putative\tLmjF32.0440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0473\tLmjF.32.0473\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14640\tC\tRtf2 RING-finger, putative\tLmjF32.0473\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0473\tLmjF.32.0473\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14640\tC\tRtf2 RING-finger, putative\tLmjF32.0473\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0480\tLmjF.32.0480\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.14660\tC\thypothetical protein, conserved\tLmjF32.0480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0480\tLmjF.32.0480\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14660\tP\thypothetical protein, conserved\tLmjF32.0480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0510\tLmjF.32.0510\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13770\tC\tLEM3 (ligand-effect modulator 3) family / CDC50 family, putative\tLmjF32.0510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0520\tLmjF.32.0520\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13780\tC\tprofilin, putative\tLmjF32.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0520\tLmjF.32.0520\t\tGO:0007010\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13780\tP\tprofilin, putative\tLmjF32.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0520\tLmjF.32.0520\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13780\tC\tprofilin, putative\tLmjF32.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0520\tLmjF.32.0520\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13780\tC\tprofilin, putative\tLmjF32.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0530\tLmjF.32.0530\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13790\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0570\tLmjF.32.0570\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13810\tC\tATP-dependent DEAD/H RNA helicase, putative\tLmjF32.0570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0610\tLmjF.32.0610\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13850\tC\thypothetical protein, conserved\tLmjF32.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0620\tLmjF.32.0620\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13860\tC\thypothetical protein, conserved\tLmjF32.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0620\tLmjF.32.0620\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13860\tC\thypothetical protein, conserved\tLmjF32.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0620\tLmjF.32.0620\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13860\tC\thypothetical protein, conserved\tLmjF32.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0630\tLmjF.32.0630\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13870\tC\tAmmeMemoRadiSam system protein A/uncharacterized protein, PH0010 family, putative\tLmjF32.0630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0630\tLmjF.32.0630\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13870\tC\tAmmeMemoRadiSam system protein A/uncharacterized protein, PH0010 family, putative\tLmjF32.0630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0640\tLmjF.32.0640\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13880\tC\tphosphatase, putative\tLmjF32.0640\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0650\tLmjF.32.0650\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13890\tC\tAKAP7 2'5' RNA ligase-like domain containing protein, putative\tLmjF32.0650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0670\tLmjF.32.0670\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13910\tC\thypothetical protein, conserved\tLmjF32.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0670\tLmjF.32.0670\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13910\tC\thypothetical protein, conserved\tLmjF32.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0680\tLmjF.32.0680\t\tGO:0005871\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13920\tC\tOSM3-like kinesin, putative\tLmjF32.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0680\tLmjF.32.0680\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13920\tP\tOSM3-like kinesin, putative\tLmjF32.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0690\tLmjF.32.0690\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13930\tC\thypothetical protein, conserved\tLmjF32.0690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0690\tLmjF.32.0690\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.13930\tC\thypothetical protein, conserved\tLmjF32.0690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0700\tLmjF.32.0700\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13940\tC\tubiquitin-conjugating enzyme E2, putative\tLmjF32.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0710\tLmjF.32.0710\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13950\tC\tMut7-C RNAse domain containing protein, putative\tLmjF32.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0720\tLmjF.32.0720\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13970\tP\thypothetical protein, conserved\tLmjF32.0720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0730\tODA7\t\tGO:0044297\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13980\tC\tOuter row dynein-assembly protein 7\tLmjF32.0730\tmRNA\ttaxon:347515\t20150625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0730\tODA7\t\tGO:0044458\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13980\tP\tOuter row dynein-assembly protein 7\tLmjF32.0730\tmRNA\ttaxon:347515\t20150625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0730\tODA7\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13980\tP\tOuter row dynein-assembly protein 7\tLmjF32.0730\tmRNA\ttaxon:347515\t20090527\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0740\tLmjF.32.0740\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14010\tC\thypothetical protein, conserved\tLmjF32.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0750\tNRBD\t\tGO:0003723\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.14000|GeneDB:Tb927.11.14020\tF\tnuclear RNA binding domain\tLmjF32.0750\tmRNA\ttaxon:347515\t20160603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0750\tNRBD\t\tGO:0005634\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.14000|GeneDB:Tb927.11.14020\tC\tnuclear RNA binding domain\tLmjF32.0750\tmRNA\ttaxon:347515\t20160603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0750\tNRBD\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14020\tC\tnuclear RNA binding domain\tLmjF32.0750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0760\tCYC9\t\tGO:1902412\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14030\tP\tcyclin 9, putative\tLmjF32.0760\tmRNA\ttaxon:347515\t20141127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0770\tLmjF.32.0770\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14040\tC\tRIC1, putative\tLmjF32.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0790\tLmjF.32.0790\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14050\tC\thypothetical protein, conserved\tLmjF32.0790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0790\tLmjF.32.0790\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14050\tC\thypothetical protein, conserved\tLmjF32.0790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0790\tLmjF.32.0790\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14050\tC\thypothetical protein, conserved\tLmjF32.0790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0810\tRDK1\t\tGO:0005886\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.14070\tC\tRepressor of differentiation kinase 1, putative\tLmjF32.0810\tmRNA\ttaxon:347515\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0810\tRDK1\t\tGO:0005929\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.14070\tC\tRepressor of differentiation kinase 1, putative\tLmjF32.0810\tmRNA\ttaxon:347515\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0810\tRDK1\t\tGO:0044145\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.14070\tP\tRepressor of differentiation kinase 1, putative\tLmjF32.0810\tmRNA\ttaxon:347515\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0820\tCYC2\t\tGO:0000307\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14080\tC\tCYC2-like cyclin, putative\tLmjF32.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0820\tCYC2\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14080\tC\tCYC2-like cyclin, putative\tLmjF32.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0820\tCYC2\t\tGO:0030332\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14080\tF\tCYC2-like cyclin, putative\tLmjF32.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0840\tLmjF.32.0840\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14090\tF\thypothetical protein, conserved\tLmjF32.0840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0840\tLmjF.32.0840\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14090\tC\thypothetical protein, conserved\tLmjF32.0840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0840\tLmjF.32.0840\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14090\tC\thypothetical protein, conserved\tLmjF32.0840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0850\tDRBD4\t\tGO:0003723\tGO_REF:0000011\tISM\tPfam:PF00076\tF\tpolypyrimidine tract-binding protein, putative\tLmjF32.0850\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0850\tDRBD4\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14100\tF\tpolypyrimidine tract-binding protein, putative\tLmjF32.0850\tmRNA\ttaxon:347515\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0850\tDRBD4\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14100\tC\tpolypyrimidine tract-binding protein, putative\tLmjF32.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0850\tDRBD4\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14100\tC\tpolypyrimidine tract-binding protein, putative\tLmjF32.0850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0850\tDRBD4\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tpolypyrimidine tract-binding protein, putative\tLmjF32.0850\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0850\tDRBD4\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14100\tC\tpolypyrimidine tract-binding protein, putative\tLmjF32.0850\tmRNA\ttaxon:347515\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0850\tDRBD4\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14100\tP\tpolypyrimidine tract-binding protein, putative\tLmjF32.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0860\tLmjF.32.0860\t\tGO:0003700\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14110\tF\thypothetical protein, conserved\tLmjF32.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0860\tLmjF.32.0860\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14110\tC\thypothetical protein, conserved\tLmjF32.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0860\tLmjF.32.0860\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14110\tC\thypothetical protein, conserved\tLmjF32.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0860\tLmjF.32.0860\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14110\tC\thypothetical protein, conserved\tLmjF32.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0870\tLmjF.32.0870\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14120\tC\tphenylalanyl-tRNA synthetase alpha chain, putative\tLmjF32.0870\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0880\tLmjF.32.0880\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14130\tF\t60S ribosomal protein L18a, putative\tLmjF32.0880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0880\tLmjF.32.0880\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14130\tC\t60S ribosomal protein L18a, putative\tLmjF32.0880\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0880\tLmjF.32.0880\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14130\tC\t60S ribosomal protein L18a, putative\tLmjF32.0880\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0890\tECT\t\tGO:0004306\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14140\tF\tethanolamine-phosphate cytidylyltransferase\tLmjF32.0890\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0890\tECT\t\tGO:0046335\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14140\tP\tethanolamine-phosphate cytidylyltransferase\tLmjF32.0890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0890\tECT\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14140\tC\tethanolamine-phosphate cytidylyltransferase\tLmjF32.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0930\tLmjF.32.0930\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14170\tC\tFAD dependent oxidoreductase, putative\tLmjF32.0930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0930\tLmjF.32.0930\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14170\tC\tFAD dependent oxidoreductase, putative\tLmjF32.0930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0950\tLmjF.32.0950\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14190\tF\tStaphylococcal nuclease homologue/Tudor domain containing protein, putative\tLmjF32.0950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0950\tLmjF.32.0950\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14190\tC\tStaphylococcal nuclease homologue/Tudor domain containing protein, putative\tLmjF32.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0950\tLmjF.32.0950\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14190\tC\tStaphylococcal nuclease homologue/Tudor domain containing protein, putative\tLmjF32.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0950\tLmjF.32.0950\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14190\tC\tStaphylococcal nuclease homologue/Tudor domain containing protein, putative\tLmjF32.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0980\tLmjF.32.0980\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14220\tF\thypothetical protein, conserved\tLmjF32.0980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0980\tLmjF.32.0980\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14220\tP\thypothetical protein, conserved\tLmjF32.0980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0990\tLmjF.32.0990\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14240\tC\tWD domain, G-beta repeat, putative\tLmjF32.0990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1000\tLmjF.32.1000\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14250\tC\tchaperonin containing t-complex protein, putative\tLmjF32.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1010\tLmjF.32.1010\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14260\tC\tTyrosine phosphatase family, putative\tLmjF32.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1020\tLmjF.32.1020\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14270\tC\tSTE group serine/threonine-protein kinase, putative\tLmjF32.1020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1050\tLmjF.32.1050\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14290\tC\tvacuolar sorting-like protein\tLmjF32.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1050\tLmjF.32.1050\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14290\tC\tvacuolar sorting-like protein\tLmjF32.1050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1060\tIC70\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:LmxM.31.1060\tC\tDynein intermediate chain, axonemal\tLmjF32.1060\tmRNA\ttaxon:347515\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1060\tIC70\t\tGO:0030286\tGO_REF:0000012\tISA\tUniProtKB:Q13409\tC\tDynein intermediate chain, axonemal\tLmjF32.1060\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1100\tLmjF.32.1100\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14340\tC\texportin 1, putative\tLmjF32.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1100\tLmjF.32.1100\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14340\tC\texportin 1, putative\tLmjF32.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1110\tLmjF.32.1110\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14360\tC\tmitochondrial carrier 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to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1140\tLmjF.32.1140\t\tGO:0005739\tPMID:21474072|GO_REF:0000024\tISO\tGeneDB:Tb927.11.14380|GeneDB:Tb11.01.5980\tC\tkinetoplast polyadenylation/uridylation factor 2, putative\tLmjF32.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1140\tLmjF.32.1140\t\tGO:0006378\tPMID:21474072|GO_REF:0000024\tISO\tGeneDB:Tb927.11.14380|GeneDB:Tb11.01.5980\tP\tkinetoplast polyadenylation/uridylation factor 2, putative\tLmjF32.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1140\tLmjF.32.1140\t\tGO:0031124\tPMID:21474072|GO_REF:0000024\tISO\tGeneDB:Tb927.11.14380|GeneDB:Tb11.01.5980\tP\tkinetoplast polyadenylation/uridylation factor 2, putative\tLmjF32.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1140\tLmjF.32.1140\t\tGO:0043022\tPMID:21474072|GO_REF:0000024\tISO\tGeneDB:Tb927.11.14380|GeneDB:Tb11.01.5980\tF\tkinetoplast polyadenylation/uridylation factor 2, putative\tLmjF32.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1200\tLmjF.32.1200\t\tGO:0004175\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14430\tF\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF32.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1200\tLmjF.32.1200\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14430\tC\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF32.1200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF32.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1210\tLmjF.32.1210\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14440\tC\tpentatricopeptide repeat domain containing protein, putative\tLmjF32.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1210\tLmjF.32.1210\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14440\tC\tpentatricopeptide repeat domain containing protein, putative\tLmjF32.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1210\tLmjF.32.1210\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14440\tC\tpentatricopeptide repeat domain containing protein, putative\tLmjF32.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1230\tLmjF.32.1230\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14460\tC\tADP-ribosylation factor GTPase activating protein 1, putative\tLmjF32.1230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1300\tLmjF.32.1300\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14520\tC\tpolypeptide deformylase-like protein, putative\tLmjF32.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1300\tLmjF.32.1300\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14520\tP\tpolypeptide deformylase-like protein, putative\tLmjF32.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1480\tLmjF.32.1480\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14700\tC\thypothetical protein, conserved\tLmjF32.1480\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1490\tLmjF.32.1490\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14710\tC\trRNA processing, putative\tLmjF32.1490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1490\tLmjF.32.1490\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14710\tC\trRNA processing, putative\tLmjF32.1490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1490\tLmjF.32.1490\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14710\tC\trRNA processing, putative\tLmjF32.1490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1490\tLmjF.32.1490\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14710\tC\trRNA processing, putative\tLmjF32.1490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1490\tLmjF.32.1490\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14710\tC\trRNA processing, putative\tLmjF32.1490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1500\tLmjF.32.1500\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14730\tC\tMetalloprotease M41 FtsH, putative\tLmjF32.1500\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1530\tLmjF.32.1530\t\tGO:0005634\tPMID:18364711\tRCA\t\tC\tNUDIX hydrolase dihydroneopterin triphosphate pyrophosphohydrolase/hydrolase, putative\tLmjF32.1530\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1550\tLmjF.32.1550\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14750\tF\tPSP1 C-terminal conserved region, putative\tLmjF32.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1550\tLmjF.32.1550\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14750\tC\tPSP1 C-terminal conserved region, putative\tLmjF32.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1550\tLmjF.32.1550\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14750\tC\tPSP1 C-terminal conserved region, putative\tLmjF32.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1550\tLmjF.32.1550\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14750\tP\tPSP1 C-terminal conserved region, putative\tLmjF32.1550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1560\tLmjF.32.1560\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14760\tC\tTranslation initiation factor eIF3 subunit 135, putative\tLmjF32.1560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1580\tPMI\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14780\tC\tphosphomannose isomerase\tLmjF32.1580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1580\tPMI\t\tGO:0005737\tPMID:11084042|GO_REF:0000024\tISO\tGeneDB:Tb927.11.14780\tC\tphosphomannose isomerase\tLmjF32.1580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1580\tPMI\t\tGO:0019307\tPMID:11084042\tEXP\t\tP\tphosphomannose isomerase\tLmjF32.1580\tmRNA\ttaxon:347515\t20090529\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1580\tPMI\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14780\tC\tphosphomannose isomerase\tLmjF32.1580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1580\tPMI\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14780\tC\tphosphomannose isomerase\tLmjF32.1580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1590\tLmjF.32.1590\t\tGO:0000287\tPMID:19646907\tIC\t\tF\tDNA repair and recombination protein, mitochondrial precursor, putative\tLmjF32.1590\tpseudogenic_transcript\ttaxon:347515\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1590\tLmjF.32.1590\t\tGO:0004003\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.11.14790\tF\tDNA repair and recombination protein, mitochondrial precursor, putative\tLmjF32.1590\tpseudogenic_transcript\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1590\tLmjF.32.1590\t\tGO:0005524\tPMID:19646907\tIC\t\tF\tDNA repair and recombination protein, mitochondrial precursor, putative\tLmjF32.1590\tpseudogenic_transcript\ttaxon:347515\t20110829\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1590\tLmjF.32.1590\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14790\tC\tDNA repair and recombination protein, mitochondrial precursor, putative\tLmjF32.1590\tpseudogenic_transcript\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1590\tLmjF.32.1590\t\tGO:0005739\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.11.14790\tC\tDNA repair and recombination protein, mitochondrial precursor, putative\tLmjF32.1590\tpseudogenic_transcript\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1610\tLmjF.32.1610\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14810\tC\thypothetical protein, conserved\tLmjF32.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1610\tLmjF.32.1610\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14810\tC\thypothetical protein, conserved\tLmjF32.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1610\tLmjF.32.1610\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14810\tC\thypothetical protein, conserved\tLmjF32.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1610\tLmjF.32.1610\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14810\tC\thypothetical protein, conserved\tLmjF32.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1620\tLmjF.32.1620\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14820\tC\thypothetical protein, conserved\tLmjF32.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1635\tLmjF.32.1635\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14830\tC\thypothetical protein, conserved\tLmjF32.1635\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1635\tLmjF.32.1635\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14830\tC\thypothetical protein, conserved\tLmjF32.1635\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1635\tLmjF.32.1635\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14830\tC\thypothetical protein, conserved\tLmjF32.1635\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1635\tLmjF.32.1635\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14830\tC\thypothetical protein, conserved\tLmjF32.1635\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1640\tCPC2\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14840\tP\tchromosomal passenger complex 2\tLmjF32.1640|PNT2\tmRNA\ttaxon:347515\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1640\tCPC2\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14840\tC\tchromosomal passenger complex 2\tLmjF32.1640|PNT2\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1640\tCPC2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14840\tC\tchromosomal passenger complex 2\tLmjF32.1640|PNT2\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1640\tCPC2\t\tGO:0005876\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14840\tC\tchromosomal passenger complex 2\tLmjF32.1640|PNT2\tmRNA\ttaxon:347515\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1640\tCPC2\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14840\tP\tchromosomal passenger complex 2\tLmjF32.1640|PNT2\tmRNA\ttaxon:347515\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1640\tCPC2\t\tGO:0032133\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14840\tC\tchromosomal passenger complex 2\tLmjF32.1640|PNT2\tmRNA\ttaxon:347515\t20100127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1640\tCPC2\t\tGO:0033047\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14840\tP\tchromosomal passenger complex 2\tLmjF32.1640|PNT2\tmRNA\ttaxon:347515\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1640\tCPC2\t\tGO:0051225\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14840\tP\tchromosomal passenger complex 2\tLmjF32.1640|PNT2\tmRNA\ttaxon:347515\t20170605\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1650\tLmjF.32.1650\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14850\tC\thypothetical protein, conserved\tLmjF32.1650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1660\tLmjF.32.1660\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14860\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1660\tLmjF.32.1660\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14860\tC\thypothetical protein, conserved\tLmjF32.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1660\tLmjF.32.1660\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14860\tC\thypothetical protein, conserved\tLmjF32.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1670\tLmjF.32.1670\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14870\tC\tNAD+ synthase, putative\tLmjF32.1670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1670\tLmjF.32.1670\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14870\tC\tNAD+ synthase, putative\tLmjF32.1670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1680\tPFC9\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14880\tC\tParaflagellar Rod Proteome Component 9, putative\tLmjF32.1680\tmRNA\ttaxon:347515\t20150511\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1680\tPFC9\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14880\tP\tParaflagellar Rod Proteome Component 9, putative\tLmjF32.1680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1690\tLmjF.32.1690\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14910\tC\tprotein phosphatase 2C, putative\tLmjF32.1690\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1710\tLmjF.32.1710\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14940\tC\thypothetical protein, conserved\tLmjF32.1710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1720\tLmjF.32.1720\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14890\tC\tDNA polymerase alpha/epsilon subunit B, putative\tLmjF32.1720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1720\tLmjF.32.1720\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14890\tC\tDNA polymerase alpha/epsilon subunit B, putative\tLmjF32.1720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1730\tCOPE\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14900\tC\tcoatomer subunit epsilon\tLmjF32.1730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1740\tLmjF.32.1740\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger protein 2, putative\tLmjF32.1740\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1740\tLmjF.32.1740\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14950\tF\tzinc finger protein 2, putative\tLmjF32.1740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1740\tLmjF.32.1740\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14950\tC\tzinc finger protein 2, putative\tLmjF32.1740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1740\tLmjF.32.1740\t\tGO:0030154\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14950\tP\tzinc finger protein 2, putative\tLmjF32.1740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1750\tPUF7\t\tGO:0003723\tGO_REF:0000002\tISM\tInterPro:IPR001313\tF\tpumilio/PUF RNA binding protein 7, putative\tLmjF32.1750\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1750\tPUF7\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14960\tC\tpumilio/PUF RNA binding protein 7, putative\tLmjF32.1750\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1750\tPUF7\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14960\tC\tpumilio/PUF RNA binding protein 7, putative\tLmjF32.1750\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1750\tPUF7\t\tGO:0005730\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.14960\tC\tpumilio/PUF RNA binding protein 7, putative\tLmjF32.1750\tmRNA\ttaxon:347515\t20100610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1750\tPUF7\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14960\tC\tpumilio/PUF RNA binding protein 7, putative\tLmjF32.1750\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1750\tPUF7\t\tGO:0006364\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.14960\tP\tpumilio/PUF RNA binding protein 7, putative\tLmjF32.1750\tmRNA\ttaxon:347515\t20100610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1750\tPUF7\t\tGO:0016071\tGO_REF:0000002\tISS\t\tP\tpumilio/PUF RNA binding protein 7, putative\tLmjF32.1750\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1750\tPUF7\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.14960\tC\tpumilio/PUF RNA binding protein 7, putative\tLmjF32.1750\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1770\tLmjF.32.1770\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14980\tC\tphosphatidylethanolamine-binding protein, putative\tLmjF32.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1770\tLmjF.32.1770\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14980\tC\tphosphatidylethanolamine-binding protein, putative\tLmjF32.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1770\tLmjF.32.1770\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14980\tC\tphosphatidylethanolamine-binding protein, putative\tLmjF32.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1790\tLmjF.32.1790\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14990\tC\thypothetical protein, conserved\tLmjF32.1790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1790\tLmjF.32.1790\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14990\tC\thypothetical protein, conserved\tLmjF32.1790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1790\tLmjF.32.1790\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.14990\tC\thypothetical protein, conserved\tLmjF32.1790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1802\tLmjF.32.1802\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15000\tC\thypothetical protein, conserved\tLmjF32.1802\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1802\tLmjF.32.1802\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15000\tC\thypothetical protein, conserved\tLmjF32.1802\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1802\tLmjF.32.1802\t\tGO:0008380\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15000\tP\thypothetical protein, conserved\tLmjF32.1802\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1802\tLmjF.32.1802\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15000\tP\thypothetical protein, conserved\tLmjF32.1802\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1810\tNEK21\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15010\tC\tSerine/threonine-protein kinase NEK21, putative\tLmjF32.1810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1810\tNEK21\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15010\tC\tSerine/threonine-protein kinase NEK21, putative\tLmjF32.1810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1820\tSODB1\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15020\tC\tiron superoxide dismutase, putative\tLmjF32.1820\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1830\tSODB2\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15020\tC\tiron superoxide dismutase, putative\tLmjF32.1830\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1840\tLmjF.32.1840\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15030\tC\trab11B GTPase, putative\tLmjF32.1840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1840\tLmjF.32.1840\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15030\tC\trab11B GTPase, putative\tLmjF32.1840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1850\tHSP60\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15040\tC\theat shock protein 60\tLmjF32.1850|Cpn60\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1870\tLmjF.32.1870\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15050\tC\tCation efflux family, putative\tLmjF32.1870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1870\tLmjF.32.1870\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15050\tC\tCation efflux family, putative\tLmjF32.1870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1890\tLmjF.32.1890\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15070\tC\thypothetical protein, conserved\tLmjF32.1890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1890\tLmjF.32.1890\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15070\tC\thypothetical protein, conserved\tLmjF32.1890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1910\tLmjF.32.1910\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15100\tP\thypothetical protein, conserved\tLmjF32.1910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1920\tLmjF.32.1920\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15110\tC\tVitamin B6 photo-protection and homoeostasis, putative\tLmjF32.1920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1920\tLmjF.32.1920\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15110\tC\tVitamin B6 photo-protection and homoeostasis, putative\tLmjF32.1920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1940\tJ7\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15130\tP\theat shock protein-like protein, putative\tLmjF32.1940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1960\tLmjF.32.1960\t\tGO:0003841\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.11.15150|InterPro:IPR002123\tF\t1-acyl-sn-glycerol-3-phosphateacyltransferase-like protein, putative\tLmjF32.1960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1960\tLmjF.32.1960\t\tGO:0008152\tGO_REF:0000002\tISS\t\tP\t1-acyl-sn-glycerol-3-phosphateacyltransferase-like protein, putative\tLmjF32.1960\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1960\tLmjF.32.1960\t\tGO:0016021\tPMID:11152613\tISS\t\tC\t1-acyl-sn-glycerol-3-phosphateacyltransferase-like protein, putative\tLmjF32.1960\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1970\ttsr3\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15170\tC\tribosome biogenesis protein TSR3, putative\tLmjF32.1970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1970\ttsr3\t\tGO:0030490\tGO_REF:0000002\tISS\tUniProtKB:TSR3_YEAST\tP\tribosome biogenesis protein TSR3, putative\tLmjF32.1970\tmRNA\ttaxon:347515\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1970\ttsr3\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15170\tC\tribosome biogenesis protein TSR3, putative\tLmjF32.1970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1970\ttsr3\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15170\tC\tribosome biogenesis protein TSR3, putative\tLmjF32.1970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1975\tLmjF.32.1975\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15180\tC\thypothetical protein, conserved\tLmjF32.1975\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1975\tLmjF.32.1975\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15180\tC\thypothetical protein, conserved\tLmjF32.1975\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1980\tLmjF.32.1980\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15190\tC\tDomain of unknown function (DUF4200), putative\tLmjF32.1980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1980\tLmjF.32.1980\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15190\tC\tDomain of unknown function (DUF4200), putative\tLmjF32.1980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1990\tLmjF.32.1990\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15200\tC\thypothetical protein, conserved\tLmjF32.1990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1990\tLmjF.32.1990\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15200\tC\thypothetical protein, conserved\tLmjF32.1990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1990\tLmjF.32.1990\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15200\tC\thypothetical protein, conserved\tLmjF32.1990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2000\tESP16\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15210\tC\tEnriched in surface-labeled proteome protein 16\tLmjF32.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2000\tESP16\tNOT\tGO:0009986\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15210\tC\tEnriched in surface-labeled proteome protein 16\tLmjF32.2000\tmRNA\ttaxon:347515\t20150730\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2010\tLmjF.32.2010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15220\tC\thypothetical protein, conserved\tLmjF32.2010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2010\tLmjF.32.2010\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15220\tC\thypothetical protein, conserved\tLmjF32.2010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2020\tLmjF.32.2020\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15230\tC\tcop-coated vesicle membrane protein p24 precursor, putative\tLmjF32.2020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2020\tLmjF.32.2020\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15230\tC\tcop-coated vesicle membrane protein p24 precursor, putative\tLmjF32.2020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2030\tRAB2B\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15240\tC\tRas-related protein RAB2B, putative\tLmjF32.2030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2070\tPPAT\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15270\tC\tcytidylyltransferase, putative\tLmjF32.2070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2070\tPPAT\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15270\tC\tcytidylyltransferase, putative\tLmjF32.2070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2070\tPPAT\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15270\tC\tcytidylyltransferase, putative\tLmjF32.2070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2070\tPPAT\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15270\tC\tcytidylyltransferase, putative\tLmjF32.2070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2080\tLmjF.32.2080\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15280\tC\tCytidine and deoxycytidylate deaminase zinc-binding region, putative\tLmjF32.2080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2080\tLmjF.32.2080\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15280\tC\tCytidine and deoxycytidylate deaminase zinc-binding region, putative\tLmjF32.2080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2090\tLmjF.32.2090\t\tGO:0005737\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.15290\tC\teRF1 methyltransferase catalytic subunit, putative\tLmjF32.2090\tmRNA\ttaxon:347515\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2090\tLmjF.32.2090\t\tGO:0006417\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.15290\tP\teRF1 methyltransferase catalytic subunit, putative\tLmjF32.2090\tmRNA\ttaxon:347515\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2090\tLmjF.32.2090\t\tGO:0008276\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.15290\tF\teRF1 methyltransferase catalytic subunit, putative\tLmjF32.2090\tmRNA\ttaxon:347515\t20120816\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2130\tLmjF.32.2130\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15350\tC\tRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF32.2130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2130\tLmjF.32.2130\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15350\tC\tRNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative\tLmjF32.2130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2140\tLmjF.32.2140\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15360\tC\thypothetical protein, conserved\tLmjF32.2140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2160\tLmjF.32.2160\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15400\tC\tR-SNARE protein, putative\tLmjF32.2160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2160\tLmjF.32.2160\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15400\tC\tR-SNARE protein, putative\tLmjF32.2160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2170\tLmjF.32.2170\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15410\tC\thypothetical protein, conserved\tLmjF32.2170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2180\tEIF3K\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15420\tC\teukaryotic translation initiation factor 3 subunit k\tLmjF32.2180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2180\tEIF3K\t\tGO:0005737\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\teukaryotic translation initiation factor 3 subunit k\tLmjF32.2180\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2180\tEIF3K\t\tGO:0005852\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\teukaryotic translation initiation factor 3 subunit k\tLmjF32.2180\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2200\tLmjF.32.2200\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15430\tC\tU5 small nuclear ribonucleoprotein component, putative\tLmjF32.2200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2200\tLmjF.32.2200\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15430\tC\tU5 small nuclear ribonucleoprotein component, putative\tLmjF32.2200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2210\tTAP151\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF32.2210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2210\tTAP151\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF32.2210\tmRNA\ttaxon:347515\t20141210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2220\tLmjF.32.2220\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15450\tC\thypothetical protein, unknown function\tLmjF32.2220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2230\tLmjF.32.2230\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15460\tC\tATP-dependent RNA helicase, putative\tLmjF32.2230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2240\tLmjF.32.2240\t\tGO:0004479\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15470\tF\tmethionyl-tRNA formyltransferase, putative\tLmjF32.2240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2240\tLmjF.32.2240\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15470\tC\tmethionyl-tRNA formyltransferase, putative\tLmjF32.2240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2240\tLmjF.32.2240\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15470\tC\tmethionyl-tRNA formyltransferase, putative\tLmjF32.2240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2260\tACDP\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15480\tC\theat shock protein Hsp20, putative\tLmjF32.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2260\tACDP\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15480\tC\theat shock protein Hsp20, putative\tLmjF32.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2260\tACDP\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15480\tC\theat shock protein Hsp20, putative\tLmjF32.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2270\tLmjF.32.2270\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15490\tC\tmembrane associated protein-like protein\tLmjF32.2270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2270\tLmjF.32.2270\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15490\tC\tmembrane associated protein-like protein\tLmjF32.2270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2280\tLmjF.32.2280\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15500\tC\thypothetical protein, conserved\tLmjF32.2280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2290\tLmjF.32.2290\t\tGO:0005783\tPMID:18364711\tRCA\t\tC\tsphingosine-1-phosphate phosphatase, putative\tLmjF32.2290\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2290\tLmjF.32.2290\t\tGO:0042392\tPMID:18364711\tRCA\t\tF\tsphingosine-1-phosphate phosphatase, putative\tLmjF32.2290\tmRNA\ttaxon:347515\t20100823\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2320\tLmjF.32.2320\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15530\tC\tC-14 sterol reductase, putative\tLmjF32.2320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2320\tLmjF.32.2320\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15530\tC\tC-14 sterol reductase, putative\tLmjF32.2320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2330\tLmjF.32.2330\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15540\tC\thypothetical protein, conserved\tLmjF32.2330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2340\tLmjF.32.2340\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15550\tC\tcytochrome-b5 reductase, putative\tLmjF32.2340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2350\tNUP53a\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15560\tC\tNsp1-like C-terminal region, putative\tLmjF32.2350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2350\tNUP53a\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15560\tC\tNsp1-like C-terminal region, putative\tLmjF32.2350\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2350\tNUP53a\t\tGO:0044613\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15560\tC\tNsp1-like C-terminal region, putative\tLmjF32.2350\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2400\tLmjF.32.2400\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15590\tC\thypothetical protein, conserved\tLmjF32.2400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2400\tLmjF.32.2400\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15590\tC\thypothetical protein, conserved\tLmjF32.2400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2400\tLmjF.32.2400\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15590\tC\thypothetical protein, conserved\tLmjF32.2400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2420\tLmjF.32.2420\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15620\tC\thypothetical protein, conserved\tLmjF32.2420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2430\tLmjF.32.2430\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15630\tC\tNOL1/NOP2/sun family, putative\tLmjF32.2430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2580\tLmjF.32.2580\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15770\tC\thypothetical protein, conserved\tLmjF32.2580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2590\tLmjF.32.2590\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15780\tC\thypothetical protein, conserved\tLmjF32.2590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2590\tLmjF.32.2590\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15780\tC\thypothetical protein, conserved\tLmjF32.2590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2610\tTOEFAZ1\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15800\tP\tTip Of Extending FAZ protein 1\tLmjF32.2610|CIF1\tmRNA\ttaxon:347515\t20160713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2610\tTOEFAZ1\t\tGO:0045184\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15800\tP\tTip Of Extending FAZ protein 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2620\tLmjF.32.2620\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15810\tC\tComplex1_LYR-like, putative\tLmjF32.2620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2620\tLmjF.32.2620\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15810\tC\tComplex1_LYR-like, putative\tLmjF32.2620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2630\tLmjF.32.2630\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15820\tC\tsuperoxide dismutase, 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59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2640\tCD\t\tGO:0019148\tPMID:20541568\tIDA\t\tF\tcysteine desulfhydrase\tLmjF32.2640\tmRNA\ttaxon:347515\t20100623\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2640\tCD\t\tGO:0070814\tPMID:20541568\tIDA\t\tP\tcysteine desulfhydrase\tLmjF32.2640\tmRNA\ttaxon:347515\t20100623\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2640\tCD\t\tGO:0009093\tPMID:20541568\tIDA\t\tP\tcysteine desulfhydrase\tLmjF32.2640\tmRNA\ttaxon:347515\t20100623\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2640\tCD\t\tGO:0019148\tPMID:20541568\tIDA\t\tF\tcysteine desulfhydrase\tLmjF32.2640\tmRNA\ttaxon:347515\t20100623\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2640\tCD\t\tGO:0070814\tPMID:20541568\tIDA\t\tP\tcysteine desulfhydrase\tLmjF32.2640\tmRNA\ttaxon:347515\t20100623\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2650\tLmjF.32.2650\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15830\tC\tSpoU rRNA Methylase family, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2660\tAAT16\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15860\tC\tL-Lysine transport protein, putative\tLmjF32.2660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2660\tAAT16\t\tGO:0005886\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tC\tL-Lysine transport protein, putative\tLmjF32.2660\tmRNA\ttaxon:347515\t20110307\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2660\tAAT16\t\tGO:0015189\tPMID:21170560\tISO\tGeneDB:LinJ.32.2800\tF\tL-Lysine transport protein, 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Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2690\tLmjF.32.2690\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15880\tC\tribosomal protein L27, putative\tLmjF32.2690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2690\tLmjF.32.2690\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15900\tC\tribosomal protein L27, putative\tLmjF32.2690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2720\tLmjF.32.2720\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15930\tC\tSybindin-like family, putative\tLmjF32.2720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2720\tLmjF.32.2720\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15930\tC\tSybindin-like family, putative\tLmjF32.2720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2720\tLmjF.32.2720\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15930\tC\tSybindin-like family, putative\tLmjF32.2720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2730\tLmjF.32.2730\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15940\tC\thypothetical protein, conserved\tLmjF32.2730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2740\tACR2\t\tGO:0030611\tPMID:15220340\tIDA\t\tF\tAs/Sb Reductase\tLmjF32.2740\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2750\tLmjF.32.2750\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15970\tC\tGuanine nucleotide exchange factor in Golgi transport N-terminal/Sec7 domain containing protein, putative\tLmjF32.2750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2750\tLmjF.32.2750\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.15970\tC\tGuanine nucleotide exchange factor in Golgi transport N-terminal/Sec7 domain containing protein, putative\tLmjF32.2750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to 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RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2790\tLmjF.32.2790\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16000\tC\tDNA polymerase III epsilon subunit-like exonuclease\tLmjF32.2790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2800\tLmjF.32.2800\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16010\tC\thypothetical protein, conserved\tLmjF32.2800\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF32.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2820\tLmjF.32.2820\t\tGO:0005838\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16030\tC\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF32.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2820\tLmjF.32.2820\t\tGO:0006511\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16030\tP\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF32.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2840\tLmjF.32.2840\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16040\tC\tprefoldin subunit, putative\tLmjF32.2840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2850\tDYX1C1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16050\tC\tCS domain/TPR repeat/Tetratricopeptide repeat, putative\tLmjF32.2850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2960\tLmjF.32.2960\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16140\tC\tDNA replication licensing factor MCM7, putative\tLmjF32.2960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2960\tLmjF.32.2960\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16140\tC\tDNA replication licensing factor MCM7, putative\tLmjF32.2960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF32.2960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2960\tLmjF.32.2960\t\tGO:0044786\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16140\tP\tDNA replication licensing factor MCM7, putative\tLmjF32.2960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2960\tLmjF.32.2960\t\tGO:0071162\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16140\tC\tDNA replication licensing factor MCM7, putative\tLmjF32.2960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2980\tLmjF.32.2980\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16160\tC\tATP binding protein-like protein\tLmjF32.2980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2985\tLmjF.32.2985\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16170\tC\thypothetical protein, conserved\tLmjF32.2985\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2995\tLmjF.32.2995\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.17010\tC\tRab5-interacting protein (Rab5ip), putative\tLmjF32.2995\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3010\tLmjF.32.3010\t\tGO:0000910\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.17000\tP\tleucine-rich repeat protein, putative\tLmjF32.3010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3010\tLmjF.32.3010\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.17000\tC\tleucine-rich repeat protein, putative\tLmjF32.3010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3020\tLmjF.32.3020\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16990\tC\t50S ribosome-binding GTPase, putative\tLmjF32.3020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3030\tJ1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16980\tC\tchaperone protein DnaJ, putative\tLmjF32.3030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3040\tLmjF.32.3040\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16970\tC\tprotein phosphatase 4, putative\tLmjF32.3040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3065\tLmjF.32.3065\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16950\tC\thypothetical protein, conserved\tLmjF32.3065\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3065\tLmjF.32.3065\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16950\tC\thypothetical protein, conserved\tLmjF32.3065\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3065\tLmjF.32.3065\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16950\tC\thypothetical protein, conserved\tLmjF32.3065\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3070\tLmjF.32.3070\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16940\tC\tMIZ/SP-RING zinc finger, putative\tLmjF32.3070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3080\tABCB3\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16930\tC\tATP-binding cassette protein subfamily B, member 3, putative\tLmjF32.3080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3110\tLmjF.32.3110\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16910\tC\tSerine hydrolase (FSH1)/50S ribosome-binding GTPase/GTPase of unknown function C-terminal, putative\tLmjF32.3110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3150\tFLAM7\t\tGO:0031514\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16890\tC\tFlagellar Member 7\tLmjF32.3150\tmRNA\ttaxon:347515\t20150813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3160\tLmjF.32.3160\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16880\tC\tLeucine Rich repeats (2 copies), putative\tLmjF32.3160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3170\tLmjF.32.3170\t\tGO:0005739\tPMID:18073385|GO_REF:0000024\tISO\tGeneDB:Tb927.11.16870\tC\tNADH dehydrogenase subunit NI8M, putative\tLmjF32.3170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3170\tLmjF.32.3170\t\tGO:0006120\tPMID:18534909\tISS\t\tP\tNADH dehydrogenase subunit NI8M, putative\tLmjF32.3170\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3170\tLmjF.32.3170\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16870\tC\tNADH dehydrogenase subunit NI8M, putative\tLmjF32.3170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3170\tLmjF.32.3170\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16870\tC\tNADH dehydrogenase subunit NI8M, putative\tLmjF32.3170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3180\tLmjF.32.3180\t\tGO:0003723\tPMID:21451155|GO_REF:0000024\tISO\tGeneDB:Tb927.11.16860\tF\tmitochondrial RNA binding protein, putative\tLmjF32.3180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3180\tLmjF.32.3180\t\tGO:0016070\tPMID:21451155|GO_REF:0000024\tISO\tGeneDB:Tb927.11.16860\tP\tmitochondrial RNA binding protein, putative\tLmjF32.3180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3190\tLmjF.32.3190\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16850\tC\tGolgi transport complex subunit 5, putative\tLmjF32.3190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3210\tLmjF.32.3210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16830\tC\tMiro-like protein, putative\tLmjF32.3210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3210\tLmjF.32.3210\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16830\tC\tMiro-like protein, putative\tLmjF32.3210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3210\tLmjF.32.3210\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16830\tC\tMiro-like protein, putative\tLmjF32.3210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3210\tLmjF.32.3210\t\tGO:0060271\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16830\tP\tMiro-like protein, putative\tLmjF32.3210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3230\tLmjF.32.3230\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16810\tC\tdynein light intermediate chain, putative\tLmjF32.3230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3250\tMPK6\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16790\tC\tmitogen-activated protein kinase, putative\tLmjF32.3250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3260\tLmjF.32.3260\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16770\tC\tglucosamine-6-phosphate isomerase, putative\tLmjF32.3260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3260\tLmjF.32.3260\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16770\tC\tglucosamine-6-phosphate isomerase, putative\tLmjF32.3260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3260\tLmjF.32.3260\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16770\tC\tglucosamine-6-phosphate isomerase, putative\tLmjF32.3260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3270\tLmjF.32.3270\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16760\tC\tchaperonin alpha subunit, putative\tLmjF32.3270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3270\tLmjF.32.3270\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16760\tC\tchaperonin alpha subunit, putative\tLmjF32.3270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3290\tLmjF.32.3290\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16750\tC\thypothetical protein, conserved\tLmjF32.3290\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3300\tJ45\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16740\tC\tchaperone protein DnaJ, putative\tLmjF32.3300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3300\tJ45\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16740\tC\tchaperone protein DnaJ, putative\tLmjF32.3300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3310\tGCVL-2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16730\tC\tdihydrolipoamide dehydrogenase, putative\tLmjF32.3310\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3310\tGCVL-2\t\tGO:0005739\tPMID:16823982|GO_REF:0000024\tISO\tGeneDB:Tb927.11.16730|GeneDB:LinJ.32.3510\tC\tdihydrolipoamide dehydrogenase, putative\tLmjF32.3310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3320\tCYC6\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16720\tP\tcyclin 6, putative\tLmjF32.3320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3320\tCYC6\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16720\tC\tcyclin 6, putative\tLmjF32.3320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3320\tCYC6\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16720\tC\tcyclin 6, putative\tLmjF32.3320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3320\tCYC6\t\tGO:0019908\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16720\tC\tcyclin 6, putative\tLmjF32.3320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3320\tCYC6\t\tGO:0090307\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16720\tP\tcyclin 6, putative\tLmjF32.3320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3330\tLmjF.32.3330\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16710\tC\thypothetical protein, conserved\tLmjF32.3330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3370\tLmjF.32.3370\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16690\tC\tchloride channel protein, putative\tLmjF32.3370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3760\tLmjF.32.3760\t\tGO:0005829\tPMID:18364711\tISO\tGeneDB:LmjF.32.3760\tC\tenolase, putative\tLmjF32.3760\tmRNA\ttaxon:347515\t20100824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3760\tLmjF.32.3760\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16410\tC\tenolase, putative\tLmjF32.3760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3780\tKAP3\t\tGO:0003677\tGO_REF:0000002\tISO\tGeneDB:TcCLB.511029.20\tF\tkinetoplast-associated protein 3, putative\tLmjF32.3780\tmRNA\ttaxon:347515\t20100908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3780\tKAP3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16400\tC\tkinetoplast-associated protein 3, putative\tLmjF32.3780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3780\tKAP3\t\tGO:0005759\tGO_REF:0000002\tISO\tGeneDB:TcCLB.511029.20\tC\tkinetoplast-associated protein 3, putative\tLmjF32.3780\tmRNA\ttaxon:347515\t20100908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3780\tKAP3\t\tGO:0006323\tGO_REF:0000002\tISO\tGeneDB:TcCLB.511029.20\tP\tkinetoplast-associated protein 3, putative\tLmjF32.3780\tmRNA\ttaxon:347515\t20100908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3780\tKAP3\t\tGO:0020023\tGO_REF:0000002\tISO\tGeneDB:TcCLB.511029.20\tC\tkinetoplast-associated protein 3, putative\tLmjF32.3780\tmRNA\ttaxon:347515\t20100908\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3790\tCKS1\t\tGO:0000278\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16390\tP\tcyclin-dependent kinase regulatory subunit\tLmjF32.3790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3790\tCKS1\t\tGO:0004693\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16390\tF\tcyclin-dependent kinase regulatory subunit\tLmjF32.3790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3810\tLmjF.32.3810\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16370\tC\tSHQ1 protein, putative\tLmjF32.3810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3810\tLmjF.32.3810\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16370\tC\tSHQ1 protein, putative\tLmjF32.3810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3810\tLmjF.32.3810\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16370\tC\tSHQ1 protein, putative\tLmjF32.3810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3830\tLmjF.32.3830\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16350\tC\thypothetical protein, conserved\tLmjF32.3830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3830\tLmjF.32.3830\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16350\tP\thypothetical protein, conserved\tLmjF32.3830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3830\tLmjF.32.3830\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16350\tC\thypothetical protein, conserved\tLmjF32.3830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3830\tLmjF.32.3830\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16350\tC\thypothetical protein, conserved\tLmjF32.3830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3860\tLmjF.32.3860\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16330\tC\thypothetical protein, conserved\tLmjF32.3860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3870\tMYO13\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001609\tF\tmyosin XXI, putative\tLmjF32.3870\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3870\tMYO13\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LdBPK_324020.1\tC\tmyosin XXI, putative\tLmjF32.3870\tmRNA\ttaxon:347515\t20150311\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3870\tMYO13\t\tGO:0016459\tGO_REF:0000011\tISM\tInterPro:IPR001609\tC\tmyosin XXI, putative\tLmjF32.3870\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3880\tLmjF.32.3880\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16300\tC\thypothetical protein, conserved\tLmjF32.3880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3890\tATG4.1\t\tGO:0006914\tPMID:19066473\tIGI\t\tP\tAUT2/APG4/ATG4 cysteine peptidase, putative\tLmjF32.3890\tmRNA\ttaxon:347515\t20090812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3890\tATG4.1\t\tGO:0008234\tPMID:19066473\tEXP\t\tF\tAUT2/APG4/ATG4 cysteine peptidase, putative\tLmjF32.3890\tmRNA\ttaxon:347515\t20090812\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3890\tATG4.1\t\tGO:0016485\tPMID:19066473\tIGI\t\tP\tAUT2/APG4/ATG4 cysteine peptidase, putative\tLmjF32.3890\tmRNA\ttaxon:347515\t20140602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3900\tLmjF.32.3900\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16280\tC\t60S ribosomal protein L2, putative\tLmjF32.3900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3920\tLmjF.32.3920\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16270\tC\tDNA repair helicase and transcription factor protein, putative\tLmjF32.3920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3930\tLmjF.32.3930\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.16260\tC\tSPRY domain/HECT-domain (ubiquitin-transferase), putative\tLmjF32.3930\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3940\tLmjF.32.3940\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16250\tC\thypothetical protein, conserved\tLmjF32.3940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3950\tLmjF.32.3950\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16230\tC\thypothetical protein, conserved\tLmjF32.3950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3950\tLmjF.32.3950\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16230\tC\thypothetical protein, conserved\tLmjF32.3950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3950\tLmjF.32.3950\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16230\tC\thypothetical protein, conserved\tLmjF32.3950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3960\tLmjF.32.3960\t\tGO:0005750\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16220\tC\thypothetical protein, conserved\tLmjF32.3960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3970\tCARP1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16210\tC\tcAMP response protein 1, putative\tLmjF32.3970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3970\tCARP1\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP response protein 1, putative\tLmjF32.3970\tmRNA\ttaxon:347515\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3970\tCARP1\t\tGO:0030552\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508523.80\tF\tcAMP response protein 1, putative\tLmjF32.3970\tmRNA\ttaxon:347515\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3970\tCARP1\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16210\tP\tcAMP response protein 1, putative\tLmjF32.3970\tmRNA\ttaxon:347515\t20130830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0010\tLmjF.33.0010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4040\tC\thypothetical protein, conserved\tLmjF33.0010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0010\tLmjF.33.0010\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4040\tC\thypothetical protein, conserved\tLmjF33.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0030\tppl1\t\tGO:0003887\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.4070\tF\tPrimPol-like protein 1, putative\tLmjF33.0030\tmRNA\ttaxon:347515\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0030\tppl1\t\tGO:0003896\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.4070\tF\tPrimPol-like protein 1, putative\tLmjF33.0030\tmRNA\ttaxon:347515\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0030\tppl1\t\tGO:0006979\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.4070\tP\tPrimPol-like protein 1, putative\tLmjF33.0030\tmRNA\ttaxon:347515\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0030\tppl1\t\tGO:0009411\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.4070\tP\tPrimPol-like protein 1, putative\tLmjF33.0030\tmRNA\ttaxon:347515\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0030\tppl1\t\tGO:0019985\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.4070\tP\tPrimPol-like protein 1, putative\tLmjF33.0030\tmRNA\ttaxon:347515\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0050\tLmjF.33.0050\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4090\tC\thypothetical protein, conserved\tLmjF33.0050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0060\tLmjF.33.0060\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4100\tP\tWD domain, G-beta repeat, putative\tLmjF33.0060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0070\tLmjF.33.0070\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4110\tC\thypothetical protein, conserved\tLmjF33.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0070\tLmjF.33.0070\t\tGO:0097542\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4110\tC\thypothetical protein, conserved\tLmjF33.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0080\tLmjF.33.0080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.4120\tC\thypothetical protein, conserved\tLmjF33.0080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0080\tLmjF.33.0080\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4120\tC\thypothetical protein, conserved\tLmjF33.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0120\tLmjF.33.0120\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10690\tC\tCEP19-like protein, putative\tLmjF33.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0130\tLmjF.33.0130\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10700\tC\ttrans-splicing factor, putative\tLmjF33.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0130\tLmjF.33.0130\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10700\tC\ttrans-splicing factor, putative\tLmjF33.0130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0150\tLmjF.33.0150\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10710\tC\thypothetical protein, conserved\tLmjF33.0150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0180\tLmjF.33.0180\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10730\tC\thypothetical protein, unknown function\tLmjF33.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0200\tLmjF.33.0200\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10750\tC\tmetallo-peptidase, Clan MC, Family M14, putative\tLmjF33.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0200\tLmjF.33.0200\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10750\tC\tmetallo-peptidase, Clan MC, Family M14, putative\tLmjF33.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0220\tLmjF.33.0220\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10780\tC\thypothetical protein, conserved\tLmjF33.0220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0220\tLmjF.33.0220\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10780\tC\thypothetical protein, conserved\tLmjF33.0220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0230\tLmjF.33.0230\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10800\tC\tpalmitoyl acyltransferase 2, putative\tLmjF33.0230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0230\tLmjF.33.0230\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb927.10.10800\tP\tpalmitoyl acyltransferase 2, putative\tLmjF33.0230\tmRNA\ttaxon:347515\t20110620\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0230\tLmjF.33.0230\t\tGO:0006897\tPMID:19240115\tISO\tGeneDB:Tb927.10.10800\tP\tpalmitoyl acyltransferase 2, putative\tLmjF33.0230\tmRNA\ttaxon:347515\t20110620\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0230\tLmjF.33.0230\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 2, putative\tLmjF33.0230\tmRNA\ttaxon:347515\t20110802\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0230\tLmjF.33.0230\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb927.10.10800\tP\tpalmitoyl acyltransferase 2, putative\tLmjF33.0230\tmRNA\ttaxon:347515\t20110620\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0235\tLmjF.33.0235\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10810\tC\tadenosine deaminase-like protein\tLmjF33.0235\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0240\tTDR1\t\tGO:0045174\tPMID:15056070|PMID:19497128\tIDA\t\tF\tthiol-dependent reductase 1\tLmjF33.0240\tmRNA\ttaxon:347515\t20090925\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0240\tTDR1\t\tGO:0070402\tPMID:15056070|PMID:19497128\tIDA\t\tF\tthiol-dependent reductase 1\tLmjF33.0240\tmRNA\ttaxon:347515\t20090925\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0250\tLmjF.33.0250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10820\tC\thypothetical protein, conserved\tLmjF33.0250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0260\tRGG2\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10830\tF\tRGG-containing protein 2, putative\tLmjF33.0260|RGGm\tmRNA\ttaxon:347515\t20120830\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0260\tRGG2\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10830\tC\tRGG-containing protein 2, putative\tLmjF33.0260|RGGm\tmRNA\ttaxon:347515\t20140522\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0260\tRGG2\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10830\tC\tRGG-containing protein 2, putative\tLmjF33.0260|RGGm\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0260\tRGG2\t\tGO:0032473\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10830\tC\tRGG-containing protein 2, putative\tLmjF33.0260|RGGm\tmRNA\ttaxon:347515\t20100922\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0310\tABCF1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10880\tC\tATP-binding cassette sub-family F member 1, putative\tLmjF33.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0310\tABCF1\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10880\tP\tATP-binding cassette sub-family F member 1, putative\tLmjF33.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0310\tABCF1\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tATP-binding cassette sub-family F member 1, putative\tLmjF33.0310\tmRNA\ttaxon:347515\t20090608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0312\tHSP83-1\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0312\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0312\tHSP83-1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0312\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0314\tHSP83-2\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0314\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0314\tHSP83-2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0314\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0316\tHSP83-3\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0316\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0316\tHSP83-3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0316\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0318\tHSP83-4\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0318\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0318\tHSP83-4\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0318\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0320\tHSP83-5\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0320\tHSP83-5\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0323\tHSP83-6\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0323\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0323\tHSP83-6\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0323\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0326\tHSP83-7\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0326\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0326\tHSP83-7\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0326\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0330\tHSP83-8\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0330\tHSP83-8\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0333\tHSP83-9\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0333\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0333\tHSP83-9\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0333\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0336\tHSP83-10\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0336\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0336\tHSP83-10\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0336\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0340\tHSP83-11\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0340\tHSP83-11\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0343\tHSP83-12\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0343\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0343\tHSP83-12\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0343\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0346\tHSP83-13\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0346\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0346\tHSP83-13\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0346\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0350\tHSP83-14\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0350\tHSP83-14\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0355\tHSP83-15\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0355\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0355\tHSP83-15\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0355\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0360\tHSP83-16\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83\tLmjF33.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0360\tHSP83-16\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83\tLmjF33.0360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0365\tHSP83-17\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10980\tC\theat shock protein 83-17\tLmjF33.0365\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0365\tHSP83-17\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10890\tC\theat shock protein 83-17\tLmjF33.0365\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0370\tLmjF.33.0370\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10990\tC\tWD domain, G-beta repeat, putative\tLmjF33.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0380\tLmjF.33.0380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11000\tC\thypothetical protein, conserved\tLmjF33.0380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0390\tLmjF.33.0390\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11010\tC\thypothetical protein, conserved\tLmjF33.0390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0390\tLmjF.33.0390\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11010\tC\thypothetical protein, conserved\tLmjF33.0390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0410\tMSH2\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11020\tC\tDNA mismatch repair protein MSH2, putative\tLmjF33.0410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0410\tMSH2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11020\tC\tDNA mismatch repair protein MSH2, putative\tLmjF33.0410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0420\tATOM11\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11030\tC\tArchaic translocase of outer membrane 11 kDa subunit, putative\tLmjF33.0420|POMP21\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0420\tATOM11\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11030\tC\tArchaic translocase of outer membrane 11 kDa subunit, putative\tLmjF33.0420|POMP21\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0420\tATOM11\t\tGO:0005742\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11030\tC\tArchaic translocase of outer membrane 11 kDa subunit, putative\tLmjF33.0420|POMP21\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0420\tATOM11\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11030\tP\tArchaic translocase of outer membrane 11 kDa subunit, putative\tLmjF33.0420|POMP21\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0420\tATOM11\t\tGO:0030150\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11030\tP\tArchaic translocase of outer membrane 11 kDa subunit, putative\tLmjF33.0420|POMP21\tmRNA\ttaxon:347515\t20150330\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0440\tLmjF.33.0440\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11050\tC\thypothetical protein, conserved\tLmjF33.0440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0440\tLmjF.33.0440\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11050\tC\thypothetical protein, conserved\tLmjF33.0440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0450\tLmjF.33.0450\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11060\tC\thypothetical protein, conserved\tLmjF33.0450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0450\tLmjF.33.0450\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11060\tC\thypothetical protein, conserved\tLmjF33.0450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0470\tLmjF.33.0470\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11100\tC\tdeoxyribodipyrimidine photo-lyase, putative\tLmjF33.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0490\tLmjF.33.0490\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11110\tC\thypothetical protein, conserved\tLmjF33.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0490\tLmjF.33.0490\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11110\tC\thypothetical protein, conserved\tLmjF33.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0540\tLmjF.33.0540\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11160\tC\tScaffold protein Nfu/NifU N terminal/NifU-like domain containing protein, putative\tLmjF33.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0550\tLmjF.33.0550\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11170\tC\thypothetical protein, conserved\tLmjF33.0550\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0550\tLmjF.33.0550\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11170\tC\thypothetical protein, conserved\tLmjF33.0550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0550\tLmjF.33.0550\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11170\tC\thypothetical protein, conserved\tLmjF33.0550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0560\tLmjF.33.0560\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11190\tC\ttRNA-splicing ligase RtcB, putative\tLmjF33.0560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0565\tLmjF.33.0565\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11200\tC\thypothetical protein, conserved\tLmjF33.0565\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0565\tLmjF.33.0565\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11200\tC\thypothetical protein, conserved\tLmjF33.0565\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0570\tLmjF.33.0570\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11210\tC\thypothetical protein, conserved\tLmjF33.0570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0580\tLmjF.33.0580\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11230\tC\tRas-induced vulval development antagonist, putative\tLmjF33.0580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0580\tLmjF.33.0580\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11230\tC\tRas-induced vulval development antagonist, putative\tLmjF33.0580\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0600\tLmjF.33.0600\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11260\tC\thypothetical protein, conserved\tLmjF33.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0610\tPFC16\t\tGO:0016281\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.11300\tC\tparaflagellar rod component, putative\tLmjF33.0610\tmRNA\ttaxon:347515\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0620\tIFT57/55\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11310\tC\tintraflagellar transport protein 57/55, putative\tLmjF33.0620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0620\tIFT57/55\t\tGO:0035735\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11310\tP\tintraflagellar transport protein 57/55, putative\tLmjF33.0620\tmRNA\ttaxon:347515\t20150309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0660\tLmjF.33.0660\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11350\tC\thypothetical protein, conserved\tLmjF33.0660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0720\tLmjF.33.0720\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11390\tC\t60S ribosomal protein L6, putative\tLmjF33.0720\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0730\tLmjF.33.0730\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11400\tC\tWD domain, G-beta repeat, putative\tLmjF33.0730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0730\tLmjF.33.0730\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11400\tC\tWD domain, G-beta repeat, putative\tLmjF33.0730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0750\tLmjF.33.0750\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11420\tC\thypothetical protein, conserved\tLmjF33.0750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0770\tCYC5\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11440\tC\tG1 cyclin CycE4, putative\tLmjF33.0770|CycE4\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0770\tCYC5\t\tGO:0051726\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11440\tP\tG1 cyclin CycE4, putative\tLmjF33.0770|CycE4\tmRNA\ttaxon:347515\t20140918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0780\tLmjF.33.0780\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11450\tC\tNLI interacting factor-like phosphatase, putative\tLmjF33.0780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0830\tDECR\t\tGO:0005739\tPMID:32487758\tIDA\t\tC\t2,4-dienoyl-CoA reductase\tLmjF33.0830\tmRNA\ttaxon:347515\t20210726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0830\tDECR\t\tGO:0006635\tPMID:32487758\tIMP\t\tP\t2,4-dienoyl-CoA reductase\tLmjF33.0830\tmRNA\ttaxon:347515\t20210726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0830\tDECR\t\tGO:0008670\tPMID:32487758\tIMP\t\tF\t2,4-dienoyl-CoA reductase\tLmjF33.0830\tmRNA\ttaxon:347515\t20210726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0840\tLmjF.33.0840\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11480\tC\thypothetical protein, conserved\tLmjF33.0840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0840\tLmjF.33.0840\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11480\tC\thypothetical protein, conserved\tLmjF33.0840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0840\tLmjF.33.0840\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11480\tC\thypothetical protein, conserved\tLmjF33.0840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0840\tLmjF.33.0840\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11480\tC\thypothetical protein, conserved\tLmjF33.0840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0840\tLmjF.33.0840\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11480\tC\thypothetical protein, conserved\tLmjF33.0840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0870\tLmjF.33.0870\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11510\tC\thypothetical protein, conserved\tLmjF33.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0890\tLmjF.33.0890\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11520\tC\thypothetical protein, conserved\tLmjF33.0890\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0910\tLmjF.33.0910\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11530\tC\thypothetical protein, conserved\tLmjF33.0910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0910\tLmjF.33.0910\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11530\tC\thypothetical protein, conserved\tLmjF33.0910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0910\tLmjF.33.0910\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11530\tC\thypothetical protein, conserved\tLmjF33.0910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0920\tLmjF.33.0920\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11540\tF\t40S ribosomal protein S3, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0960\tLmjF.33.0960\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11590\tC\tnicotinate phosphoribosyltransferase, putative\tLmjF33.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0960\tLmjF.33.0960\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11590\tC\tnicotinate phosphoribosyltransferase, putative\tLmjF33.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0960\tLmjF.33.0960\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11590\tC\tnicotinate phosphoribosyltransferase, putative\tLmjF33.0960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0980\tLmjF.33.0980\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11610\tC\tSKP1-like protein\tLmjF33.0980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1010\tLmjF.33.1010\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11620\tC\tcalcium-transporting ATPase, putative\tLmjF33.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1030\tLmjF.33.1030\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11640\tC\tProtein prenyltransferase alpha subunit repeat, putative\tLmjF33.1030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1035\tLmjF.33.1035\t\tGO:0030990\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11650\tC\thypothetical protein, conserved\tLmjF33.1035\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", 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conserved\tLmjF33.1140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1150\tPUF6\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11760\tF\tpumilio protein 6, putative\tLmjF33.1150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1150\tPUF6\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11760\tC\tpumilio protein 6, putative\tLmjF33.1150\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1150\tPUF6\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11760\tP\tpumilio protein 6, putative\tLmjF33.1150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1160\tLmjF.33.1160\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11770\tC\thypothetical protein, conserved\tLmjF33.1160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1170\tLmjF.33.1170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11780\tC\thypothetical protein, conserved\tLmjF33.1170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1170\tLmjF.33.1170\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11780\tC\thypothetical protein, conserved\tLmjF33.1170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1180\tLmjF.33.1180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11800\tC\tAxonemal inner arm dynein light chain, putative\tLmjF33.1180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1210\tLmjF.33.1210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11820\tC\thypothetical protein, conserved\tLmjF33.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1210\tLmjF.33.1210\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11820\tC\thypothetical protein, conserved\tLmjF33.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1230\tLmjF.33.1230\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11840\tC\tWD domain, G-beta repeat, putative\tLmjF33.1230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1240\tLmjF.33.1240\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11850\tC\thypothetical protein, conserved\tLmjF33.1240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1250\tLmjF.33.1250\t\tGO:0003723\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.11870\tF\tmitochondrial RNA binding protein, putative\tLmjF33.1250\tmRNA\ttaxon:347515\t20120906\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1250\tLmjF.33.1250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11870\tC\tmitochondrial RNA binding protein, putative\tLmjF33.1250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1250\tLmjF.33.1250\t\tGO:0009451\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11870\tP\tmitochondrial RNA binding protein, putative\tLmjF33.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1250\tLmjF.33.1250\t\tGO:0016070\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.11870\tP\tmitochondrial RNA binding protein, putative\tLmjF33.1250\tmRNA\ttaxon:347515\t20120906\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1270\tLmjF.33.1270\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11890\tC\thypothetical protein, conserved\tLmjF33.1270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1280\tMIC20\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11900\tC\tthioredoxin, putative\tLmjF33.1280\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1280\tMIC20\t\tGO:0061617\tPMID:30415698\tISO\tGeneDB:Tb927.10.11900\tC\tthioredoxin, putative\tLmjF33.1280\tmRNA\ttaxon:347515\t20181211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1300\tLmjF.33.1300\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11940\tC\tABC transporter, putative\tLmjF33.1300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1305\tLmjF.33.1305\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11950\tC\thypothetical protein, conserved\tLmjF33.1305\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1320\tLmjF.33.1320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11960\tC\thypothetical protein, conserved\tLmjF33.1320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1330\tGlnAT\t\tGO:0005829\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.11970\tC\tglutamine aminotransferase, putative\tLmjF33.1330\tmRNA\ttaxon:347515\t20130524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1330\tGlnAT\t\tGO:0047801\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.11970\tF\tglutamine aminotransferase, putative\tLmjF33.1330\tmRNA\ttaxon:347515\t20130524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1330\tGlnAT\t\tGO:0052654\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.11970\tF\tglutamine aminotransferase, putative\tLmjF33.1330\tmRNA\ttaxon:347515\t20130524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1330\tGlnAT\t\tGO:0070548\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.11970\tF\tglutamine aminotransferase, putative\tLmjF33.1330\tmRNA\ttaxon:347515\t20130524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1350\tLmjF.33.1350\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11990\tC\thypothetical protein, conserved\tLmjF33.1350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1350\tLmjF.33.1350\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.11990\tC\thypothetical protein, conserved\tLmjF33.1350\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1355\tLmjF.33.1355\t\tGO:0005737\tPMID:20442400\tISO\tGeneDB:Tb927.10.12000\tC\tiron-sulfur cluster assembly protein, putative\tLmjF33.1355\tmRNA\ttaxon:347515\t20110426\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1355\tLmjF.33.1355\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12000\tC\tiron-sulfur cluster assembly protein, putative\tLmjF33.1355\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1355\tLmjF.33.1355\t\tGO:0005739\tPMID:20442400|GO_REF:0000024\tISO\tGeneDB:Tb927.10.12000\tC\tiron-sulfur cluster assembly protein, putative\tLmjF33.1355\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1355\tLmjF.33.1355\t\tGO:0034227\tPMID:20442400|GO_REF:0000024\tISO\tGeneDB:Tb927.10.12000\tP\tiron-sulfur cluster assembly protein, putative\tLmjF33.1355\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1355\tLmjF.33.1355\t\tGO:0051536\tPMID:20442400|GO_REF:0000024\tISO\tGeneDB:Tb927.10.12000\tF\tiron-sulfur cluster assembly protein, putative\tLmjF33.1355\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1370\tLmjF.33.1370\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12030\tC\thypothetical protein, conserved\tLmjF33.1370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1380\tMPK11\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12040\tC\tmitogen activated protein kinase, putative\tLmjF33.1380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1380\tMPK11\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12040\tC\tmitogen activated protein kinase, putative\tLmjF33.1380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1380\tMPK11\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12040\tC\tmitogen activated protein kinase, putative\tLmjF33.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1380\tMPK11\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12040\tP\tmitogen activated protein kinase, putative\tLmjF33.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1380\tMPK11\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12040\tC\tmitogen activated protein kinase, putative\tLmjF33.1380\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1390\tLmjF.33.1390\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12050\tC\thypothetical protein, conserved\tLmjF33.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1390\tLmjF.33.1390\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12050\tC\thypothetical protein, conserved\tLmjF33.1390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1390\tLmjF.33.1390\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12050\tC\thypothetical protein, conserved\tLmjF33.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1430\tLmjF.33.1430\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12080\tC\thypothetical protein, conserved\tLmjF33.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1470\tLmjF.33.1470\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12090\tC\tRNA-binding protein, putative\tLmjF33.1470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1470\tLmjF.33.1470\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12090\tP\tRNA-binding protein, putative\tLmjF33.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1470\tLmjF.33.1470\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12090\tP\tRNA-binding protein, putative\tLmjF33.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1470\tLmjF.33.1470\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12090\tP\tRNA-binding protein, putative\tLmjF33.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1500\tLmjF.33.1500\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12130\tC\thypothetical protein, conserved\tLmjF33.1500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1520\tLmjF.33.1520\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12170\tC\tPRA1 family protein, putative\tLmjF33.1520\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1530\tLmjF.33.1530\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12190\tC\tPRA1 family protein, putative\tLmjF33.1530\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1570\tLmjF.33.1570\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12210\tC\tribulose-5-phosphate 3-epimerase, putative\tLmjF33.1570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1570\tLmjF.33.1570\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12210\tC\tribulose-5-phosphate 3-epimerase, putative\tLmjF33.1570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1570\tLmjF.33.1570\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12210\tP\tribulose-5-phosphate 3-epimerase, putative\tLmjF33.1570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1570\tLmjF.33.1570\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12210\tC\tribulose-5-phosphate 3-epimerase, putative\tLmjF33.1570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1575\tLmjF.33.1575\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12220\tC\thypothetical protein, conserved\tLmjF33.1575\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1575\tLmjF.33.1575\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12220\tC\thypothetical protein, conserved\tLmjF33.1575\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1575\tLmjF.33.1575\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12220\tC\thypothetical protein, conserved\tLmjF33.1575\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1590\tLmjF.33.1590\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12240\tC\t3-ketoacyl-CoA reductase, putative\tLmjF33.1590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1590\tLmjF.33.1590\t\tGO:0005783\tGO_REF:0000002\tISO\tGeneDB:TcCLB.509213.100\tC\t3-ketoacyl-CoA reductase, putative\tLmjF33.1590\tmRNA\ttaxon:347515\t20140123\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1600\tLmjF.33.1600\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12250\tC\thypothetical protein, conserved\tLmjF33.1600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1610\tLmjF.33.1610\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.12260\tC\tcytosolic nonspecific dipeptidase, 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1690\tLmjF.33.1690\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.1800\tC\tDNA polymerase delta catalytic subunit, putative\tLmjF33.1690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1700\tISWI\t\tGO:0004386\tGO_REF:0000024\tISM\tInterPro:IPR000330|Pfam:PF00271\tF\tISWI complex protein\tLmjF33.1700\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1700\tISWI\t\tGO:0005524\tGO_REF:0000024\tISS\tUniProtKB:Q9DF71_XENLA|InterPro:IPR001410\tF\tISWI complex protein\tLmjF33.1700\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1700\tISWI\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.1810\tC\tISWI complex protein\tLmjF33.1700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1700\tISWI\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.1810\tC\tISWI complex protein\tLmjF33.1700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1700\tISWI\t\tGO:0009372\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.1810\tP\tISWI complex protein\tLmjF33.1700\tmRNA\ttaxon:347515\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1700\tISWI\t\tGO:0031010\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.1810\tC\tISWI complex protein\tLmjF33.1700\tmRNA\ttaxon:347515\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1700\tISWI\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.1810\tP\tISWI complex protein\tLmjF33.1700\tmRNA\ttaxon:347515\t20140108\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1700\tISWI\t\tGO:0044212\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.1810\tF\tISWI complex protein\tLmjF33.1700\tmRNA\ttaxon:347515\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1730\tLmjF.33.1730\t\tGO:0003723\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.2.1860\tF\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF33.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1730\tLmjF.33.1730\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.1860\tC\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF33.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1730\tLmjF.33.1730\t\tGO:0016554\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.2.1860\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF33.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1730\tLmjF.33.1730\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.1860\tC\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF33.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1730\tLmjF.33.1730\t\tGO:0048255\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.2.1860\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF33.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1780\tLmjF.33.1780\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3190\tC\thypothetical protein, conserved\tLmjF33.1780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1800\tLmjF.33.1800\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3170\tC\tDer1-like family, putative\tLmjF33.1800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1860\tABCD3\t\tGO:0015908\tPMID:16754359|GO_REF:0000024\tISO\tGeneDB:Tb927.11.3130\tP\tglycosomal transporter (GAT2), putative\tLmjF33.1860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1860\tABCD3\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tglycosomal transporter (GAT2), putative\tLmjF33.1860\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1860\tABCD3\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3130\tC\tglycosomal transporter (GAT2), putative\tLmjF33.1860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1860\tABCD3\t\tGO:0046860\tPMID:16754359|GO_REF:0000024\tISO\tGeneDB:Tb927.11.3130\tC\tglycosomal transporter (GAT2), putative\tLmjF33.1860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1870\tLmjF.33.1870\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3120\tC\tnucleolar GTP-binding protein, putative\tLmjF33.1870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1870\tLmjF.33.1870\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3120\tC\tnucleolar GTP-binding protein, putative\tLmjF33.1870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1895\tfopnl\t\tGO:0031514\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_MOUSE\tC\tLisH domain-containing protein FOPNL, putative\tLmjF33.1895|for20\tmRNA\ttaxon:347515\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1895\tfopnl\t\tGO:0036064\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_MOUSE\tC\tLisH domain-containing protein FOPNL, putative\tLmjF33.1895|for20\tmRNA\ttaxon:347515\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1895\tfopnl\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.3090\tC\tLisH domain-containing protein FOPNL, putative\tLmjF33.1895|for20\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1895\tfopnl\t\tGO:0060271\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_HUMAN\tP\tLisH domain-containing protein FOPNL, putative\tLmjF33.1895|for20\tmRNA\ttaxon:347515\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1910\tLmjF.33.1910\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3070\tC\tribosome assembly protein RRB1, putative\tLmjF33.1910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1910\tLmjF.33.1910\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3070|UniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tC\tribosome assembly protein RRB1, putative\tLmjF33.1910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1910\tLmjF.33.1910\t\tGO:0042254\tGO_REF:0000002\tISA\tUniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tP\tribosome assembly protein RRB1, putative\tLmjF33.1910\tmRNA\ttaxon:347515\t20130909\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1920\tLmjF.33.1920\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3060\tC\tPhosphate transport (Pho88), putative\tLmjF33.1920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1920\tLmjF.33.1920\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3060\tC\tPhosphate transport (Pho88), putative\tLmjF33.1920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1930\tLmjF.33.1930\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3030\tC\tphosphoribosylpyrophosphate synthetase, putative\tLmjF33.1930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1950\tLmjF.33.1950\t\tGO:0004526\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3010\tF\thypothetical protein, conserved\tLmjF33.1950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1950\tLmjF.33.1950\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3010\tC\thypothetical protein, conserved\tLmjF33.1950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1970\tLmjF.33.1970\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2990\tC\tRNA editing complex protein MP46\tLmjF33.1970\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1970\tLmjF.33.1970\t\tGO:0045293\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2990\tC\tRNA editing complex protein MP46\tLmjF33.1970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2030\tLmjF.33.2030\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2970\tC\thypothetical protein, conserved\tLmjF33.2030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2030\tLmjF.33.2030\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2970\tC\thypothetical protein, conserved\tLmjF33.2030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2040\tNUP89\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2950\tC\tNucleoporin NUP89\tLmjF33.2040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2040\tNUP89\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2950\tC\tNucleoporin NUP89\tLmjF33.2040\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2040\tNUP89\t\tGO:0031080\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2950\tC\tNucleoporin NUP89\tLmjF33.2040\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2050\tLmjF.33.2050\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2940\tC\thypothetical protein, conserved\tLmjF33.2050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2050\tLmjF.33.2050\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2940\tC\thypothetical protein, conserved\tLmjF33.2050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2050\tLmjF.33.2050\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2940\tC\thypothetical protein, conserved\tLmjF33.2050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2100\tLmjF.33.2100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2920\tC\tglycerolphosphate mutase, putative\tLmjF33.2100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2110\tiPGAM\t\tGO:0004619\tPMID:19781556\tISO\tGeneDB:LmxM.32.2110\tF\tphosphoglycerate mutase, putative\tLmjF33.2110\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2110\tiPGAM\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2910\tC\tphosphoglycerate mutase, putative\tLmjF33.2110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2110\tiPGAM\t\tGO:0006096\tPMID:19781556\tISO\tGeneDB:LmxM.32.2110\tP\tphosphoglycerate mutase, putative\tLmjF33.2110\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2110\tiPGAM\t\tGO:0050897\tPMID:19781556\tISO\tGeneDB:LmxM.32.2110\tF\tphosphoglycerate mutase, putative\tLmjF33.2110\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2120\tLmjF.33.2120\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2900\tC\tHIT zinc finger, putative\tLmjF33.2120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2120\tLmjF.33.2120\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2900\tC\tHIT zinc finger, putative\tLmjF33.2120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2120\tLmjF.33.2120\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2900\tP\tHIT zinc finger, putative\tLmjF33.2120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2140\tLmjF.33.2140\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2880\tP\tkinesin, putative\tLmjF33.2140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2140\tLmjF.33.2140\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2880\tC\tkinesin, putative\tLmjF33.2140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2140\tLmjF.33.2140\t\tGO:0005819\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2880\tC\tkinesin, putative\tLmjF33.2140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2140\tLmjF.33.2140\t\tGO:0005871\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2880\tC\tkinesin, putative\tLmjF33.2140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2140\tLmjF.33.2140\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2880\tP\tkinesin, putative\tLmjF33.2140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2140\tLmjF.33.2140\t\tGO:0032133\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2880\tC\tkinesin, putative\tLmjF33.2140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2140\tLmjF.33.2140\t\tGO:0051225\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2880\tP\tkinesin, putative\tLmjF33.2140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2140\tLmjF.33.2140\t\tGO:0051233\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2880\tC\tkinesin, putative\tLmjF33.2140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2220\tLmjF.33.2220\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2790\tC\tSolute carrier (proton/amino acid symporter), TRAMD3 or PAT1, putative\tLmjF33.2220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2220\tLmjF.33.2220\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2790\tC\tSolute carrier (proton/amino acid symporter), TRAMD3 or PAT1, putative\tLmjF33.2220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2250\tLmjF.33.2250\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2760\tC\thypothetical protein, conserved\tLmjF33.2250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2300\tLmjF.33.2300\t\tGO:0003978\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2730\tF\tudp-glc 4'-epimerase, putative\tLmjF33.2300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2300\tLmjF.33.2300\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2730\tC\tudp-glc 4'-epimerase, putative\tLmjF33.2300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2320\tLmjF.33.2320\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2710\tC\tcell division cycle 45 (CDC45), putative\tLmjF33.2320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2320\tLmjF.33.2320\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2710\tC\tcell division cycle 45 (CDC45), putative\tLmjF33.2320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2320\tLmjF.33.2320\t\tGO:0006270\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2710\tP\tcell division cycle 45 (CDC45), putative\tLmjF33.2320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2320\tLmjF.33.2320\t\tGO:0044786\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2710\tP\tcell division cycle 45 (CDC45), putative\tLmjF33.2320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2320\tLmjF.33.2320\t\tGO:0071162\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2710\tC\tcell division cycle 45 (CDC45), putative\tLmjF33.2320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2340\tLmjF.33.2340\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2690\tC\tsuccinyl-coA:3-ketoacid-coenzyme A transferase, mitochondrial precursor, putative\tLmjF33.2340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2340\tLmjF.33.2340\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2690\tC\tsuccinyl-coA:3-ketoacid-coenzyme A transferase, mitochondrial precursor, putative\tLmjF33.2340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2360\tLmjF.33.2360\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2680\tC\tATP synthase regulation protein NCA2, putative\tLmjF33.2360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2370\tNUP59\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2670\tC\tNucleoporin NUP59\tLmjF33.2370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2370\tNUP59\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2670\tC\tNucleoporin NUP59\tLmjF33.2370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2380\tLmjF.33.2380\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2660\tC\tGolgi reassembly stacking protein (GRASP homologue), putative\tLmjF33.2380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2390\tLmjF.33.2390\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2650\tC\theat shock protein, putative\tLmjF33.2390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2390\tLmjF.33.2390\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2650\tC\theat shock protein, putative\tLmjF33.2390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2400\tNOP53\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2640\tC\tras-like small GTPases, putative\tLmjF33.2400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2400\tNOP53\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2640\tC\tras-like small GTPases, putative\tLmjF33.2400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2400\tNOP53\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2640\tC\tras-like small GTPases, putative\tLmjF33.2400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2410\tLmjF.33.2410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2630\tC\tdiphthamide biosynthesis enzyme Dph1/Dph2 domain containing protein, putative\tLmjF33.2410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2430\tLmjF.33.2430\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2620\tC\thypothetical protein, conserved\tLmjF33.2430\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2440\tLmjF.33.2440\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2610\tC\thypothetical protein, conserved\tLmjF33.2440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2440\tLmjF.33.2440\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2610\tP\thypothetical protein, 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RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2470\tPOMP11\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2580\tC\tPresent in the outer mitochondrial membrane proteome 11\tLmjF33.2470\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2490\tRAD51-3\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2550\tC\trecombinase rad51, putative\tLmjF33.2490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2490\tRAD51-3\t\tGO:0090592\tPMID:32609721\tIMP\t\tP\trecombinase rad51, putative\tLmjF33.2490\tmRNA\ttaxon:347515\t20210215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2500\tLmjF.33.2500\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2540\tC\tRadial spokehead-like protein, putative\tLmjF33.2500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2510\tLmjF.33.2510\t\tGO:0003723\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2530\tF\tmitochondrial RNA binding complex 1 subunit\tLmjF33.2510\tmRNA\ttaxon:347515\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2510\tLmjF.33.2510\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2530\tC\tmitochondrial RNA binding complex 1 subunit\tLmjF33.2510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2510\tLmjF.33.2510\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2530\tC\tmitochondrial RNA binding complex 1 subunit\tLmjF33.2510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2510\tLmjF.33.2510\t\tGO:0043631\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2530\tP\tmitochondrial RNA binding complex 1 subunit\tLmjF33.2510\tmRNA\ttaxon:347515\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2510\tLmjF.33.2510\t\tGO:0048255\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2530\tP\tmitochondrial RNA binding complex 1 subunit\tLmjF33.2510\tmRNA\ttaxon:347515\t20120917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2520\tLmjF.33.2520\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2520\tC\tUDP-N-acetylglucosamine pyrophosphorylase, putative\tLmjF33.2520\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2520\tLmjF.33.2520\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2520\tC\tUDP-N-acetylglucosamine pyrophosphorylase, putative\tLmjF33.2520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2530\tLmjF.33.2530\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2510\tC\tNUC173 domain containing protein, putative\tLmjF33.2530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2540\tLmjF.33.2540\t\tGO:0004181\tGO_REF:0000024\tISO\tGeneDB:TcCLB.504153.160\tF\tcarboxypeptidase, putative\tLmjF33.2540\tmRNA\ttaxon:347515\t20120618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2540\tLmjF.33.2540\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2500\tC\tcarboxypeptidase, putative\tLmjF33.2540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2540\tLmjF.33.2540\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:TcCLB.504153.160\tC\tcarboxypeptidase, putative\tLmjF33.2540\tmRNA\ttaxon:347515\t20120618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2540\tLmjF.33.2540\t\tGO:0006508\tGO_REF:0000024\tISO\tGeneDB:TcCLB.504153.160\tP\tcarboxypeptidase, putative\tLmjF33.2540\tmRNA\ttaxon:347515\t20120618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2540\tLmjF.33.2540\t\tGO:0006518\tGO_REF:0000024\tISO\tGeneDB:TcCLB.504153.160\tP\tcarboxypeptidase, putative\tLmjF33.2540\tmRNA\ttaxon:347515\t20120618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2560\tLmjF.33.2560\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2490\tC\tUnc104-like kinesin, putative\tLmjF33.2560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2560\tLmjF.33.2560\t\tGO:0005871\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2490\tC\tUnc104-like kinesin, putative\tLmjF33.2560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2570\tLmjF.33.2570\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2470\tC\taminopeptidase, putative\tLmjF33.2570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2570\tLmjF.33.2570\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.2470\tC\taminopeptidase, putative\tLmjF33.2570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2590\tLmjF.33.2590\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4140\tC\thypothetical protein, conserved\tLmjF33.2590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2590\tLmjF.33.2590\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4140\tC\thypothetical protein, conserved\tLmjF33.2590\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2600\tLmjF.33.2600\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4130\tC\tenoyl-CoA hydratase/Enoyl-CoA isomerase/3- hydroxyacyl-CoA dehydrogenase, putative\tLmjF33.2600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2610\tMPPA\t\tGO:0004222\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4110\tF\tMitochondrial-processing peptidase subunit alpha\tLmjF33.2610\tmRNA\ttaxon:347515\t20141205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2610\tMPPA\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4110\tC\tMitochondrial-processing peptidase subunit alpha\tLmjF33.2610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2610\tMPPA\t\tGO:0017087\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4110\tC\tMitochondrial-processing peptidase subunit alpha\tLmjF33.2610\tmRNA\ttaxon:347515\t20141205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2610\tMPPA\t\tGO:0030150\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4110\tP\tMitochondrial-processing peptidase subunit alpha\tLmjF33.2610\tmRNA\ttaxon:347515\t20141205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2620\tLmjF.33.2620\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4090\tC\tsignal recognition particle receptor beta subunit, putative\tLmjF33.2620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2620\tLmjF.33.2620\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4090\tC\tsignal recognition particle receptor beta subunit, putative\tLmjF33.2620\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2630\tLmjF.33.2630\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4060\tC\tdynein intermediate chain, putative\tLmjF33.2630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2630\tLmjF.33.2630\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4060\tC\tdynein intermediate chain, putative\tLmjF33.2630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2650\tLmjF.33.2650\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4020\tC\thypothetical protein, conserved\tLmjF33.2650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2650\tLmjF.33.2650\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4020\tC\thypothetical protein, conserved\tLmjF33.2650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2650\tLmjF.33.2650\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4020\tC\thypothetical protein, conserved\tLmjF33.2650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2650\tLmjF.33.2650\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4020\tP\thypothetical protein, conserved\tLmjF33.2650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2650\tLmjF.33.2650\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4020\tP\thypothetical protein, conserved\tLmjF33.2650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2650\tLmjF.33.2650\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.4020\tC\thypothetical protein, conserved\tLmjF33.2650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2690\tJ56\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.3960\tC\tDNAJ family-like protein\tLmjF33.2690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2690\tJ56\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.3960\tC\tDNAJ family-like protein\tLmjF33.2690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2690\tJ56\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.3960\tC\tDNAJ family-like protein\tLmjF33.2690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2700\tLmjF.33.2700\t\tGO:0003677\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3930\tF\tDNA replication licensing factor MCM3, putative\tLmjF33.2700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2700\tLmjF.33.2700\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3930\tC\tDNA replication licensing factor MCM3, putative\tLmjF33.2700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2700\tLmjF.33.2700\t\tGO:0006270\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3930\tP\tDNA replication licensing factor MCM3, putative\tLmjF33.2700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2700\tLmjF.33.2700\t\tGO:0044786\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3930\tP\tDNA replication licensing factor MCM3, putative\tLmjF33.2700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2700\tLmjF.33.2700\t\tGO:0071162\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3930\tC\tDNA replication licensing factor MCM3, putative\tLmjF33.2700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2710\tLmjF.33.2710\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3920\tP\tComplex 1 protein (LYR family), putative\tLmjF33.2710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2720\tLmjF.33.2720\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3910\tC\t3-oxoacyl-acyl carrier protein synthase ii, putative\tLmjF33.2720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2720\tLmjF.33.2720\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3910\tC\t3-oxoacyl-acyl carrier protein synthase ii, putative\tLmjF33.2720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2730\tGAP1\t\tGO:0000963\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3800\tP\tMRB1-associated protein\tLmjF33.2730\tmRNA\ttaxon:347515\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2730\tGAP1\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3800\tF\tMRB1-associated protein\tLmjF33.2730\tmRNA\ttaxon:347515\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2730\tGAP1\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3800\tC\tMRB1-associated protein\tLmjF33.2730\tmRNA\ttaxon:347515\t20100706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2730\tGAP1\t\tGO:0016556\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3800\tP\tMRB1-associated protein\tLmjF33.2730\tmRNA\ttaxon:347515\t20141205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2730\tGAP1\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3800\tC\tMRB1-associated protein\tLmjF33.2730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2740\tLmjF.33.2740\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3780\tC\ttranslation initiation factor IF-2, putative\tLmjF33.2740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2750\tLmjF.33.2750\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.3750\tC\tDomain of unknown function (DUF4520), putative\tLmjF33.2750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2790\tLmjF.33.2790\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3620\tC\tGTP-binding elongation factor tu family protein, putative\tLmjF33.2790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2800\tLmjF.33.2800\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.3610\tC\thypothetical protein, conserved\tLmjF33.2800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2800\tLmjF.33.2800\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3610\tC\thypothetical protein, conserved\tLmjF33.2800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2810\tLmjF.33.2810\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3580\tC\ttranscription elongation factor-like protein\tLmjF33.2810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2810\tLmjF.33.2810\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.3580\tC\ttranscription elongation factor-like protein\tLmjF33.2810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2820\tLmjF.33.2820\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3480\tC\tPWWP domain/TFIIS helical bundle-like domain containing protein, putative\tLmjF33.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2820\tLmjF.33.2820\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3480\tC\tPWWP domain/TFIIS helical bundle-like domain containing protein, putative\tLmjF33.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2880\tLmjF.33.2880\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3400\tC\thypothetical protein, conserved\tLmjF33.2880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2905\tLmjF.33.2905\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.503413.4\tC\tPresent in the outer mitochondrial membrane proteome 22 (pseudogene)\tLmjF33.2905\tpseudogenic_transcript\ttaxon:347515\t20150903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2905\tLmjF.33.2905\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5530\tC\tPresent in the outer mitochondrial membrane proteome 22 (pseudogene)\tLmjF33.2905\tpseudogenic_transcript\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2930\tPOMP22\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.503413.4\tC\tPresent in the outer mitochondrial membrane proteome 22\tLmjF33.2930\tmRNA\ttaxon:347515\t20150903\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2930\tPOMP22\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5530\tC\tPresent in the outer mitochondrial membrane proteome 22\tLmjF33.2930\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2940\tLmjF.33.2940\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5480\tC\thypothetical protein, conserved\tLmjF33.2940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3040\tABCI3\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5410\tC\tABC transporter family-like protein\tLmjF33.3040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3040\tABCI3\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5410\tC\tABC transporter family-like protein\tLmjF33.3040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3050\tTDBP1\t\tGO:0005634\tPMID:20659295\tIDA\t\tC\ttyrosyl-DNA phosphodiesterase 1\tLmjF33.3050\tmRNA\ttaxon:347515\t20100902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3050\tTDBP1\t\tGO:0017005\tPMID:20659295\tIMP\t\tF\ttyrosyl-DNA phosphodiesterase 1\tLmjF33.3050\tmRNA\ttaxon:347515\t20100902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3050\tTDBP1\t\tGO:0020023\tPMID:20659295\tIDA\t\tC\ttyrosyl-DNA phosphodiesterase 1\tLmjF33.3050\tmRNA\ttaxon:347515\t20100902\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3060\tLmjF.33.3060\t\tGO:0005737\tPMID:20345655\tIDA\t\tC\t46 kD virulence factor\tLmjF33.3060\tmRNA\ttaxon:347515\t20100504\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3060\tLmjF.33.3060\t\tGO:0030430\tPMID:20345655\tIDA\t\tC\t46 kD virulence factor\tLmjF33.3060\tmRNA\ttaxon:347515\t20131104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3070\tFLAM8\t\tGO:0031514\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5760\tC\tFlagellar Member 8\tLmjF33.3070\tmRNA\ttaxon:347515\t20150813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3090\tLmjF.33.3090\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5810\tC\tHolliday-junction resolvase-like of SPT6/SH2 domain containing protein, putative\tLmjF33.3090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3090\tLmjF.33.3090\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5810\tC\tHolliday-junction resolvase-like of SPT6/SH2 domain containing protein, putative\tLmjF33.3090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3130\tLmjF.33.3130\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5830\tC\tTrypsin-like peptidase domain containing protein, putative\tLmjF33.3130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3150\tLmjF.33.3150\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5910\tC\t40S ribosomal protein S13, putative\tLmjF33.3150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3170\tLmjF.33.3170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5950\tC\thypothetical protein, conserved\tLmjF33.3170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3170\tLmjF.33.3170\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.5950\tC\thypothetical protein, conserved\tLmjF33.3170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3180\tLmjF.33.3180\t\tGO:1990900\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5970\tC\thypothetical protein, conserved\tLmjF33.3180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3190\tLmjF.33.3190\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5850\tC\tsmall nuclear ribonucleoprotein SmD2\tLmjF33.3190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3190\tLmjF.33.3190\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.5850\tC\tsmall nuclear ribonucleoprotein SmD2\tLmjF33.3190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3210\tLmjF.33.3210\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.6050\tC\tbeta prime cop protein, putative\tLmjF33.3210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3260\tABCI4\t\tGO:0005739\tPMID:23716044\tIDA\t\tC\tATP-binding cassette half-transporter I4\tLmjF33.3260\tmRNA\ttaxon:347515\t20180205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3260\tABCI4\t\tGO:0005886\tPMID:23716044\tIDA\t\tC\tATP-binding cassette half-transporter I4\tLmjF33.3260\tmRNA\ttaxon:347515\t20180205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3260\tABCI4\t\tGO:0030001\tPMID:23716044\tIMP\t\tP\tATP-binding cassette half-transporter I4\tLmjF33.3260\tmRNA\ttaxon:347515\t20180205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3260\tABCI4\t\tGO:0046873\tPMID:23716044\tIMP\t\tF\tATP-binding cassette half-transporter I4\tLmjF33.3260\tmRNA\ttaxon:347515\t20180205\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.3270\tLmjF.33.3270\t\tGO:0005829\tPMID:18364711\tRCA\t\tC\tdelta-12 fatty acid desaturase\tLmjF33.3270\tmRNA\ttaxon:347515\t20100826\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0000302\tPMID:23421749\tIMP\t\tP\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0004129\tPMID:21893024\tIMP\t\tF\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20110916\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0004447\tPMID:15850459\tIMP\t\tF\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20140403\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0004447\tPMID:20060805\tIDA\t\tF\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20100215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0004601\tPMID:15850459\tIMP\t\tF\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20140403\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0005783\tGO_REF:0000002\tISO\tGeneDB:TcCLB.503745.30\tC\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20120425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0008447\tPMID:20060805\tIDA\t\tF\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20100215\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0016688\tPMID:15850459\tIMP\t\tF\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20140403\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0042744\tPMID:15850459\tIMP\t\tP\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20140403\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0043066\tPMID:19749178\tIMP\t\tP\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0055074\tPMID:19749178\tIMP\t\tP\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20100222\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0072593\tPMID:19749178\tIMP\t\tP\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0080\tG6PDH\t\tGO:0000302\tPMID:23421749\tIMP\t\tP\tglucose-6-phosphate 1-dehydrogenase, putative\tLmjF34.0080\tmRNA\ttaxon:347515\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0080\tG6PDH\t\tGO:0042493\tPMID:23421749\tIMP\t\tP\tglucose-6-phosphate 1-dehydrogenase, putative\tLmjF34.0080\tmRNA\ttaxon:347515\t20131121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0100\tppl2\t\tGO:0003887\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.2520\tF\tPrimPol-like protein 2, putative\tLmjF34.0100\tmRNA\ttaxon:347515\t20140303\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0100\tppl2\tNOT\tGO:0003896\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.2520\tF\tPrimPol-like protein 2, 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putative\tLmjF34.0110\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0120\tADKC\t\tGO:0005524\tPMID:16567051\tISO\tGeneDB:TcCLB.506195.90\tF\tadenylate kinase 2\tLmjF34.0120\tmRNA\ttaxon:347515\t20110408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0120\tADKC\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2540\tC\tadenylate kinase 2\tLmjF34.0120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0120\tADKC\t\tGO:0005829\tPMID:16567051\tISO\tGeneDB:TcCLB.506195.90\tC\tadenylate kinase 2\tLmjF34.0120\tmRNA\ttaxon:347515\t20110408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0120\tADKC\t\tGO:0020015\tPMID:16567051\tISO\tGeneDB:TcCLB.506195.90\tC\tadenylate kinase 2\tLmjF34.0120\tmRNA\ttaxon:347515\t20110408\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0130\tLmjF.34.0130\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2550\tC\tmalate dehydrogenase, putative\tLmjF34.0130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0140\tLmjF.34.0140\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2560\tC\tmalate dehydrogenase\tLmjF34.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0140\tLmjF.34.0140\t\tGO:0016491\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2560\tF\tmalate dehydrogenase\tLmjF34.0140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0160\tmMDH\t\tGO:0006099\tPMID:16750864\tEXP\t\tP\tmitochondrial malate dehydrogenase\tLmjF34.0160\tmRNA\ttaxon:347515\t20090409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0160\tmMDH\t\tGO:0016491\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2560\tF\tmitochondrial malate dehydrogenase\tLmjF34.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0160\tmMDH\t\tGO:0016615\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2560\tF\tmitochondrial malate dehydrogenase\tLmjF34.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0160\tmMDH\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2560\tC\tmitochondrial malate dehydrogenase\tLmjF34.0160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0170\tLmjF.34.0170\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2580\tC\tNucleolar protein 12 (25kDa), putative\tLmjF34.0170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0170\tLmjF.34.0170\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2580\tC\tNucleolar protein 12 (25kDa), putative\tLmjF34.0170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0180\tLmjF.34.0180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2590\tC\thypothetical protein, conserved\tLmjF34.0180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0190\tLmjF.34.0190\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2610\tC\tDomain of unknown function (DUF1935), putative\tLmjF34.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0200\tARM58\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:LinJ.34.0220\tP\tAntimony resistance marker of 58 kDa\tLmjF34.0200\tmRNA\ttaxon:347515\t20150220\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0210\tACDP23B\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2620\tC\tCS domain containing protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0230\tIFT81\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2640\tC\tintraflagellar transport protein 81, putative\tLmjF34.0230\tmRNA\ttaxon:347515\t20150302\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0230\tIFT81\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2640\tC\tintraflagellar transport protein 81, putative\tLmjF34.0230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0230\tIFT81\t\tGO:0035721\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2640\tP\tintraflagellar transport protein 81, putative\tLmjF34.0230\tmRNA\ttaxon:347515\t20150302\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0270\tLmjF.34.0270\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2680\tC\tpyridine nucleotide-disulphide oxidoreductase, putative\tLmjF34.0270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0290\tLmjF.34.0290\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2690\tC\tTrafficking protein Mon1, putative\tLmjF34.0290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0300\tLmjF.34.0300\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2700\tC\thypothetical protein, conserved\tLmjF34.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0310\tLmjF.34.0310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2720\tC\ttRNA pseudouridine synthase, putative\tLmjF34.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0320\tLmjF.34.0320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2730\tC\thypothetical protein, conserved\tLmjF34.0320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0320\tLmjF.34.0320\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2730\tC\thypothetical protein, conserved\tLmjF34.0320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0320\tLmjF.34.0320\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2730\tC\thypothetical 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59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0330\tDHS34\t\tGO:0034038\tPMID:19880510\tISO\tGeneDB:Linj34_V3.0350\tF\tdeoxyhypusine synthase\tLmjF34.0330\tmRNA\ttaxon:347515\t20091109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0330\tDHS34\t\tGO:0043687\tPMID:19880510\tISO\tGeneDB:Linj34_V3.0350\tP\tdeoxyhypusine synthase\tLmjF34.0330\tmRNA\ttaxon:347515\t20091109\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0330\tDHS34\t\tGO:0050983\tPMID:19880510\tIDA\t\tP\tdeoxyhypusine synthase\tLmjF34.0330\tmRNA\ttaxon:347515\t20101116\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0350\tLmjF.34.0350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2770\tC\teukaryotic translation initiation factor 5, putative\tLmjF34.0350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0360\tRPC1\t\tGO:0003899\tGO_REF:0000012\tISA\tUniProtKB:P08968\tF\tDNA-directed RNA polymerase III subunit C1, putative\tLmjF34.0360\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0360\tRPC1\t\tGO:0005634\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.10.2780|UniProtKB:P08968\tC\tDNA-directed RNA polymerase III subunit C1, putative\tLmjF34.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0360\tRPC1\t\tGO:0006351\tGO_REF:0000012\tISA\tUniProtKB:P08968\tP\tDNA-directed RNA polymerase III subunit C1, putative\tLmjF34.0360\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0370\tLmjF.34.0370\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2790\tC\tConserved oligomeric complex COG6, putative\tLmjF34.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0370\tLmjF.34.0370\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2790\tC\tConserved oligomeric complex COG6, putative\tLmjF34.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0370\tLmjF.34.0370\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2790\tC\tConserved oligomeric complex COG6, putative\tLmjF34.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0400\tLmjF.34.0400\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2800\tC\thypothetical protein, conserved\tLmjF34.0400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0430\tLmjF.34.0430\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2830\tC\thypothetical protein, conserved\tLmjF34.0430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0470\tLmjF.34.0470\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2860\tC\tWD domain, G-beta repeat, putative\tLmjF34.0470\tmRNA\ttaxon:347515\t20110317\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0490\tLmjF.34.0490\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2900\tC\timportin beta-1 subunit, putative\tLmjF34.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0495\tLmjF.34.0495\t\tGO:0003723\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2910\tF\tsplicing factor ptsr1 interacting protein, putative\tLmjF34.0495\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0495\tLmjF.34.0495\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2910\tC\tsplicing factor ptsr1 interacting protein, putative\tLmjF34.0495\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0495\tLmjF.34.0495\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.2910\tC\tsplicing factor ptsr1 interacting protein, putative\tLmjF34.0495\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0540\tLmjF.34.0540\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2940\tC\tGamma-soluble NSF attachment protein (SNAP-gamma) (N-ethylmaleimide-sensitive factor attachment protein, gamma), putative\tLmjF34.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0550\tCLRP\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:LinJ.34.0570\tC\tCysteine leucine rich protein\tLmjF34.0550\tmRNA\ttaxon:347515\t20160801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0550\tCLRP\t\tGO:0005886\tGO_REF:0000024\tISO\tGeneDB:LinJ.34.0570\tC\tCysteine leucine rich protein\tLmjF34.0550\tmRNA\ttaxon:347515\t20160801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0550\tCLRP\t\tGO:0035690\tGO_REF:0000024\tISO\tGeneDB:LinJ.34.0570\tP\tCysteine leucine rich protein\tLmjF34.0550\tmRNA\ttaxon:347515\t20160801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0570\tGUF1\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2960\tC\tTranslation factor GUF1, mitochondrial, putative\tLmjF34.0570|LepA\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0570\tGUF1\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2960\tC\tTranslation factor GUF1, mitochondrial, putative\tLmjF34.0570|LepA\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0580\tLmjF.34.0580\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2970\tC\thypothetical protein, conserved\tLmjF34.0580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0650\tRPN11\t\tGO:0005838\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2980\tC\tproteasome regulatory non-ATPase subunit 11, putative\tLmjF34.0650\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0650\tRPN11\t\tGO:0006511\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2980\tP\tproteasome regulatory non-ATPase subunit 11, putative\tLmjF34.0650\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0710\tLmjF.34.0710\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3700\tC\thypothetical protein, conserved\tLmjF34.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0710\tLmjF.34.0710\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3700\tC\thypothetical protein, conserved\tLmjF34.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0740\tLmjF.34.0740\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3670\tC\tCBF/Mak21 family, putative\tLmjF34.0740\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0810\tLmjF.34.0810\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3620\tC\tserine/threonine-protein phosphatase PP1, putative\tLmjF34.0810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0810\tLmjF.34.0810\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3620\tP\tserine/threonine-protein phosphatase PP1, putative\tLmjF34.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0810\tLmjF.34.0810\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3620\tP\tserine/threonine-protein phosphatase PP1, putative\tLmjF34.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0850\tLmjF.34.0850\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3560\tC\tserine/threonine-protein phosphatase PP1, putative\tLmjF34.0850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0860\tLmjF.34.0860\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3550\tC\t60S ribosomal protein L13a, putative\tLmjF34.0860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0860\tLmjF.34.0860\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3550\tC\t60S ribosomal protein L13a, putative\tLmjF34.0860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0870\tLmjF.34.0870\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3540\tC\thypothetical protein, conserved\tLmjF34.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0890\tLmjF.34.0890\t\tGO:0003677\tGO_REF:0000002\tISO\tGeneDB:927.4.3490\tF\tDNA-directed RNA polymerase III subunit, putative\tLmjF34.0890\tmRNA\ttaxon:347515\t20110425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0890\tLmjF.34.0890\t\tGO:0003899\tPMID:16246139\tISO\tGeneDB:927.4.3490\tF\tDNA-directed RNA polymerase III subunit, putative\tLmjF34.0890\tmRNA\ttaxon:347515\t20110425\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0890\tLmjF.34.0890\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3510\tC\tDNA-directed RNA polymerase III subunit, putative\tLmjF34.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0890\tLmjF.34.0890\t\tGO:0006351\tPMID:16246139\tISO\tGeneDB:927.4.3490\tP\tDNA-directed RNA polymerase III subunit, putative\tLmjF34.0890\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0910\tLmjF.34.0910\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3450\tC\thypothetical protein, conserved\tLmjF34.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0910\tLmjF.34.0910\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3450\tC\thypothetical protein, conserved\tLmjF34.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0910\tLmjF.34.0910\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3450\tC\thypothetical protein, conserved\tLmjF34.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0940\tWEE1\t\tGO:0001558\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.3420\tP\tWee1-like protein kinase, putative\tLmjF34.0940\tmRNA\ttaxon:347515\t20131122\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0940\tWEE1\t\tGO:0038083\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3420\tP\tWee1-like protein kinase, putative\tLmjF34.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0940\tWEE1\t\tGO:0045736\tGO_REF:0000002\tISS\tUniProtKB:WEE2_MOUSE\tP\tWee1-like protein kinase, putative\tLmjF34.0940\tmRNA\ttaxon:347515\t20131122\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0940\tWEE1\t\tGO:0046777\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.3420\tP\tWee1-like protein kinase, putative\tLmjF34.0940\tmRNA\ttaxon:347515\t20131122\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0950\tLmjF.34.0950\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3410\tC\tselenoprotein, putative\tLmjF34.0950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1020\tCARNMT1\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3350\tC\tN2227-like protein, putative\tLmjF34.1020\tmRNA\ttaxon:347515\t20160607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1070\tLmjF.34.1070\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3170\tC\tLipase (class 3), putative\tLmjF34.1070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1090\tDAT\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3160\tC\tdihydroxyacetonephosphate acyltransferase\tLmjF34.1090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1090\tDAT\t\tGO:0008611\tPMID:16423830|PMID:19497128\tIDA\t\tP\tdihydroxyacetonephosphate acyltransferase\tLmjF34.1090\tmRNA\ttaxon:347515\t20090930\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1090\tDAT\t\tGO:0020015\tPMID:16423830|GO_REF:0000024\tISO\tGeneDB:Tb927.4.3160\tC\tdihydroxyacetonephosphate acyltransferase\tLmjF34.1090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1090\tDAT\t\tGO:0020022\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3160\tC\tdihydroxyacetonephosphate acyltransferase\tLmjF34.1090\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1110\tLmjF.34.1110\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3140\tC\tShwachman-Bodian-Diamond syndrome (SBDS) protein/SBDS protein C-terminal domain containing protein, putative\tLmjF34.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1110\tLmjF.34.1110\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3140\tC\tShwachman-Bodian-Diamond syndrome (SBDS) protein/SBDS protein C-terminal domain containing protein, putative\tLmjF34.1110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1120\tLmjF.34.1120\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3130\tP\tDomain of Unknown Function (DUF1042), putative\tLmjF34.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1120\tLmjF.34.1120\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3130\tC\tDomain of Unknown Function (DUF1042), putative\tLmjF34.1120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1120\tLmjF.34.1120\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.3130\tC\tDomain of Unknown Function (DUF1042), 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1140\tLmjF.34.1140\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3110\tC\tdihydrouridine synthase (Dus), putative\tLmjF34.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1140\tLmjF.34.1140\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3110\tC\tdihydrouridine synthase (Dus), putative\tLmjF34.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1190\tLmjF.34.1190\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tATP-dependent RNA helicase-like protein\tLmjF34.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1190\tLmjF.34.1190\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tATP-dependent RNA helicase-like protein\tLmjF34.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1190\tLmjF.34.1190\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tATP-dependent RNA helicase-like protein\tLmjF34.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1190\tLmjF.34.1190\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tATP-dependent RNA helicase-like protein\tLmjF34.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1210\tLmjF.34.1210\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3000\tC\thypothetical protein, conserved\tLmjF34.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1210\tLmjF.34.1210\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3000\tC\thypothetical protein, conserved\tLmjF34.1210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1240\tLmjF.34.1240\t\tGO:0003723\tPMID:20444260\tISM\t\tF\t3'-5' exonuclease, putative\tLmjF34.1240\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1250\tLmjF.34.1250\t\tGO:0004724\tPMID:20551176\tISO\tGeneDB:Tb09.160.4460\tF\tPTP1-interacting protein, 39 kDa, putative\tLmjF34.1250\tmRNA\ttaxon:347515\t20110105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1250\tLmjF.34.1250\t\tGO:0005829\tPMID:20551176\tISO\tGeneDB:Tb09.160.4460\tC\tPTP1-interacting protein, 39 kDa, putative\tLmjF34.1250\tmRNA\ttaxon:347515\t20110105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1250\tLmjF.34.1250\t\tGO:0006470\tPMID:20551176\tISO\tGeneDB:Tb09.160.4460\tP\tPTP1-interacting protein, 39 kDa, putative\tLmjF34.1250\tmRNA\ttaxon:347515\t20110105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1250\tLmjF.34.1250\t\tGO:0020015\tGO_REF:0000002\tEXP\t\tC\tPTP1-interacting protein, 39 kDa, putative\tLmjF34.1250\tmRNA\ttaxon:347515\t20100528\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1260\tPOLIA\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2950\tC\tmitochondrial DNA polymerase I protein A, putative\tLmjF34.1260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1550\tRH\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2720\tC\tATP dependent DEAD-box helicase, putative\tLmjF34.1550\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1550\tRH\t\tGO:0005761\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2720\tC\tATP dependent DEAD-box helicase, putative\tLmjF34.1550\tmRNA\ttaxon:347515\t20100820\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1550\tRH\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2720\tC\tATP dependent DEAD-box 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1580\tMCA5\t\tGO:0006915\tPMID:17107676\tIGI\t\tP\tamastin-like surface protein, putative\tLmjF34.1580\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1580\tMCA5\t\tGO:0008631\tPMID:17107676\tIGI\t\tP\tamastin-like surface protein, putative\tLmjF34.1580\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1580\tMCA5\t\tGO:0016540\tPMID:17107676\tIDA\t\tP\tamastin-like surface protein, putative\tLmjF34.1580\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1580\tMCA5\t\tGO:0070301\tPMID:17107676\tIGI\t\tP\tamastin-like surface protein, putative\tLmjF34.1580\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2000\tPPI\t\tGO:0005737\tPMID:17028008\tIDA\t\tC\tpyroglutamyl-peptidase I (C15 family)\tLmjF34.2000\tmRNA\ttaxon:347515\t20141211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2000\tPPI\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2670\tC\tpyroglutamyl-peptidase I (C15 family)\tLmjF34.2000\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2000\tPPI\t\tGO:0016920\tPMID:17028008\tIDA\t\tF\tpyroglutamyl-peptidase I (C15 family)\tLmjF34.2000\tmRNA\ttaxon:347515\t20141211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2000\tPPI\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2670\tC\tpyroglutamyl-peptidase I (C15 family)\tLmjF34.2000\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2000\tPPI\t\tGO:0005737\tPMID:17028008\tIDA\t\tC\tpyroglutamyl-peptidase I (C15 family)\tLmjF34.2000\tmRNA\ttaxon:347515\t20141211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2000\tPPI\t\tGO:0016920\tPMID:17028008\tIDA\t\tF\tpyroglutamyl-peptidase I (C15 family)\tLmjF34.2000\tmRNA\ttaxon:347515\t20141211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2010\tLmjF.34.2010\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2660\tC\thypothetical protein, conserved\tLmjF34.2010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2010\tLmjF.34.2010\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2660\tC\thypothetical protein, conserved\tLmjF34.2010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2020\tLmjF.34.2020\t\tGO:0005938\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2650\tC\tRegulator of chromosome condensation (RCC1) repeat, putative\tLmjF34.2020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2050\tLmjF.34.2050\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2630\tC\tATP-dependent RNA helicase, putative\tLmjF34.2050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2080\tLmjF.34.2080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2600\tC\thypothetical protein, conserved\tLmjF34.2080\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2080\tLmjF.34.2080\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2600\tC\thypothetical protein, conserved\tLmjF34.2080\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2110\tcls\t\tGO:0005739\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.2560\tC\tcardiolipin synthetase, putative\tLmjF34.2110\tmRNA\ttaxon:347515\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2110\tcls\t\tGO:0007005\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.2560\tP\tcardiolipin synthetase, putative\tLmjF34.2110\tmRNA\ttaxon:347515\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2110\tcls\t\tGO:0007007\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.2560\tP\tcardiolipin synthetase, putative\tLmjF34.2110\tmRNA\ttaxon:347515\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2110\tcls\t\tGO:0008808\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.2560\tF\tcardiolipin synthetase, putative\tLmjF34.2110\tmRNA\ttaxon:347515\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2110\tcls\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2560\tC\tcardiolipin synthetase, putative\tLmjF34.2110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2110\tcls\t\tGO:0032049\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.2560\tP\tcardiolipin synthetase, putative\tLmjF34.2110\tmRNA\ttaxon:347515\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2110\tcls\t\tGO:0033108\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.2560\tP\tcardiolipin synthetase, putative\tLmjF34.2110\tmRNA\ttaxon:347515\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2110\tcls\t\tGO:0033617\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.2560\tP\tcardiolipin synthetase, putative\tLmjF34.2110\tmRNA\ttaxon:347515\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2110\tcls\t\tGO:0034551\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.2560\tP\tcardiolipin synthetase, putative\tLmjF34.2110\tmRNA\ttaxon:347515\t20140424\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2120\tLmjF.34.2120\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2550\tC\thypothetical protein, conserved\tLmjF34.2120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2125\tLmjF.34.2125\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2540\tC\tubiquitin-like protein\tLmjF34.2125\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2125\tLmjF.34.2125\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2540\tC\tubiquitin-like protein\tLmjF34.2125\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2125\tLmjF.34.2125\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2540\tC\tubiquitin-like protein\tLmjF34.2125\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2140\tSIR2rp3\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2520\tC\tSilent information regulator 2 related protein 3\tLmjF34.2140\tmRNA\ttaxon:347515\t20141210\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2140\tSIR2rp3\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2520\tP\tSilent information regulator 2 related protein 3\tLmjF34.2140\tmRNA\ttaxon:347515\t20160712\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0004674\tGO_REF:0000011\tISM\tInterPro:IPR008271\tF\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0004686\tGO_REF:0000012\tISA\tUniProtKB:Q9NIV1\tF\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0004694\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506559.129|GeneDB:LinJ.34.1910\tF\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20160801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0005768\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506559.129\tC\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20160801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0010998\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506559.129|GeneDB:LinJ.34.1910\tP\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20160801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0010999\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506559.129\tP\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20160801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9NIV1\tC\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0020037\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506559.129\tF\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20160801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:1990578\tGO_REF:0000024\tISO\tGeneDB:LinJ.34.1910\tC\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20160801\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2170\tLmjF.34.2170\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2480\tC\t8-oxoguanine DNA glycosylase, putative\tLmjF34.2170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2190\tLmjF.34.2190\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tkinatase, putative\tLmjF34.2190\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2220\tLmjF.34.2220\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2430\tC\tEndonuclease/Exonuclease/phosphatase family, putative\tLmjF34.2220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2240\tLmjF.34.2240\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2410\tC\tGlycosyl hydrolase family 65 central catalytic domain/Glycosyl hydrolase family 65, C-terminal domain containing protein, putative\tLmjF34.2240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2250\tLmjF.34.2250\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2400\tC\tGalactose oxidase, central domain containing protein, putative\tLmjF34.2250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2270\tLmjF.34.2270\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2380\tC\tDynamin family, putative\tLmjF34.2270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2290\tTWF\t\tGO:0000022\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tP\ttwinfilin\tLmjF34.2290\tmRNA\ttaxon:347515\t20160105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2290\tTWF\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tC\ttwinfilin\tLmjF34.2290\tmRNA\ttaxon:347515\t20160105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2290\tTWF\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2350\tC\ttwinfilin\tLmjF34.2290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2290\tTWF\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tC\ttwinfilin\tLmjF34.2290\tmRNA\ttaxon:347515\t20160105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2290\tTWF\t\tGO:0072686\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tC\ttwinfilin\tLmjF34.2290\tmRNA\ttaxon:347515\t20160105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2290\tTWF\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2350\tC\ttwinfilin\tLmjF34.2290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2300\tLmjF.34.2300\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2340\tC\thypothetical protein, conserved\tLmjF34.2300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2310\tLmjF.34.2310\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2330\tC\thypothetical protein, conserved\tLmjF34.2310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2310\tLmjF.34.2310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2330\tC\thypothetical protein, conserved\tLmjF34.2310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2320\tLmjF.34.2320\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2320\tP\thypothetical protein, conserved\tLmjF34.2320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2340\tLmjF.34.2340\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2310\tC\tasparaginyl-tRNA synthetase, putative\tLmjF34.2340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2340\tLmjF.34.2340\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2310\tC\tasparaginyl-tRNA synthetase, putative\tLmjF34.2340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2370\tLmjF.34.2370\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2270\tC\thypothetical protein, conserved\tLmjF34.2370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2370\tLmjF.34.2370\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2270\tC\thypothetical protein, conserved\tLmjF34.2370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2370\tLmjF.34.2370\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2270\tC\thypothetical protein, conserved\tLmjF34.2370\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2410\tLmjF.34.2410\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2240\tC\tAminotransferase class IV, putative\tLmjF34.2410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2410\tLmjF.34.2410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2240\tC\tAminotransferase class IV, putative\tLmjF34.2410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2410\tLmjF.34.2410\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2240\tC\tAminotransferase class IV, putative\tLmjF34.2410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2420\tLmjF.34.2420\t\tGO:0004378\tGO_REF:0000012\tISA\tUniProtKB:ALG2_YEAST\tF\tdolichyl-P-Man:GDP-Man1GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF34.2420\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2420\tLmjF.34.2420\t\tGO:0006490\tGO_REF:0000012\tISA\tUniProtKB:ALG2_YEAST\tP\tdolichyl-P-Man:GDP-Man1GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF34.2420\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2420\tLmjF.34.2420\t\tGO:0033164\tGO_REF:0000012\tISA\tUniProtKB:ALG2_YEAST\tF\tdolichyl-P-Man:GDP-Man1GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF34.2420\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2420\tLmjF.34.2420\t\tGO:0097502\tGO_REF:0000012\tISA\tUniProtKB:ALG2_YEAST\tP\tdolichyl-P-Man:GDP-Man1GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF34.2420\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2430\tJ51\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2220\tC\tDNAj-like protein\tLmjF34.2430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2430\tJ51\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2220\tC\tDNAj-like protein\tLmjF34.2430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2450\tLmjF.34.2450\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2200\tC\tSec7 domain containing protein, putative\tLmjF34.2450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2473\tLmjF.34.2473\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2170\tP\thypothetical protein, conserved\tLmjF34.2473\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2480\tLmjF.34.2480\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2140\tC\thypothetical protein, conserved\tLmjF34.2480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2480\tLmjF.34.2480\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2140\tC\thypothetical protein, conserved\tLmjF34.2480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2480\tLmjF.34.2480\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2140\tP\thypothetical protein, conserved\tLmjF34.2480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2485\tLmjF.34.2485\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2130\tC\thypothetical protein, conserved\tLmjF34.2485\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2510\tLmjF.34.2510\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2110\tC\tprotein phosphatase 2C-like protein\tLmjF34.2510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2510\tLmjF.34.2510\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2110\tC\tprotein phosphatase 2C-like 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2530\tFAZ1\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3740\tC\tflagellar attachment zone protein, putative\tLmjF34.2530\tmRNA\ttaxon:347515\t20110927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2530\tFAZ1\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3740\tC\tflagellar attachment zone protein, putative\tLmjF34.2530\tmRNA\ttaxon:347515\t20110927\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2530\tFAZ1\t\tGO:0060271\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3740\tP\tflagellar attachment zone protein, putative\tLmjF34.2530\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2540\tCC2D\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2080\tC\tCoiled-coil and C2 domain-containing protein\tLmjF34.2540\tmRNA\ttaxon:347515\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2540\tCC2D\t\tGO:0044297\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2080\tC\tCoiled-coil and C2 domain-containing protein\tLmjF34.2540\tmRNA\ttaxon:347515\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2540\tCC2D\t\tGO:0060271\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2080\tP\tCoiled-coil and C2 domain-containing protein\tLmjF34.2540\tmRNA\ttaxon:347515\t20160602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2570\tFAZ8\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2060\tC\tFlagellum attachment zone protein 8\tLmjF34.2570\tmRNA\ttaxon:347515\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2580\tALBA3\t\tGO:0005515\tPMID:25294169\tIPI\tGeneDB:LmjF.06.0870\tF\tALBA-domain protein 3\tLmjF34.2580|Alba20\tmRNA\ttaxon:347515\t20160125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2580\tALBA3\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:LinJ.34.2410\tC\tALBA-domain protein 3\tLmjF34.2580|Alba20\tmRNA\ttaxon:347515\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2580\tALBA3\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LinJ.34.2410\tC\tALBA-domain protein 3\tLmjF34.2580|Alba20\tmRNA\ttaxon:347515\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2580\tALBA3\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LinJ.34.2410\tC\tALBA-domain protein 3\tLmjF34.2580|Alba20\tmRNA\ttaxon:347515\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2580\tALBA3\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2030\tC\tALBA-domain protein 3\tLmjF34.2580|Alba20\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2580\tALBA3\t\tGO:0034605\tGO_REF:0000024\tISO\tGeneDB:LinJ.34.2410\tP\tALBA-domain protein 3\tLmjF34.2580|Alba20\tmRNA\ttaxon:347515\t20160729\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2580\tALBA3\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2030\tC\tALBA-domain protein 3\tLmjF34.2580|Alba20\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2590\tAP3M\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2020\tP\tAP-3 complex subunit mu, putative\tLmjF34.2590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2590\tAP3M\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2020\tP\tAP-3 complex subunit mu, putative\tLmjF34.2590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2600\tLmjF.34.2600\t\tGO:0000062\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2010\tF\tacyl-CoA binding protein, putative\tLmjF34.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2600\tLmjF.34.2600\t\tGO:0006631\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2010\tP\tacyl-CoA binding protein, putative\tLmjF34.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2600\tLmjF.34.2600\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2010\tC\tacyl-CoA binding protein, putative\tLmjF34.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2610\tRUVBL\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2000\tC\truvB-like DNA helicase, putative\tLmjF34.2610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2610\tRUVBL\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.2000\tC\truvB-like DNA helicase, putative\tLmjF34.2610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2670\tLmjF.34.2670\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1950\tC\tNADPH-cytochrome p450 reductase-like protein\tLmjF34.2670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2670\tLmjF.34.2670\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1950\tC\tNADPH-cytochrome p450 reductase-like protein\tLmjF34.2670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2670\tLmjF.34.2670\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1950\tC\tNADPH-cytochrome p450 reductase-like protein\tLmjF34.2670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2680\tLmjF.34.2680\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1940\tC\tWD domain, G-beta repeat, putative\tLmjF34.2680\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2700\tEIF3G\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1930\tF\tEukaryotic translation initiation factor 3 subunit 4\tLmjF34.2700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2700\tEIF3G\t\tGO:0005737\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\tEukaryotic translation initiation factor 3 subunit 4\tLmjF34.2700\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2700\tEIF3G\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1930\tC\tEukaryotic translation initiation factor 3 subunit 4\tLmjF34.2700\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2700\tEIF3G\t\tGO:0005852\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\tEukaryotic translation initiation factor 3 subunit 4\tLmjF34.2700\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2730\tGPI16\t\tGO:0003923\tPMID:20382188\tISS\tUniProtKB:GPI16_YEAST\tF\tGPI transamidase subunit 16, putative\tLmjF34.2730\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2730\tGPI16\t\tGO:0016255\tPMID:20382188\tISS\tUniProtKB:GPI16_YEAST\tP\tGPI transamidase subunit 16, putative\tLmjF34.2730\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2730\tGPI16\t\tGO:0042765\tPMID:20382188\tISS\tUniProtKB:GPI16_YEAST\tC\tGPI transamidase subunit 16, putative\tLmjF34.2730\tmRNA\ttaxon:347515\t20140609\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2750\tLmjF.34.2750\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1900\tC\tmethyltransferase-like protein\tLmjF34.2750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2760\tLmjF.34.2760\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1890\tC\thypothetical protein, conserved\tLmjF34.2760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2760\tLmjF.34.2760\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1890\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2800\tLmjF.34.2800\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3390\tC\ttuzin, putative\tLmjF34.2800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2810\tLmjF.34.2810\t\tGO:0004181\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, Family M14\tLmjF34.2810\tmRNA\ttaxon:347515\t20120621\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2810\tLmjF.34.2810\t\tGO:0005524\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2810\tLmjF.34.2810\t\tGO:0008270\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, Family M14\tLmjF34.2810\tmRNA\ttaxon:347515\t20120621\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2810\tLmjF.34.2810\t\tGO:0043531\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, Family M14\tLmjF34.2810\tmRNA\ttaxon:347515\t20120621\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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related modifier (urm1)-like protein\tLmjF34.2830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2830\tLmjF.34.2830\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1830\tC\tubiquitin related modifier (urm1)-like protein\tLmjF34.2830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2840\tSELB\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1820\tC\tselenocysteine-specific elongation factor, putative\tLmjF34.2840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2850\tSAT\t\tGO:0006535\tPMID:19296828\tIDA\t\tP\tserine acetyltransferase\tLmjF34.2850\tmRNA\ttaxon:347515\t20090720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2850\tSAT\t\tGO:0009001\tPMID:19296828\tIDA\t\tF\tserine acetyltransferase\tLmjF34.2850\tmRNA\ttaxon:347515\t20090720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2860\tLmjF.34.2860\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1810\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2950\tLmjF.34.2950\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1740\tC\tEF-hand domain pair, putative\tLmjF34.2950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2970\tNuSAP4\t\tGO:0000922\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1730\tC\tNucleus and spindle associated protein 4, putative\tLmjF34.2970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2970\tNuSAP4\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1730\tC\tNucleus and 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2970\tNuSAP4\t\tGO:0005819\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1730\tC\tNucleus and spindle associated protein 4, putative\tLmjF34.2970\tmRNA\ttaxon:347515\t20180627\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2980\tNDPK3\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1720\tC\tNucleoside diphosphate kinase 3\tLmjF34.2980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF34.3010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3030\tLmjF.34.3030\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1690\tC\tRetinal Maintenance, putative\tLmjF34.3030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3030\tLmjF.34.3030\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1690\tC\tRetinal Maintenance, putative\tLmjF34.3030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3030\tLmjF.34.3030\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1690\tC\tRetinal Maintenance, putative\tLmjF34.3030\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3040\tLmjF.34.3040\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1680\tC\thypothetical protein, conserved\tLmjF34.3040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3040\tLmjF.34.3040\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1680\tC\thypothetical protein, conserved\tLmjF34.3040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3050\tPOMP29\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1670\tC\tPresent in the outer mitochondrial membrane proteome 29\tLmjF34.3050\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3060\tLmjF.34.3060\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1660\tC\tmitochondrial carrier protein-like protein\tLmjF34.3060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3060\tLmjF.34.3060\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1660\tC\tmitochondrial carrier protein-like protein\tLmjF34.3060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3070\tLmjF.34.3070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1650\tC\thypothetical protein, conserved (pseudogene)\tLmjF34.3070\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3070\tLmjF.34.3070\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1650\tC\thypothetical protein, conserved (pseudogene)\tLmjF34.3070\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3070\tLmjF.34.3070\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1650\tC\thypothetical protein, conserved (pseudogene)\tLmjF34.3070\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3080\tLmjF.34.3080\t\tGO:0000176\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1630\tC\texosome subunit rrp6p homologue, putative\tLmjF34.3080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3080\tLmjF.34.3080\t\tGO:0000177\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1630\tC\texosome subunit rrp6p homologue, putative\tLmjF34.3080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3080\tLmjF.34.3080\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1630\tC\texosome subunit rrp6p homologue, putative\tLmjF34.3080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3080\tLmjF.34.3080\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1630\tC\texosome subunit rrp6p homologue, putative\tLmjF34.3080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3080\tLmjF.34.3080\t\tGO:0006364\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1630\tP\texosome subunit rrp6p homologue, putative\tLmjF34.3080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3090\tPIPKA\t\tGO:0016307\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1620\tF\tphosphatidylinositol 4-phosphate 5-kinase alpha, putative\tLmjF34.3090|PIP5KII-alpha\tmRNA\ttaxon:347515\t20150618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3090\tPIPKA\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1620\tC\tphosphatidylinositol 4-phosphate 5-kinase alpha, putative\tLmjF34.3090|PIP5KII-alpha\tmRNA\ttaxon:347515\t20150618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3090\tPIPKA\t\tGO:0046488\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1620\tP\tphosphatidylinositol 4-phosphate 5-kinase alpha, putative\tLmjF34.3090|PIP5KII-alpha\tmRNA\ttaxon:347515\t20150618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3100\tLmjF.34.3100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1610\tC\thypothetical protein, conserved\tLmjF34.3100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3100\tLmjF.34.3100\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1610\tC\thypothetical protein, conserved\tLmjF34.3100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3120\tLPG2\t\tGO:0002578\tPMID:19487470\tIMP\t\tP\tlipophosphoglycan biosynthetic protein (lpg2)\tLmjF34.3120\tmRNA\ttaxon:347515\t20100616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3120\tLPG2\t\tGO:0005458\tPMID:9013638|GO_REF:0000024\tISO\tGeneDB:Tb927.4.1640\tF\tlipophosphoglycan biosynthetic protein (lpg2)\tLmjF34.3120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3120\tLPG2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1640\tC\tlipophosphoglycan biosynthetic protein (lpg2)\tLmjF34.3120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3120\tLPG2\t\tGO:0005794\tPMID:9013638\tIDA\t\tC\tlipophosphoglycan biosynthetic protein (lpg2)\tLmjF34.3120\tmRNA\ttaxon:347515\t20100616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3120\tLPG2\t\tGO:0015784\tPMID:9013638\tIMP\t\tP\tlipophosphoglycan biosynthetic protein (lpg2)\tLmjF34.3120\tmRNA\ttaxon:347515\t20100616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3120\tLPG2\t\tGO:0032695\tPMID:19487470\tIMP\t\tP\tlipophosphoglycan biosynthetic protein (lpg2)\tLmjF34.3120\tmRNA\ttaxon:347515\t20100616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3120\tLPG2\t\tGO:0052553\tPMID:19487470\tIMP\t\tP\tlipophosphoglycan biosynthetic protein (lpg2)\tLmjF34.3120\tmRNA\ttaxon:347515\t20100616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3130\tLmjF.34.3130\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1590\tC\tPresent in the outer mitochondrial membrane proteome 28\tLmjF34.3130\tmRNA\ttaxon:347515\t20150904\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3140\tLmjF.34.3140\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1580\tC\thypothetical protein, conserved\tLmjF34.3140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3140\tLmjF.34.3140\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1580\tC\thypothetical protein, conserved\tLmjF34.3140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3160\tLmjF.34.3160\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1560\tC\thypothetical protein, conserved\tLmjF34.3160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3190\tPOMP27\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1540\tC\tPresent in the outer mitochondrial membrane proteome 27\tLmjF34.3190\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3190\tPOMP27\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1540\tC\tPresent in the outer mitochondrial membrane proteome 27\tLmjF34.3190\tmRNA\ttaxon:347515\t20150914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3190\tPOMP27\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1540\tP\tPresent in the outer mitochondrial membrane proteome 27\tLmjF34.3190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3200\tLmjF.34.3200\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1530\tC\thypothetical protein, conserved\tLmjF34.3200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3210\tLmjF.34.3210\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1520\tC\thypothetical protein, conserved\tLmjF34.3210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3210\tLmjF.34.3210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1520\tC\thypothetical protein, conserved\tLmjF34.3210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3220\tLmjF.34.3220\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1510\tC\taminophospholipid translocase, putative\tLmjF34.3220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3220\tLmjF.34.3220\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1510\tC\taminophospholipid translocase, putative\tLmjF34.3220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0003723\tPMID:22396527\tISO\tGeneDB:Tb927.4.1500\tF\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20120911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0003729\tPMID:19850921\tISO\tGeneDB:Tb927.4.1500\tF\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20100415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0005739\tPMID:19850921\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20100415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0016554\tPMID:22396527\tISO\tGeneDB:Tb927.4.1500\tP\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20120911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0016556\tPMID:19850921\tISO\tGeneDB:Tb927.4.1500\tP\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20100415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0031019\tPMID:19850921\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20100415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0034458\tPMID:19850921\tISO\tGeneDB:Tb927.4.1500\tF\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20100415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0048255\tPMID:22396527\tISO\tGeneDB:Tb927.4.1500\tP\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20120911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0003723\tPMID:22396527\tISO\tGeneDB:Tb927.4.1500\tF\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20120911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0003729\tPMID:19850921\tISO\tGeneDB:Tb927.4.1500\tF\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20100415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0031019\tPMID:19850921\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20100415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1500\tC\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0034458\tPMID:19850921\tISO\tGeneDB:Tb927.4.1500\tF\tRNA editing associated helicase 2, putative\tLmjF34.3230\tmRNA\ttaxon:347515\t20100415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3230\tREH2\t\tGO:0048255\tPMID:22396527\tISO\tGeneDB:Tb927.4.1500\tP\tRNA editing associated helicase 2, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3240\tLmjF.34.3240\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1490\tC\thypothetical protein, conserved\tLmjF34.3240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3250\tLmjF.34.3250\t\tGO:0004737\tGO_REF:0000024\tISA\tUniProtKB:PDC5_YEAST\tF\tAlpha-keto-acid decarboxylase, putative\tLmjF34.3250\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3250\tLmjF.34.3250\t\tGO:0006090\tGO_REF:0000024\tISA\tUniProtKB:PDC5_YEAST\tP\tAlpha-keto-acid decarboxylase, putative\tLmjF34.3250\tmRNA\ttaxon:347515\t20140610\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3260\tLmjF.34.3260\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1480\tC\tDNA repair metallo-beta-lactamase, putative\tLmjF34.3260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3260\tLmjF.34.3260\t\tGO:0006281\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1480\tP\tDNA repair metallo-beta-lactamase, putative\tLmjF34.3260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3260\tLmjF.34.3260\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1480\tC\tDNA repair metallo-beta-lactamase, putative\tLmjF34.3260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3260\tLmjF.34.3260\t\tGO:0036297\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1480\tP\tDNA repair metallo-beta-lactamase, putative\tLmjF34.3260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3270\tLmjF.34.3270\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1470\tC\tDomain of unknown function (DUF4379), putative\tLmjF34.3270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3270\tLmjF.34.3270\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1470\tC\tDomain of unknown function (DUF4379), putative\tLmjF34.3270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3280\tLmjF.34.3280\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1460\tC\tZn-finger in ubiquitin-hydrolases and other protein, putative\tLmjF34.3280\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3300\tLmjF.34.3300\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1440\tC\tUncharacterized protein family UPF0054, putative\tLmjF34.3300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3300\tLmjF.34.3300\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1440\tC\tUncharacterized protein family UPF0054, putative\tLmjF34.3300\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3350\tLmjF.34.3350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1400\tC\tATPase-like protein\tLmjF34.3350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3360\tLmjF.34.3360\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1380\tC\tD-Tyr-tRNA(Tyr) deacylase, putative\tLmjF34.3360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3360\tLmjF.34.3360\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1380\tC\tD-Tyr-tRNA(Tyr) deacylase, putative\tLmjF34.3360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3360\tLmjF.34.3360\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1380\tC\tD-Tyr-tRNA(Tyr) deacylase, putative\tLmjF34.3360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3380\tLmjF.34.3380\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1360\tC\taldose 1-epimerase-like protein\tLmjF34.3380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3430\tLmjF.34.3430\t\tGO:0000365\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1340\tP\tcleavage and polyadenylation specificity factor, putative\tLmjF34.3430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3430\tLmjF.34.3430\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1340\tC\tcleavage and polyadenylation specificity factor, putative\tLmjF34.3430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3460\tLmjF.34.3460\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1310\tC\thypothetical protein, conserved\tLmjF34.3460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3460\tLmjF.34.3460\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1310\tC\thypothetical protein, conserved\tLmjF34.3460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3510\tLmjF.34.3510\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1260\tC\thypothetical protein, conserved\tLmjF34.3510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3520\tLmjF.34.3520\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1250\tC\tperoxisome biosynthesis protein-like protein\tLmjF34.3520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3700\tLmjF.34.3700\t\tGO:0035299\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1050\tF\tinositol-pentakisphosphate 2-kinase, putative\tLmjF34.3700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3700\tLmjF.34.3700\t\tGO:0052746\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1050\tP\tinositol-pentakisphosphate 2-kinase, putative\tLmjF34.3700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3710\tLmjF.34.3710\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1040\tC\thypothetical protein, conserved\tLmjF34.3710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3710\tLmjF.34.3710\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1040\tC\thypothetical protein, conserved\tLmjF34.3710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3710\tLmjF.34.3710\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1040\tC\thypothetical protein, conserved\tLmjF34.3710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3710\tLmjF.34.3710\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1040\tC\thypothetical protein, conserved\tLmjF34.3710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3720\tLmjF.34.3720\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1030\tC\tProtein of unknown function (DUF501), putative\tLmjF34.3720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3720\tLmjF.34.3720\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1030\tC\tProtein of unknown function (DUF501), putative\tLmjF34.3720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3720\tLmjF.34.3720\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.1030\tC\tProtein of unknown function (DUF501), putative\tLmjF34.3720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3740\tLmjF.34.3740\t\tGO:0005783\tPMID:15953549|GO_REF:0000024\tISO\tGeneDB:Tb927.4.1020\tC\tserine palmitoyltransferase-like protein\tLmjF34.3740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3740\tLmjF.34.3740\t\tGO:0006643\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.4.1020\tP\tserine palmitoyltransferase-like protein\tLmjF34.3740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3760\tLmjF.34.3760\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.980\tC\tactin-like protein, putative\tLmjF34.3760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3760\tLmjF.34.3760\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.980\tC\tactin-like protein, putative\tLmjF34.3760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3815\tLmjF.34.3815\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.930\tC\tribosomal protein L14, putative\tLmjF34.3815\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3850\tLmjF.34.3850\t\tGO:0006833\tPMID:15294911\tIDA\t\tP\taquaporin 2, putative\tLmjF34.3850\tmRNA\ttaxon:347515\t20101103\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3850\tLmjF.34.3850\t\tGO:0015250\tPMID:15294911\tIDA\t\tF\taquaporin 2, putative\tLmjF34.3850\tmRNA\ttaxon:347515\t20101103\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3850\tLmjF.34.3850\t\tGO:0016021\tPMID:11152613\tISS\t\tC\taquaporin 2, putative\tLmjF34.3850\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3860\tSMD3\t\tGO:0005682\tPMID:20592024\tIDA\t\tC\tsmall nuclear ribonucleoprotein sm d3\tLmjF34.3860\tmRNA\ttaxon:347515\t20160111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3860\tSMD3\t\tGO:0005685\tPMID:20592024\tIDA\t\tC\tsmall nuclear ribonucleoprotein sm d3\tLmjF34.3860\tmRNA\ttaxon:347515\t20160111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3860\tSMD3\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.890\tC\tsmall nuclear ribonucleoprotein sm d3\tLmjF34.3860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3860\tSMD3\t\tGO:0071024\tPMID:20592024\tIDA\t\tC\tsmall nuclear ribonucleoprotein sm d3\tLmjF34.3860\tmRNA\ttaxon:347515\t20160111\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3880\tLmjF.34.3880\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.870\tC\tdynein heavy chain, putative\tLmjF34.3880\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3890\tLmjF.34.3890\t\tGO:0020022\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.860\tC\thypothetical protein, conserved\tLmjF34.3890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3900\tLmjF.34.3900\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.840\tC\tHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase, putative\tLmjF34.3900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3920\tLmjF.34.3920\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.820\tC\tNLI interacting factor-like phosphatase, putative\tLmjF34.3920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3940\tTOR3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.800\tC\ttarget of rapamycin kinase 3\tLmjF34.3940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3940\tTOR3\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.800\tC\ttarget of rapamycin kinase 3\tLmjF34.3940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3940\tTOR3\t\tGO:0042149\tPMID:20551225\tIMP\t\tP\ttarget of rapamycin kinase 3\tLmjF34.3940\tmRNA\ttaxon:347515\t20100624\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3940\tTOR3\t\tGO:0047484\tPMID:20551225\tIMP\t\tP\ttarget of rapamycin kinase 3\tLmjF34.3940\tmRNA\ttaxon:347515\t20100624\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3950\tLmjF.34.3950\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.790\tC\thypothetical protein, conserved\tLmjF34.3950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3960\tLmjF.34.3960\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.770\tC\tHECT-domain (ubiquitin-transferase), putative\tLmjF34.3960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3960\tLmjF.34.3960\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.770\tC\tHECT-domain (ubiquitin-transferase), putative\tLmjF34.3960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3970\tLmjF.34.3970\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.760\tP\tAP-1 adapter complex gamma subunit, putative\tLmjF34.3970\tmRNA\ttaxon:347515\t20150105\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3980\tLmjF.34.3980\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.750\tC\tnucleolar protein family a member-like protein\tLmjF34.3980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3980\tLmjF.34.3980\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.750\tC\tnucleolar protein family a member-like protein\tLmjF34.3980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3980\tLmjF.34.3980\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.750\tC\tnucleolar protein family a member-like protein\tLmjF34.3980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4000\tLmjF.34.4000\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.730\tC\tPeptidase family C78, putative\tLmjF34.4000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4050\tLmjF.34.4050\t\tGO:0009372\tPMID:24336212|GO_REF:0000024\tISO\tGeneDB:Tb927.4.670\tP\tconserved protein, unknown function\tLmjF34.4050\tmRNA\ttaxon:347515\t20191022\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4050\tLmjF.34.4050\t\tGO:0044145\tPMID:24336212|GO_REF:0000024\tISO\tGeneDB:Tb927.4.670\tP\tconserved protein, unknown function\tLmjF34.4050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4070\tLmjF.34.4070\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.660\tC\thypothetical protein, conserved\tLmjF34.4070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4090\tLmjF.34.4090\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.640\tP\tGRIP domain containing protein, putative\tLmjF34.4090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4100\tMIC34\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.630\tC\tMICOS complex subunit MIC34, putative\tLmjF34.4100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4100\tMIC34\t\tGO:0061617\tPMID:30415698\tISO\tGeneDB:Tb927.4.630\tC\tMICOS complex subunit MIC34, putative\tLmjF34.4100\tmRNA\ttaxon:347515\t20181211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4110\tLmjF.34.4110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.620\tC\thypothetical protein, conserved\tLmjF34.4110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4110\tLmjF.34.4110\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.620\tC\thypothetical protein, conserved\tLmjF34.4110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4120\tLmjF.34.4120\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.600\tC\tAlpha/beta hydrolase family, putative\tLmjF34.4120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4120\tLmjF.34.4120\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.600\tC\tAlpha/beta hydrolase family, putative\tLmjF34.4120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4120\tLmjF.34.4120\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.600\tC\tAlpha/beta hydrolase family, putative\tLmjF34.4120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4130\tLmjF.34.4130\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.590\tP\tProtein of unknown function (DUF1620), putative\tLmjF34.4130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4160\tLmjF.34.4160\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.870\tC\tCytoplasmic dynein 2 heavy chain (DYNC2H1), putative\tLmjF34.4160\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4160\tLmjF.34.4160\t\tGO:0007052\tPMID:17897317\tISO\tGeneDB:Tb927.4.560\tP\tCytoplasmic dynein 2 heavy chain (DYNC2H1), putative\tLmjF34.4160\tmRNA\ttaxon:347515\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4160\tLmjF.34.4160\t\tGO:0007059\tPMID:17897317\tISO\tGeneDB:Tb927.4.560\tP\tCytoplasmic dynein 2 heavy chain (DYNC2H1), putative\tLmjF34.4160\tmRNA\ttaxon:347515\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4160\tLmjF.34.4160\t\tGO:0030286\tPMID:17897317\tISO\tGeneDB:Tb927.4.560\tC\tCytoplasmic dynein 2 heavy chain (DYNC2H1), putative\tLmjF34.4160\tmRNA\ttaxon:347515\t20091113\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4160\tLmjF.34.4160\t\tGO:0072382\tPMID:17897317\tISO\tGeneDB:Tb927.4.560\tP\tCytoplasmic dynein 2 heavy chain (DYNC2H1), putative\tLmjF34.4160\tmRNA\ttaxon:347515\t20110419\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4170\tLmjF.34.4170\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.550\tP\tZinc knuckle, putative\tLmjF34.4170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4220\tLmjF.34.4220\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.520\tC\thypothetical protein, conserved\tLmjF34.4220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4240\tLmjF.34.4240\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.500\tC\tFHA domain containing protein, putative\tLmjF34.4240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4250\tLmjF.34.4250\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.490\tC\thypothetical protein, conserved\tLmjF34.4250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4270\tLmjF.34.4270\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.480\tC\tCullin binding, putative\tLmjF34.4270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4270\tLmjF.34.4270\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.480\tC\tCullin binding, putative\tLmjF34.4270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4270\tLmjF.34.4270\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.480\tC\tCullin binding, putative\tLmjF34.4270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4290\tLmjF.34.4290\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.470\tF\tnucleolar protein family a, putative\tLmjF34.4290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4290\tLmjF.34.4290\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.470\tC\tnucleolar protein family a, putative\tLmjF34.4290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4290\tLmjF.34.4290\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.470\tC\tnucleolar protein family a, putative\tLmjF34.4290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4320\tLmjF.34.4320\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4320\tmRNA\ttaxon:347515\t20150127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4340\tLmjF.34.4340\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.430\tC\t20s proteasome beta 7 subunit, (putative)\tLmjF34.4340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4340\tLmjF.34.4340\t\tGO:0019774\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.430\tC\t20s proteasome beta 7 subunit, (putative)\tLmjF34.4340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4340\tLmjF.34.4340\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.430\tC\t20s proteasome beta 7 subunit, (putative)\tLmjF34.4340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4340\tLmjF.34.4340\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.430\tC\t20s proteasome beta 7 subunit, (putative)\tLmjF34.4340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4350\tLmjF.34.4350\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4350\tmRNA\ttaxon:347515\t20150127\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4400\tLmjF.34.4400\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.430\tC\t20s proteasome beta 7 subunit, (putative)\tLmjF34.4400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4400\tLmjF.34.4400\t\tGO:0019774\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.430\tC\t20s proteasome beta 7 subunit, (putative)\tLmjF34.4400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4520\tLmjF.34.4520\t\tGO:0019774\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.430\tC\tproteasome beta 7 subunit, putative\tLmjF34.4520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4520\tLmjF.34.4520\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.430\tC\tproteasome beta 7 subunit, putative\tLmjF34.4520\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4530\tTOR2\t\tGO:1903939\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.420\tP\tTarget of rapamycin kinase 2\tLmjF34.4530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4540\tDIP13\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14110\tP\t13 kDa deflagellation-inducible protein, putative\tLmjF34.4540\tmRNA\ttaxon:347515\t20170621\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4580\tLmjF.34.4580\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.380\tC\thypothetical protein, conserved\tLmjF34.4580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4580\tLmjF.34.4580\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.380\tC\thypothetical protein, conserved\tLmjF34.4580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4580\tLmjF.34.4580\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.380\tC\thypothetical protein, conserved\tLmjF34.4580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4600\tLmjF.34.4600\t\tGO:0005829\tPMID:18364711\tRCA\t\tC\t1,2-Dihydroxy-3-keto-5-methylthiopentene dioxygenase, putative\tLmjF34.4600\tmRNA\ttaxon:347515\t20100826\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4600\tLmjF.34.4600\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.4.360\tC\t1,2-Dihydroxy-3-keto-5-methylthiopentene dioxygenase, putative\tLmjF34.4600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4620\tLmjF.34.4620\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF34.4620\tmRNA\ttaxon:347515\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0020\tPYK\t\tGO:0043531\tPMID:8078522\tISO\tGeneDB:LmxM.34.0020|GeneDB:LmxM.34.0030\tF\tpyruvate kinase\tLmjF35.0020\tpseudogenic_transcript\ttaxon:347515\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0030\tPYK\t\tGO:0043531\tPMID:8078522\tISO\tGeneDB:LmxM.34.0020|GeneDB:LmxM.34.0030\tF\tpyruvate kinase\tLmjF35.0030\tmRNA\ttaxon:347515\t20090407\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0070\tLmjF.35.0070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4310\tC\tprohibitin, putative\tLmjF35.0070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0070\tLmjF.35.0070\t\tGO:0070129\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4310\tP\tprohibitin, putative\tLmjF35.0070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0080\tHKT1\t\tGO:0006813\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4300\tP\tTrk system potassium uptake protein\tLmjF35.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0080\tHKT1\t\tGO:0055075\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4300\tP\tTrk system potassium uptake protein\tLmjF35.0080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0100\tLmjF.35.0100\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4280\tC\tubiquinol-cytochrome c reductase complex 14kD subunit, putative\tLmjF35.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0100\tLmjF.35.0100\t\tGO:0005750\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4280\tC\tubiquinol-cytochrome c reductase complex 14kD subunit, putative\tLmjF35.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0100\tLmjF.35.0100\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4280\tC\tubiquinol-cytochrome c reductase complex 14kD subunit, putative\tLmjF35.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0110\tLmjF.35.0110\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4270\tC\tcoatomer subunit zeta, putative\tLmjF35.0110\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0130\tARL2\t\tGO:0000281\tPMID:20653091|GO_REF:0000024\tISO\tGeneDB:Tb927.10.4250\tP\tADP-ribosylation factor-like 2, arl2, putative\tLmjF35.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0130\tARL2\t\tGO:0005737\tPMID:20653091|GO_REF:0000024\tISO\tGeneDB:Tb927.10.4250\tC\tADP-ribosylation factor-like 2, arl2, putative\tLmjF35.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0150\tLmjF.35.0150\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4230\tC\thypothetical protein, conserved\tLmjF35.0150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0180\tLmjF.35.0180\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4200\tC\thypothetical protein, conserved\tLmjF35.0180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0190\tLmjF.35.0190\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4180\tC\tNLI interacting factor-like phosphatase, putative\tLmjF35.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0190\tLmjF.35.0190\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4180\tC\tNLI interacting factor-like phosphatase, putative\tLmjF35.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0200\tLmjF.35.0200\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4170\tC\thypothetical protein, conserved\tLmjF35.0200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0200\tLmjF.35.0200\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4170\tC\thypothetical protein, conserved\tLmjF35.0200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0210\tLmjF.35.0210\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4140\tC\tProtein of unknown function (DUF1242), putative\tLmjF35.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0220\tLmjF.35.0220\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4130\tC\thypothetical protein, conserved\tLmjF35.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0220\tLmjF.35.0220\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4130\tC\thypothetical protein, conserved\tLmjF35.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0230\tLmjF.35.0230\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF35.0230\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0250\tLmjF.35.0250\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4100\tC\thypothetical protein, conserved\tLmjF35.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0250\tLmjF.35.0250\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4100\tC\thypothetical protein, conserved\tLmjF35.0250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0270\tLmjF.35.0270\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4090\tC\thypothetical protein, conserved\tLmjF35.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0270\tLmjF.35.0270\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4090\tC\thypothetical protein, conserved\tLmjF35.0270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0290\tLmjF.35.0290\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4080\tC\thypothetical protein, conserved\tLmjF35.0290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0290\tLmjF.35.0290\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4080\tC\thypothetical protein, conserved\tLmjF35.0290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0300\tLmjF.35.0300\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4070\tC\thypothetical protein, conserved\tLmjF35.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0310\tLmjF.35.0310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4060\tC\tAnkyrin repeats (3 copies), putative\tLmjF35.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0310\tLmjF.35.0310\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4060\tC\tAnkyrin repeats (3 copies), putative\tLmjF35.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0310\tLmjF.35.0310\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4060\tC\tAnkyrin repeats (3 copies), putative\tLmjF35.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0320\tLmjF.35.0320\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4050\tC\tserine palmitoyltransferase, putative\tLmjF35.0320\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0330\tLmjF.35.0330\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4040\tC\t3-keto-dihydrosphingosine reductase\tLmjF35.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0330\tLmjF.35.0330\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4040\tC\t3-keto-dihydrosphingosine reductase\tLmjF35.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0330\tLmjF.35.0330\t\tGO:0005789\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.10.4040\tC\t3-keto-dihydrosphingosine reductase\tLmjF35.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0330\tLmjF.35.0330\t\tGO:0006633\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.10.4040\tP\t3-keto-dihydrosphingosine reductase\tLmjF35.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0330\tLmjF.35.0330\t\tGO:0047560\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.10.4040\tF\t3-keto-dihydrosphingosine reductase\tLmjF35.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0370\tLmjF.35.0370\t\tGO:0000932\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3990\tC\tATP-dependent DEAD-box RNA helicase, putative\tLmjF35.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0370\tLmjF.35.0370\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3990\tF\tATP-dependent DEAD-box RNA helicase, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0390\tLmjF.35.0390\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3950\tP\thypothetical protein, conserved\tLmjF35.0390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0400\tLmjF.35.0400\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3940\tC\t40S ribosomal protein S3A, putative\tLmjF35.0400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0410\tLmjF.35.0410\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3940\tC\t40S ribosomal protein 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0490\tLmjF.35.0490\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3900\tC\tCAMK/CAMKL family protein kinase, putative\tLmjF35.0490\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0560\tLmjF.35.0560\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3890\tC\tphosphatidylinositol-4-phosphate 5-kinase-like, putative\tLmjF35.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0670\tLmjF.35.0670\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3790\tC\thypothetical protein, conserved\tLmjF35.0670\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0690\tLmjF.35.0690\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3770\tC\tTetratricopeptide repeat, putative\tLmjF35.0690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0700\tLmjF.35.0700\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3760\tC\tvacuolar ATP 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0720\tLmjF.35.0720\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3740\tC\thypothetical protein, conserved\tLmjF35.0720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0730\tLmjF.35.0730\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3730\tC\thypothetical protein, conserved\tLmjF35.0730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"TriTrypDB\tLmjF.35.0830\tLmjF.35.0830\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3650\tC\tNADH-dependent fumarate reductase-like protein\tLmjF35.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0830\tLmjF.35.0830\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3650\tC\tNADH-dependent fumarate reductase-like protein\tLmjF35.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0830\tLmjF.35.0830\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3650\tC\tNADH-dependent fumarate reductase-like 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0840\tNP\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3640\tC\tnuclear transmembrane protein, putative\tLmjF35.0840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0860\tLmjF.35.0860\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3630\tC\thypothetical protein, conserved\tLmjF35.0860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0860\tLmjF.35.0860\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.3630\tC\thypothetical protein, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0890\tMIC17\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.690\tC\tMICOS complex subunit MIC17, putative\tLmjF35.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0890\tMIC17\t\tGO:0061617\tPMID:30415698\tISO\tGeneDB:Tb927.5.690\tC\tMICOS complex subunit MIC17, putative\tLmjF35.0890\tmRNA\ttaxon:347515\t20181211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0890\tMIC17\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.690\tC\tMICOS complex subunit MIC17, putative\tLmjF35.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0940\tLmjF.35.0940\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.750\tP\thypothetical protein, conserved\tLmjF35.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0950\tLmjF.35.0950\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.760\tC\tcell cycle sequence binding phosphoprotein (RBP33), putative\tLmjF35.0950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0950\tLmjF.35.0950\t\tGO:0051219\tPMID:15470247\tISO\tUniProtKB:Q643Z2_CRIFA\tF\tcell cycle sequence binding phosphoprotein (RBP33), putative\tLmjF35.0950\tmRNA\ttaxon:347515\t20101102\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0990\tLmjF.35.0990\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.780\tC\thypothetical protein, conserved\tLmjF35.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0990\tLmjF.35.0990\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.780\tC\thypothetical protein, conserved\tLmjF35.0990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1010\tCK1.2\t\tGO:0004674\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.800\tF\tcasein kinase, putative\tLmjF35.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1010\tCK1.2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.800\tC\tcasein kinase, putative\tLmjF35.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1010\tCK1.2\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.800\tC\tcasein kinase, putative\tLmjF35.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1010\tCK1.2\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.800\tC\tcasein kinase, putative\tLmjF35.1010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1020\tLmjF.35.1020\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, unknown function\tLmjF35.1020\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1040\tZC3H11\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.810\tF\tzinc finger CCCH domain containing protein 11\tLmjF35.1040\tmRNA\ttaxon:347515\t20150612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1040\tZC3H11\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.810\tC\tzinc finger CCCH domain containing protein 11\tLmjF35.1040\tmRNA\ttaxon:347515\t20150612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1040\tZC3H11\t\tGO:0009408\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.810\tP\tzinc finger CCCH domain containing protein 11\tLmjF35.1040\tmRNA\ttaxon:347515\t20150612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1040\tZC3H11\tNOT\tGO:0042803\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.810\tF\tzinc finger CCCH domain containing protein 11\tLmjF35.1040\tmRNA\ttaxon:347515\t20150612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1040\tZC3H11\t\tGO:0048255\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.810\tP\tzinc finger CCCH domain containing protein 11\tLmjF35.1040\tmRNA\ttaxon:347515\t20150612\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1080\tTAC65\t\tGO:0033955\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.830\tP\tTripartite attachment complex protein 65\tLmjF35.1080\tmRNA\ttaxon:347515\t20160725\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1080\tTAC65\tNOT\tGO:0070096\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.830\tP\tTripartite attachment complex protein 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1130\tLmjF.35.1130\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.900\tC\toligosaccharyl transferase-like protein\tLmjF35.1130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1130\tLmjF.35.1130\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.900\tC\toligosaccharyl transferase-like protein\tLmjF35.1130\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1140\tLmjF.35.1140\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.900\tC\toligosaccharyl 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1150\tLmjF.35.1150\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.900\tC\toligosaccharyl transferase-like protein\tLmjF35.1150\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1160\tLmjF.35.1160\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.900\tC\toligosaccharyl transferase subunit, putative\tLmjF35.1160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1160\tLmjF.35.1160\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.900\tC\toligosaccharyl transferase subunit, putative\tLmjF35.1160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1160\tLmjF.35.1160\t\tGO:0008250\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.910\tC\toligosaccharyl transferase subunit, putative\tLmjF35.1160\tmRNA\ttaxon:347515\t20100914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1180\tLmjF.35.1180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.940\tC\tNADH-dependent fumarate reductase, putative\tLmjF35.1180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1180\tLmjF.35.1180\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.930\tC\tNADH-dependent fumarate reductase, putative\tLmjF35.1180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1180\tLmjF.35.1180\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.940\tC\tNADH-dependent fumarate reductase, putative\tLmjF35.1180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1190\tLmjF.35.1190\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.940\tC\tNADH-dependent fumarate reductase, putative\tLmjF35.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1190\tLmjF.35.1190\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.930\tC\tNADH-dependent fumarate reductase, putative\tLmjF35.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1190\tLmjF.35.1190\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.940\tC\tNADH-dependent fumarate reductase, putative\tLmjF35.1190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1200\tLmjF.35.1200\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1150\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\tLmjF35.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1200\tLmjF.35.1200\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1150\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\tLmjF35.1200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1200\tLmjF.35.1200\t\tGO:0008380\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1150\tP\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\tLmjF35.1200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1250\tLmjF.35.1250\t\tGO:0004362\tPMID:18669638\tISO\tGeneDB:Tb927.5.950\tF\tmonothiol glutaredoxin, putative\tLmjF35.1250\tmRNA\ttaxon:347515\t20110607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1250\tLmjF.35.1250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.950\tC\tmonothiol glutaredoxin, putative\tLmjF35.1250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1250\tLmjF.35.1250\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.950\tC\tmonothiol glutaredoxin, putative\tLmjF35.1250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1250\tLmjF.35.1250\t\tGO:0045454\tPMID:18669638\tISO\tGeneDB:Tb927.5.950\tP\tmonothiol glutaredoxin, putative\tLmjF35.1250\tmRNA\ttaxon:347515\t20110607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1250\tLmjF.35.1250\t\tGO:0055114\tPMID:18669638\tISO\tGeneDB:Tb927.5.950\tP\tmonothiol glutaredoxin, putative\tLmjF35.1250\tmRNA\ttaxon:347515\t20110607\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1250\tLmjF.35.1250\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.950\tC\tmonothiol glutaredoxin, putative\tLmjF35.1250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1260\tLmjF.35.1260\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.960\tC\tATPase family associated with various cellular activities (AAA), putative\tLmjF35.1260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1270\tLmjF.35.1270\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.970\tC\thypothetical protein, conserved\tLmjF35.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1290\tLmjF.35.1290\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.990\tC\thypothetical protein, conserved\tLmjF35.1290\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1320\tLmjF.35.1320\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1010\tC\thypothetical protein, conserved\tLmjF35.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1350\tIsa2\t\tGO:0005739\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.1030\tC\tIron-sulfur assembly protein 2, putative\tLmjF35.1350\tmRNA\ttaxon:347515\t20140121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1350\tIsa2\t\tGO:0044572\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.1030\tP\tIron-sulfur assembly protein 2, putative\tLmjF35.1350\tmRNA\ttaxon:347515\t20140121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1350\tIsa2\t\tGO:2000377\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.1030\tP\tIron-sulfur assembly protein 2, putative\tLmjF35.1350\tmRNA\ttaxon:347515\t20140121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1380\tLmjF.35.1380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1060\tC\tmitochondrial processing peptidase, beta subunit, putative\tLmjF35.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1380\tLmjF.35.1380\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1060\tC\tmitochondrial processing peptidase, beta subunit, putative\tLmjF35.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1390\tLmjF.35.1390\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1070\tC\tZn-finger in Ran binding protein and others/OTU-like cysteine protease, putative\tLmjF35.1390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1390\tLmjF.35.1390\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1070\tC\tZn-finger in Ran binding protein and others/OTU-like cysteine protease, putative\tLmjF35.1390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1400\tRBP22\t\tGO:0003723\tPMID:18840477|GO_REF:0000024\tISO\tGeneDB:Tb927.5.1080\tF\tRNA binding protein, putative\tLmjF35.1400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1400\tRBP22\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1080\tC\tRNA binding protein, putative\tLmjF35.1400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1410\tLmjF.35.1410\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1090\tC\tthreonyl-tRNA synthetase, putative\tLmjF35.1410\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1420\tPEX5\t\tGO:0005515\tPMID:18178267\tIPI\tGeneDB:LmjF.29.0740\tF\tperoxisome targeting signal 1 receptor, putative\tLmjF35.1420\tmRNA\ttaxon:347515\t20141209\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1420\tPEX5\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1100\tC\tperoxisome targeting signal 1 receptor, putative\tLmjF35.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1460\tLmjF.35.1460\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.1130\tC\thypothetical protein, conserved\tLmjF35.1460\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1470\tLmjF.35.1470\t\tGO:0004103\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1140\tF\tcholine/ethanolamine kinase, putative\tLmjF35.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1470\tLmjF.35.1470\t\tGO:0004305\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1140\tF\tcholine/ethanolamine kinase, putative\tLmjF35.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1470\tLmjF.35.1470\t\tGO:0006646\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1140\tP\tcholine/ethanolamine kinase, putative\tLmjF35.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1470\tLmjF.35.1470\t\tGO:0006656\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1140\tP\tcholine/ethanolamine kinase, putative\tLmjF35.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1480\tLmjF.35.1480\t\tGO:0004053\tPMID:19393161\tIMP\t\tF\targinase\tLmjF35.1480\tmRNA\ttaxon:347515\t20090619\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1480\tLmjF.35.1480\t\tGO:0006525\tGO_REF:0000024\tISO\tGeneDB:LmxM.34.1480\tP\targinase\tLmjF35.1480\tmRNA\ttaxon:347515\t20180208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1480\tLmjF.35.1480\t\tGO:0006596\tPMID:19393161\tIMP\t\tP\targinase\tLmjF35.1480\tmRNA\ttaxon:347515\t20090619\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1480\tLmjF.35.1480\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:LmxM.34.1480\tC\targinase\tLmjF35.1480\tmRNA\ttaxon:347515\t20180208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1490\tLmjF.35.1490\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14100\tC\thypothetical protein, conserved\tLmjF35.1490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1510\tLmjF.35.1510\t\tGO:0000244\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14120\tP\tNLI interacting factor-like phosphatase/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF35.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1510\tLmjF.35.1510\t\tGO:0000398\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14120\tP\tNLI interacting factor-like phosphatase/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF35.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1510\tLmjF.35.1510\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tNLI interacting factor-like phosphatase/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF35.1510\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1510\tLmjF.35.1510\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14120\tC\tNLI interacting factor-like phosphatase/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF35.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1510\tLmjF.35.1510\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14120\tC\tNLI interacting factor-like phosphatase/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF35.1510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1510\tLmjF.35.1510\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14120\tP\tNLI interacting factor-like phosphatase/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF35.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1510\tLmjF.35.1510\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tNLI interacting factor-like phosphatase/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF35.1510\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1510\tLmjF.35.1510\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14120\tC\tNLI interacting factor-like phosphatase/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF35.1510\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1520\tLmjF.35.1520\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14130\tC\thypothetical protein, conserved\tLmjF35.1520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1520\tLmjF.35.1520\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14130\tC\thypothetical protein, conserved\tLmjF35.1520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1540\tRISP\t\tGO:0004362\tGO_REF:0000002\tISO\tGeneDB:Tb927.9.14160\tF\trieske iron-sulfur protein, mitochondrial precursor, putative\tLmjF35.1540\tmRNA\ttaxon:347515\t20130415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1540\tRISP\t\tGO:0005739\tPMID:15223320|GO_REF:0000024\tISO\tGeneDB:Tb927.9.14160\tC\trieske iron-sulfur protein, mitochondrial precursor, putative\tLmjF35.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1540\tRISP\t\tGO:0005743\tPMID:19834910\tISO\tGeneDB:Tb927.9.14160\tC\trieske iron-sulfur protein, mitochondrial precursor, putative\tLmjF35.1540\tmRNA\ttaxon:347515\t20130415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1540\tRISP\t\tGO:0008121\tGO_REF:0000002\tISS\t\tF\trieske iron-sulfur protein, mitochondrial precursor, putative\tLmjF35.1540\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1540\tRISP\t\tGO:0009060\tGO_REF:0000002\tISO\tGeneDB:Tb927.9.14160\tP\trieske iron-sulfur protein, mitochondrial precursor, putative\tLmjF35.1540\tmRNA\ttaxon:347515\t20130415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1540\tRISP\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14160\tC\trieske iron-sulfur protein, mitochondrial precursor, putative\tLmjF35.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1540\tRISP\t\tGO:0045275\tGO_REF:0000002\tISO\tGeneDB:Tb927.9.14160\tC\trieske iron-sulfur protein, mitochondrial precursor, putative\tLmjF35.1540\tmRNA\ttaxon:347515\t20130415\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1570\tLmjF.35.1570\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14200\tC\tmethyltransferase domain containing protein, putative\tLmjF35.1570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0004197\tPMID:17107676\tIDA\t\tF\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14220\tC\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0005759\tPMID:21166905\tIDA\t\tC\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20110510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0005829\tPMID:21166905\tIDA\t\tC\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20110510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0006915\tPMID:17107676\tIGI\t\tP\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0006979\tPMID:21166905\tIMP\t\tP\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20110510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0008631\tPMID:17107676\tIGI\t\tP\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0016540\tPMID:17107676\tIDA\t\tP\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14220\tC\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0051286\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14220\tC\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0070301\tPMID:17107676\tIGI\t\tP\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1580\tMCA5\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14220\tC\tmetacaspase\tLmjF35.1580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1590\tLmjF.35.1590\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14230\tC\thypothetical protein, conserved\tLmjF35.1590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1590\tLmjF.35.1590\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14230\tC\thypothetical protein, conserved\tLmjF35.1590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1600\tNUP82\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14240\tC\tNucleoporin NUP82\tLmjF35.1600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1600\tNUP82\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14240\tC\tNucleoporin NUP82\tLmjF35.1600\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1600\tNUP82\t\tGO:0031080\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14240\tC\tNucleoporin NUP82\tLmjF35.1600\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1610\tLmjF.35.1610\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14260\tC\thypothetical protein, conserved\tLmjF35.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1610\tLmjF.35.1610\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14260\tC\thypothetical protein, conserved\tLmjF35.1610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1650\tLmjF.35.1650\t\tGO:0000910\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14300\tP\thypothetical protein, conserved\tLmjF35.1650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1650\tLmjF.35.1650\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14300\tC\thypothetical protein, conserved\tLmjF35.1650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1660\tLmjF.35.1660\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14330\tC\tmismatch repair protein PMS1, putative\tLmjF35.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1670\tLmjF.35.1670\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14370\tC\t60S ribosomal protein L26, putative\tLmjF35.1670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1700\tCe1\t\tGO:0004484\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14410\tF\tRNA re-capping enzyme, cytoplasmic, putative\tLmjF35.1700\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1700\tCe1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14410\tC\tRNA re-capping enzyme, cytoplasmic, putative\tLmjF35.1700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1700\tCe1\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14410\tC\tRNA re-capping enzyme, cytoplasmic, putative\tLmjF35.1700\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1700\tCe1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14410\tC\tRNA re-capping enzyme, cytoplasmic, putative\tLmjF35.1700\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1700\tCe1\t\tGO:0019205\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14410\tF\tRNA re-capping enzyme, cytoplasmic, putative\tLmjF35.1700\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1700\tCe1\t\tGO:0036260\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14410\tP\tRNA re-capping enzyme, cytoplasmic, putative\tLmjF35.1700\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1720\tCYP14\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14420\tC\tcyclophilin 14, putative\tLmjF35.1720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1730\tCK2A1\t\tGO:0004674\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14430\tF\tcasein kinase II, putative\tLmjF35.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1730\tCK2A1\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14430\tF\tcasein kinase II, putative\tLmjF35.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1730\tCK2A1\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14430\tC\tcasein kinase II, putative\tLmjF35.1730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1730\tCK2A1\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14430\tC\tcasein kinase II, putative\tLmjF35.1730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1730\tCK2A1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14430\tC\tcasein kinase II, putative\tLmjF35.1730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1730\tCK2A1\t\tGO:0006468\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14430\tP\tcasein kinase II, putative\tLmjF35.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1730\tCK2A1\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14430\tC\tcasein kinase II, putative\tLmjF35.1730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1740\tLmjF.35.1740\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14470\tP\tubiquitin hydrolase, putative\tLmjF35.1740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1750\tLmjF.35.1750\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14480\tC\tdynein-associated roadblock protein-like protein\tLmjF35.1750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1750\tLmjF.35.1750\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14480\tC\tdynein-associated roadblock protein-like protein\tLmjF35.1750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1760\tLmjF.35.1760\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15000\tC\tproteasome complex subunit Rpn13 ubiquitin receptor, putative\tLmjF35.1760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1760\tLmjF.35.1760\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15000\tC\tproteasome complex subunit Rpn13 ubiquitin receptor, putative\tLmjF35.1760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1770\tLmjF.35.1770\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15010\tC\thypothetical protein, conserved\tLmjF35.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1770\tLmjF.35.1770\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15010\tC\thypothetical protein, conserved\tLmjF35.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1790\tLmjF.35.1790\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15030\tC\tDNA polymerase epsilon subunit B, putative\tLmjF35.1790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1800\tLmjF.35.1800\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15040\tP\tDTW domain containing protein, putative\tLmjF35.1800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1810\tDRC4\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:LmxM.34.1810\tC\ttrypanin-like protein\tLmjF35.1810|GAS8\tmRNA\ttaxon:347515\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1810\tDRC4\t\tGO:1904526\tGO_REF:0000012\tISA\tUniProtKB:Q60779\tP\ttrypanin-like protein\tLmjF35.1810|GAS8\tmRNA\ttaxon:347515\t20160719\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1820\tLmjF.35.1820\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15060\tC\tEukaryotic rRNA processing protein EBP2, putative\tLmjF35.1820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1840\tLmjF.35.1840\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15080\tC\thypothetical protein, conserved\tLmjF35.1840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1840\tLmjF.35.1840\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15080\tC\thypothetical protein, conserved\tLmjF35.1840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1850\tLmjF.35.1850\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15090\tC\tCOP-coated vesicle membrane protein gp25L precursor, 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when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1880\tLmjF.35.1880\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15110\tC\t60S ribosomal protein L5, putative\tLmjF35.1880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1890\tLmjF.35.1890\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15110\tC\t60S ribosomal protein L5, putative\tLmjF35.1890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1890\tLmjF.35.1890\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15110\tC\t60S ribosomal protein L5, putative\tLmjF35.1890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1900\tLmjF.35.1900\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15110\tC\t60S ribosomal protein L5, putative\tLmjF35.1900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1900\tLmjF.35.1900\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15110\tC\t60S ribosomal protein L5, putative\tLmjF35.1900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1920\tLmjF.35.1920\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15210\tC\t60S ribosomal protein L36, putative\tLmjF35.1920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1920\tLmjF.35.1920\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15210\tC\t60S ribosomal protein L36, putative\tLmjF35.1920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1950\tLmjF.35.1950\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15240\tC\tATP11 protein, putative\tLmjF35.1950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1970\tLmjF.35.1970\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15260\tC\tubx domain containing protein, putative\tLmjF35.1970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1980\tLmjF.35.1980\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15270\tC\thypothetical protein, conserved\tLmjF35.1980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1980\tLmjF.35.1980\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15270\tC\thypothetical protein, conserved\tLmjF35.1980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1990\tLmjF.35.1990\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15330\tC\tU3 small nucleolar RNA-associated protein 6, putative\tLmjF35.1990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1990\tLmjF.35.1990\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15330\tC\tU3 small nucleolar RNA-associated protein 6, putative\tLmjF35.1990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2000\tLmjF.35.2000\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15350\tC\thypothetical protein, conserved\tLmjF35.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2000\tLmjF.35.2000\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15350\tC\thypothetical protein, conserved\tLmjF35.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2000\tLmjF.35.2000\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15350\tC\thypothetical protein, conserved\tLmjF35.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2010\tLmjF.35.2010\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15360\tF\t40S ribosomal protein S6, putative\tLmjF35.2010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2010\tLmjF.35.2010\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15360\tC\t40S ribosomal protein S6, putative\tLmjF35.2010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2010\tLmjF.35.2010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15360\tC\t40S ribosomal protein S6, putative\tLmjF35.2010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2020\tLmjF.35.2020\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15380\tC\thypothetical protein, conserved\tLmjF35.2020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2020\tLmjF.35.2020\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15380\tC\thypothetical protein, conserved\tLmjF35.2020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2020\tLmjF.35.2020\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15380\tC\thypothetical protein, conserved\tLmjF35.2020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2040\tLmjF.35.2040\t\tGO:1990900\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15400\tC\tankyrin repeat protein, putative\tLmjF35.2040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2080\tLmjF.35.2080\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15460\tP\tcalcium motive p-type ATPase, putative\tLmjF35.2080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2090\tLmjF.35.2090\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.15470\tC\tkinesin, putative\tLmjF35.2090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2120\tLmjF.35.2120\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14080\tC\tR-SNARE protein, putative\tLmjF35.2120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2120\tLmjF.35.2120\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.14080\tC\tR-SNARE protein, putative\tLmjF35.2120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2140\tLmjF.35.2140\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14050\tC\thypothetical protein, conserved\tLmjF35.2140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2150\tLmjF.35.2150\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14070\tC\tshort chain dehydrogenase, putative\tLmjF35.2150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2150\tLmjF.35.2150\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14070\tC\tshort chain dehydrogenase, putative\tLmjF35.2150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2150\tLmjF.35.2150\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14070\tC\tshort chain dehydrogenase, putative\tLmjF35.2150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2160\tAAH\t\tGO:0000034\tPMID:291031\tIDA\t\tF\tadenine aminohydrolase\tLmjF35.2160\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2160\tAAH\t\tGO:0020015\tPMID:16603734\tIMP\t\tC\tadenine aminohydrolase\tLmjF35.2160\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2160\tAAH\t\tGO:0043101\tPMID:16603734\tIMP\t\tP\tadenine aminohydrolase\tLmjF35.2160\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2200\tLmjF.35.2200\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13990\tF\tRNA-binding protein, putative\tLmjF35.2200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2200\tLmjF.35.2200\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.13990\tC\tRNA-binding protein, putative\tLmjF35.2200\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2200\tLmjF.35.2200\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13990\tP\tRNA-binding protein, putative\tLmjF35.2200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2210\tKMPII-1\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.13820\tC\tkinetoplastid membrane protein-11\tLmjF35.2210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2210\tKMPII-1\t\tGO:0032053\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13920\tP\tkinetoplastid membrane protein-11\tLmjF35.2210\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2210\tKMPII-1\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13920\tC\tkinetoplastid membrane protein-11\tLmjF35.2210\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2210\tKMPII-1\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.13820\tC\tkinetoplastid membrane protein-11\tLmjF35.2210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2220\tKMPII-2\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.13820\tC\tkinetoplastid membrane protein-11\tLmjF35.2220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2220\tKMPII-2\t\tGO:0032053\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13920\tP\tkinetoplastid membrane protein-11\tLmjF35.2220\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2220\tKMPII-2\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13920\tC\tkinetoplastid membrane protein-11\tLmjF35.2220\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2220\tKMPII-2\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.13820\tC\tkinetoplastid membrane protein-11\tLmjF35.2220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2230\tLmjF.35.2230\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13780\tC\thypothetical protein, conserved\tLmjF35.2230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2270\tLmjF.35.2270\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13610\tF\tATP-dependent RNA helicase-like protein\tLmjF35.2270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2270\tLmjF.35.2270\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.13610\tC\tATP-dependent RNA helicase-like protein\tLmjF35.2270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2300\tLmjF.35.2300\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13540\tC\thypothetical protein, conserved\tLmjF35.2300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2300\tLmjF.35.2300\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13540\tC\thypothetical protein, conserved\tLmjF35.2300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2310\tLmjF.35.2310\t\tGO:0044145\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13530\tP\thypothetical protein, conserved\tLmjF35.2310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2310\tLmjF.35.2310\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13530\tP\thypothetical protein, 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2340\tLmjF.35.2340\t\tGO:0005634\tGO_REF:0000002\tISO\tGeneDB:Tb927.9.13510\tC\tpoly(A)-specific ribonuclease PARN, putative\tLmjF35.2340\tmRNA\ttaxon:347515\t20120321\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2340\tLmjF.35.2340\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.13510\tC\tpoly(A)-specific ribonuclease PARN, putative\tLmjF35.2340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2340\tLmjF.35.2340\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.13510\tC\tpoly(A)-specific ribonuclease PARN, putative\tLmjF35.2340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2350\tLmjF.35.2350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.13490\tC\taminopeptidase P, putative\tLmjF35.2350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2370\tLmjF.35.2370\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13470\tC\thypothetical protein, conserved\tLmjF35.2370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2400\tFLAM5\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13440\tC\tFlagellar Member 5\tLmjF35.2400\tmRNA\ttaxon:347515\t20180705\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2400\tFLAM5\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.13440\tC\tFlagellar Member 5\tLmjF35.2400\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2400\tFLAM5\t\tGO:0031514\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13440\tC\tFlagellar Member 5\tLmjF35.2400\tmRNA\ttaxon:347515\t20150813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2420\tATG24\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.13380\tC\tAutophagy-related protein 24\tLmjF35.2420|SNX4\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2420\tATG24\t\tGO:0006898\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13380\tP\tAutophagy-related protein 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2420\tATG24\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13380\tP\tAutophagy-related protein 24\tLmjF35.2420|SNX4\tmRNA\ttaxon:347515\t20150625\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2470\tLmjF.35.2470\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13350\tC\thypothetical protein, conserved\tLmjF35.2470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2480\tLmjF.35.2480\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13340\tC\tNop53 (60S ribosomal 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2510\tLmjF.35.2510\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13310\tC\tYos1-like, putative\tLmjF35.2510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2510\tLmjF.35.2510\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13310\tC\tYos1-like, putative\tLmjF35.2510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2550\tDRBD10\t\tGO:0003723\tGO_REF:0000011\tISM\tInterPro:IPR000504\tF\tDouble RNA binding domain protein 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2550\tDRBD10\t\tGO:0006396\tGO_REF:0000011\tISM\tPfam:PF00076\tP\tDouble RNA binding domain protein 9\tLmjF35.2550\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2560\tLmjF.35.2560\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13250\tC\tcytochrome P450 reductase, putative\tLmjF35.2560\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2560\tLmjF.35.2560\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13250\tC\tcytochrome P450 reductase, 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2650\tPOMP8\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13120\tC\tPresent in the outer mitochondrial membrane proteome 8\tLmjF35.2650\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2690\tLmjF.35.2690\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13060\tC\tbtb/poz domain containing protein, putative\tLmjF35.2690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2760\tLmjF.35.2760\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13010\tC\thypothetical protein, conserved\tLmjF35.2760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2760\tLmjF.35.2760\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13010\tC\thypothetical protein, conserved\tLmjF35.2760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2780\tLmjF.35.2780\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12960\tC\ttransporter-like protein\tLmjF35.2780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2950\tLmjF.35.2950\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12770\tF\tpentatricopeptide repeat domain containing protein, putative\tLmjF35.2950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2950\tLmjF.35.2950\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12770\tC\tpentatricopeptide repeat domain containing protein, putative\tLmjF35.2950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": 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"GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3020\tLmjF.35.3020\t\tGO:0008970\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.9.12700\tF\tphospholipase A1, putative\tLmjF35.3020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3020\tLmjF.35.3020\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12700\tC\tphospholipase A1, putative\tLmjF35.3020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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methyltransferase, putative\tLmjF35.3030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3060\tLmjF.35.3060\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.12650\tC\tubiquitin-activating enzyme E1, putative\tLmjF35.3060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3060\tLmjF.35.3060\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.12650\tC\tubiquitin-activating enzyme E1, putative\tLmjF35.3060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3080\tLmjF.35.3080\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.12610|GeneDB:Tb927.9.12570\tC\tglycerol kinase, glycosomal, putative\tLmjF35.3080\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3090\tJ71\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12530\tC\tDnaJ domain containing protein, putative\tLmjF35.3090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3140\tLmjF.35.3140\t\tGO:0000825\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12470\tF\tinositol polyphosphate kinase, putative\tLmjF35.3140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3140\tLmjF.35.3140\t\tGO:0000827\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12470\tF\tinositol polyphosphate kinase, putative\tLmjF35.3140\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF35.3150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3150\tLmjF.35.3150\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12450\tC\tclass I transcription factor A, subunit 2, putative\tLmjF35.3150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3150\tLmjF.35.3150\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12450\tC\tclass I transcription factor A, subunit 2, putative\tLmjF35.3150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3160\tLmjF.35.3160\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12430\tP\triboflavin kinase/fmn adenylyltransferase-like protein\tLmjF35.3160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3200\tLmjF.35.3200\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12360\tF\tRNA-binding protein, putative\tLmjF35.3200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3230\tLmjF.35.3230\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.12320\tC\tcystathione gamma lyase, putative\tLmjF35.3230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3230\tLmjF.35.3230\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12320\tP\tcystathione gamma lyase, putative\tLmjF35.3230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"TriTrypDB\tLmjF.35.3260\tLmjF.35.3260\t\tGO:0020015\tPMID:15907560\tIDA\t\tC\tPeroxin 19\tLmjF35.3260\tmRNA\ttaxon:347515\t20090911\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3280\tLmjF.35.3280\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.12240\tC\t60S ribosomal subunit protein L31, putative\tLmjF35.3280\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3280\tLmjF.35.3280\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.12240\tC\t60S ribosomal subunit protein L31, putative\tLmjF35.3280\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3290\tLmjF.35.3290\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.12240\tC\t60S ribosomal subunit protein L31, putative\tLmjF35.3290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3290\tLmjF.35.3290\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.12240\tC\t60S ribosomal subunit protein L31, putative\tLmjF35.3290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3320\tLmjF.35.3320\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12150\tC\ttransport protein particle (TRAPP) subunit, putative\tLmjF35.3320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3320\tLmjF.35.3320\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12150\tC\ttransport protein particle (TRAPP) subunit, putative\tLmjF35.3320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3320\tLmjF.35.3320\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12150\tC\ttransport protein particle (TRAPP) subunit, putative\tLmjF35.3320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3330\tLmjF.35.3330\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12140\tC\tmitochondrial carrier protein, putative\tLmjF35.3330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3330\tLmjF.35.3330\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12140\tC\tmitochondrial carrier protein, putative\tLmjF35.3330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3360\tLmjF.35.3360\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.12090\tC\tPutative death-receptor fusion protein (DUF2428), putative\tLmjF35.3360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3360\tLmjF.35.3360\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.12090\tC\tPutative death-receptor fusion protein (DUF2428), putative\tLmjF35.3360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3390\tLmjF.35.3390\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12030\tC\thypothetical protein, conserved\tLmjF35.3390\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3400\tLmjF.35.3400\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12000\tC\tLEM3 (ligand-effect modulator 3) family / CDC50 family, putative\tLmjF35.3400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3450\tLmjF.35.3450\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11930\tC\tDNA-repair protein, putative\tLmjF35.3450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3450\tLmjF.35.3450\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11930\tC\tDNA-repair protein, putative\tLmjF35.3450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3460\tLmjF.35.3460\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11910\tC\tperoxidase, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3540\tPNO1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11840\tC\tpre-rRNA-processing protein PNO1, putative\tLmjF35.3540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3540\tPNO1\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11840\tC\tpre-rRNA-processing protein PNO1, putative\tLmjF35.3540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3540\tPNO1\t\tGO:0005730\tGO_REF:0000012\tISA\tUniProtKB:PNO1_HUMAN\tC\tpre-rRNA-processing protein 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3610\tCYP7\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11740\tC\tcyclophilin 7, putative\tLmjF35.3610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3610\tCYP7\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11740\tC\tcyclophilin 7, putative\tLmjF35.3610\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3620\tLmjF.35.3620\t\tGO:0005506\tPMID:16882667\tISO\tGeneDB:Tb927.9.11720\tF\tiron-sulfur cluster assembly protein, 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qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3690\tLmjF.35.3690\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11640\tC\tPeroxisomal biogenesis factor 11 (PEX11), putative\tLmjF35.3690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3700\tLmjF.35.3700\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11580\tC\tGim5A protein, putative\tLmjF35.3700\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3740\tLmjF.35.3740\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11510\tC\thypothetical protein, conserved\tLmjF35.3740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3750\tLmjF.35.3750\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11500\tC\tCullin family, putative\tLmjF35.3750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3860\tLmjF.35.3860\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11270\tC\tT-complex protein 1, eta subunit, putative\tLmjF35.3860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3870\tLmjF.35.3870\t\tGO:0004550\tGO_REF:0000002\tISS\t\tF\tnucleoside diphosphate kinase, putative\tLmjF35.3870\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3870\tLmjF.35.3870\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\tnucleoside 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RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3870\tLmjF.35.3870\t\tGO:0006183\tGO_REF:0000002\tISS\t\tP\tnucleoside diphosphate kinase, putative\tLmjF35.3870\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3870\tLmjF.35.3870\t\tGO:0006228\tGO_REF:0000002\tISS\t\tP\tnucleoside diphosphate kinase, putative\tLmjF35.3870\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3870\tLmjF.35.3870\t\tGO:0006241\tGO_REF:0000002\tISS\t\tP\tnucleoside diphosphate kinase, putative\tLmjF35.3870\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3880\tLmjF.35.3880\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11250\tC\tWD domain, G-beta repeat/Sof1-like domain containing protein, putative\tLmjF35.3880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3890\tLmjF.35.3890\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11230\tC\tcalmodulin-like protein\tLmjF35.3890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3890\tLmjF.35.3890\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11230\tC\tcalmodulin-like protein\tLmjF35.3890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3900\tLmjF.35.3900\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11220\tC\thypothetical protein, conserved\tLmjF35.3900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3900\tLmjF.35.3900\t\tGO:0030150\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11220\tP\thypothetical protein, conserved\tLmjF35.3900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3900\tLmjF.35.3900\t\tGO:0031966\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11220\tC\thypothetical protein, conserved\tLmjF35.3900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3920\tLmjF.35.3920\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11150\tC\thypothetical protein, conserved\tLmjF35.3920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3925\tLmjF.35.3925\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11140\tC\thypothetical protein, conserved\tLmjF35.3925\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3930\tLmjF.35.3930\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11130\tC\tunc-50 related protein homolog\tLmjF35.3930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3940\tLmjF.35.3940\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11120\tC\tChromosome passenger complex (CPC) protein INCENP N terminal, putative\tLmjF35.3940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3940\tLmjF.35.3940\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11120\tC\tChromosome passenger complex (CPC) protein INCENP N terminal, putative\tLmjF35.3940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3950\tLmjF.35.3950\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11110\tC\tU5 snRNA-associated splicing factor\tLmjF35.3950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3950\tLmjF.35.3950\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11110\tC\tU5 snRNA-associated splicing factor\tLmjF35.3950\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3960\tPKAC2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11030\tC\tcAMP-dependent protein kinase catalytic subunit 2\tLmjF35.3960\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3960\tPKAC2\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11030\tC\tcAMP-dependent protein kinase catalytic subunit 2\tLmjF35.3960\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3960\tPKAC2\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11030\tC\tcAMP-dependent protein kinase catalytic subunit 2\tLmjF35.3960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3960\tPKAC2\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11030\tC\tcAMP-dependent protein kinase catalytic subunit 2\tLmjF35.3960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3970\tLmjF.35.3970\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11070\tC\tpredicted zinc finger protein\tLmjF35.3970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3970\tLmjF.35.3970\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11070\tC\tpredicted zinc finger protein\tLmjF35.3970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3980\t4E-IP\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11050\tF\t4E-interacting protein, putative\tLmjF35.3980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3980\t4E-IP\t\tGO:0005515\tPMID:21764780\tIPI\tGeneDB:LmjF.27.1620\tF\t4E-interacting protein, putative\tLmjF35.3980\tmRNA\ttaxon:347515\t20150311\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3980\t4E-IP\t\tGO:0005737\tPMID:21764780|PMID:17041189|GO_REF:0000024\tISO\tGeneDB:Tb927.9.11050|GO:0005515\tC\t4E-interacting protein, putative\tLmjF35.3980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3980\t4E-IP\t\tGO:0006417\tPMID:21764780\tIDA\t\tP\t4E-interacting protein, putative\tLmjF35.3980\tmRNA\ttaxon:347515\t20120604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3980\t4E-IP\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11050\tP\t4E-interacting protein, putative\tLmjF35.3980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3980\t4E-IP\t\tGO:0045182\tPMID:21764780\tIDA\t\tF\t4E-interacting protein, putative\tLmjF35.3980\tmRNA\ttaxon:347515\t20120604\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3990\tLmjF.35.3990\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11040\tC\tmitochondrial carrier protein, putative\tLmjF35.3990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3990\tLmjF.35.3990\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.11040\tC\tmitochondrial carrier protein, putative\tLmjF35.3990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4010\tPKAC1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11030\tC\tcAMP-dependent protein kinase catalytic subunit 1\tLmjF35.4010\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4010\tPKAC1\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11030\tC\tcAMP-dependent protein kinase catalytic subunit 1\tLmjF35.4010\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4010\tPKAC1\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11030\tC\tcAMP-dependent protein kinase catalytic subunit 1\tLmjF35.4010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4010\tPKAC1\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.11030\tC\tcAMP-dependent protein kinase catalytic subunit 1\tLmjF35.4010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4020\tLmjF.35.4020\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10970\tC\tBem46-like serine peptidase\tLmjF35.4020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4030\tLmjF.35.4030\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10960\tC\tATP-dependent RNA helicase, putative\tLmjF35.4030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4045\tLmjF.35.4045\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10930\tC\thypothetical protein, conserved\tLmjF35.4045\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4045\tLmjF.35.4045\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10930\tC\thypothetical protein, conserved\tLmjF35.4045\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4050\tkkt3\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10920\tC\tProtein kinase PK6, putative\tLmjF35.4050|PK6\tmRNA\ttaxon:347515\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4050\tkkt3\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10920\tC\tProtein kinase PK6, putative\tLmjF35.4050|PK6\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4050\tkkt3\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10920\tP\tProtein kinase PK6, putative\tLmjF35.4050|PK6\tmRNA\ttaxon:347515\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4050\tkkt3\t\tGO:0008283\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10920\tP\tProtein kinase PK6, putative\tLmjF35.4050|PK6\tmRNA\ttaxon:347515\t20140218\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4060\tLmjF.35.4060\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.10890\tC\tRegulatory subunit of type II PKA R-subunit, putative\tLmjF35.4060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4080\tLmjF.35.4080\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10870\tC\thypothetical protein, 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4190\tLmjF.35.4190\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10660\tC\thypothetical protein, conserved\tLmjF35.4190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4190\tLmjF.35.4190\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10660\tC\thypothetical protein, conserved\tLmjF35.4190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4250\tLmjF.35.4250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.10580\tC\t3-demethylubiquinone-9 3-methyltransferase, putative\tLmjF35.4250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4270\tPOMP6\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.506147.80\tC\tPresent in the outer mitochondrial membrane proteome 6\tLmjF35.4270\tmRNA\ttaxon:347515\t20150318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4270\tPOMP6\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10560\tC\tPresent in the outer mitochondrial membrane proteome 6\tLmjF35.4270\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4280\tSAS6\t\tGO:0007099\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10550\tP\tSpindle assembly abnormal protein 6 homolog\tLmjF35.4280|SASS6\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4280\tSAS6\t\tGO:0032054\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10550\tP\tSpindle assembly abnormal protein 6 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4300\tLmjF.35.4300\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10520\tC\thypothetical protein, conserved\tLmjF35.4300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4310\tLmjF.35.4310\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10510\tC\thypothetical protein, conserved\tLmjF35.4310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4310\tLmjF.35.4310\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10510\tC\thypothetical protein, conserved\tLmjF35.4310\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4320\tLmjF.35.4320\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10500\tC\tHAD hydrolase, TIGR01456 family/HAD hydrolase, family IIA, putative\tLmjF35.4320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4320\tLmjF.35.4320\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10500\tC\tHAD hydrolase, TIGR01456 family/HAD hydrolase, family IIA, putative\tLmjF35.4320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4330\tLmjF.35.4330\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.10490\tC\tpre-RNA processing PIH1/Nop17, putative\tLmjF35.4330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4330\tLmjF.35.4330\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10490\tP\tpre-RNA processing PIH1/Nop17, putative\tLmjF35.4330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4340\tLmjF.35.4340\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10470\tC\thypothetical protein, conserved\tLmjF35.4340\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4350\tLmjF.35.4350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.10450\tC\tPGAP1-like protein, putative\tLmjF35.4350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4360\tLmjF.35.4360\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10440\tC\tDNA polymerase epsilon catalytic subunit, putative\tLmjF35.4360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4360\tLmjF.35.4360\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.10440\tC\tDNA polymerase epsilon catalytic subunit, putative\tLmjF35.4360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4370\tLmjF.35.4370\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10430\tC\tZinc-binding domain containing protein, putative\tLmjF35.4370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4380\tLmjF.35.4380\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10400\tF\thypothetical protein, conserved\tLmjF35.4380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4380\tLmjF.35.4380\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10400\tC\thypothetical protein, conserved\tLmjF35.4380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4380\tLmjF.35.4380\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10400\tC\thypothetical protein, conserved\tLmjF35.4380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4390\tLmjF.35.4390\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.10370\tC\tTAX-1\tLmjF35.4390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4390\tLmjF.35.4390\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.10370\tC\tTAX-1\tLmjF35.4390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4390\tLmjF.35.4390\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.10370\tC\tTAX-1\tLmjF35.4390\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4400\tLmjF.35.4400\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.10350\tC\tSnf7, putative\tLmjF35.4400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4400\tLmjF.35.4400\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.10350\tC\tSnf7, putative\tLmjF35.4400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4410\tAAT11\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10340\tC\tamino acid permease, putative\tLmjF35.4410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4410\tAAT11\t\tGO:0005764\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10340\tC\tamino acid permease, putative\tLmjF35.4410\tmRNA\ttaxon:347515\t20150227\tGeneDB\t\t", "type": "Invalid Qualifier", "message": 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4440\tLmjF.35.4440\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10300\tC\thypothetical protein, conserved\tLmjF35.4440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4450\tLmjF.35.4450\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tpredicted zinc finger protein\tLmjF35.4450\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4460\tLmjF.35.4460\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10250\tC\tsm-f snRNP core 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4470\tP23\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.10230\tC\tCo-chaperone protein P23\tLmjF35.4470|ACDP23A\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4480\tLmjF.35.4480\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10200\tC\thypothetical protein, conserved\tLmjF35.4480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4480\tLmjF.35.4480\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10200\tC\thypothetical protein, 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"level": "WARNING", "line": "TriTrypDB\tLmjF.35.4580\tLmjF.35.4580\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10050\tC\t60Kd inner membrane protein, putative\tLmjF35.4580\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4590\tLmjF.35.4590\t\tGO:0004609\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.9.10080|GeneDB:Tb09.211.1610\tF\tphosphatidylserine decarboxylase, putative\tLmjF35.4590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4590\tLmjF.35.4590\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10080\tC\tphosphatidylserine 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4610\tLmjF.35.4610\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10070\tC\thypothetical protein, conserved\tLmjF35.4610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4630\tJ34\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10010\tF\tchaperone protein DnaJ, putative\tLmjF35.4630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4690\tLmjF.35.4690\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9940\tC\tPACRGB\tLmjF35.4690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4690\tLmjF.35.4690\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9940\tP\tPACRGB\tLmjF35.4690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4700\tKIN13-6\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9870\tC\tKinesin-13 6, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4760\tLmjF.35.4760\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9810\tC\thypothetical protein, conserved\tLmjF35.4760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4770\tCYP40\t\tGO:0016018\tPMID:20614016\tIDA\t\tF\tcyclophilin 40\tLmjF35.4770\tmRNA\ttaxon:347515\t20100713\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4800\tLmjF.35.4800\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9740\tC\tAMP deaminase, 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4880\tLmjF.35.4880\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9630\tC\tTPR repeat, putative\tLmjF35.4880\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4890\tDMC1\t\tGO:0007131\tGO_REF:0000002\tISM\tInterPro:IPR011940\tP\tmeiotic recombination protein DMC1, putative\tLmjF35.4890\tmRNA\ttaxon:347515\t20130917\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4890\tDMC1\t\tGO:0042405\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9620\tC\tmeiotic recombination protein DMC1, putative\tLmjF35.4890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4910\tLmjF.35.4910\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9600\tC\tDNA replication licensing factor MCM9, putative\tLmjF35.4910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4910\tLmjF.35.4910\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9600\tC\tDNA replication licensing factor MCM9, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4940\tLmjF.35.4940\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9550\tC\thypothetical protein, conserved\tLmjF35.4940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4940\tLmjF.35.4940\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9550\tC\thypothetical protein, conserved\tLmjF35.4940\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4940\tLmjF.35.4940\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9550\tP\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4950\tLmjF.35.4950\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9450\tP\tzinc finger protein family member, putative\tLmjF35.4950\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4960\tLmjF.35.4960\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9430\tC\thypothetical protein, conserved\tLmjF35.4960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4970\tLmjF.35.4970\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9420\tC\thypothetical protein, conserved\tLmjF35.4970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4990\tSLS3\t\tGO:0005768\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9390\tC\tsphingomyelin/ceramide phosphorylethanolamine synthase, bifunctional\tLmjF35.4990|ESP19\tmRNA\ttaxon:347515\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4990\tSLS3\t\tGO:0005794\tPMID:16861742|PMID:19497128\tEXP\t\tC\tsphingomyelin/ceramide phosphorylethanolamine synthase, bifunctional\tLmjF35.4990|ESP19\tmRNA\ttaxon:347515\t20090728\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4990\tSLS3\t\tGO:0016020\tGO_REF:0000002\tISS\t\tC\tsphingomyelin/ceramide phosphorylethanolamine synthase, bifunctional\tLmjF35.4990|ESP19\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4990\tSLS3\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9390\tC\tsphingomyelin/ceramide phosphorylethanolamine synthase, bifunctional\tLmjF35.4990|ESP19\tmRNA\ttaxon:347515\t20150722\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4990\tSLS3\t\tGO:0033188\tPMID:20457606\tISO\tGeneDB:Tb09.211.1020\tF\tsphingomyelin/ceramide phosphorylethanolamine synthase, bifunctional\tLmjF35.4990|ESP19\tmRNA\ttaxon:347515\t20110907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4990\tSLS3\t\tGO:0046335\tPMID:20457606\tISO\tGeneDB:Tb09.211.1020\tP\tsphingomyelin/ceramide phosphorylethanolamine synthase, bifunctional\tLmjF35.4990|ESP19\tmRNA\ttaxon:347515\t20110907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5010\tMPK13\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9320\tC\tmitogen-activated protein kinase, putative\tLmjF35.5010|MOK\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5040\tPABP1\t\tGO:0005634\tPMID:10666465\tIDA\t\tC\tpolyadenylate-binding protein 1\tLmjF35.5040\tmRNA\ttaxon:347515\t20101103\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5040\tPABP1\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9290\tC\tpolyadenylate-binding protein 1\tLmjF35.5040\tmRNA\ttaxon:347515\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5040\tPABP1\t\tGO:0005737\tPMID:20675580\tIDA\t\tC\tpolyadenylate-binding protein 1\tLmjF35.5040\tmRNA\ttaxon:347515\t20101011\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5040\tPABP1\t\tGO:0006378\tPMID:10666465\tIDA\t\tP\tpolyadenylate-binding protein 1\tLmjF35.5040\tmRNA\ttaxon:347515\t20101103\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5040\tPABP1\t\tGO:0008143\tPMID:20675580\tIDA\t\tF\tpolyadenylate-binding protein 1\tLmjF35.5040\tmRNA\ttaxon:347515\t20101011\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5040\tPABP1\t\tGO:0008190\tPMID:21764780\tIPI\tGeneDB:LmjF.30.0450\tF\tpolyadenylate-binding protein 1\tLmjF35.5040\tmRNA\ttaxon:347515\t20120723\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5040\tPABP1\t\tGO:0010494\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9290\tC\tpolyadenylate-binding protein 1\tLmjF35.5040\tmRNA\ttaxon:347515\t20160606\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5040\tPABP1\t\tGO:0031370\tPMID:20675580\tIDA\t\tF\tpolyadenylate-binding protein 1\tLmjF35.5040\tmRNA\ttaxon:347515\t20101011\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5080\tLmjF.35.5080\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9230\tC\thypothetical protein, conserved\tLmjF35.5080\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5080\tLmjF.35.5080\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9230\tC\thypothetical protein, conserved\tLmjF35.5080\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5090\tLmjF.35.5090\t\tGO:0004526\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9220\tF\thypothetical protein, conserved\tLmjF35.5090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5090\tLmjF.35.5090\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9220\tC\thypothetical protein, conserved\tLmjF35.5090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5090\tLmjF.35.5090\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9220\tC\thypothetical protein, conserved\tLmjF35.5090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5090\tLmjF.35.5090\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9220\tC\thypothetical protein, conserved\tLmjF35.5090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5100\tLmjF.35.5100\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9210\tC\t60S ribosomal protein L37\tLmjF35.5100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5150\tBT1\t\tGO:0005886\tPMID:10589984\tISO\tGeneDB:LinJ.35.5120\tC\tbiopterin transporter, putative\tORFG|LmjF35.5150\tmRNA\ttaxon:347515\t20100805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5150\tBT1\t\tGO:0015224\tPMID:10589984\tISO\tGeneDB:LinJ.35.5120\tF\tbiopterin transporter, putative\tORFG|LmjF35.5150\tmRNA\ttaxon:347515\t20100805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5150\tBT1\t\tGO:0015877\tPMID:10589984\tISO\tGeneDB:LinJ.35.5120\tP\tbiopterin transporter, putative\tORFG|LmjF35.5150\tmRNA\ttaxon:347515\t20100805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5200\tLmjF.35.5200\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical protein, conserved\tLmjF35.5200\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5210\tLmjF.35.5210\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9150\tC\tGTP-binding protein, putative\tLmjF35.5210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5250\tALG11\t\tGO:0000026\tPMID:20382188\tISO\tGeneDB:Tb09.211.0860\tF\talpha-1,2-mannosyltransferase, putative\tLmjF35.5250\tmRNA\ttaxon:347515\t20100824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5250\tALG11\t\tGO:0006490\tPMID:20382188\tISO\tGeneDB:Tb09.211.0860\tP\talpha-1,2-mannosyltransferase, putative\tLmjF35.5250\tmRNA\ttaxon:347515\t20100824\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5250\tALG11\t\tGO:0000026\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.9.9200|GeneDB:Tb09.211.0860\tF\talpha-1,2-mannosyltransferase, putative\tLmjF35.5250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5250\tALG11\t\tGO:0006490\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.9.9200|GeneDB:Tb09.211.0860\tP\talpha-1,2-mannosyltransferase, putative\tLmjF35.5250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5260\tLmjF.35.5260\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9100\tC\thypothetical protein, conserved\tLmjF35.5260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5260\tLmjF.35.5260\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9100\tC\thypothetical protein, conserved\tLmjF35.5260\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5270\tLmjF.35.5270\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9090\tC\tWD domain, G-beta repeat, putative\tLmjF35.5270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5280\tPOMP5\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9080\tC\tPresent in the outer mitochondrial membrane proteome 5\tLmjF35.5280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5280\tPOMP5\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9080\tC\tPresent in the outer mitochondrial membrane proteome 5\tLmjF35.5280\tmRNA\ttaxon:347515\t20150416\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5290\tLmjF.35.5290\t\tGO:0003723\tGO_REF:0000002\tISO\tGeneDB:Tb927.9.9060\tF\tLsm12 protein, putative\tLmjF35.5290\tmRNA\ttaxon:347515\t20120720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5290\tLmjF.35.5290\t\tGO:0005737\tGO_REF:0000002\tISO\tGeneDB:Tb927.9.9060\tC\tLsm12 protein, putative\tLmjF35.5290\tmRNA\ttaxon:347515\t20120720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5290\tLmjF.35.5290\t\tGO:0010494\tGO_REF:0000002\tISO\tGeneDB:Tb927.9.9060\tC\tLsm12 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5290\tLmjF.35.5290\t\tGO:0034063\tGO_REF:0000002\tISO\tGeneDB:Tb927.9.9060\tP\tLsm12 protein, putative\tLmjF35.5290\tmRNA\ttaxon:347515\t20120720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5310\tLmjF.35.5310\t\tGO:0005525\tGO_REF:0000002\tISS\t\tF\tribosome-interacting GTPase 2, putative\tLmjF35.5310\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5310\tLmjF.35.5310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9020\tC\tribosome-interacting GTPase 2, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5310\tLmjF.35.5310\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.9020\tC\tribosome-interacting GTPase 2, putative\tLmjF35.5310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5320\tLmjF.35.5320\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9010\tC\tSAC3/GANP/Nin1/mts3/eIF-3 p25 family, putative\tLmjF35.5320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5330\tidi1\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9000\tC\tisopentenyl-diphosphate delta-isomerase (type II), putative\tLmjF35.5330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5340\tLmjF.35.5340\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8990\tC\tDynein heavy chain and region D6 of dynein motor/Ankyrin repeats (3 copies), putative\tLmjF35.5340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5340\tLmjF.35.5340\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8990\tC\tDynein heavy chain and region D6 of dynein motor/Ankyrin repeats (3 copies), putative\tLmjF35.5340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5340\tLmjF.35.5340\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.9.8990\tC\tDynein heavy chain and region D6 of dynein motor/Ankyrin repeats (3 copies), putative\tLmjF35.5340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0050\tPUF1\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4430\tF\tPUF1, putative\tLmjF36.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0050\tPUF1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4430\tC\tPUF1, putative\tLmjF36.0050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0050\tPUF1\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4430\tP\tPUF1, putative\tLmjF36.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0050\tPUF1\t\tGO:0016049\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4430\tP\tPUF1, putative\tLmjF36.0050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0065\tLmjF.36.0065\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4440\tC\tSAP domain containing protein, putative\tLmjF36.0065\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0065\tLmjF.36.0065\t\tGO:0005635\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4440\tC\tSAP domain containing protein, putative\tLmjF36.0065\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid 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Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0120\tCMT1\t\tGO:0009452\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4500\tP\tcap guanine-N7 methyltransferase\tLmjF36.0120\tmRNA\ttaxon:347515\t20160720\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0130\tLmjF.36.0130\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4510\tC\tPUB domain containing protein, putative\tLmjF36.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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}, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0190\tEF2-2\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4560\tC\telongation factor 2\tLmjF36.0190\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0200\tLmjF.36.0200\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4590\tC\tmitochondrial inner membrane signal peptidase, putative\tLmjF36.0200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0200\tLmjF.36.0200\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4590\tC\tmitochondrial inner membrane signal peptidase, 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0220\tDPMS\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4610\tC\tdolicholphosphate-mannose synthase\tLmjF36.0220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0220\tDPMS\t\tGO:0006506\tPMID:10329621|PMID:11689705\tIDA\t\tP\tdolicholphosphate-mannose synthase\tLmjF36.0220\tmRNA\ttaxon:347515\t20090930\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0220\tDPMS\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4610\tC\tdolicholphosphate-mannose synthase\tLmjF36.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0230\tLmjF.36.0230\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4620\tC\tpeptidyl-prolyl cis-trans isomerase, putative\tLmjF36.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0230\tLmjF.36.0230\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4620\tC\tpeptidyl-prolyl cis-trans isomerase, putative\tLmjF36.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0230\tLmjF.36.0230\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4620\tC\tpeptidyl-prolyl cis-trans isomerase, putative\tLmjF36.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0240\tLmjF.36.0240\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4630\tC\tAfadin- and alpha -actinin-Binding, putative\tLmjF36.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0250\tEIF3L\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4640\tF\teukaryotic translation initiation factor 3 subunit l\tLmjF36.0250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0250\tEIF3L\t\tGO:0003743\tGO_REF:0000012\tISA\tUniProtKB:EIF3L_HUMAN\tF\teukaryotic translation initiation factor 3 subunit l\tLmjF36.0250\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0250\tEIF3L\t\tGO:0005737\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\teukaryotic translation initiation factor 3 subunit l\tLmjF36.0250\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0250\tEIF3L\t\tGO:0005852\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\teukaryotic translation initiation factor 3 subunit l\tLmjF36.0250\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0250\tEIF3L\t\tGO:0006413\tGO_REF:0000012\tISA\tUniProtKB:EIF3L_HUMAN\tP\teukaryotic translation initiation factor 3 subunit l\tLmjF36.0250\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0280\tLmjF.36.0280\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4660\tC\thypothetical protein, conserved\tLmjF36.0280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0300\tNudix5\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4680\tC\tMutt-Nudix-related hydrolase 5, putative\tLmjF36.0300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0300\tNudix5\tNOT\tGO:0031087\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4680\tP\tMutt-Nudix-related hydrolase 5, putative\tLmjF36.0300\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0300\tNudix5\tNOT\tGO:0050072\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4680\tF\tMutt-Nudix-related hydrolase 5, putative\tLmjF36.0300\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0310\tLmjF.36.0310\t\tGO:0004582\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4700\tF\tdolicholphosphate-mannose synthase, putative\tLmjF36.0310\tmRNA\ttaxon:347515\t20100914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0310\tLmjF.36.0310\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4700\tC\tdolicholphosphate-mannose synthase, putative\tLmjF36.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0310\tLmjF.36.0310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4700\tC\tdolicholphosphate-mannose synthase, putative\tLmjF36.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0310\tLmjF.36.0310\t\tGO:0006488\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4700\tP\tdolicholphosphate-mannose synthase, putative\tLmjF36.0310\tmRNA\ttaxon:347515\t20100914\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0310\tLmjF.36.0310\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4700\tC\tdolicholphosphate-mannose synthase, putative\tLmjF36.0310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0320\tLmjF.36.0320\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4710\tC\t20S proteasome subunit\tLmjF36.0320\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0330\tRNHii\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4730\tC\tribonuclease HII, putative\tLmjF36.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0360\tLmjF.36.0360\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4760\tC\tIntegral membrane protein DUF106, putative\tLmjF36.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0380\tLmjF.36.0380\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4790\tC\thypothetical protein, conserved\tLmjF36.0380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0450\tLmjF.36.0450\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4860\tC\thypothetical protein, conserved\tLmjF36.0450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0470\tLmjF.36.0470\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4870\tC\tdihydrouridine synthase domain protein-like protein\tLmjF36.0470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0480\tLmjF.36.0480\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4880\tC\thypothetical protein, conserved\tLmjF36.0480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0490\tLmjF.36.0490\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4890\tC\tzinc-finger of a C2HC-type, putative\tLmjF36.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0490\tLmjF.36.0490\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4890\tC\tzinc-finger of a C2HC-type, putative\tLmjF36.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0490\tLmjF.36.0490\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4890\tC\tzinc-finger of a C2HC-type, putative\tLmjF36.0490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0500\tJ52\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.4900\tC\tTPR-repeat-containing chaperone protein DNAJ, putative\tLmjF36.0500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0500\tJ52\t\tGO:0006457\tGO_REF:0000011\tISM\tInterPro:IPR001623\tP\tTPR-repeat-containing chaperone protein DNAJ, putative\tLmjF36.0500\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0510\tLmjF.36.0510\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4910\tC\tmitochondrial carrier protein, putative\tLmjF36.0510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0510\tLmjF.36.0510\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4910\tC\tmitochondrial carrier protein, putative\tLmjF36.0510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0530\tLmjF.36.0530\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4930\tC\tprotein phosphatase 2C-like protein\tLmjF36.0530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0530\tLmjF.36.0530\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4930\tC\tprotein phosphatase 2C-like protein\tLmjF36.0530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0530\tLmjF.36.0530\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4930\tC\tprotein phosphatase 2C-like protein\tLmjF36.0530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0535\tLmjF.36.0535\t\tGO:0000380\tPMID:17105994|GO_REF:0000024\tISO\tGeneDB:Tb927.10.4950\tP\tU2 small nuclear ribonucleoprotein 16.5K, putative\tLmjF36.0535\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0535\tLmjF.36.0535\t\tGO:0003723\tPMID:17105994|GO_REF:0000024\tISO\tGeneDB:Tb927.10.4950\tF\tU2 small nuclear ribonucleoprotein 16.5K, putative\tLmjF36.0535\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0535\tLmjF.36.0535\t\tGO:0005634\tPMID:17105994|GO_REF:0000024\tISO\tGeneDB:Tb927.10.4950\tC\tU2 small nuclear ribonucleoprotein 16.5K, putative\tLmjF36.0535\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0535\tLmjF.36.0535\t\tGO:0005686\tPMID:17105994|GO_REF:0000024\tISO\tGeneDB:Tb927.10.4950\tC\tU2 small nuclear ribonucleoprotein 16.5K, putative\tLmjF36.0535\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0550\tCRK3\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4990\tC\tcdc2-related kinase 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0590\teif4e5\t\tGO:0000342\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.5020\tF\tEukaryotic translation initiation factor 4E type 5, putative\tLmjF36.0590\tmRNA\ttaxon:347515\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0590\teif4e5\t\tGO:0005737\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.5020\tC\tEukaryotic translation initiation factor 4E type 5, putative\tLmjF36.0590\tmRNA\ttaxon:347515\t20140710\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0600\tLmjF.36.0600\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5030\tC\tubiquitin/ribosomal protein S27a, putative\tLmjF36.0600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0620\tLmjF.36.0620\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5050\tC\thypothetical protein, conserved\tLmjF36.0620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0650\tTTA2\t\tGO:0003923\tPMID:12958211|GO_REF:0000024\tISO\tGeneDB:Tb927.10.5080\tF\tGPI transamidase component Tta2, putative\tLmjF36.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0650\tTTA2\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5080\tC\tGPI transamidase component Tta2, putative\tLmjF36.0650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0650\tTTA2\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5080\tC\tGPI transamidase component Tta2, putative\tLmjF36.0650\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0650\tTTA2\t\tGO:0042765\tPMID:12958211\tISO\tGeneDB:Tb927.10.5080\tC\tGPI transamidase component Tta2, putative\tLmjF36.0650\tmRNA\ttaxon:347515\t20100112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0660\tESP18\t\tGO:0005768\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5090\tC\tEnriched in surface-labeled proteome protein 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0700\tLmjF.36.0700\t\tGO:0004519\tPMID:18065716|GO_REF:0000024\tISO\tGeneDB:Tb927.10.5120\tF\tMP18 RNA editing complex protein, putative\tLmjF36.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0700\tLmjF.36.0700\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5120\tC\tMP18 RNA editing complex protein, putative\tLmjF36.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0700\tLmjF.36.0700\t\tGO:0009451\tPMID:11564867\tTAS\t\tP\tMP18 RNA editing complex protein, putative\tLmjF36.0700\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0700\tLmjF.36.0700\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5120\tC\tMP18 RNA editing complex protein, putative\tLmjF36.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0700\tLmjF.36.0700\t\tGO:0031019\tPMID:11564867\tIDA\t\tC\tMP18 RNA editing complex protein, putative\tLmjF36.0700\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0700\tLmjF.36.0700\t\tGO:0031019\tPMID:20018860|GO_REF:0000024\tISO\tGeneDB:Tb927.10.5120\tC\tMP18 RNA editing complex protein, putative\tLmjF36.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0710\tLmjF.36.0710\t\tGO:0005739\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tC\tProtein C21orf2 homolog, putative\tLmjF36.0710\tmRNA\ttaxon:347515\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0710\tLmjF.36.0710\t\tGO:0007010\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tP\tProtein C21orf2 homolog, putative\tLmjF36.0710\tmRNA\ttaxon:347515\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0710\tLmjF.36.0710\t\tGO:0008360\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tP\tProtein C21orf2 homolog, putative\tLmjF36.0710\tmRNA\ttaxon:347515\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0710\tLmjF.36.0710\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5130\tP\tProtein C21orf2 homolog, putative\tLmjF36.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0710\tLmjF.36.0710\t\tGO:0060271\tGO_REF:0000002\tISA\tUniProtKB:CU002_MOUSE\tP\tProtein C21orf2 homolog, putative\tLmjF36.0710\tmRNA\ttaxon:347515\t20130910\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0720\tMPK2\t\tGO:0000281\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5140\tP\tmitogen-activated protein kinase 2\tLmjF36.0720\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0720\tMPK2\t\tGO:0004672\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tmitogen-activated protein kinase 2\tLmjF36.0720\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0720\tMPK2\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR000719\tF\tmitogen-activated protein kinase 2\tLmjF36.0720\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0720\tMPK2\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5140\tC\tmitogen-activated protein kinase 2\tLmjF36.0720\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0720\tMPK2\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5140\tC\tmitogen-activated protein kinase 2\tLmjF36.0720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0720\tMPK2\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5140\tC\tmitogen-activated protein kinase 2\tLmjF36.0720\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0720\tMPK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\tmitogen-activated protein kinase 2\tLmjF36.0720\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0720\tMPK2\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5140\tC\tmitogen-activated protein kinase 2\tLmjF36.0720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0720\tMPK2\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5140\tC\tmitogen-activated protein kinase 2\tLmjF36.0720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0730\tZC3H31\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger protein family member, putative\tLmjF36.0730\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0730\tZC3H31\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5150\tP\tzinc finger protein family member, putative\tLmjF36.0730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0760\tJ67\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5180\tC\tTPR-repeat-containing chaperone protein DNAJ, putative\tLmjF36.0760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0770\tLmjF.36.0770\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5200\tC\thypothetical protein, conserved\tLmjF36.0770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0800\tLmjF.36.0800\t\tGO:0003700\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5210\tF\tTFIIH basal transcription factor subunit, putative\tLmjF36.0800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0800\tLmjF.36.0800\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5210\tC\tTFIIH basal transcription factor subunit, putative\tLmjF36.0800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0800\tLmjF.36.0800\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5210\tC\tTFIIH basal transcription factor subunit, putative\tLmjF36.0800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0820\tLmjF.36.0820\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5230\tC\tADP-ribosylation factor-like protein\tLmjF36.0820\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0830\tLmjF.36.0830\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5240\tC\tcAMP binding protein, putative\tLmjF36.0830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0830\tLmjF.36.0830\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP binding protein, putative\tLmjF36.0830\tmRNA\ttaxon:347515\t20150413\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0840\tLmjF.36.0840\t\tGO:0003723\tPMID:20444260\tISM\t\tF\tzinc finger protein family member, putative\tLmjF36.0840\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0840\tLmjF.36.0840\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5250\tF\tzinc finger protein family member, putative\tLmjF36.0840\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0840\tLmjF.36.0840\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5250\tC\tzinc finger protein family member, putative\tLmjF36.0840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0860\tMKK5\t\tGO:0004672\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tF\tmitogen-activated protein kinase kinase 5\tLmjF36.0860\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0860\tMKK5\t\tGO:0004708\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tF\tmitogen-activated protein kinase kinase 5\tLmjF36.0860\tmRNA\ttaxon:347515\t20160115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0860\tMKK5\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5270\tC\tmitogen-activated protein kinase kinase 5\tLmjF36.0860\tmRNA\ttaxon:347515\t20120918\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0860\tMKK5\t\tGO:0006468\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tP\tmitogen-activated protein kinase kinase 5\tLmjF36.0860\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0860\tMKK5\t\tGO:0043406\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tP\tmitogen-activated protein kinase kinase 5\tLmjF36.0860\tmRNA\ttaxon:347515\t20160115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0860\tMKK5\t\tGO:0046777\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tP\tmitogen-activated protein kinase kinase 5\tLmjF36.0860\tmRNA\ttaxon:347515\t20160115\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0860\tMKK5\t\tGO:0051019\tGO_REF:0000024\tISO\tGeneDB:LmxM.36.0860\tF\tmitogen-activated protein kinase kinase 5\tLmjF36.0860\tmRNA\ttaxon:347515\t20110506\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0870\tLmjF.36.0870\t\tGO:0000375\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tP\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\tLmjF36.0870\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0870\tLmjF.36.0870\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tF\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\tLmjF36.0870\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0870\tLmjF.36.0870\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5280\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\tLmjF36.0870\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0870\tLmjF.36.0870\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5280\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\tLmjF36.0870\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0870\tLmjF.36.0870\t\tGO:0005681\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tC\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\tLmjF36.0870\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0870\tLmjF.36.0870\t\tGO:0008380\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tP\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\tLmjF36.0870\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0880\tNU1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5290\tC\tNifU-like domain containing protein, putative\tLmjF36.0880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0880\tNU1\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5290\tC\tNifU-like domain containing protein, putative\tLmjF36.0880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0890\tLmjF.36.0890\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5300\tC\teukaryotic translation initiation factor 6 (eIF-6), putative\tLmjF36.0890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0890\tLmjF.36.0890\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5300\tC\teukaryotic translation initiation factor 6 (eIF-6), putative\tLmjF36.0890\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0900\tLmjF.36.0900\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5310\tC\tSNF1-related protein kinases, putative\tLmjF36.0900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0920\tLmjF.36.0920\t\tGO:0004129\tPMID:17954557|GO_REF:0000024\tISO\tGeneDB:Tb927.10.5320\tF\tRNA editing complex protein MP67\tLmjF36.0920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0920\tLmjF.36.0920\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5320\tC\tRNA editing complex protein MP67\tLmjF36.0920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1010\tLmjF.36.1010\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5390\tC\thypothetical protein, conserved\tLmjF36.1010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1020\tLmjF.36.1020\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5400\tC\thypothetical protein, conserved\tLmjF36.1020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1060\tNLP\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5450\tC\tISWI complex protein\tLmjF36.1060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1060\tNLP\t\tGO:0006338\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5450\tP\tISWI complex protein\tLmjF36.1060\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1060\tNLP\t\tGO:0031010\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5450\tC\tISWI complex protein\tLmjF36.1060\tmRNA\ttaxon:347515\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1060\tNLP\t\tGO:0031555\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5450\tP\tISWI complex protein\tLmjF36.1060\tmRNA\ttaxon:347515\t20101117\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1060\tNLP\t\tGO:0031935\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5450\tP\tISWI complex protein\tLmjF36.1060\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1060\tNLP\t\tGO:0044212\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5450\tF\tISWI complex protein\tLmjF36.1060\tmRNA\ttaxon:347515\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1060\tNLP\t\tGO:0045892\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5450\tP\tISWI complex protein\tLmjF36.1060\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1060\tNLP\t\tGO:0045893\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5450\tP\tISWI complex protein\tLmjF36.1060\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1070\tLmjF.36.1070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5480\tC\tribosomal protein L24, putative\tLmjF36.1070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1100\tLmjF.36.1100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5480\tC\tribosomal protein L24, putative\tLmjF36.1100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1160\tLmjF.36.1160\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5520\tC\tAmmeMemoRadiSam system protein B, putative\tLmjF36.1160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1160\tLmjF.36.1160\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5520\tC\tAmmeMemoRadiSam system protein B, putative\tLmjF36.1160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1160\tLmjF.36.1160\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5520\tC\tAmmeMemoRadiSam system protein B, putative\tLmjF36.1160\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1170\tLmjF.36.1170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5530\tC\thypothetical protein, conserved\tLmjF36.1170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1190\tLmjF.36.1190\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5550\tC\thypothetical protein, 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1200\tGPI10\t\tGO:0006506\tPMID:10954751\tISO\tGeneDB:Tb927.10.5560\tP\tGPI alpha-mannosyltransferase III\tLmjF36.1200\tmRNA\ttaxon:347515\t20091104\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1210\tLmjF.36.1210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5570\tC\thypothetical protein, conserved\tLmjF36.1210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1230\tLmjF.36.1230\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5590\tC\tprotein phosphatase 2C, putative\tLmjF36.1230\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1240\tLmjF.36.1240\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5600\tC\thypothetical protein, conserved\tLmjF36.1240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1250\tLmjF.36.1250\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5610\tC\t40S ribosomal protein S9, putative\tLmjF36.1250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1250\tLmjF.36.1250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5610\tC\t40S ribosomal protein S9, putative\tLmjF36.1250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1250\tLmjF.36.1250\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5610\tC\t40S ribosomal protein S9, putative\tLmjF36.1250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1250\tLmjF.36.1250\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5610\tC\t40S ribosomal protein S9, putative\tLmjF36.1250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1260\tALD\t\tGO:0020015\tPMID:10551371|GO_REF:0000024\tISO\tGeneDB:Tb927.10.5620|GeneDB:LmxM.36.1260\tC\tfructose-1,6-bisphosphate aldolase\tLmjF36.1260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1300\tLmjF.36.1300\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5640\tC\thypothetical protein, conserved\tLmjF36.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1300\tLmjF.36.1300\t\tGO:0045292\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5640\tP\thypothetical protein, conserved\tLmjF36.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1300\tLmjF.36.1300\t\tGO:0071024\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5640\tC\thypothetical protein, conserved\tLmjF36.1300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1310\tLmjF.36.1310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5650\tC\thypothetical protein, conserved\tLmjF36.1310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1330\tJ5\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5660\tC\theat shock protein, putative\tLmjF36.1330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1340\tLmjF.36.1340\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5670\tC\tN-acetyltransferase subunit Nat1, putative\tLmjF36.1340\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1350\tLmjF.36.1350\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6550\tC\tPoly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region/Zinc-finger (CX5CX6HX5H) motif containing protein, putative\tLmjF36.1350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1350\tLmjF.36.1350\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6550\tC\tPoly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region/Zinc-finger (CX5CX6HX5H) motif containing protein, putative\tLmjF36.1350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1350\tLmjF.36.1350\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6550\tC\tPoly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region/Zinc-finger (CX5CX6HX5H) motif containing protein, putative\tLmjF36.1350\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1360\tADKD\t\tGO:0020015\tGO_REF:0000002\tISM\t\tC\tadenylate kinase, putative\tLmjF36.1360\tmRNA\ttaxon:347515\t20090602\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1360\tADKD\t\tGO:0020015\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.5760\tC\tadenylate kinase, putative\tLmjF36.1360\tmRNA\ttaxon:347515\t20170616\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1370\tVCP\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5770\tC\tTransitional endoplasmic reticulum ATPase, putative\tLmjF36.1370|CDC48\tmRNA\ttaxon:347515\t20150414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1370\tVCP\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5770\tC\tTransitional endoplasmic reticulum ATPase, putative\tLmjF36.1370|CDC48\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1370\tVCP\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5770\tC\tTransitional endoplasmic reticulum ATPase, putative\tLmjF36.1370|CDC48\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1370\tVCP\t\tGO:0016020\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5770\tC\tTransitional endoplasmic reticulum ATPase, putative\tLmjF36.1370|CDC48\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1370\tVCP\t\tGO:0016887\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5770\tF\tTransitional endoplasmic reticulum ATPase, putative\tLmjF36.1370|CDC48\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1370\tVCP\t\tGO:0030970\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5770\tP\tTransitional endoplasmic reticulum ATPase, putative\tLmjF36.1370|CDC48\tmRNA\ttaxon:347515\t20150414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1370\tVCP\t\tGO:0042802\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5770\tF\tTransitional endoplasmic reticulum ATPase, putative\tLmjF36.1370|CDC48\tmRNA\ttaxon:347515\t20150414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1370\tVCP\t\tGO:0051228\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5770\tP\tTransitional endoplasmic reticulum ATPase, putative\tLmjF36.1370|CDC48\tmRNA\ttaxon:347515\t20150414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1370\tVCP\t\tGO:0098554\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5770\tC\tTransitional endoplasmic reticulum ATPase, putative\tLmjF36.1370|CDC48\tmRNA\ttaxon:347515\t20150414\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1380\tLmjF.36.1380\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5790\tC\thypothetical protein, conserved\tLmjF36.1380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1400\tLmjF.36.1400\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5810\tC\tThe ARF-like 2 binding protein BART, putative\tLmjF36.1400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1400\tLmjF.36.1400\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5810\tP\tThe ARF-like 2 binding protein BART, putative\tLmjF36.1400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1400\tLmjF.36.1400\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5810\tC\tThe ARF-like 2 binding protein BART, putative\tLmjF36.1400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1420\tLmjF.36.1420\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5830\tP\tZn-finger in Ran binding protein and others, putative\tLmjF36.1420\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1430\tLmjF.36.1430\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5840\tC\ttranslation elongation factor 1-beta, putative\tLmjF36.1430\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1470\tLmjF.36.1470\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5890\tC\tkelch motif containing protein, putative\tLmjF36.1470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1470\tLmjF.36.1470\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5890\tC\tkelch motif containing protein, putative\tLmjF36.1470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1480\tLmjF.36.1480\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5900\tC\thypothetical protein, conserved\tLmjF36.1480\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1490\tLmjF.36.1490\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5910\tC\thypothetical protein, conserved\tLmjF36.1490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1500\tLmjF.36.1500\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5920\tC\thypothetical protein, conserved\tLmjF36.1500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1540\tLmjF.36.1540\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5960\tC\tengulfment and cell motility domain 2, putative\tLmjF36.1540\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1560\tLmjF.36.1560\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5980\tC\tLeucine Rich Repeat, putative\tLmjF36.1560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1560\tLmjF.36.1560\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5980\tC\tLeucine Rich Repeat, putative\tLmjF36.1560\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1570\tLmjF.36.1570\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5990\tP\thypothetical protein, conserved\tLmjF36.1570\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1570\tLmjF.36.1570\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.5990\tC\thypothetical protein, conserved\tLmjF36.1570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1590\tLmjF.36.1590\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6010\tC\tSTAG domain containing protein, putative\tLmjF36.1590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1595\tLmjF.36.1595\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6020\tC\thypothetical protein, conserved\tLmjF36.1595\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1600\tPSA1\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6030\tC\tproteasome subunit alpha type-1, putative\tLmjF36.1600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1600\tPSA1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6030\tC\tproteasome subunit alpha type-1, putative\tLmjF36.1600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1630\tLmjF.36.1630\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6050\tF\tclathrin heavy chain, putative\tLmjF36.1630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1630\tLmjF.36.1630\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6050\tC\tclathrin heavy chain, putative\tLmjF36.1630\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1640\tUMSBP\t\tGO:0000278\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6060\tP\tuniversal minicircle sequence binding protein, putative\tLmjF36.1640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1640\tUMSBP\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6060\tF\tuniversal minicircle sequence binding protein, putative\tLmjF36.1640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1640\tUMSBP\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6060\tC\tuniversal minicircle sequence binding protein, putative\tLmjF36.1640\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1640\tUMSBP\t\tGO:0007067\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6060\tP\tuniversal minicircle sequence binding protein, putative\tLmjF36.1640\tmRNA\ttaxon:347515\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1640\tUMSBP\t\tGO:0033955\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6060\tP\tuniversal minicircle sequence binding protein, putative\tLmjF36.1640\tmRNA\ttaxon:347515\t20141124\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1660\tLmjF.36.1660\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6090\tC\ttRNA pseudouridine synthase A, putative\tLmjF36.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1660\tLmjF.36.1660\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6090\tC\ttRNA pseudouridine synthase A, putative\tLmjF36.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1660\tLmjF.36.1660\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6090\tC\ttRNA pseudouridine synthase A, putative\tLmjF36.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1690\tLmjF.36.1690\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6120\tC\tPeptidase M76 family, putative\tLmjF36.1690\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1710\tLmjF.36.1710\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6140\tC\tphosphatidylinositolN-acetylglucosaminyltransfe ra sesubunit c, putative\tLmjF36.1710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1710\tLmjF.36.1710\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6140\tC\tphosphatidylinositolN-acetylglucosaminyltransfe ra sesubunit c, putative\tLmjF36.1710\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1710\tLmjF.36.1710\t\tGO:0006506\tGO_REF:0000002\tISS\tInterPro:IPR009450\tP\tphosphatidylinositolN-acetylglucosaminyltransfe ra sesubunit c, putative\tLmjF36.1710\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1710\tLmjF.36.1710\t\tGO:0017176\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.10.6140|InterPro:IPR009450\tF\tphosphatidylinositolN-acetylglucosaminyltransfe ra sesubunit c, putative\tLmjF36.1710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1720\tLmjF.36.1720\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6150\tC\tneurobeachin/beige protein, putative\tLmjF36.1720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1720\tLmjF.36.1720\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6150\tC\tneurobeachin/beige protein, putative\tLmjF36.1720\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1730\tLmjF.36.1730\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6160\tC\thypothetical protein, conserved\tLmjF36.1730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1750\tLmjF.36.1750\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6180\tC\thypothetical protein, conserved\tLmjF36.1750\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1780\tLmjF.36.1780\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6210\tC\tTPR repeat, putative\tLmjF36.1780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1780\tLmjF.36.1780\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6210\tC\tTPR repeat, putative\tLmjF36.1780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1790\tXRND\t\tGO:0004527\tGO_REF:0000011\tISM\tInterPro:IPR004859\tF\t5'-3' exoribonuclease D, putative\tLmjF36.1790\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1790\tXRND\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6220\tC\t5'-3' exoribonuclease D, putative\tLmjF36.1790\tmRNA\ttaxon:347515\t20120423\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1790\tXRND\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6220\tC\t5'-3' exoribonuclease D, putative\tLmjF36.1790\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1790\tXRND\t\tGO:0006396\tGO_REF:0000012\tISA\tUniProtKB:O35651\tP\t5'-3' exoribonuclease D, putative\tLmjF36.1790\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1810\tLmjF.36.1810\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6230\tC\tMORN repeat, putative\tLmjF36.1810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1810\tLmjF.36.1810\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6230\tC\tMORN repeat, putative\tLmjF36.1810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1860\tLmjF.36.1860\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6300\tC\tRibosomal protein S5, C-terminal domain containing protein, putative\tLmjF36.1860\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1860\tLmjF.36.1860\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6300\tC\tRibosomal protein S5, C-terminal domain containing protein, putative\tLmjF36.1860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1880\tLmjF.36.1880\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6320\tC\tCBF/Mak21 family, putative\tLmjF36.1880\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1900\tKKT1\t\tGO:0000776\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.6330\tC\tkinetoplastid kinetochore protein 1\tLmjF36.1900\tmRNA\ttaxon:347515\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1900\tKKT1\t\tGO:0000776\tPMID:28935715\tIDA\t\tC\tkinetoplastid kinetochore protein 1\tLmjF36.1900\tmRNA\ttaxon:347515\t20171121\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1900\tKKT1\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6330\tC\tkinetoplastid kinetochore protein 1\tLmjF36.1900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1900\tKKT1\t\tGO:0007059\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.6330\tP\tkinetoplastid kinetochore protein 1\tLmjF36.1900\tmRNA\ttaxon:347515\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1910\tLmjF.36.1910\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6350\tC\tT-lymphocyte triggering factor, putative\tLmjF36.1910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1910\tLmjF.36.1910\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6350\tP\tT-lymphocyte triggering factor, putative\tLmjF36.1910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1920\tLmjF.36.1920\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6360\tC\thypothetical 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1940\tNT2\t\tGO:0005337\tGO_REF:0000024\tISO\tGeneDB:LdBPK_362040.1\tF\tinosine-guanosine transporter\tLmjF36.1940\tmRNA\ttaxon:347515\t20100819\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1940\tNT2\t\tGO:0006190\tGO_REF:0000024\tISO\tGeneDB:LdBPK_362040.1\tP\tinosine-guanosine transporter\tLmjF36.1940\tmRNA\ttaxon:347515\t20100819\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1940\tNT2\t\tGO:0031226\tGO_REF:0000024\tISO\tGeneDB:LdBPK_362040.1\tC\tinosine-guanosine 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1960\tPMM\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6440\tC\tphosphomannomutase, putative\tLmjF36.1960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1960\tPMM\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6440\tC\tphosphomannomutase, putative\tLmjF36.1960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1960\tPMM\t\tGO:0019307\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6440\tP\tphosphomannomutase, putative\tLmjF36.1960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1960\tPMM\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6440\tC\tphosphomannomutase, putative\tLmjF36.1960\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1960\tPMM\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6440\tC\tphosphomannomutase, putative\tLmjF36.1960\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1970\tLmjF.36.1970\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6450\tP\t2OG-Fe(II) oxygenase superfamily, putative\tLmjF36.1970\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2010\tLmjF.36.2010\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6480\tC\thypothetical protein, conserved\tLmjF36.2010\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2020\tLmjF.36.2020\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6510\tC\tchaperonin HSP60, mitochondrial precursor\tLmjF36.2020\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2020\tLmjF.36.2020\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6400\tC\tchaperonin HSP60, mitochondrial precursor\tLmjF36.2020\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2020\tLmjF.36.2020\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6400\tC\tchaperonin HSP60, mitochondrial precursor\tLmjF36.2020\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2030\tLmjF.36.2030\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6510\tC\tchaperonin HSP60, mitochondrial precursor\tLmjF36.2030\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2030\tLmjF.36.2030\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6400\tC\tchaperonin HSP60, mitochondrial precursor\tLmjF36.2030\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2030\tLmjF.36.2030\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6400\tC\tchaperonin HSP60, mitochondrial precursor\tLmjF36.2030\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2035\tLmjF.36.2035\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6520\tC\thypothetical protein, conserved\tLmjF36.2035\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2040\tALG3\t\tGO:0004584\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6530\tF\tdolichyl-P-Man:GDP-Man5GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF36.2040\tmRNA\ttaxon:347515\t20100907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2040\tALG3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6530\tC\tdolichyl-P-Man:GDP-Man5GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF36.2040\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2040\tALG3\t\tGO:0005789\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6530\tC\tdolichyl-P-Man:GDP-Man5GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF36.2040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2040\tALG3\t\tGO:0006490\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6530\tP\tdolichyl-P-Man:GDP-Man5GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF36.2040\tmRNA\ttaxon:347515\t20100907\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2050\tLmjF.36.2050\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6540\tC\tkinetoplastid-specific phospho-protein phosphatase, putative\tLmjF36.2050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2050\tLmjF.36.2050\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6540\tC\tkinetoplastid-specific phospho-protein phosphatase, putative\tLmjF36.2050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2050\tLmjF.36.2050\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6540\tC\tkinetoplastid-specific phospho-protein phosphatase, putative\tLmjF36.2050\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2060\tLmjF.36.2060\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6560\tC\tProtein of unknown function DUF72, putative\tLmjF36.2060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2070\tLmjF.36.2070\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6570\tC\tTPR repeat/Tetratricopeptide repeat, putative\tLmjF36.2070\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2090\tLmjF.36.2090\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6590\tC\thypothetical protein, conserved\tLmjF36.2090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2100\tLmjF.36.2100\t\tGO:0005634\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6600\tC\thypothetical protein, conserved\tLmjF36.2100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2100\tLmjF.36.2100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6600\tC\thypothetical protein, conserved\tLmjF36.2100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2130\tDBP2A\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6630\tC\tATP-dependent DEAD/H RNA helicase HEL64, putative\tLmjF36.2130|HEL64\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2130\tDBP2A\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6630\tC\tATP-dependent DEAD/H RNA helicase HEL64, putative\tLmjF36.2130|HEL64\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2130\tDBP2A\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6630\tC\tATP-dependent DEAD/H RNA helicase HEL64, putative\tLmjF36.2130|HEL64\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2150\tLmjF.36.2150\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6640\tP\ttransmembrane emp24 domain-containing protein\tLmjF36.2150\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2170\tLmjF.36.2170\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6680\tC\tNOL1/NOP2/sun family, putative\tLmjF36.2170\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2180\tLmjF.36.2180\t\tGO:0004725\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6690\tF\tprotein-tyrosine phosphatase 1-like protein\tLmjF36.2180\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2180\tLmjF.36.2180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6690\tC\tprotein-tyrosine phosphatase 1-like protein\tLmjF36.2180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2180\tLmjF.36.2180\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6690\tC\tprotein-tyrosine phosphatase 1-like protein\tLmjF36.2180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2180\tLmjF.36.2180\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6690\tC\tprotein-tyrosine phosphatase 1-like protein\tLmjF36.2180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2210\tLmjF.36.2210\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6720\tC\tPlasma-membrane choline transporter, putative\tLmjF36.2210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2210\tLmjF.36.2210\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6730\tC\tPlasma-membrane choline transporter, putative\tLmjF36.2210\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2240\tGCP3L\tNOT\tGO:0000930\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6790\tC\tGamma-tubulin complex component 3-like protein\tLmjF36.2240\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2250\tLmjF.36.2250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6800\tC\tdevelopmentally regulated GTP-binding protein 1, putative\tLmjF36.2250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2260\tLmjF.36.2260\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6810\tC\tguanylate kinase-like protein\tLmjF36.2260\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0020018\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6830\tC\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0030665\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6830\tC\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0032050\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6830\tF\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0033572\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6830\tP\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0034452\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0034464\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tC\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0034464\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6830\tC\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6830\tC\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0043014\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20140611\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0043130\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6830\tF\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20160715\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2360\tTAT\t\tGO:0009074\tPMID:19443056\tIDA\t\tP\ttyrosine aminotransferase\tLmjF36.2360\tmRNA\ttaxon:347515\t20090630\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2360\tTAT\t\tGO:0009087\tPMID:19443056\tIDA\t\tP\ttyrosine aminotransferase\tLmjF36.2360\tmRNA\ttaxon:347515\t20090630\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2360\tTAT\t\tGO:0080099\tPMID:19443056\tIDA\t\tF\ttyrosine 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2370\tLmjF.36.2370\t\tGO:0046527\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6900\tF\tbase J-associated glucosyltransferase\tLmjF36.2370\tmRNA\ttaxon:347515\t20180208\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2380\tLmjF.36.2380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6950\tC\tsterol 24-c-methyltransferase, putative\tLmjF36.2380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2440\tLmjF.36.2440\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6990\tC\thypothetical protein, conserved\tLmjF36.2440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2440\tLmjF.36.2440\t\tGO:0020018\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6990\tC\thypothetical protein, conserved\tLmjF36.2440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2440\tLmjF.36.2440\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.6990\tC\thypothetical 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2470\tAP\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7020\tC\tacid phosphatase, putative\tLmjF36.2470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2470\tAP\t\tGO:0020022\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7020\tC\tacid phosphatase, putative\tLmjF36.2470\tmRNA\ttaxon:347515\t20150306\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2480\tLmjF.36.2480\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7030\tC\thypothetical protein, 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2500\tLmjF.36.2500\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7050\tC\tchromatin assembly factor 1 subunit b-like protein\tLmjF36.2500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2510\tNUP96\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7060\tC\tNucleoporin NUP96\tLmjF36.2510\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2520\tLmjF.36.2520\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7070\tC\tsmall nuclear RNA-activating protein\tLmjF36.2520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2530\tLmjF.36.2530\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7080\tC\tATP-dependent DEAD/H RNA helicase, putative\tLmjF36.2530\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2540\tLmjF.36.2540\t\tGO:0005783\tPMID:18364711\tRCA\t\tC\tC-4 sterol methyl oxidase, putative\tLmjF36.2540\tmRNA\ttaxon:347515\t20100826\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2600\tLmjF.36.2600\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7510\tC\tcyclin-e binding protein 1-like protein\tLmjF36.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2600\tLmjF.36.2600\t\tGO:0005930\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7510\tC\tcyclin-e binding protein 1-like protein\tLmjF36.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2610\tFPGS\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7520\tC\tfolylpolyglutamate synthetase\tLmjF36.2610\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2620\tLmjF.36.2620\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7540\tC\tVRR-NUC domain containing protein, putative\tLmjF36.2620\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"TriTrypDB\tLmjF.36.2790\tFLAM1\t\tGO:0000331\tGO_REF:0000024\tISO\tGeneDB:TcCLB.509537.50\tC\tFlagellar Member 1\tLmjF36.2790\tmRNA\ttaxon:347515\t20150318\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2790\tFLAM1\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7230\tC\tFlagellar Member 1\tLmjF36.2790\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2790\tFLAM1\t\tGO:0031514\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7230\tC\tFlagellar Member 1\tLmjF36.2790\tmRNA\ttaxon:347515\t20150813\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2800\tLmjF.36.2800\t\tGO:0000776\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7240\tC\thypothetical protein, conserved\tLmjF36.2800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2800\tLmjF.36.2800\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7240\tC\thypothetical protein, conserved\tLmjF36.2800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2800\tLmjF.36.2800\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7240\tP\thypothetical protein, conserved\tLmjF36.2800\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2810\tLmjF.36.2810\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7250\tC\thypothetical protein, conserved\tLmjF36.2810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2810\tLmjF.36.2810\t\tGO:0020016\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7250\tC\thypothetical protein, conserved\tLmjF36.2810\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2820\tLmjF.36.2820\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7270\tC\thypothetical protein, conserved\tLmjF36.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2820\tLmjF.36.2820\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7270\tC\thypothetical protein, conserved\tLmjF36.2820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2850\tLmjF.36.2850\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7320\tC\thypothetical protein, conserved\tLmjF36.2850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2850\tLmjF.36.2850\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7320\tC\thypothetical protein, conserved\tLmjF36.2850\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2850\tLmjF.36.2850\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7320\tC\thypothetical protein, 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2880\tLmjF.36.2880\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7350\tC\thypothetical protein, conserved\tLmjF36.2880\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2880\tLmjF.36.2880\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7350\tC\thypothetical protein, conserved\tLmjF36.2880\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2890\tABCG6\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7360\tC\tATP-binding cassette protein subfamily G, member 6, putative\tLmjF36.2890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2890\tABCG6\t\tGO:0042626\tPMID:17030997\tISM\t\tF\tATP-binding cassette protein subfamily G, member 6, putative\tLmjF36.2890\tmRNA\ttaxon:347515\t20090608\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2900\tLmjF.36.2900\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7370\tC\thypothetical protein, conserved\tLmjF36.2900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2910\tLmjF.36.2910\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7380\tC\thypothetical protein, conserved\tLmjF36.2910\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2920\tLmjF.36.2920\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7390\tC\tPHF5-like protein, putative\tLmjF36.2920\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2990\tLmjF.36.2990\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7430\tC\tGTP-binding protein, putative\tLmjF36.2990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3000\tLmjF.36.3000\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7440\tC\tATP-dependent RNA helicase, putative\tLmjF36.3000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3000\tLmjF.36.3000\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7440\tC\tATP-dependent 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3020\tRRP41A\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7450\tC\texosome complex exonuclease RRP41A\tLmjF36.3020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3020\tRRP41A\t\tGO:0006364\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7450\tP\texosome complex exonuclease RRP41A\tLmjF36.3020\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3020\tRRP41A\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7450\tC\texosome complex 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3040\tLmjF.36.3040\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7470\tC\tpre-mRNA branch site protein p14, putative\tLmjF36.3040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3040\tLmjF.36.3040\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7470\tC\tpre-mRNA branch site protein p14, putative\tLmjF36.3040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3040\tLmjF.36.3040\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7470\tC\tpre-mRNA branch site protein p14, putative\tLmjF36.3040\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3060\tLmjF.36.3060\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7490\tC\tcullin-like protein\tLmjF36.3060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3070\tLmjF.36.3070\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7500\tC\tfibrillarin\tLmjF36.3070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3070\tLmjF.36.3070\t\tGO:0006364\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7500\tP\tfibrillarin\tLmjF36.3070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3070\tLmjF.36.3070\t\tGO:0030562\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7500\tF\tfibrillarin\tLmjF36.3070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3070\tLmjF.36.3070\t\tGO:0031428\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7500\tC\tfibrillarin\tLmjF36.3070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3080\tLmjF.36.3080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9390\tC\tOctanoyltransferase, putative\tLmjF36.3080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3090\tLmjF.36.3090\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9400\tP\thypothetical protein, conserved\tLmjF36.3090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3100\tLmjF.36.3100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9420\tC\tATP synthase, putative\tLmjF36.3100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3100\tLmjF.36.3100\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9420\tC\tATP synthase, putative\tLmjF36.3100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3220\tLmjF.36.3220\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9540\tC\thypothetical protein, conserved\tLmjF36.3220\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3230\tLmjF.36.3230\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9560\tC\toxidoreductase, putative\tLmjF36.3230\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3235\tLmjF.36.3235\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9570\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3260\tLmjF.36.3260\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10170\tC\thypothetical protein, conserved\tLmjF36.3260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3260\tLmjF.36.3260\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10170\tC\thypothetical protein, conserved\tLmjF36.3260\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3270\tLmjF.36.3270\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10160\tC\t60S ribosomal 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3300\tLmjF.36.3300\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10120\tC\thypothetical protein, conserved\tLmjF36.3300\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3310\tLmjF.36.3310\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10110\tC\tactin-like protein, putative\tLmjF36.3310\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3320\tLmjF.36.3320\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10100\tC\thypothetical protein, conserved\tLmjF36.3320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3330\tLmjF.36.3330\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10090\tC\thypothetical protein, conserved\tLmjF36.3330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3330\tLmjF.36.3330\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10090\tC\thypothetical protein, conserved\tLmjF36.3330\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3350\tLmjF.36.3350\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10080\tC\thypothetical protein, conserved\tLmjF36.3350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3360\tBDF3\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10070\tC\tBromodomain factor 3, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3410\tLmjF.36.3410\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10020\tC\tshort chain dehydrogenase-like protein\tLmjF36.3410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3410\tLmjF.36.3410\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10020\tP\tshort chain dehydrogenase-like protein\tLmjF36.3410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3410\tLmjF.36.3410\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10020\tC\tshort chain dehydrogenase-like protein\tLmjF36.3410\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3440\tLmjF.36.3440\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10000\tC\tclass-E vacuolar protein-sorting protein 24 (Vps24p), putative\tLmjF36.3440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3450\tLmjF.36.3450\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9990\tC\tglycosyl transferase-like protein\tLmjF36.3450\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3470\tLmjF.36.3470\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9980\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tLmjF36.3470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3470\tLmjF.36.3470\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9980\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tLmjF36.3470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3470\tLmjF.36.3470\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9980\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tLmjF36.3470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3470\tLmjF.36.3470\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9980\tC\t2-oxoglutarate dehydrogenase E1 component, putative\tLmjF36.3470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3480\tLmjF.36.3480\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9970\tC\tSmall acidic protein family, putative\tLmjF36.3480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3500\tLmjF.36.3500\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9950\tC\thypothetical protein, conserved\tLmjF36.3500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3500\tLmjF.36.3500\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9950\tC\thypothetical protein, conserved\tLmjF36.3500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3520\tLmjF.36.3520\t\tGO:0005739\tPMID:21610103|GO_REF:0000024\tISO\tGeneDB:Tb927.11.9930\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF36.3520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3520\tLmjF.36.3520\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9930\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF36.3520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3520\tLmjF.36.3520\t\tGO:0005747\tPMID:21610103|GO_REF:0000024\tISO\tGeneDB:Tb927.11.9930\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF36.3520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3520\tLmjF.36.3520\t\tGO:0006120\tPMID:21610103|GO_REF:0000024\tISO\tGeneDB:Tb927.11.9930\tP\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF36.3520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3520\tLmjF.36.3520\t\tGO:0008137\tPMID:21610103|GO_REF:0000024\tISO\tGeneDB:Tb927.11.9930\tF\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF36.3520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3520\tLmjF.36.3520\t\tGO:0016491\tPMID:21610103|GO_REF:0000024\tISO\tGeneDB:Tb927.11.9930\tF\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF36.3520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3520\tLmjF.36.3520\t\tGO:0030964\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9930\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF36.3520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3530\tLmjF.36.3530\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9920\tC\tpolyubiquitin, putative\tLmjF36.3530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3530\tLmjF.36.3530\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9920\tC\tpolyubiquitin, putative\tLmjF36.3530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3530\tLmjF.36.3530\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9920\tC\tpolyubiquitin, putative\tLmjF36.3530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3540\tLmjF.36.3540\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9910\tC\tDomain of unknown function (DUF3846)/TPR repeat, putative\tLmjF36.3540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3540\tLmjF.36.3540\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9910\tC\tDomain of unknown function (DUF3846)/TPR repeat, putative\tLmjF36.3540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3540\tLmjF.36.3540\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9910\tC\tDomain of unknown function (DUF3846)/TPR repeat, putative\tLmjF36.3540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3570\tLmjF.36.3570\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9890\tC\tsignal recognition particle receptor like protein, putative\tLmjF36.3570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3570\tLmjF.36.3570\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9890\tC\tsignal recognition particle receptor like protein, putative\tLmjF36.3570\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3600\tLmjF.36.3600\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9870\tC\thypothetical protein, conserved\tLmjF36.3600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3600\tLmjF.36.3600\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9870\tC\thypothetical protein, conserved\tLmjF36.3600\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3653\tLmjF.36.3653\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9830\tC\thypothetical protein, conserved\tLmjF36.3653\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3653\tLmjF.36.3653\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9830\tC\thypothetical protein, conserved\tLmjF36.3653\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3653\tLmjF.36.3653\t\tGO:0005762\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9830\tC\thypothetical protein, conserved\tLmjF36.3653\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3653\tLmjF.36.3653\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9830\tC\thypothetical protein, conserved\tLmjF36.3653\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3660\tNudix3\t\tGO:0020015\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9810\tC\tNUDIX hydrolase 3, putative\tLmjF36.3660\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3660\tNudix3\tNOT\tGO:0031087\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9810\tP\tNUDIX hydrolase 3, putative\tLmjF36.3660\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3660\tNudix3\tNOT\tGO:0050072\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9810\tF\tNUDIX hydrolase 3, putative\tLmjF36.3660\tmRNA\ttaxon:347515\t20150714\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3670\tLmjF.36.3670\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9800\tC\thypothetical protein, conserved\tLmjF36.3670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3690\tNUP119\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9780\tC\tNucleoporin NUP119\tLmjF36.3690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3690\tNUP119\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9780\tC\tNucleoporin NUP119\tLmjF36.3690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3690\tNUP119\t\tGO:0044611\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9780\tC\tNucleoporin NUP119\tLmjF36.3690\tmRNA\ttaxon:347515\t20170309\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3700\tLmjF.36.3700\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9770\tC\thypothetical protein, conserved\tLmjF36.3700\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3710\tLmjF.36.3710\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9760\tC\thypothetical protein, conserved\tLmjF36.3710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3720\tLmjF.36.3720\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9750\tC\tProtein of unknown function (DUF498/DUF598), putative\tLmjF36.3720\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3730\tLmjF.36.3730\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9740\tC\ttRNA intron endonuclease, catalytic C-terminal domain containing protein, putative\tLmjF36.3730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3730\tLmjF.36.3730\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9740\tC\ttRNA intron endonuclease, catalytic C-terminal domain containing protein, putative\tLmjF36.3730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3740\tLmjF.36.3740\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9730\tC\t60S ribosomal protein L34, putative\tLmjF36.3740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3760\tRPL10a\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9710\tC\t60S ribosomal protein L10a, putative\tLmjF36.3760\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3770\tLmjF.36.3770\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9700\tC\ttranscription factor BTF3, putative\tLmjF36.3770\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3780\tSPB1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9690\tC\tSpindle pole body protein 1, putative\tLmjF36.3780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3780\tSPB1\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9690\tC\tSpindle pole body protein 1, putative\tLmjF36.3780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3780\tSPB1\t\tGO:0044732\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9690\tC\tSpindle pole body protein 1, putative\tLmjF36.3780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3810\tGCV\t\tGO:0005739\tPMID:19961811\tISO\tGeneDB:LinJ.36.4000\tC\taminomethyltransferase, mitochondrial, putative\tLmjF36.3810\tmRNA\ttaxon:347515\t20100204\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3830\tLmjF.36.3830\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9660\tC\tZinc finger, C3HC4 type (RING finger), putative\tLmjF36.3830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3830\tLmjF.36.3830\t\tGO:0020016\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9660\tC\tZinc finger, C3HC4 type (RING finger), putative\tLmjF36.3830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3840\tLmjF.36.3840\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9640\tC\tglycyl tRNA synthetase, putative\tLmjF36.3840\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3870\tLmjF.36.3870\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9620\tC\thypothetical protein, conserved\tLmjF36.3870\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3880\tEIF3I\t\tGO:0003743\tGO_REF:0000012\tISA\tUniProtKB:Q13347\tF\tEukaryotic translation initiation factor 3 subunit 2\tLmjF36.3880\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3880\tEIF3I\t\tGO:0005737\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\tEukaryotic translation initiation factor 3 subunit 2\tLmjF36.3880\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3880\tEIF3I\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9610\tC\tEukaryotic translation initiation factor 3 subunit 2\tLmjF36.3880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3880\tEIF3I\t\tGO:0005852\tPMID:25539953\tIPI\tGeneDB:LmjF.28.2310\tC\tEukaryotic translation initiation factor 3 subunit 2\tLmjF36.3880\tmRNA\ttaxon:347515\t20160112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3880\tEIF3I\t\tGO:0006446\tGO_REF:0000012\tISA\tUniProtKB:Q13347\tP\tEukaryotic translation initiation factor 3 subunit 2\tLmjF36.3880\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3890\tLmjF.36.3890\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9600\tC\thypothetical protein, conserved\tLmjF36.3890\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3910\tLmjF.36.3910\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.9590\tC\tS-adenosylhomocysteine hydrolase\tLmjF36.3910\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3930\tTERT\t\tGO:0000333\tPMID:16416120\tISA\tUniProtKB:Q2NNR6_LEIAM\tC\ttelomerase reverse transcriptase, putative\tLmjF36.3930\tmRNA\ttaxon:347515\t20090805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3930\tTERT\t\tGO:0003721\tPMID:16416120\tISA\tUniProtKB:Q2NNR6_LEIAM\tF\ttelomerase reverse transcriptase, putative\tLmjF36.3930\tmRNA\ttaxon:347515\t20090805\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3930\tTERT\t\tGO:0003721\tPMID:16091631\tISO\tGeneDB:Tb927.11.10190\tF\ttelomerase reverse transcriptase, putative\tLmjF36.3930\tmRNA\ttaxon:347515\t20130828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3930\tTERT\t\tGO:0003723\tPMID:23423918\tISO\tGeneDB:Tb927.11.10190\tF\ttelomerase reverse transcriptase, putative\tLmjF36.3930\tmRNA\ttaxon:347515\t20130828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3930\tTERT\t\tGO:0005634\tPMID:23423918\tISO\tGeneDB:Tb927.11.10190\tC\ttelomerase reverse transcriptase, putative\tLmjF36.3930\tmRNA\ttaxon:347515\t20130828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3930\tTERT\t\tGO:0006278\tPMID:16091631\tISO\tGeneDB:Tb927.11.10190\tP\ttelomerase reverse transcriptase, putative\tLmjF36.3930\tmRNA\ttaxon:347515\t20130828\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3930\tTERT\t\tGO:0007004\tPMID:16091631|GO_REF:0000024\tISO\tGeneDB:Tb927.11.10190\tP\ttelomerase reverse transcriptase, putative\tLmjF36.3930\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3970\tLmjF.36.3970\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10210\tC\thypothetical protein, conserved\tLmjF36.3970\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3970\tLmjF.36.3970\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10210\tC\thypothetical protein, conserved\tLmjF36.3970\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3980\tLmjF.36.3980\t\tGO:0000993\tPMID:21363968|GO_REF:0000024\tISO\tGeneDB:Tb927.11.10230\tF\tRNA polymerase-associated protein CDC73, putative\tLmjF36.3980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3980\tLmjF.36.3980\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10230\tC\tRNA polymerase-associated protein CDC73, putative\tLmjF36.3980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3980\tLmjF.36.3980\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10230\tC\tRNA polymerase-associated protein CDC73, putative\tLmjF36.3980\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3980\tLmjF.36.3980\t\tGO:0016593\tPMID:21363968|GO_REF:0000024\tISO\tGeneDB:Tb927.11.10230\tC\tRNA polymerase-associated protein CDC73, putative\tLmjF36.3980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3980\tLmjF.36.3980\t\tGO:0032968\tPMID:21363968|GO_REF:0000024\tISO\tGeneDB:Tb927.11.10230\tP\tRNA polymerase-associated protein CDC73, putative\tLmjF36.3980\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3990\tHsIV\t\tGO:0004176\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10240\tF\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tLmjF36.3990\tmRNA\ttaxon:347515\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3990\tHsIV\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10240\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tLmjF36.3990\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3990\tHsIV\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10240\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tLmjF36.3990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3990\tHsIV\t\tGO:0006264\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10240\tP\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tLmjF36.3990\tmRNA\ttaxon:347515\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3990\tHsIV\t\tGO:0009376\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10240\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tLmjF36.3990\tmRNA\ttaxon:347515\t20110520\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3990\tHsIV\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10240\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family 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Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3990\tHsIV\t\tGO:0070581\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10240\tP\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tLmjF36.3990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3990\tHsIV\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10240\tC\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tLmjF36.3990\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4000\tLmjF.36.4000\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10250\tC\thypothetical protein, conserved\tLmjF36.4000\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4000\tLmjF.36.4000\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10250\tC\thypothetical protein, conserved\tLmjF36.4000\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4010\tLmjF.36.4010\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10260\tC\thypothetical protein, conserved\tLmjF36.4010\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4020\tLmjF.36.4020\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10270\tC\tGolgi SNAP receptor complex member 1, putative\tLmjF36.4020\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4030\tLmjF.36.4030\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10280\tC\tzinc carboxypeptidase, putative\tLmjF36.4030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4060\tRCCP\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10330\tC\tISWI complex protein\tLmjF36.4060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4060\tRCCP\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10330\tC\tISWI complex protein\tLmjF36.4060\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4060\tRCCP\t\tGO:0031010\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10330\tC\tISWI complex protein\tLmjF36.4060\tmRNA\ttaxon:347515\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4060\tRCCP\t\tGO:0044212\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10330\tF\tISWI complex protein\tLmjF36.4060\tmRNA\ttaxon:347515\t20160706\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4070\tLmjF.36.4070\t\tGO:0004721\tGO_REF:0000002\tISA\tUniProtKB:PGAM5_DROME\tF\tphosphoglycerate mutase family member 5, putative\tLmjF36.4070\tmRNA\ttaxon:347515\t20140603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4070\tLmjF.36.4070\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10340\tC\tphosphoglycerate mutase family member 5, putative\tLmjF36.4070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4070\tLmjF.36.4070\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10340\tC\tphosphoglycerate mutase family member 5, putative\tLmjF36.4070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4070\tLmjF.36.4070\t\tGO:0043539\tGO_REF:0000002\tISA\tUniProtKB:PGAM5_DROME\tF\tphosphoglycerate mutase family member 5, putative\tLmjF36.4070\tmRNA\ttaxon:347515\t20140603\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4080\tLmjF.36.4080\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10350\tC\thypothetical protein, conserved\tLmjF36.4080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4080\tLmjF.36.4080\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10350\tC\thypothetical protein, conserved\tLmjF36.4080\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4090\tLmjF.36.4090\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10360\tC\thypothetical protein, conserved\tLmjF36.4090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4100\tLmjF.36.4100\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10370\tC\tglycosyl hydrolase-like protein\tLmjF36.4100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4120\tLmjF.36.4120\t\tGO:0005763\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10400\tC\thypothetical protein, conserved\tLmjF36.4120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4145\tLmjF.36.4145\t\tGO:0003677\tPMID:15664659|GO_REF:0000024\tISO\tGeneDB:Tb927.11.10420|GeneDB:Tb11.01.2190\tF\tDNA-directed RNA polymerase I subunit, putative\tLmjF36.4145\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4145\tLmjF.36.4145\t\tGO:0006355\tGO_REF:0000002\tISS\t\tP\tDNA-directed RNA polymerase I subunit, putative\tLmjF36.4145\tmRNA\ttaxon:347515\t20110411\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4145\tLmjF.36.4145\t\tGO:0008270\tPMID:15664659\tISO\tGeneDB:Tb11.01.2190\tF\tDNA-directed RNA polymerase I subunit, putative\tLmjF36.4145\tmRNA\ttaxon:347515\t20110411\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4200\tLmjF.36.4200\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10470\tC\tArrestin (or S-antigen), N-terminal domain containing protein, putative\tLmjF36.4200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4200\tLmjF.36.4200\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10470\tC\tArrestin (or S-antigen), N-terminal domain containing protein, putative\tLmjF36.4200\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4280\tLmjF.36.4280\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9660\tC\thypothetical protein, conserved\tLmjF36.4280\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4360\tRPT6\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9740\tC\t19S proteasome regulatory subunit\tLmjF36.4360\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4360\tRPT6\t\tGO:0016887\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9740\tF\t19S proteasome regulatory subunit\tLmjF36.4360\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4370\tLmjF.36.4370\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9750\tC\tubiquitin protein ligase, putative\tLmjF36.4370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4390\tGCP2\t\tGO:0008275\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9770\tC\tgamma-tubulin complex component 2\tLmjF36.4390\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4390\tGCP2\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9770\tC\tgamma-tubulin complex component 2\tLmjF36.4390\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4390\tGCP2\tNOT\tGO:0043622\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9770\tP\tgamma-tubulin complex component 2\tLmjF36.4390\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4390\tGCP2\t\tGO:1904158\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9770\tP\tgamma-tubulin complex component 2\tLmjF36.4390\tmRNA\ttaxon:347515\t20160803\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4400\tLmjF.36.4400\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9780\tC\tATP-dependent DEAD/H RNA helicase, putative\tLmjF36.4400\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4400\tLmjF.36.4400\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9780\tC\tATP-dependent DEAD/H RNA helicase, putative\tLmjF36.4400\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4420\tLmjF.36.4420\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9800\tC\t60S ribosomal protein L22, putative\tLmjF36.4420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4420\tLmjF.36.4420\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9800\tC\t60S ribosomal protein L22, putative\tLmjF36.4420\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4440\tLmjF.36.4440\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9810\tC\thypothetical protein, conserved\tLmjF36.4440\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4460\tLmjF.36.4460\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9830\tC\thypothetical protein, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4470\tJ33\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9840\tC\tchaperone protein DnaJ, putative\tLmjF36.4470\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4480\tAAT14\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9850\tC\tamino acid transporter, putative\tLmjF36.4480\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4490\tLmjF.36.4490\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9860\tC\tMitochondrial N(5)-glutamine 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"GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4490\tLmjF.36.4490\t\tGO:0008757\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.9860\tF\tMitochondrial N(5)-glutamine methyltransferase MTQ1, putative\tLmjF36.4490\tmRNA\ttaxon:347515\t20120815\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4500\tLmjF.36.4500\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9870\tC\tProtein of unknown function (DUF2870), putative\tLmjF36.4500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4500\tLmjF.36.4500\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9870\tP\tProtein of unknown function (DUF2870), putative\tLmjF36.4500\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4500\tLmjF.36.4500\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9870\tC\tProtein of unknown function (DUF2870), putative\tLmjF36.4500\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4510\tRPL18\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9880\tC\t60S ribosomal protein L18, 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4580\tLmjF.36.4580\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9920\tC\thypothetical protein, conserved\tLmjF36.4580\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4590\tLmjF.36.4590\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9930\tC\tPHD-like zinc-binding domain containing protein, putative\tLmjF36.4590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4660\tLmjF.36.4660\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10020\tP\tVacuolar sorting protein 9 (VPS9) domain containing protein, putative\tLmjF36.4660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4670\tLmjF.36.4670\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10030\tC\thypothetical protein, conserved\tLmjF36.4670\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4710\tLmjF.36.4710\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10070\tC\thypothetical protein, conserved\tLmjF36.4710\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4730\tLmjF.36.4730\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10090\tC\thypothetical protein, conserved\tLmjF36.4730\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4730\tLmjF.36.4730\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.10090\tP\thypothetical protein, conserved\tLmjF36.4730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4750\tLmjF.36.4750\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10110\tC\tPIG-P, putative\tLmjF36.4750\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4760\tLmjF.36.4760\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10120\tC\thypothetical protein, conserved\tLmjF36.4760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4760\tLmjF.36.4760\t\tGO:0020023\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10120\tC\thypothetical protein, conserved\tLmjF36.4760\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4770\tLmjF.36.4770\t\tGO:0003723\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.10.10130\tF\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF36.4770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4770\tLmjF.36.4770\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.10130\tC\tmitochondrial RNA binding complex 1 subunit, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4910\tLmjF.36.4910\t\tGO:0030990\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11010\tC\thypothetical protein, conserved\tLmjF36.4910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4910\tLmjF.36.4910\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11010\tC\thypothetical protein, conserved\tLmjF36.4910\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4920\tLmjF.36.4920\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.11000\tC\thypothetical 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5050\tLmjF.36.5050\t\tGO:0005783\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10870\tC\t32 kDa ER-associated protein, putative\tLmjF36.5050\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5060\tLmjF.36.5060\t\tGO:0000478\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10860\tP\tNin one binding (NOB1) Zn-ribbon like, putative\tLmjF36.5060\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5070\tLmjF.36.5070\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10850\tC\thypothetical protein, conserved\tLmjF36.5070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5080\tLmjF.36.5080\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10840\tC\thypothetical protein, conserved\tLmjF36.5080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF36.5090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5090\tLmjF.36.5090\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10820\tC\tCasein kinase II subunit beta, putative\tLmjF36.5090\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5100\tLmjF.36.5100\t\tGO:0003729\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10810\tF\thypothetical protein, conserved\tLmjF36.5100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5100\tLmjF.36.5100\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10810\tC\thypothetical protein, conserved\tLmjF36.5100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5110\tLmjF.36.5110\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10800\tC\tDomain of unknown function (DUF4496), putative\tLmjF36.5110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5110\tLmjF.36.5110\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10800\tC\tDomain of unknown function (DUF4496), putative\tLmjF36.5110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5110\tLmjF.36.5110\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10800\tC\tDomain of unknown function (DUF4496), putative\tLmjF36.5110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5120\tLmjF.36.5120\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10790\tC\t40S ribosomal protein SA, putative\tLmjF36.5120\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5130\tLmjF.36.5130\t\tGO:0005739\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10780\tC\thypothetical protein, conserved\tLmjF36.5130\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5130\tLmjF.36.5130\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10780\tC\thypothetical protein, conserved\tLmjF36.5130\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5140\tLmjF.36.5140\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10770\tC\tVHS domain containing protein, putative\tLmjF36.5140\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5150\tKIN-D\t\tGO:0000902\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10760\tP\tkinesin-D\tLmjF36.5150\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5150\tKIN-D\t\tGO:0003774\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin-D\tLmjF36.5150\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5150\tKIN-D\t\tGO:0005524\tGO_REF:0000011\tISM\tInterPro:IPR001752\tF\tkinesin-D\tLmjF36.5150\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5150\tKIN-D\t\tGO:0005875\tGO_REF:0000011\tISM\tInterPro:IPR001752\tC\tkinesin-D\tLmjF36.5150\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5150\tKIN-D\t\tGO:0008017\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10760\tF\tkinesin-D\tLmjF36.5150\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5150\tKIN-D\t\tGO:0015630\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10760\tC\tkinesin-D\tLmjF36.5150\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5150\tKIN-D\t\tGO:0016887\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10760\tF\tkinesin-D\tLmjF36.5150\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5150\tKIN-D\t\tGO:0043622\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10760\tP\tkinesin-D\tLmjF36.5150\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5150\tKIN-D\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10760\tC\tkinesin-D\tLmjF36.5150\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5160\tLmjF.36.5160\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10750\tC\tpre-mRNA-splicing factor CWC22, putative\tLmjF36.5160\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5190\tLmjF.36.5190\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10730\tC\tSWI/SNF-related helicase, putative\tLmjF36.5190\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5210\tLmjF.36.5210\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10710\tC\thypothetical protein, conserved\tLmjF36.5210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5210\tLmjF.36.5210\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10710\tC\thypothetical protein, conserved\tLmjF36.5210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5230\tLmjF.36.5230\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10690\tC\thypothetical protein, conserved\tLmjF36.5230\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5240\tLmjF.36.5240\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10670\tC\tglycosyl hydrolase, putative\tLmjF36.5240\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5250\tLmjF.36.5250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10660\tC\tconserved protein\tLmjF36.5250\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5250\tLmjF.36.5250\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10660\tC\tconserved protein\tLmjF36.5250\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5260\tAP3B3\t\tGO:0005794\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10650\tC\tAdaptor protein complex AP-3 subunit beta-3\tLmjF36.5260\tmRNA\ttaxon:347515\t20120524\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5260\tAP3B3\t\tGO:0005905\tGO_REF:0000012\tISA\tUniProtKB:O00203\tC\tAdaptor protein complex AP-3 subunit beta-3\tLmjF36.5260\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5260\tAP3B3\t\tGO:0006886\tGO_REF:0000012\tISA\tUniProtKB:O00203\tP\tAdaptor protein complex AP-3 subunit beta-3\tLmjF36.5260\tmRNA\ttaxon:347515\t20140507\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5260\tAP3B3\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10650\tP\tAdaptor protein complex AP-3 subunit beta-3\tLmjF36.5260\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5260\tAP3B3\t\tGO:0071470\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10650\tP\tAdaptor protein complex AP-3 subunit beta-3\tLmjF36.5260\tmRNA\ttaxon:347515\t20141126\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5270\tLmjF.36.5270\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10640\tC\tendonuclease/exonuclease protein-like protein\tLmjF36.5270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5270\tLmjF.36.5270\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10640\tC\tendonuclease/exonuclease protein-like protein\tLmjF36.5270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5290\tLmjF.36.5290\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.10620\tC\thypothetical protein, conserved\tLmjF36.5290\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5320\tLmjF.36.5320\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10590\tC\tGlutathione S-transferase, C-terminal domain containing protein, putative\tLmjF36.5320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5320\tLmjF.36.5320\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10590\tC\tGlutathione S-transferase, C-terminal domain containing protein, putative\tLmjF36.5320\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5330\tLmjF.36.5330\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10550\tC\thypothetical protein, conserved\tLmjF36.5330\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5350\tkkt2\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10520\tC\tkinetoplastid kinetochore protein 2, putative\tLmjF36.5350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5350\tkkt2\t\tGO:0007059\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10520\tP\tkinetoplastid kinetochore protein 2, putative\tLmjF36.5350\tmRNA\ttaxon:347515\t20140313\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5365\tLmjF.36.5365\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10500\tC\thypothetical protein, conserved\tLmjF36.5365\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5380\tLmjF.36.5380\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9440\tC\tNADH dehydrogenase, putative\tLmjF36.5380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5430\tLmjF.36.5430\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9390\tC\tMacrocin-O-methyltransferase (TylF), putative\tLmjF36.5430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5440\tLmjF.36.5440\t\tGO:0005929\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9380\tC\tSEP domain containing protein, putative\tLmjF36.5440\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5470\tLmjF.36.5470\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9350\tC\thypothetical protein, conserved\tLmjF36.5470\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5540\tPSTK\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9290\tC\tPhosphoseryl-tRNA Kinase, putative\tLmjF36.5540\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5570\tLmjF.36.5570\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9270\tC\temp24/gp25L/p24 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5590\tLmjF.36.5590\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9250\tP\tadenylyl cyclase-associated protein, putative\tLmjF36.5590\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5600\tLmjF.36.5600\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9210\tC\thypothetical protein, conserved\tLmjF36.5600\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5630\tLmjF.36.5630\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9170\tC\thypothetical protein, conserved\tLmjF36.5630\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5640\tCYC12\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9160\tC\tCyclin 12, L-type\tLmjF36.5640\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5640\tCYC12\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9160\tC\tCyclin 12, 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"NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5650\tLmjF.36.5650\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9150\tP\thypothetical protein, conserved\tLmjF36.5650\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5660\tPOMP20\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9140\tC\tPresent in the outer mitochondrial membrane proteome 20\tLmjF36.5660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5660\tPOMP20\t\tGO:0005741\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9140\tC\tPresent in the outer 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5680\tLmjF.36.5680\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9120\tC\thypothetical protein, conserved\tLmjF36.5680\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5690\tLmjF.36.5690\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9110\tC\thypothetical protein, conserved\tLmjF36.5690\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5730\tLmjF.36.5730\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9070\tC\thypothetical protein, conserved\tLmjF36.5730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5730\tLmjF.36.5730\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9070\tC\thypothetical protein, conserved\tLmjF36.5730\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5770\tLmjF.36.5770\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9030\tC\tMechanosensitive ion channel MscS, putative\tLmjF36.5770\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5780\tLmjF.36.5780\t\tGO:0005643\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.9020\tC\tGcd10p family, putative\tLmjF36.5780\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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putative\tLmjF36.5790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5790\tLmjF.36.5790\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9010\tC\tleucine-rich repeat protein (LRRP), putative\tLmjF36.5790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5810\tLmjF.36.5810\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8990\tC\thypothetical protein, conserved\tLmjF36.5810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5830\tLmjF.36.5830\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2980\tC\tNitroreductase family, putative\tLmjF36.5830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5830\tLmjF.36.5830\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.2980\tP\tNitroreductase family, putative\tLmjF36.5830\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5830\tLmjF.36.5830\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.7.2980\tC\tNitroreductase family, putative\tLmjF36.5830\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5850\tKH1\t\tGO:0006605\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.5850\tP\tflagellum targeting protein kharon1, putative\tLmjF36.5850\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5850\tKH1\t\tGO:0020016\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.5850\tC\tflagellum targeting protein kharon1, putative\tLmjF36.5850\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5880\tLmjF.36.5880\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8920\tC\tras-like small GTPases, putative\tLmjF36.5880\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5900\tCEPT\t\tGO:0004142\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8900\tF\tcholine/ethanolamine phosphotransferase, putative\tLmjF36.5900\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5900\tCEPT\t\tGO:0005635\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8900\tC\tcholine/ethanolamine phosphotransferase, putative\tLmjF36.5900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5900\tCEPT\t\tGO:0005783\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8900\tC\tcholine/ethanolamine phosphotransferase, putative\tLmjF36.5900\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5900\tCEPT\t\tGO:0006646\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8900\tP\tcholine/ethanolamine phosphotransferase, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5940\tLmjF.36.5940\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8850\tC\tA distinct subfamily of CDD/CDA-like deaminases, putative\tLmjF36.5940\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5970\tFAZ5\t\tGO:0005856\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8830\tC\tFlagellum attachment zone protein 5\tLmjF36.5970\tmRNA\ttaxon:347515\t20151211\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5980\tLmjF.36.5980\t\tGO:0003723\tPMID:20444260\tISM\t\tF\thypothetical 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6000\tLmjF.36.6000\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8810\tC\tl6202.3-like protein\tLmjF36.6000\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6010\tLmjF.36.6010\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8800\tC\thypothetical protein, conserved\tLmjF36.6010\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6010\tLmjF.36.6010\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8800\tC\thypothetical protein, 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"obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6020\tLmjF.36.6020\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8790\tC\tOTU-like cysteine protease, putative\tLmjF36.6020\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6030\tLmjF.36.6030\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8780\tC\thypothetical protein, conserved\tLmjF36.6030\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6070\tLmjF.36.6070\t\tGO:0004672\tGO_REF:0000002\tIEA\t\tF\tdisgorgin, putative\tLmjF36.6070\tmRNA\ttaxon:347515\t20220901\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6070\tLmjF.36.6070\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8770\tC\tdisgorgin, putative\tLmjF36.6070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6070\tLmjF.36.6070\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8770\tC\tdisgorgin, putative\tLmjF36.6070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6070\tLmjF.36.6070\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8770\tC\tdisgorgin, putative\tLmjF36.6070\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6080\tLmjF.36.6080\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8750\tC\trab-like GTPase activating protein, putative\tLmjF36.6080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6080\tLmjF.36.6080\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8750\tC\trab-like GTPase activating protein, putative\tLmjF36.6080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6080\tLmjF.36.6080\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8750\tC\trab-like GTPase activating protein, putative\tLmjF36.6080\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6090\tLmjF.36.6090\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8730\tC\tABC1 family, putative\tLmjF36.6090\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6100\tLmjF.36.6100\t\tGO:0005737\tPMID:18442996\tISO\tGeneDB:Tb927.10.8720\tC\tCCR4-NOT transcription complex subunit 10, putative\tLmjF36.6100\tmRNA\ttaxon:347515\t20120409\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6100\tLmjF.36.6100\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8720\tC\tCCR4-NOT transcription complex subunit 10, putative\tLmjF36.6100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6100\tLmjF.36.6100\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8720\tP\tCCR4-NOT transcription complex subunit 10, putative\tLmjF36.6100\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6100\tLmjF.36.6100\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8720\tC\tCCR4-NOT transcription complex subunit 10, putative\tLmjF36.6100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6100\tLmjF.36.6100\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8720\tC\tCCR4-NOT transcription complex subunit 10, putative\tLmjF36.6100\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6110\tCETN3\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8710\tC\tcentrin-3\tLmjF36.6110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6110\tCETN3\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8710\tC\tcentrin-3\tLmjF36.6110\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6110\tCETN3\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8710\tC\tcentrin-3\tLmjF36.6110\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6110\tCETN3\t\tGO:0036159\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8710\tP\tcentrin-3\tLmjF36.6110\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6110\tCETN3\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8710\tP\tcentrin-3\tLmjF36.6110\tmRNA\ttaxon:347515\t20160726\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6120\tLmjF.36.6120\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8690\tC\tTIGR00269 family protein, putative\tLmjF36.6120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6120\tLmjF.36.6120\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8690\tC\tTIGR00269 family protein, putative\tLmjF36.6120\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6160\tLmjF.36.6160\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8650\tC\thypothetical protein, conserved\tLmjF36.6160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6160\tLmjF.36.6160\t\tGO:0005643\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8650\tC\thypothetical protein, conserved\tLmjF36.6160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6160\tLmjF.36.6160\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8650\tC\thypothetical protein, conserved\tLmjF36.6160\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6170\tLmjF.36.6170\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8640\tC\thypothetical protein, conserved\tLmjF36.6170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6170\tLmjF.36.6170\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8640\tC\thypothetical protein, conserved\tLmjF36.6170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6170\tLmjF.36.6170\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8640\tC\thypothetical protein, conserved\tLmjF36.6170\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6180\tLmjF.36.6180\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8630\tC\tSucrase/ferredoxin-like, putative\tLmjF36.6180\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6180\tLmjF.36.6180\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8630\tC\tSucrase/ferredoxin-like, putative\tLmjF36.6180\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6180\tLmjF.36.6180\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8630\tC\tSucrase/ferredoxin-like, putative\tLmjF36.6180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6180\tLmjF.36.6180\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8630\tC\tSucrase/ferredoxin-like, putative\tLmjF36.6180\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6210\tLmjF.36.6210\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8600\tC\tVps54-like protein, putative\tLmjF36.6210\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6250\tLmjF.36.6250\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8560\tC\tsmall G-protein, putative\tLmjF36.6250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6250\tLmjF.36.6250\t\tGO:0035869\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8560\tC\tsmall G-protein, putative\tLmjF36.6250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6250\tLmjF.36.6250\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8560\tC\tsmall G-protein, putative\tLmjF36.6250\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6270\tJ6\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8540\tC\tchaperone protein DnaJ, putative\tLmjF36.6270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6270\tJ6\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8540\tP\tchaperone protein DnaJ, putative\tLmjF36.6270\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6270\tJ6\t\tGO:0031981\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8540\tC\tchaperone protein DnaJ, putative\tLmjF36.6270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6270\tJ6\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8540\tC\tchaperone protein DnaJ, putative\tLmjF36.6270\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6280\tGT3\t\tGO:0005353\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6280\tF\tglucose transporter 3\tLmjF36.6280\tmRNA\ttaxon:347515\t20131114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6280\tGT3\t\tGO:0005354\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6280\tF\tglucose transporter 3\tLmjF36.6280\tmRNA\ttaxon:347515\t20131114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6280\tGT3\t\tGO:0005886\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8490\tC\tglucose transporter 3\tLmjF36.6280\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6280\tGT3\t\tGO:0015578\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6280\tF\tglucose transporter 3\tLmjF36.6280\tmRNA\ttaxon:347515\t20131114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6280\tGT3\t\tGO:0015591\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6280\tF\tglucose transporter 3\tLmjF36.6280\tmRNA\ttaxon:347515\t20110707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6280\tGT3\t\tGO:0015752\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6280\tP\tglucose transporter 3\tLmjF36.6280\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6280\tGT3\t\tGO:0015758\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6280\tP\tglucose transporter 3\tLmjF36.6280\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6280\tGT3\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8490\tC\tglucose transporter 3\tLmjF36.6280\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6280\tGT3\t\tGO:0055056\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6280\tF\tglucose transporter 3\tLmjF36.6280\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6280\tGT3\t\tGO:0070258\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6280\tC\tglucose transporter 3\tLmjF36.6280\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0000302\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6290\tP\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20131114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0005353\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6290\tF\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20131114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0005354\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6290\tF\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20131114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0005886\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8490\tC\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0015578\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6290\tF\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20131114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0015591\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6290\tF\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20110707\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0015752\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6290\tP\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0015758\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6290\tP\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8490\tC\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0055056\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6290\tF\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0070258\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6290\tC\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6300\tGT1\t\tGO:0005353\tPMID:17306380\tISO\tGeneDB:LmxM.36.6300\tF\tglucose transporter 1\tLmjF36.6300\tmRNA\ttaxon:347515\t20131114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6300\tGT1\t\tGO:0005354\tPMID:17306380\tISO\tGeneDB:LmxM.36.6300\tF\tglucose transporter 1\tLmjF36.6300\tmRNA\ttaxon:347515\t20131114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6300\tGT1\t\tGO:0005355\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6300\tF\tglucose transporter 1\tLmjF36.6300\tmRNA\ttaxon:347515\t20131114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6300\tGT1\t\tGO:0005886\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8490\tC\tglucose transporter 1\tLmjF36.6300\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6300\tGT1\t\tGO:0015578\tPMID:17306380\tISO\tGeneDB:LmxM.36.6300\tF\tglucose transporter 1\tLmjF36.6300\tmRNA\ttaxon:347515\t20131114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6300\tGT1\t\tGO:0015758\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6300\tP\tglucose transporter 1\tLmjF36.6300\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6300\tGT1\t\tGO:0031514\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6300\tC\tglucose transporter 1\tLmjF36.6300\tmRNA\ttaxon:347515\t20131112\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6300\tGT1\t\tGO:0051286\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8490\tC\tglucose transporter 1\tLmjF36.6300\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6320\tTOR1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8420\tC\tTarget of rapamycin kinase 1\tLmjF36.6320\tmRNA\ttaxon:347515\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6320\tTOR1\t\tGO:0008361\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8420\tP\tTarget of rapamycin kinase 1\tLmjF36.6320\tmRNA\ttaxon:347515\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6320\tTOR1\t\tGO:0031931\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8420\tC\tTarget of rapamycin kinase 1\tLmjF36.6320\tmRNA\ttaxon:347515\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6320\tTOR1\t\tGO:1903432\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8420\tP\tTarget of rapamycin kinase 1\tLmjF36.6320\tmRNA\ttaxon:347515\t20151008\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6330\tLmjF.36.6330\t\tGO:0020015\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8410\tC\thypothetical protein, conserved\tLmjF36.6330\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6345\tLmjF.36.6345\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8380\tC\thypothetical protein, conserved\tLmjF36.6345\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6347\tLmjF.36.6347\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8370\tP\thypothetical protein, conserved\tLmjF36.6347\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6350\tPARN2\t\tGO:0003676\tPMID:21743004\tISO\tGeneDB:Tb927.10.8360\tF\tpoly(A)-specific ribonuclease PARN, putative\tLmjF36.6350\tmRNA\ttaxon:347515\t20091114\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6350\tPARN2\t\tGO:0004518\tPMID:21743004|GO_REF:0000024\tISO\tGeneDB:Tb927.10.8360\tF\tpoly(A)-specific ribonuclease PARN, putative\tLmjF36.6350\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6350\tPARN2\t\tGO:0005634\tPMID:21743004\tISO\tGeneDB:Tb927.10.8360\tC\tpoly(A)-specific ribonuclease PARN, putative\tLmjF36.6350\tmRNA\ttaxon:347515\t20090731\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6360\tLmjF.36.6360\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7670\tC\tProtein of unknown function (DUF2962), putative\tLmjF36.6360\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6370\tLmjF.36.6370\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7680\tC\tGTPase activating protein, putative\tLmjF36.6370\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6380\tLmjF.36.6380\t\tGO:0005930\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7690\tC\trib72 protein-like protein\tLmjF36.6380\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6380\tLmjF.36.6380\t\tGO:0060285\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7690\tP\trib72 protein-like protein\tLmjF36.6380\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6400\tLmjF.36.6400\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7710\tC\t40S ribosomal protein S8, putative\tLmjF36.6400\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6410\tLmjF.36.6410\t\tGO:0036064\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7730\tC\tDomain of unknown function (DUF4496), putative\tLmjF36.6410\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6430\tLmjF.36.6430\t\tGO:0005794\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7740\tC\tprotein transport protein Sec23-like protein\tLmjF36.6430\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6430\tLmjF.36.6430\t\tGO:0006888\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7740\tP\tprotein transport protein Sec23-like protein\tLmjF36.6430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6430\tLmjF.36.6430\t\tGO:0030127\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7740\tC\tprotein transport protein Sec23-like protein\tLmjF36.6430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6430\tLmjF.36.6430\t\tGO:0048197\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7740\tP\tprotein transport protein Sec23-like protein\tLmjF36.6430\tmRNA\ttaxon:347515\t20090624\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6430\tLmjF.36.6430\t\tGO:0070971\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7740\tC\tprotein transport protein Sec23-like protein\tLmjF36.6430\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6440\tLmjF.36.6440\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7750\tC\thypothetical protein, conserved\tLmjF36.6440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6440\tLmjF.36.6440\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7750\tC\thypothetical protein, conserved\tLmjF36.6440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6440\tLmjF.36.6440\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7750\tC\thypothetical protein, conserved\tLmjF36.6440\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6450\tLmjF.36.6450\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7760\tC\thypothetical protein, conserved\tLmjF36.6450\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6490\tLmjF.36.6490\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7790\tC\tubiquitin fusion degradation protein, putative\tLmjF36.6490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6490\tLmjF.36.6490\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7790\tC\tubiquitin fusion degradation protein, putative\tLmjF36.6490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6490\tLmjF.36.6490\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7790\tP\tubiquitin fusion degradation protein, putative\tLmjF36.6490\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6520\tLmjF.36.6520\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7810\tC\thypothetical protein, conserved\tLmjF36.6520\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6520\tLmjF.36.6520\t\tGO:0005730\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7810\tC\thypothetical protein, conserved\tLmjF36.6520\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6523\tLmjF.36.6523\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7820\tC\thypothetical protein, conserved\tLmjF36.6523\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6530\tLmjF.36.6530\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7840\tC\thypothetical protein, conserved\tLmjF36.6530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6530\tLmjF.36.6530\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7840\tC\thypothetical protein, conserved\tLmjF36.6530\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6600\tLmjF.36.6600\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7890\tC\thypothetical 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RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6660\tLmjF.36.6660\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7940\tC\tmethyltransferase, putative\tLmjF36.6660\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6660\tLmjF.36.6660\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.7940\tC\tmethyltransferase, putative\tLmjF36.6660\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6740\tLmjF.36.6740\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8010\tC\thypothetical protein, conserved\tLmjF36.6740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6740\tLmjF.36.6740\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8010\tC\thypothetical protein, conserved\tLmjF36.6740\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6750\tPOP\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8020\tC\tserine peptidase clan SC, family S9A, putative\tLmjF36.6750\tmRNA\ttaxon:347515\t20170221\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6750\tPOP\t\tGO:0070012\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8020\tF\tserine peptidase clan SC, family S9A, putative\tLmjF36.6750\tmRNA\ttaxon:347515\t20100618\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6760\tLmjF.36.6760\t\tGO:0005654\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8030\tC\tATP synthase delta (OSCP) subunit, 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reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6770\tLmjF.36.6770\t\tGO:0042493\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.8040\tP\tadaptin complex 1 subunit, putative\tLmjF36.6770\tmRNA\ttaxon:347515\t20141125\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002331 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6780\tLmjF.36.6780\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8050\tC\tnuclear lim interactor-interacting factor, putative\tLmjF36.6780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6780\tLmjF.36.6780\t\tGO:0010608\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8050\tP\tnuclear lim interactor-interacting factor, putative\tLmjF36.6780\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6785\tLmjF.36.6785\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8060\tC\thypothetical protein\tLmjF36.6785\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6785\tLmjF.36.6785\t\tGO:0097014\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8060\tC\thypothetical protein\tLmjF36.6785\tpseudogenic_transcript\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6790\tLmjF.36.6790\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8070\tC\tATPase, putative\tLmjF36.6790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6790\tLmjF.36.6790\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8070\tC\tATPase, putative\tLmjF36.6790\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6800\tLmjF.36.6800\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8080\tC\tCG1104 protein-like protein\tLmjF36.6800\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6810\tLmjF.36.6810\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8090\tC\tThioesterase superfamily, putative\tLmjF36.6810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6810\tLmjF.36.6810\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8090\tC\tThioesterase superfamily, 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"EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6810\tLmjF.36.6810\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8090\tC\tThioesterase superfamily, putative\tLmjF36.6810\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6820\tLmjF.36.6820\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8100\tC\thypothetical protein, conserved\tLmjF36.6820\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6840\tLmjF.36.6840\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8110\tC\tProtein of 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qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6850\tLmjF.36.6850\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8120\tC\tRNA ligase/AAA domain containing protein, putative\tLmjF36.6850\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6860\tLmjF.36.6860\t\tGO:0035869\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8130\tC\tcalphotin-like protein\tLmjF36.6860\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": 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qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6900\tLmjF.36.6900\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8180\tC\thypothetical protein, conserved\tLmjF36.6900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6900\tLmjF.36.6900\t\tGO:1990900\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8180\tC\thypothetical protein, conserved\tLmjF36.6900\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6910\tLmjF.36.6910\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8190\tC\tT-complex protein 1, theta subunit, putative\tLmjF36.6910\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6920\tLmjF.36.6920\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8200\tC\tRibosomal protein L1p/L10e family, putative\tLmjF36.6920\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6930\tLmjF.36.6930\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8210\tC\tRNA editing comple protein 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"taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6935\tLmjF.36.6935\t\tGO:0005739\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8220\tC\thypothetical protein, conserved\tLmjF36.6935\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6935\tLmjF.36.6935\t\tGO:0020023\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8220\tC\thypothetical protein, conserved\tLmjF36.6935\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6970\tLmjF.36.6970\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8250\tC\thypothetical protein, 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"type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6985\tU1A\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8300\tC\tU1A small nuclear ribonucleoprotein\tLmjF36.6985|RBP14\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6985\tU1A\t\tGO:0005685\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8300\tC\tU1A small nuclear ribonucleoprotein\tLmjF36.6985|RBP14\tmRNA\ttaxon:347515\t20170621\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to BFO:0000050 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6985\tU1A\t\tGO:0045292\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8300\tP\tU1A small nuclear ribonucleoprotein\tLmjF36.6985|RBP14\tmRNA\ttaxon:347515\t20170621\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002264 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6990\tLmjF.36.6990\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8310\tC\tacetyltransferase, putative\tLmjF36.6990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6990\tLmjF.36.6990\t\tGO:0005654\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8310\tC\tacetyltransferase, putative\tLmjF36.6990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6990\tLmjF.36.6990\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8310\tC\tacetyltransferase, putative\tLmjF36.6990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6990\tLmjF.36.6990\t\tGO:0010485\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8310\tF\tacetyltransferase, putative\tLmjF36.6990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0002327 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6990\tLmjF.36.6990\t\tGO:0031981\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8310\tC\tacetyltransferase, putative\tLmjF36.6990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6990\tLmjF.36.6990\t\tGO:0097014\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8310\tC\tacetyltransferase, putative\tLmjF36.6990\tmRNA\ttaxon:347515\t20190510\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6995\tCOXIX\t\tGO:0005737\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.8320\tC\tcytochrome oxidase subunit IX, putative\tLmjF36.6995\tmRNA\ttaxon:347515\t20170822\tGeneDB\t\t", "type": "Invalid Qualifier", "message": "GORULE:0000059 Upgrading qualifier/relation to RO:0001025 when reading GAF 2.1", "obj": "EMPTY", "taxon": "NCBITaxon:347515", "rule": 59 } ], "gorule-0000002": [], "gorule-0000005": [], "gorule-0000006": [], "gorule-0000007": [], "gorule-0000008": [ { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0110\tLmjF.02.0110\t\tGO:0006810\tGO_REF:0000012\tISA\tUniProtKB:O43592\tP\ttRNA exportin, putative\tLmjF02.0110\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0520\tLmjF.04.0520\t\tGO:0006810\tPMID:19240115\tISS\t\tP\tpalmitoyl acyltransferase 1, putative\tLmjF04.0520\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.1160\tLmjF.06.1160\t\tGO:0007049\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5750\tP\thypothetical protein, conserved\tLmjF06.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1120\tLmjF.07.1120\t\tGO:0016049\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.570\tP\tproteasome regulatory non-ATP-ase subunit, putative\tLmjF07.1120\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0640\tLmjF.09.0640\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb11.01.4490\tP\tpalmitoyl acyltransferase 5, putative\tLmjF09.0640\tmRNA\ttaxon:347515\t20110725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1080\teif4g5\t\tGO:0006139\tPMID:15694484\tISA\tUniProtKB:Q04637\tP\tEukaryotic translation initiation factor 4 gamma 5\tLmjF10.1080\tmRNA\ttaxon:347515\t20100330\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1080\tLmjF.11.1080\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb11.02.4090\tP\tpalmitoyl acyltransferase 7, putative\tLmjF11.1080\tmRNA\ttaxon:347515\t20110817\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1090\tLmjF.11.1090\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb11.02.4090\tP\tpalmitoyl acyltransferase 7, putative\tLmjF11.1090\tmRNA\ttaxon:347515\t20110817\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1100\tCYP51\t\tGO:0000910\tPMID:25340392\tIMP\t\tP\tLanosterol 14-alpha demethylase\tLmjF11.1100|LDM|C14DM\tmRNA\ttaxon:347515\t20181113\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0260\tLmjF.13.0260\t\tGO:0016049\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4530\tP\tN-acetyltransferase subunit ARD1, putative\tLmjF13.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0650\tPAT6\t\tGO:0006810\tGO_REF:0000002\tISO\tGeneDB:Tb11.02.1710\tP\tpalmitoyl acyltransferase 6, putative\tLmjF13.0650\tmRNA\ttaxon:347515\t20110725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0010\tLmjF.14.0010\t\tGO:0016049\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4670\tP\texosome complex exonuclease, putative\tLmjF14.0010\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1440\tLmjF.14.1440\t\tGO:0000910\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3550\tP\tcytoskeleton associated protein, putative\tLmjF14.1440\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1320\teif4g2\t\tGO:0006139\tPMID:15694484\tISA\tEMBL:Q04637\tP\tEukaryotic translation initiation factor 4 gamma 2\tLmjF15.1320\tmRNA\ttaxon:347515\t20100329\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1460\tLmjF.15.1460\t\tGO:0031388\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tLmjF15.1460\tmRNA\ttaxon:347515\t20100921\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0800\tABCF2\t\tGO:0006810\tGO_REF:0000002\tISS\t\tP\tABC transport system ATP-binding protein, putative\tLmjF19.0800\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1080\tCRK1\t\tGO:0007049\tGO_REF:0000002\tISO\tGeneDB:TcCLB.504181.40\tP\tcdc2-related kinase 1\tLmjF21.1080\tmRNA\ttaxon:347515\t20170303\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1390\tLmjF.21.1390\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb927.10.690\tP\tpalmitoyl acyltransferase 3, putative\tLmjF21.1390\tmRNA\ttaxon:347515\t20110620\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1400\tLmjF.21.1400\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb927.10.690\tP\tpalmitoyl acyltransferase 3, putative\tLmjF21.1400\tmRNA\ttaxon:347515\t20110620\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1350\tLmjF.22.1350\t\tGO:0006810\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3350\tP\tpalmitoyl acyltransferase 11, putative\tLmjF22.1350\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1350\tLmjF.22.1350\t\tGO:0006810\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3350\tP\tpalmitoyl acyltransferase 11, putative\tLmjF22.1350\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0250\tMRPA\t\tGO:0043229\tPMID:11306588\tIDA\t\tC\tABC-thiol transporter\tABCC3|LmjF23.0250|PGPA\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0007093\tPMID:30380080\tIMP\t\tP\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20190701\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1420\tLmjF.23.1420\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb927.8.3400\tP\tpalmitoyl acyltransferase 12, putative\tLmjF23.1420\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0530\tABCT\t\tGO:0006810\tGO_REF:0000024\tISS\tPfam:PF00005|UniProtKB:Q9JI39\tP\tABC transporter, mitochondrial, putative\tLmjF25.0530\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0960\tTUBG\t\tGO:0016049\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.910\tP\ttubulin gamma chain\tLmjF25.0960\tmRNA\ttaxon:347515\t20141210\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1120\tALDH2\t\tGO:0046164\tPMID:7630384|PMID:19497128\tISO\tGeneDB:LtaP25.1180\tP\taldehyde dehydrogenase, mitochondrial precursor\tLmjF25.1120\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2280\tLmjF.25.2280\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb927.3.2400\tP\tpalmitoyl acyltransferase 10, putative\tLmjF25.2280\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0220\tLmjF.28.0220\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb11.02.5260\tP\tpalmitoyl acyltransferase 9, putative\tLmjF28.0220\tmRNA\ttaxon:347515\t20110725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1890\tLmjF.28.1890\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb11.01.0810\tP\tpalmitoyl acyltransferase 4, putative\tLmjF28.1890\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0510\tLmjF.29.0510\t\tGO:0046907\tPMID:20460437\tISO\tGeneDB:LinJ.29.0520\tP\tADF/Cofilin\tLmjF29.0510\tmRNA\ttaxon:347515\t20100720\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0820\tCPC\t\tGO:0008219\tPMID:21364675\tIMP\t\tP\tCPC cysteine peptidase, Clan CA, family C1, Cathepsin B-like\tLmjF29.0820\tmRNA\ttaxon:347515\t20110509\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0780\tLmjF.30.0780\t\tGO:0032774\tPMID:19228586|GO_REF:0000024\tISO\tGeneDB:Tb927.6.2230\tP\tmitochondrial oligo_U binding protein TBRGG1, putative\tLmjF30.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0540\tGAT1\t\tGO:0005215\tPMID:16754359|GO_REF:0000024\tISO\tGeneDB:Tb927.4.4050\tF\tglycosomal transporter (GAT1), putative\tLmjF31.0540\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0390\tRpn8\t\tGO:0016049\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14530\tP\t19S proteasome non-atpase subunit 8\tLmjF32.0390\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1960\tLmjF.32.1960\t\tGO:0008152\tGO_REF:0000002\tISS\t\tP\t1-acyl-sn-glycerol-3-phosphateacyltransferase-like protein, putative\tLmjF32.1960\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3010\tLmjF.32.3010\t\tGO:0000910\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.17000\tP\tleucine-rich repeat protein, putative\tLmjF32.3010\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0230\tLmjF.33.0230\t\tGO:0006810\tPMID:19240115\tISO\tGeneDB:Tb927.10.10800\tP\tpalmitoyl acyltransferase 2, putative\tLmjF33.0230\tmRNA\ttaxon:347515\t20110620\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms", "obj": "", "taxon": "", "rule": 8 }, { "level": "WARNING", "line": 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hydrolase\tLmjF18.1580\tmRNA\ttaxon:347515\t20091020\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1580\tNH\t\tGO:0043101\tPMID:10409664|PMID:11738828\tIDA\t\tP\tnonspecific nucleoside hydrolase\tLmjF18.1580\tmRNA\ttaxon:347515\t20091020\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1580\tNH\t\tGO:0045437\tPMID:10409664|PMID:11738828|PMID:19497128\tIDA\t\tF\tnonspecific nucleoside hydrolase\tLmjF18.1580\tmRNA\ttaxon:347515\t20091020\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1580\tNH\t\tGO:0047724\tPMID:10409664|PMID:11738828|PMID:19497128\tIDA\t\tF\tnonspecific nucleoside hydrolase\tLmjF18.1580\tmRNA\ttaxon:347515\t20091020\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1580\tNH\t\tGO:0050263\tPMID:10409664|PMID:11738828|PMID:19497128\tIDA\t\tF\tnonspecific nucleoside hydrolase\tLmjF18.1580\tmRNA\ttaxon:347515\t20091020\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0840\tLmjF.20.0840\t\tGO:0005739\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.1.1580|UniProtKB:SCO2_HUMAN\tC\tcytochrome c oxidase assembly factor, putative\tLmjF20.0840\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0845\tHGPRT\t\tGO:0020015\tPMID:9430693|PMID:19497128\tEXP\t\tC\thypoxanthine-guanine phosphoribosyltransferase\tLmjF21.0845\tmRNA\ttaxon:347515\t20090803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0845\tHGPRT\t\tGO:0043101\tPMID:8577321|PMID:19497128\tEXP\t\tP\thypoxanthine-guanine phosphoribosyltransferase\tLmjF21.0845\tmRNA\ttaxon:347515\t20090803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0000310\tPMID:10567419|PMID:19497128\tIDA\t\tF\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20090803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0004422\tPMID:10567419|PMID:19497128\tIDA\t\tF\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20090803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0020015\tPMID:14747142|PMID:19497128\tEXP\t\tC\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20090803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0043101\tPMID:10567419|PMID:19497128\tEXP\t\tP\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20090803\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0110\tGDPMP\t\tGO:0009298\tPMID:11447107|PMID:19497128\tIMP\t\tP\tGDP-mannose pyrophosphorylase\tEXGMP|LmjF23.0110\tmRNA\ttaxon:347515\t20090925\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0290\tHUS1\t\tGO:0005634\tPMID:21291918|PMID:24118609\tIDA\t\tC\tCheckpoint protein HUS1\tLmjF23.0290\tmRNA\ttaxon:347515\t20160802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0680\tLmjF.24.0680\t\tGO:0005365\tPMID:7565702|PMID:8663013|PMID:19497128\tIDA\t\tF\tmyo-inositol/proton symporter (MIT)\tLmjF24.0680\tmRNA\ttaxon:347515\t20090728\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0680\tLmjF.24.0680\t\tGO:0015798\tPMID:7565702|PMID:8663013|PMID:19497128\tIDA\t\tP\tmyo-inositol/proton symporter (MIT)\tLmjF24.0680\tmRNA\ttaxon:347515\t20090728\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1120\tALDH2\t\tGO:0004029\tPMID:7630384|PMID:19497128\tISO\tGeneDB:LtaP25.1180\tF\taldehyde dehydrogenase, mitochondrial precursor\tLmjF25.1120\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1120\tALDH2\t\tGO:0046164\tPMID:7630384|PMID:19497128\tISO\tGeneDB:LtaP25.1180\tP\taldehyde dehydrogenase, mitochondrial precursor\tLmjF25.1120\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1770\tEnCR\t\tGO:0009922\tPMID:16923389|PMID:19497128\tRCA\t\tF\tenoyl-CoA reductase, putative\tLmjF25.1770\tmRNA\ttaxon:347515\t20100113\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0140\tAPRT\t\tGO:0003999\tPMID:8719249|PMID:19497128\tIGI\t\tF\tadenine phosphoribosyltransferase\tAPRTase|LmjF26.0140\tmRNA\ttaxon:347515\t20090728\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0140\tAPRT\t\tGO:0005829\tPMID:14747142|PMID:19497128\tEXP\t\tC\tadenine phosphoribosyltransferase\tAPRTase|LmjF26.0140\tmRNA\ttaxon:347515\t20090728\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1620\tEIF4E1\t\tGO:0000340\tPMID:15388875|PMID:15694484\tIDA\t\tF\tEukaryotic translation initiation factor 4E-1\tLmjF27.1620\tmRNA\ttaxon:347515\t20160127\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1620\tEIF4E1\t\tGO:0005737\tPMID:17041189|PMID:15388875\tIDA\t\tC\tEukaryotic translation initiation factor 4E-1\tLmjF27.1620\tmRNA\ttaxon:347515\t20160127\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0005634\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.3.4810|UniProtKB:SLD5_MOUSE\tC\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0005737\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.3.4810|UniProtKB:SLD5_MOUSE\tC\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0120\tADS1\t\tGO:0008609\tPMID:12944391|PMID:19497128|GO_REF:0000024\tISO\tGeneDB:Tb927.6.1500\tF\talkyldihydroxyacetonephosphate synthase\tLmjF30.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0060170\tPMID:17640270|PMID:26259900\tIMP\t\tC\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20160729\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1660\tLmjF.31.1660\t\tGO:0006270\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.4.4680|UniProtKB:PSF3_SCHPO\tP\tGINS complex subunit Psf3, putative\tLmjF31.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0240\tTDR1\t\tGO:0045174\tPMID:15056070|PMID:19497128\tIDA\t\tF\tthiol-dependent reductase 1\tLmjF33.0240\tmRNA\ttaxon:347515\t20090925\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0240\tTDR1\t\tGO:0070402\tPMID:15056070|PMID:19497128\tIDA\t\tF\tthiol-dependent reductase 1\tLmjF33.0240\tmRNA\ttaxon:347515\t20090925\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0360\tRPC1\t\tGO:0005634\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.10.2780|UniProtKB:P08968\tC\tDNA-directed RNA polymerase III subunit C1, putative\tLmjF34.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1090\tDAT\t\tGO:0008611\tPMID:16423830|PMID:19497128\tIDA\t\tP\tdihydroxyacetonephosphate acyltransferase\tLmjF34.1090\tmRNA\ttaxon:347515\t20090930\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3980\t4E-IP\t\tGO:0005737\tPMID:21764780|PMID:17041189|GO_REF:0000024\tISO\tGeneDB:Tb927.9.11050|GO:0005515\tC\t4E-interacting protein, putative\tLmjF35.3980\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4990\tSLS3\t\tGO:0005794\tPMID:16861742|PMID:19497128\tEXP\t\tC\tsphingomyelin/ceramide phosphorylethanolamine synthase, bifunctional\tLmjF35.4990|ESP19\tmRNA\ttaxon:347515\t20090728\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0220\tDPMS\t\tGO:0004582\tPMID:10329621|PMID:19497128\tIDA\t\tF\tdolicholphosphate-mannose synthase\tLmjF36.0220\tmRNA\ttaxon:347515\t20090930\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0220\tDPMS\t\tGO:0006506\tPMID:10329621|PMID:11689705\tIDA\t\tP\tdolicholphosphate-mannose synthase\tLmjF36.0220\tmRNA\ttaxon:347515\t20090930\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000055: References should have only one ID per ID space", "obj": "", "taxon": "", "rule": 55 } ], "gorule-0000058": [], "gorule-0000061": [ { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0960\tLmjF.03.0960\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2880\tC\thypothetical protein, conserved\tLmjF03.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0520\tLmjF.04.0520\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 1, putative\tLmjF04.0520\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0500\tATPF1A\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7420\tC\tATP synthase F1, alpha subunit, putative\tLmjF05.0500\tmRNA\ttaxon:347515\t20150713\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0510\tATPF1A\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7420\tC\tATP synthase F1, alpha subunit, putative\tLmjF05.0510\tmRNA\ttaxon:347515\t20150713\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0040\tGPI12\t\tGO:0016021\tPMID:12364327\tEXP\t\tC\tN-acetyl-D-acetylglucosaminylphosphatidylinositol deacetylase\tLmjF09.0040\tmRNA\ttaxon:347515\t20090506\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0640\tLmjF.09.0640\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 5, putative\tLmjF09.0640\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0016021\tGO_REF:0000024\tISO\tGeneDB:LinJ.10.0760\tC\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20110223\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0016021\tGO_REF:0000024\tISO\tGeneDB:LinJ.10.0760\tC\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20110223\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0016021\tGO_REF:0000024\tISO\tGeneDB:LinJ.10.0760\tC\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20110223\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1160\tRABX1\t\tGO:0016021\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4610\tC\tRas-related protein RabX1, putative\tLmjF10.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1030\tLmjF.11.1030\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6250\tC\thypothetical protein, conserved\tLmjF11.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1080\tLmjF.11.1080\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 7, putative\tLmjF11.1080\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1090\tLmjF.11.1090\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 7, putative\tLmjF11.1090\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0670\tCOXIV\t\tGO:0005751\tPMID:12467979\tISO\tGeneDB:LtaP12.0690\tC\tcytochrome oxidase subunit IV, putative\tLmjF12.0670\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0420\tLmjF.13.0420\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4490\tC\tlong-chain-fatty-acid-CoA ligase, putative\tLmjF13.0420\tmRNA\ttaxon:347515\t20141203\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0650\tPAT6\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 6, putative\tLmjF13.0650\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0800\tABCF2\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tABC transport system ATP-binding protein, putative\tLmjF19.0800\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1250\tPEX12\t\tGO:0016021\tPMID:17188680|GO_REF:0000024\tISO\tGeneDB:Tb927.10.15850\tC\tperoxin 12, putative\tLmjF19.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0120\tLmjF.20.0120\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.730\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF20.0120\tmRNA\ttaxon:347515\t20140725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0420\tLmjF.21.0420\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2230\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\tLmjF21.0420\tmRNA\ttaxon:347515\t20141016\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0740\tLmjF.21.0740\t\tGO:0000276\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1570\tC\tATPase subunit 9, putative\tLmjF21.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1390\tLmjF.21.1390\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 3, putative\tLmjF21.1390\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1400\tLmjF.21.1400\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 3, putative\tLmjF21.1400\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1770\tATPF1G\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.180\tC\tATP synthase F1 subunit gamma protein, putative\tLmjF21.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1360\tLmjF.23.1360\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3320\tC\thypothetical protein, conserved\tLmjF23.1360\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1420\tLmjF.23.1420\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 12, putative\tLmjF23.1420\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0630\tLmjF.24.0630\t\tGO:0000276\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5280\tC\tATPase subunit 9, putative\tLmjF24.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1630\tSDH1\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511909.40\tC\tSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial\tLmjF24.1630\tmRNA\ttaxon:347515\t20150713\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0310\tLmjF.25.0310\t\tGO:0000784\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.370\tC\thypothetical protein, conserved\tLmjF25.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0530\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tLmjF25.0530\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0590\tLmjF.25.0590\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.600\tC\thypothetical protein, conserved\tLmjF25.0590\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1170\tATPB\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1170\tmRNA\ttaxon:347515\t20141208\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1180\tATPB\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1180\tmRNA\ttaxon:347515\t20141208\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1620\tLmjF.25.1620\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1690\tC\thypothetical protein, conserved\tLmjF25.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2090\tLmjF.25.2090\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2180\tC\thypothetical protein, conserved\tLmjF25.2090\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2280\tLmjF.25.2280\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 10, putative\tLmjF25.2280\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0460\tLmjF.26.0460\t\tGO:0000276\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1470\tC\tATPase subunit 9, putative\tLmjF26.0460\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1100\tLmjF.26.1100\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.840\tC\thypothetical protein, conserved\tLmjF26.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0290\tACP\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.860\tC\tacyl carrier protein, mitochondrial, putative\tLmjF27.0290|NDUFAB1\tmRNA\ttaxon:347515\t20141210\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0650\tLmjF.27.0650\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1270\tC\thypothetical protein, conserved\tLmjF27.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1560\tLmjF.27.1560\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tdiacylglycerol acyltransferase, putative\tLmjF27.1560\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1590\tLmjF.27.1590\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tdiacylglycerol acyltransferase, putative\tLmjF27.1590\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0220\tLmjF.28.0220\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 9, putative\tLmjF28.0220\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1820\tRPA1\t\tGO:0000784\tGO_REF:0000024\tISO\tUniProtKB:Q5MY89\tC\tReplication factor A protein 1\tLmjF28.1820\tmRNA\ttaxon:347515\t20160802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1890\tLmjF.28.1890\t\tGO:0016021\tPMID:11152613\tISO\tGeneDB:Tb11.01.0810\tC\tpalmitoyl acyltransferase 4, putative\tLmjF28.1890\tmRNA\ttaxon:347515\t20110713\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2000\tLDK\t\tGO:0016021\tPMID:20833891|GO_REF:0000024\tISO\tGeneDB:Tb927.11.8940|GeneDB:Tb11.01.0670\tC\tprotein lipid droplet kinase (LDK)\tLmjF28.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0005747\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tC\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0690\tLmjF.29.0690\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3660\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF29.0690\tmRNA\ttaxon:347515\t20141219\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0850\tTDP1\t\tGO:1902377\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3490\tC\tTrypanosome DNA binding protein 1\tLmjF29.0850|HMGB\tmRNA\ttaxon:347515\t20160802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0920\tLmjF.29.0920\t\tGO:0016021\tPMID:19797662\tISO\tGeneDB:TcCLB.507951.270\tC\tLETM1 and EF-hand domain-containing protein 1, putative\tLmjF29.0920\tmRNA\ttaxon:347515\t20120524\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1040\tSDH7\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.509053.140\tC\tsuccinate dehydrogenase subunit 7\tLmjF30.1040\tmRNA\ttaxon:347515\t20170511\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2845\tSDH3\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511523.14\tC\tsuccinate dehydrogenase subunit 3\tLmjF30.2845\tmRNA\ttaxon:347515\t20170511\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3600\tLmjF.30.3600\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4990\tC\tATP synthase, epsilon chain, putative\tLmjF30.3600\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1660\tLmjF.31.1660\t\tGO:0000790\tGO_REF:0000012\tISA\tUniProtKB:PSF3_SCHPO\tC\tGINS complex subunit Psf3, putative\tLmjF31.1660\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1960\tLmjF.32.1960\t\tGO:0016021\tPMID:11152613\tISS\t\tC\t1-acyl-sn-glycerol-3-phosphateacyltransferase-like protein, putative\tLmjF32.1960\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2210\tTAP151\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF32.2210\tmRNA\ttaxon:347515\t20141210\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2560\tTTA1\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tGPI transamidase component Tta1, putative\tLmjF32.2560\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3960\tLmjF.32.3960\t\tGO:0005750\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16220\tC\thypothetical protein, conserved\tLmjF32.3960\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0230\tLmjF.33.0230\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 2, putative\tLmjF33.0230\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1860\tABCD3\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tglycosomal transporter (GAT2), putative\tLmjF33.1860\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2800\tLmjF.33.2800\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3610\tC\thypothetical protein, conserved\tLmjF33.2800\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0910\tLmjF.34.0910\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3450\tC\thypothetical protein, conserved\tLmjF34.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9NIV1\tC\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3850\tLmjF.34.3850\t\tGO:0016021\tPMID:11152613\tISS\t\tC\taquaporin 2, putative\tLmjF34.3850\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4320\tLmjF.34.4320\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4320\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4350\tLmjF.34.4350\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4350\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4380\tLmjF.34.4380\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4380\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4410\tLmjF.34.4410\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4410\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4440\tLmjF.34.4440\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4440\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4470\tLmjF.34.4470\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4470\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4500\tLmjF.34.4500\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4500\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0100\tLmjF.35.0100\t\tGO:0005750\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4280\tC\tubiquinol-cytochrome c reductase complex 14kD subunit, putative\tLmjF35.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0620\tLmjF.36.0620\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5050\tC\thypothetical protein, conserved\tLmjF36.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3520\tLmjF.36.3520\t\tGO:0005747\tPMID:21610103|GO_REF:0000024\tISO\tGeneDB:Tb927.11.9930\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF36.3520\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4180\tLmjF.36.4180\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tUDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative\tLmjF36.4180\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002432, RO:0002325, RO:0001025. Repaired to RO:0001025", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4460\tLmjF.36.4460\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9830\tC\thypothetical protein, conserved\tLmjF36.4460\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6760\tLmjF.36.6760\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8030\tC\tATP synthase delta (OSCP) subunit, putative\tLmjF36.6760\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050", "obj": "", "taxon": "", "rule": 61 } ], "gorule-0000063": [ { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0520\tLmjF.04.0520\t\tGO:0006810\tPMID:19240115\tISS\t\tP\tpalmitoyl acyltransferase 1, putative\tLmjF04.0520\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0520\tLmjF.04.0520\t\tGO:0006897\tPMID:19240115\tISS\t\tP\tpalmitoyl acyltransferase 1, putative\tLmjF04.0520\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0520\tLmjF.04.0520\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 1, putative\tLmjF04.0520\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0310\tLmjF.05.0310\t\tGO:0003756\tGO_REF:0000002\tISS\t\tF\tmonothiol glutaredoxin, putative\tLmjF05.0310\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0310\tLmjF.05.0310\t\tGO:0005739\tPMID:15223320\tISS\t\tC\tmonothiol glutaredoxin, putative\tLmjF05.0310\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0110\tLmjF.07.0110\t\tGO:0005509\tGO_REF:0000002\tISS\t\tF\tmitochondrial calcium uptake 1, putative\tLmjF07.0110\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0200\tpgps\t\tGO:0016020\tPMID:11152613\tISS\t\tC\tphosphatidylglycerolphosphate synthase, mitochondrial, putative\tLmjF07.0200\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1020\tLmjF.07.1020\t\tGO:0000723\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF7, putative\tLmjF07.1020\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1020\tLmjF.07.1020\t\tGO:0006310\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF7, putative\tLmjF07.1020\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1020\tLmjF.07.1020\t\tGO:0051276\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF7, putative\tLmjF07.1020\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO 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column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2010\tLmjF.24.2010\t\tGO:0005942\tGO_REF:0000002\tISS\t\tC\tphosphatidylinositol 3-kinase, putative\tLmjF24.2010\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2010\tLmjF.24.2010\t\tGO:0016773\tGO_REF:0000002\tISS\t\tF\tphosphatidylinositol 3-kinase, putative\tLmjF24.2010\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1770\tEnCR\t\tGO:0019408\tPMID:20637498\tISS\t\tP\tenoyl-CoA reductase, putative\tLmjF25.1770\tmRNA\ttaxon:347515\t20100922\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2280\tLmjF.25.2280\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 10, putative\tLmjF25.2280\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2480\tLmjF.26.2480\t\tGO:0008526\tGO_REF:0000002\tISS\t\tF\tCDP-diacylglycerol--inositol 3-phosphatidyltransferase, putative\tLmjF26.2480\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1560\tLmjF.27.1560\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tdiacylglycerol acyltransferase, putative\tLmjF27.1560\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1590\tLmjF.27.1590\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tdiacylglycerol acyltransferase, putative\tLmjF27.1590\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1750\tLmjF.27.1750\t\tGO:0003777\tGO_REF:0000002\tISS\t\tF\tCytoplasmic dynein 2 heavy chain (DYNC2H1), putative\tLmjF27.1750\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1750\tLmjF.27.1750\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\tCytoplasmic dynein 2 heavy chain (DYNC2H1), putative\tLmjF27.1750\tmRNA\ttaxon:347515\t20091113\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1750\tLmjF.27.1750\t\tGO:0016887\tGO_REF:0000002\tISS\t\tF\tCytoplasmic dynein 2 heavy chain (DYNC2H1), putative\tLmjF27.1750\tmRNA\ttaxon:347515\t20091113\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0220\tLmjF.28.0220\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 9, putative\tLmjF28.0220\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0003954\tPMID:18534909\tISS\t\tF\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0006735\tPMID:18534909\tISS\t\tP\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0008137\tPMID:18534909\tISS\t\tF\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0031966\tPMID:18534909\tISS\t\tC\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2530\tLmjF.28.2530\t\tGO:0000723\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF3, putative\tLmjF28.2530\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2530\tLmjF.28.2530\t\tGO:0006310\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF3, putative\tLmjF28.2530\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2530\tLmjF.28.2530\t\tGO:0051276\tGO_REF:0000002\tISS\t\tP\tDNA repair and recombination helicase protein PIF3, putative\tLmjF28.2530\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0370\tMPK12\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\tmitogen-activated protein kinase 12, putative\tLmjF30.0370\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0370\tMPK12\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\tmitogen-activated protein kinase 12, putative\tLmjF30.0370\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2080\tYCF45\t\tGO:0009292\tPMID:17826337\tISS\t\tP\thypothetical protein, conserved\tLmjF30.2080\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2860\tLmjF.31.2860\t\tGO:0004674\tGO_REF:0000002\tISS\t\tF\ttousled-like kinase II, putative\tLmjF31.2860\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2860\tLmjF.31.2860\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\ttousled-like kinase II, putative\tLmjF31.2860\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2860\tLmjF.31.2860\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\ttousled-like kinase II, putative\tLmjF31.2860\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1750\tPUF7\t\tGO:0016071\tGO_REF:0000002\tISS\t\tP\tpumilio/PUF RNA binding protein 7, putative\tLmjF32.1750\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1960\tLmjF.32.1960\t\tGO:0008152\tGO_REF:0000002\tISS\t\tP\t1-acyl-sn-glycerol-3-phosphateacyltransferase-like protein, putative\tLmjF32.1960\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1960\tLmjF.32.1960\t\tGO:0016021\tPMID:11152613\tISS\t\tC\t1-acyl-sn-glycerol-3-phosphateacyltransferase-like protein, putative\tLmjF32.1960\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2560\tTTA1\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tGPI transamidase component Tta1, putative\tLmjF32.2560\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3170\tLmjF.32.3170\t\tGO:0006120\tPMID:18534909\tISS\t\tP\tNADH dehydrogenase subunit NI8M, putative\tLmjF32.3170\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0230\tLmjF.33.0230\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 2, putative\tLmjF33.0230\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1860\tABCD3\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tglycosomal transporter (GAT2), putative\tLmjF33.1860\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3850\tLmjF.34.3850\t\tGO:0016021\tPMID:11152613\tISS\t\tC\taquaporin 2, putative\tLmjF34.3850\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1540\tRISP\t\tGO:0008121\tGO_REF:0000002\tISS\t\tF\trieske iron-sulfur protein, mitochondrial precursor, putative\tLmjF35.1540\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3020\tLmjF.35.3020\t\tGO:0005576\tPMID:15223320\tISS\t\tC\tphospholipase A1, putative\tLmjF35.3020\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3870\tLmjF.35.3870\t\tGO:0004550\tGO_REF:0000002\tISS\t\tF\tnucleoside diphosphate kinase, putative\tLmjF35.3870\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3870\tLmjF.35.3870\t\tGO:0005524\tGO_REF:0000002\tISS\t\tF\tnucleoside diphosphate kinase, putative\tLmjF35.3870\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3870\tLmjF.35.3870\t\tGO:0006183\tGO_REF:0000002\tISS\t\tP\tnucleoside diphosphate kinase, putative\tLmjF35.3870\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3870\tLmjF.35.3870\t\tGO:0006228\tGO_REF:0000002\tISS\t\tP\tnucleoside diphosphate kinase, putative\tLmjF35.3870\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3870\tLmjF.35.3870\t\tGO:0006241\tGO_REF:0000002\tISS\t\tP\tnucleoside diphosphate kinase, putative\tLmjF35.3870\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4910\tLmjF.35.4910\t\tGO:0006270\tGO_REF:0000002\tISS\t\tP\tDNA replication licensing factor MCM9, putative\tLmjF35.4910\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' 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"TriTrypDB\tLmjF.36.4180\tLmjF.36.4180\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tUDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative\tLmjF36.4180\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)", "obj": "", "taxon": "", "rule": 63 } ], "gorule-0000064": [], "gorule-0000065": [ { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0420\tLmjF.03.0420\t\tGO:0006470\tPMID:20551176\tISO\tGeneDB:Tb927.10.3360\tP\tPTP1-interacting protein, 39 kDa, putative\tLmjF03.0420\tmRNA\ttaxon:347515\t20110105\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0520\tLmjF.04.0520\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb09.160.5650\tP\tpalmitoyl 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"", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0870\tPRMT7\t\tGO:0035246\tPMID:25294169\tIMP\t\tP\targinine N-methyltransferase, type III, putative\tLmjF06.0870\tmRNA\ttaxon:347515\t20160125\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0640\tLmjF.09.0640\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb11.01.4490\tP\tpalmitoyl acyltransferase 5, putative\tLmjF09.0640\tmRNA\ttaxon:347515\t20110725\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0830\tLmjF.10.0830\t\tGO:0006468\tGO_REF:0000002\tISS\tPANTHER:PTHR23257|Prosite:PS00108\tP\tserine/threonine-protein kinase, 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"", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0370\tMPK12\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\tmitogen-activated protein kinase 12, putative\tLmjF30.0370\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2860\tLmjF.31.2860\t\tGO:0006468\tGO_REF:0000002\tISS\t\tP\ttousled-like kinase II, putative\tLmjF31.2860\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0230\tLmjF.33.0230\t\tGO:0018345\tPMID:21193548\tISO\tGeneDB:Tb927.10.10800\tP\tpalmitoyl acyltransferase 2, putative\tLmjF33.0230\tmRNA\ttaxon:347515\t20110620\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0940\tWEE1\t\tGO:0038083\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3420\tP\tWee1-like protein kinase, putative\tLmjF34.0940\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0940\tWEE1\t\tGO:0045736\tGO_REF:0000002\tISS\tUniProtKB:WEE2_MOUSE\tP\tWee1-like protein kinase, putative\tLmjF34.0940\tmRNA\ttaxon:347515\t20131122\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0940\tWEE1\t\tGO:0046777\tGO_REF:0000002\tISO\tGeneDB:Tb927.4.3420\tP\tWee1-like protein kinase, putative\tLmjF34.0940\tmRNA\ttaxon:347515\t20131122\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1250\tLmjF.34.1250\t\tGO:0006470\tPMID:20551176\tISO\tGeneDB:Tb09.160.4460\tP\tPTP1-interacting protein, 39 kDa, putative\tLmjF34.1250\tmRNA\ttaxon:347515\t20110105\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0006468\tGO_REF:0000011\tISM\tInterPro:IPR000719\tP\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Violates 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"level": "WARNING", "line": "TriTrypDB\tLmjF.34.2190\tLmjF.34.2190\t\tGO:0006470\tGO_REF:0000011\tISM\tInterPro:IPR000340\tP\tkinatase, putative\tLmjF34.2190\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1730\tCK2A1\t\tGO:0006468\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14430\tP\tcasein kinase II, putative\tLmjF35.1730\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed", "obj": "", "taxon": "", "rule": 65 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0550\tCRK3\t\tGO:0006468\tGO_REF:0000002\tISO\tGeneDB:TcCLB.506583.40\tP\tcdc2-related kinase 3\tLmjF36.0550\tmRNA\ttaxon:347515\t20170303\tGeneDB\n", "type": "Violates GO Rule", "message": "GORULE:0000065: 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"type": "Violates GO Rule", "message": "GORULE:0000013: Taxon-appropriate annotation check", "obj": "", "taxon": "", "rule": 13 } ], "gorule-0000020": [ { "level": "ERROR", "line": "TriTrypDB\tLmjF.26.0930\tLmjF.26.0930\t\tGO:0000002\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1000\tP\thypothetical protein, conserved\tLmjF26.0930\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0000002", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.36.2660\tLmjF.36.2660\t\tGO:0000002\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.7570\tP\tdihydrolipoamide acetyltransferase precursor, putative\tLmjF36.2660\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0000002", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": 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"level": "ERROR", "line": "TriTrypDB\tLmjF.35.5040\tPABP1\t\tGO:0006378\tPMID:10666465\tIDA\t\tP\tpolyadenylate-binding protein 1\tLmjF35.5040\tmRNA\ttaxon:347515\t20101103\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006378", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.28.1280\tPAH\t\tGO:0006558\tPMID:20887755\tIMP\t\tP\tphenylalanine-4-hydroxylase\tLmjF28.1280\tmRNA\ttaxon:347515\t20101014\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0006558", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.16.0030\tPRMT6\t\tGO:0008469\tPMID:20418380|GO_REF:0000024\tISO\tGeneDB:Tb927.5.3960\tF\targinine N-methyltransferase, type I\tLmjF16.0030\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0008469", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.21.1450\tPRMT5\t\tGO:0008469\tPMID:17601874|GO_REF:0000024\tISO\tGeneDB:Tb927.10.640\tF\targinine N-methyltransferase, type II, putative\tLmjF21.1450\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0008469", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.04.0960\tADKG\t\tGO:0009041\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8450\tF\tadenylate kinase, putative\tLmjF04.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0009041", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.31.2970\tACC\t\tGO:0009343\tGO_REF:0000011\tISM\tInterPro:IPR000022\tC\tacetyl-CoA carboxylase\tLmjF31.2970\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0009343", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.36.2980\tBDF2\t\tGO:0016570\tGO_REF:0000002\tISO\tGeneDB:TcCLB.506553.20\tP\tbromodomain factor 2 protein, putative\tLmjF36.2980\tmRNA\ttaxon:347515\t20110502\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016570", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.16.0240\tLmjF.16.0240\t\tGO:0016573\tPMID:21357738\tISO\tGeneDB:Tb927.8.5770\tP\tElongator-like Protein 3a, putative\tLmjF16.0240\tmRNA\ttaxon:347515\t20120409\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016573", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.28.2270\tLmjF.28.2270\t\tGO:0016573\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11530\tP\thistone acetyltransferase, putative\tLmjF28.2270\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0016573", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.20.0030\tDOT1B\t\tGO:0018024\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.570\tF\tHistone-lysine N-methyltransferase, H3 lysine-76 specific\tLmjF20.0030\tmRNA\ttaxon:347515\t20090717\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0018024", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.35.3230\tLmjF.35.3230\t\tGO:0019510\tPMID:17196271\tTAS\t\tP\tcystathione gamma lyase, putative\tLmjF35.3230\tmRNA\ttaxon:347515\t20091229\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0019510", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.09.0910\tLmjF.09.0910\t\tGO:0019861\tGO_REF:0000002\tIEA\t\tC\tcalmodulin, putative\tLmjF09.0910\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0019861", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.09.0920\tLmjF.09.0920\t\tGO:0019861\tGO_REF:0000002\tIEA\t\tC\tcalmodulin, putative\tLmjF09.0920\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0019861", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.09.0930\tLmjF.09.0930\t\tGO:0019861\tGO_REF:0000002\tIEA\t\tC\tcalmodulin, putative\tLmjF09.0930\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0019861", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.36.1060\tNLP\t\tGO:0031935\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5450\tP\tISWI complex protein\tLmjF36.1060\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0031935", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.20.0050\tASF1A\t\tGO:0031936\tGO_REF:0000024\tISA\tUniProtKB:Q9Y294\tP\tAnti-silencing function protein 1 homolog A\tLmjF20.0050\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0031936", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.21.0680\tLmjF.21.0680\t\tGO:0031936\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1680\tP\thistone deacetylase, putative\tLmjF21.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0031936", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.06.1100\tpATOM36\t\tGO:0033955\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5700\tP\tperipherally associated ATOM36\tLmjF06.1100\tmRNA\ttaxon:347515\t20160725\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.27.1760\ttbccd1\t\tGO:0033955\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.2440\tP\tTubulin cofactor C domain-containing protein 1, putative\tLmjF27.1760\tmRNA\ttaxon:347515\t20140414\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.35.1080\tTAC65\t\tGO:0033955\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.830\tP\tTripartite attachment complex protein 65\tLmjF35.1080\tmRNA\ttaxon:347515\t20160725\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.36.1640\tUMSBP\t\tGO:0033955\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6060\tP\tuniversal minicircle sequence binding protein, putative\tLmjF36.1640\tmRNA\ttaxon:347515\t20141124\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.36.3990\tHsIV\t\tGO:0033955\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10240\tP\thslVU complex proteolytic subunit, threonine peptidase, Clan T(1), family T1B\tLmjF36.3990\tmRNA\ttaxon:347515\t20141126\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0033955", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.06.0870\tPRMT7\t\tGO:0034969\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5490\tP\targinine N-methyltransferase, type III, putative\tLmjF06.0870\tmRNA\ttaxon:347515\t20100521\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0034969", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.16.0030\tPRMT6\t\tGO:0034969\tPMID:20418380|GO_REF:0000024\tISO\tGeneDB:Tb927.5.3960\tP\targinine N-methyltransferase, type I\tLmjF16.0030\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0034969", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.18.0900\tLmjF.18.0900\t\tGO:0035268\tPMID:14973778\tIC\t\tP\tdolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase, putative\tLmjF18.0900\tmRNA\ttaxon:347515\t20100823\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0035268", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.19.0800\tABCF2\t\tGO:0042624\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.15530\tF\tABC transport system ATP-binding protein, putative\tLmjF19.0800\tmRNA\ttaxon:347515\t20120807\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0042624", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.29.2600\tPAP\t\tGO:0043629\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3160\tP\tpoly(A) polymerase, putative\tLmjF29.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043629", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.21.1620\tLmjF.21.1620\t\tGO:0043631\tPMID:18951088|GO_REF:0000024\tISO\tGeneDB:Tb927.10.380\tP\tmitochondrial RNA binding complex 1 subunit, putative\tLmjF21.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.27.0630\tLmjF.27.0630\t\tGO:0043631\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.1250\tP\tMitochondrial SSU ribosomal protein, putative\tLmjF27.0630\tmRNA\ttaxon:347515\t20120912\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.28.0040\tLmjF.28.0040\t\tGO:0043631\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7218\tP\thypothetical protein, conserved\tLmjF28.0040\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.32.2670\tLmjF.32.2670\t\tGO:0043631\tPMID:22396527|GO_REF:0000024\tISO\tGeneDB:Tb927.11.15850\tP\tkinteoplast poly(A) polymerase complex 1 subunit, putative\tLmjF32.2670\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.33.2510\tLmjF.33.2510\t\tGO:0043631\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.2530\tP\tmitochondrial RNA binding complex 1 subunit\tLmjF33.2510\tmRNA\ttaxon:347515\t20120917\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.36.2310\tMRPS18\t\tGO:0043631\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6850\tP\tmitochondrial RNA binding complex 1 subunit\tLmjF36.2310\tmRNA\ttaxon:347515\t20120917\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043631", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.28.0520\tAIRK\t\tGO:0043987\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8220\tP\tAurora I-related kinase\tLmjF28.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043987", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.31.2860\tLmjF.31.2860\t\tGO:0043987\tPMID:17940067|GO_REF:0000024\tISO\tGeneDB:Tb927.4.5180|GeneDB:Tb927.8.7220\tP\ttousled-like kinase II, putative\tLmjF31.2860\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0043987", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0044008\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20140303\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0044008", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.29.2320\tMKK1\t\tGO:0044008\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4860\tP\tmitogen-activated protein kinase kinase 1\tLmjF29.2320\tmRNA\ttaxon:347515\t20151006\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0044008", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.10.0460\tGP63-1\t\tGO:0044081\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0460\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0044081", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.10.0465\tGP63-2\t\tGO:0044081\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0465\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0044081", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.10.0470\tGP63-3\t\tGO:0044081\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0470\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0044081", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.10.0480\tGP63-4\t\tGO:0044081\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0480\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0044081", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.28.1670\tZFK\t\tGO:0044131\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.9270\tP\tzinc finger protein kinase, putative\tLmjF28.1670\tmRNA\ttaxon:347515\t20140106\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0044131", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.05.0090\tNudix2\tNOT\tGO:0050072\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.4350\tF\tNudix hydrolase 2, putative\tLmjF05.0090\tmRNA\ttaxon:347515\t20150714\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0050072", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.36.0300\tNudix5\tNOT\tGO:0050072\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4680\tF\tMutt-Nudix-related hydrolase 5, putative\tLmjF36.0300\tmRNA\ttaxon:347515\t20150714\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0050072", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.36.3660\tNudix3\tNOT\tGO:0050072\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9810\tF\tNUDIX hydrolase 3, putative\tLmjF36.3660\tmRNA\ttaxon:347515\t20150714\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0050072", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.34.0330\tDHS34\t\tGO:0050983\tPMID:19880510\tIDA\t\tP\tdeoxyhypusine synthase\tLmjF34.0330\tmRNA\ttaxon:347515\t20101116\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0050983", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.19.0360\tLmjF.19.0360\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15020\tP\tCMGC/DYRK protein kinase, putative\tLmjF19.0360\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.23.1140\tLmjF.23.1140\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2860\tP\thypothetical protein, conserved\tLmjF23.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.25.0230\tLmjF.25.0230\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.290\tP\tPhosphatase and tensin homolog, putative\tLmjF25.0230\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.25.0240\tLmjF.25.0240\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.300\tP\tpre-mRNA-splicing factor of RES complex, putative\tLmjF25.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.25.0740\tLmjF.25.0740\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.750\tP\tDNA repair protein, putative\tLmjF25.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.25.0750\tPP2C\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.760\tP\tprotein phosphatase 2C, putative\tLmjF25.0750\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.27.1040\tLmjF.27.1040\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1640\tP\thypothetical protein, conserved\tLmjF27.1040\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.28.2180\tLmjF.28.2180\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11470\tP\thypothetical protein, conserved\tLmjF28.2180\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.28.2210\tLmjF.28.2210\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11480\tP\tglycoprotein 96-92, putative\tLmjF28.2210\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.33.1470\tLmjF.33.1470\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12090\tP\tRNA-binding protein, putative\tLmjF33.1470\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.33.2650\tLmjF.33.2650\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4020\tP\thypothetical protein, conserved\tLmjF33.2650\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.34.0810\tLmjF.34.0810\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3620\tP\tserine/threonine-protein phosphatase PP1, putative\tLmjF34.0810\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.35.2310\tLmjF.35.2310\t\tGO:0052106\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13530\tP\thypothetical protein, conserved\tLmjF35.2310\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052106", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.15.0510\tISP2\t\tGO:0052190\tPMID:21098233\tIMP\t\tP\tecotin, putative\tLmjF15.0510\tmRNA\ttaxon:347515\t20110418\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052190", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.15.0520\tISP3\t\tGO:0052190\tPMID:19016791\tIMP\t\tP\tecotin, putative\tLmjF15.0520\tmRNA\ttaxon:347515\t20110418\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052190", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.14.0340\tLmjF.14.0340\t\tGO:0052746\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4400\tP\tinositol polyphosphate kinase-like protein, putative\tLmjF14.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052746", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.34.3700\tLmjF.34.3700\t\tGO:0052746\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1050\tP\tinositol-pentakisphosphate 2-kinase, putative\tLmjF34.3700\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052746", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.35.3140\tLmjF.35.3140\t\tGO:0052746\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12470\tP\tinositol polyphosphate kinase, putative\tLmjF35.3140\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0052746", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.01.0110\tLmjF.01.0110\t\tGO:0055114\tPMID:18669638\tISO\tGeneDB:Tb09.160.2210\tP\tmonothiol glutaredoxin, putative\tLmjF01.0110\tmRNA\ttaxon:347515\t20100715\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.05.0310\tLmjF.05.0310\t\tGO:0055114\tGO_REF:0000002\tISS\t\tP\tmonothiol glutaredoxin, putative\tLmjF05.0310\tmRNA\ttaxon:347515\t20100720\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.35.1250\tLmjF.35.1250\t\tGO:0055114\tPMID:18669638\tISO\tGeneDB:Tb927.5.950\tP\tmonothiol glutaredoxin, putative\tLmjF35.1250\tmRNA\ttaxon:347515\t20110607\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0055114", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.20.0050\tASF1A\t\tGO:0060968\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.630\tP\tAnti-silencing function protein 1 homolog A\tLmjF20.0050\tmRNA\ttaxon:347515\t20160727\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0060968", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.23.0110\tGDPMP\t\tGO:0070085\tPMID:11447107\tIMP\t\tP\tGDP-mannose pyrophosphorylase\tEXGMP|LmjF23.0110\tmRNA\ttaxon:347515\t20090925\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0070085", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.25.1770\tEnCR\t\tGO:0070085\tPMID:20637498\tISS\t\tP\tenoyl-CoA reductase, putative\tLmjF25.1770\tmRNA\ttaxon:347515\t20100922\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0070085", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0070537\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tP\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0070537", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.33.1330\tGlnAT\t\tGO:0070548\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.11970\tF\tglutamine aminotransferase, putative\tLmjF33.1330\tmRNA\ttaxon:347515\t20130524\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0070548", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.34.2420\tLmjF.34.2420\t\tGO:0097502\tGO_REF:0000012\tISA\tUniProtKB:ALG2_YEAST\tP\tdolichyl-P-Man:GDP-Man1GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF34.2420\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:0097502", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.35.1810\tDRC4\t\tGO:1904526\tGO_REF:0000012\tISA\tUniProtKB:Q60779\tP\ttrypanin-like protein\tLmjF35.1810|GAS8\tmRNA\ttaxon:347515\t20160719\tGeneDB\n", "type": "Obsolete class with no replacement", "message": "Violates GORULE:0000020", "obj": "GO:1904526", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0500\tATPF1A\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7420\tC\tATP synthase F1, alpha subunit, putative\tLmjF05.0500\tmRNA\ttaxon:347515\t20150713\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0510\tATPF1A\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7420\tC\tATP synthase F1, alpha subunit, putative\tLmjF05.0510\tmRNA\ttaxon:347515\t20150713\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1770\tATPF1G\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.180\tC\tATP synthase F1 subunit gamma protein, putative\tLmjF21.1770\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1170\tATPB\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1170\tmRNA\ttaxon:347515\t20141208\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1180\tATPB\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1380\tC\tATP synthase subunit beta, mitochondrial, putative\tLmjF25.1180\tmRNA\ttaxon:347515\t20141208\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3600\tLmjF.30.3600\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4990\tC\tATP synthase, epsilon chain, putative\tLmjF30.3600\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0620\tLmjF.36.0620\t\tGO:0000275\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5050\tC\thypothetical protein, conserved\tLmjF36.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000275", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0740\tLmjF.21.0740\t\tGO:0000276\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1570\tC\tATPase subunit 9, putative\tLmjF21.0740\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000276", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0630\tLmjF.24.0630\t\tGO:0000276\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5280\tC\tATPase subunit 9, putative\tLmjF24.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000276", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0460\tLmjF.26.0460\t\tGO:0000276\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1470\tC\tATPase subunit 9, putative\tLmjF26.0460\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000276", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0710\tABCE1\t\tGO:0000291\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1630\tP\tATP-binding cassette protein subfamily E, member 1, putative\tLmjF21.0710\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000291", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0310\tLmjF.25.0310\t\tGO:0000784\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.370\tC\thypothetical protein, conserved\tLmjF25.0310\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000784", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1820\tRPA1\t\tGO:0000784\tGO_REF:0000024\tISO\tUniProtKB:Q5MY89\tC\tReplication factor A protein 1\tLmjF28.1820\tmRNA\ttaxon:347515\t20160802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000784", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1660\tLmjF.31.1660\t\tGO:0000790\tGO_REF:0000012\tISA\tUniProtKB:PSF3_SCHPO\tC\tGINS complex subunit Psf3, putative\tLmjF31.1660\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0000790", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1150\tMTRNAP\t\tGO:0001065\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5780\tF\tDNA-directed RNA polymerase, mitochondrial\tLmjF24.1150\tmRNA\ttaxon:347515\t20150622\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0001065", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0350\tLmjF.12.0350\t\tGO:0001104\tGO_REF:0000002\tISO\tGeneDB:Tb927.6.850\tF\tCCR4-NOT transcription complex subunit 2, putative\tLmjF12.0350\tmRNA\ttaxon:347515\t20120319\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0001104", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3930\tTERT\t\tGO:0003721\tPMID:16416120\tISA\tUniProtKB:Q2NNR6_LEIAM\tF\ttelomerase reverse transcriptase, putative\tLmjF36.3930\tmRNA\ttaxon:347515\t20090805\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003721", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3930\tTERT\t\tGO:0003721\tPMID:16091631\tISO\tGeneDB:Tb927.11.10190\tF\ttelomerase reverse transcriptase, putative\tLmjF36.3930\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003721", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0090\tpril\t\tGO:0003896\tGO_REF:0000011\tISM\tInterPro:IPR007238\tF\tDNA primase large subunit, putative\tLmjF03.0090\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003896", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0640\tLmjF.12.0640\t\tGO:0003896\tPMID:21257796|GO_REF:0000024\tISO\tGeneDB:Tb927.1.4010\tF\tprimase 2, putative\tLmjF12.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003896", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0680\tPRI1\t\tGO:0003896\tGO_REF:0000101\tISO\tGeneDB:Tb927.8.2550\tF\tmitochondrial DNA primase, putative\tLmjF23.0680\tmRNA\ttaxon:347515\t20100204\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003896", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0030\tppl1\t\tGO:0003896\tGO_REF:0000002\tISO\tGeneDB:Tb927.5.4070\tF\tPrimPol-like protein 1, putative\tLmjF33.0030\tmRNA\ttaxon:347515\t20140303\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003896", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0100\tppl2\tNOT\tGO:0003896\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.2520\tF\tPrimPol-like protein 2, putative\tLmjF34.0100\tmRNA\ttaxon:347515\t20140303\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003896", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0210\tSIR2RP1\t\tGO:0003956\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1690\tF\tSilent information regulator 2 related protein 1\tSIR2|LmjF26.0210\tmRNA\ttaxon:347515\t20091126\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0003956", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.1020\tLmjF.07.1020\t\tGO:0004003\tPMID:19646907\tISO\tGeneDB:Tb927.8.700\tF\tDNA repair and recombination helicase protein PIF7, putative\tLmjF07.1020\tmRNA\ttaxon:347515\t20110829\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0320\tPIF2\t\tGO:0004003\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.6900\tF\tDNA repair and recombination helicase protein PIF2, putative\tLmjF11.0320\tmRNA\ttaxon:347515\t20110824\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0330\tLmjF.11.0330\t\tGO:0004003\tPMID:20042610|GO_REF:0000024\tISO\tGeneDB:Tb927.11.6890|GeneDB:Tb11.02.4730\tF\tPIF1 helicase-like protein, putative\tLmjF11.0330\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1190\tPIF6\t\tGO:0004003\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.10.910\tF\tDNA repair and recombination helicase protein PIF6, putative\tLmjF21.1190\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2530\tLmjF.28.2530\t\tGO:0004003\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.11.11800|GeneDB:Tb11.01.3660\tF\tDNA repair and recombination helicase protein PIF3, putative\tLmjF28.2530\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1590\tLmjF.32.1590\t\tGO:0004003\tPMID:19646907|GO_REF:0000024\tISO\tGeneDB:Tb927.11.14790\tF\tDNA repair and recombination protein, mitochondrial precursor, putative\tLmjF32.1590\tpseudogenic_transcript\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004003", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0770\tEIF4A1\t\tGO:0004004\tGO_REF:0000024\tISO\tGeneDB:LinJ.01.0800|GeneDB:LinJ.01.0790\tF\tEukaryotic initiation factor 4A-1\tLmjF01.0770\tmRNA\ttaxon:347515\t20090402\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004004", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0780\tEIF4A1\t\tGO:0004004\tGO_REF:0000024\tISO\tGeneDB:LinJ.01.0800|GeneDB:LinJ.01.0790\tF\tEukaryotic initiation factor 4A-1\tLmjF01.0780\tmRNA\ttaxon:347515\t20090402\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004004", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2080\tMHEL61\t\tGO:0004004\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8870\tF\tDEAD-box ATP-dependent RNA helicase, mitochondrial\tLmjF28.2080|KREH1\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004004", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0870\tLmjF.36.0870\t\tGO:0004004\tGO_REF:0000012\tISA\tUniProtKB:Q14562\tF\tpre-mRNA splicing factor ATP-dependent RNA helicase, putative\tLmjF36.0870\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004004", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0510\tGPD\t\tGO:0004367\tPMID:10743613|GO_REF:0000024\tISO\tGeneDB:Tb927.8.3530\tF\tglycerol-3-phosphate dehydrogenase [NAD+], glycosomal\tLmjF10.0510\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004367", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1740\tKPAP2\t\tGO:0004652\tGO_REF:0000101\tISO\tGeneDB:Tb927.10.160\tF\tRNA polymerase II, putative\tLmjF21.1740\tmRNA\ttaxon:347515\t20100706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004652", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0780\tKPAP1\t\tGO:0004652\tGO_REF:0000101\tISO\tGeneDB:Tb927.11.7960\tF\tkinetoplast poly(A) polymerase 1\tLmjF28.0780|TUT5\tmRNA\ttaxon:347515\t20100706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004652", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0420\tLmjF.03.0420\t\tGO:0004724\tPMID:20551176\tISO\tGeneDB:Tb927.10.3360\tF\tPTP1-interacting protein, 39 kDa, putative\tLmjF03.0420\tmRNA\ttaxon:347515\t20110105\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004724", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.1250\tLmjF.34.1250\t\tGO:0004724\tPMID:20551176\tISO\tGeneDB:Tb09.160.4460\tF\tPTP1-interacting protein, 39 kDa, putative\tLmjF34.1250\tmRNA\ttaxon:347515\t20110105\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0004724", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6300\tGT1\t\tGO:0005355\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6300\tF\tglucose transporter 1\tLmjF36.6300\tmRNA\ttaxon:347515\t20131114\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005355", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0420\tLmjF.13.0420\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.4490\tC\tlong-chain-fatty-acid-CoA ligase, putative\tLmjF13.0420\tmRNA\ttaxon:347515\t20141203\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0120\tLmjF.20.0120\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.730\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF20.0120\tmRNA\ttaxon:347515\t20140725\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0420\tLmjF.21.0420\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.2230\tC\tNADPH:adrenodoxin oxidoreductase, mitochondrial, putative\tLmjF21.0420\tmRNA\ttaxon:347515\t20141016\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0290\tACP\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.860\tC\tacyl carrier protein, mitochondrial, putative\tLmjF27.0290|NDUFAB1\tmRNA\ttaxon:347515\t20141210\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0005747\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tC\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0690\tLmjF.29.0690\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3660\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF29.0690\tmRNA\ttaxon:347515\t20141219\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2210\tTAP151\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.15440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF32.2210\tmRNA\ttaxon:347515\t20141210\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4320\tLmjF.34.4320\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4320\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4350\tLmjF.34.4350\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4350\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4380\tLmjF.34.4380\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4380\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4410\tLmjF.34.4410\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4410\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4440\tLmjF.34.4440\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4440\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4470\tLmjF.34.4470\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4470\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4500\tLmjF.34.4500\t\tGO:0005747\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.440\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF34.4500\tmRNA\ttaxon:347515\t20150127\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3520\tLmjF.36.3520\t\tGO:0005747\tPMID:21610103|GO_REF:0000024\tISO\tGeneDB:Tb927.11.9930\tC\tNADH-ubiquinone oxidoreductase complex I subunit, putative\tLmjF36.3520\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005747", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1630\tSDH1\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511909.40\tC\tSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial\tLmjF24.1630\tmRNA\ttaxon:347515\t20150713\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005749", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1040\tSDH7\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.509053.140\tC\tsuccinate dehydrogenase subunit 7\tLmjF30.1040\tmRNA\ttaxon:347515\t20170511\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005749", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2845\tSDH3\t\tGO:0005749\tGO_REF:0000024\tISO\tGeneDB:TcCLB.511523.14\tC\tsuccinate dehydrogenase subunit 3\tLmjF30.2845\tmRNA\ttaxon:347515\t20170511\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005749", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3960\tLmjF.32.3960\t\tGO:0005750\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16220\tC\thypothetical protein, conserved\tLmjF32.3960\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005750", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0100\tLmjF.35.0100\t\tGO:0005750\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.4280\tC\tubiquinol-cytochrome c reductase complex 14kD subunit, putative\tLmjF35.0100\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005750", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0670\tCOXIV\t\tGO:0005751\tPMID:12467979\tISO\tGeneDB:LtaP12.0690\tC\tcytochrome oxidase subunit IV, putative\tLmjF12.0670\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005751", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0960\tLmjF.03.0960\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2880\tC\thypothetical protein, conserved\tLmjF03.0960\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1030\tLmjF.11.1030\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.6250\tC\thypothetical protein, conserved\tLmjF11.1030\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1360\tLmjF.23.1360\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.3320\tC\thypothetical protein, conserved\tLmjF23.1360\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0590\tLmjF.25.0590\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.600\tC\thypothetical protein, conserved\tLmjF25.0590\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1620\tLmjF.25.1620\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1690\tC\thypothetical protein, conserved\tLmjF25.1620\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2090\tLmjF.25.2090\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.2180\tC\thypothetical protein, conserved\tLmjF25.2090\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1100\tLmjF.26.1100\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.840\tC\thypothetical protein, conserved\tLmjF26.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0650\tLmjF.27.0650\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1270\tC\thypothetical protein, conserved\tLmjF27.0650\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.2800\tLmjF.33.2800\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.3610\tC\thypothetical protein, conserved\tLmjF33.2800\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0910\tLmjF.34.0910\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.3450\tC\thypothetical protein, conserved\tLmjF34.0910\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4460\tLmjF.36.4460\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9830\tC\thypothetical protein, conserved\tLmjF36.4460\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6760\tLmjF.36.6760\t\tGO:0005753\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8030\tC\tATP synthase delta (OSCP) subunit, putative\tLmjF36.6760\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0005753", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3780\tKAP3\t\tGO:0006323\tGO_REF:0000002\tISO\tGeneDB:TcCLB.511029.20\tP\tkinetoplast-associated protein 3, putative\tLmjF32.3780\tmRNA\ttaxon:347515\t20100908\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006323", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0060\tLmjF.04.0060\t\tGO:0006333\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.6940\tP\tDNA topoisomerase type IB small subunit, putative\tLmjF04.0060\tmRNA\ttaxon:347515\t20090429\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006333", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1820\tLmjF.29.1820\t\tGO:0006461\tPMID:20659504|GO_REF:0000024\tISO\tGeneDB:Tb927.3.4380\tP\tTob55, putative\tLmjF29.1820\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006461", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0110\tGDPMP\t\tGO:0006486\tGO_REF:0000002\tISS\t\tP\tGDP-mannose pyrophosphorylase\tEXGMP|LmjF23.0110\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006486", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2420\tLmjF.34.2420\t\tGO:0006490\tGO_REF:0000012\tISA\tUniProtKB:ALG2_YEAST\tP\tdolichyl-P-Man:GDP-Man1GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF34.2420\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006490", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5250\tALG11\t\tGO:0006490\tPMID:20382188\tISO\tGeneDB:Tb09.211.0860\tP\talpha-1,2-mannosyltransferase, putative\tLmjF35.5250\tmRNA\ttaxon:347515\t20100824\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006490", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.5250\tALG11\t\tGO:0006490\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.9.9200|GeneDB:Tb09.211.0860\tP\talpha-1,2-mannosyltransferase, putative\tLmjF35.5250\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006490", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2040\tALG3\t\tGO:0006490\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6530\tP\tdolichyl-P-Man:GDP-Man5GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF36.2040\tmRNA\ttaxon:347515\t20100907\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006490", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0630\tALAT\t\tGO:0006524\tPMID:19443056|GO_REF:0000024\tISO\tGeneDB:Tb927.1.3950\tP\talanine aminotransferase\tLmjF12.0630\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006524", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2850\tSAT\t\tGO:0006535\tPMID:19296828\tIDA\t\tP\tserine acetyltransferase\tLmjF34.2850\tmRNA\ttaxon:347515\t20090720\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006535", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1130\tLmjF.09.1130\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13290\tP\tmitochondrial import inner membrane translocase subunit TIM17, putative\tLmjF09.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0945\tATOM12\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4380\tP\tPresent in the outer mitochondrial membrane proteome 40\tLmjF10.0945|POMP40\tmRNA\ttaxon:347515\t20150330\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0940\tATOM14\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5600\tP\tArchaic Translocase of outer membrane 14 kDa subunit, putative\tLmjF24.0940|POMP14\tmRNA\ttaxon:347515\t20150330\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0930\tATOM46\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7780\tP\tPresent in the outer mitochondrial membrane proteome 16\tLmjF28.0930|POMP16\tmRNA\ttaxon:347515\t20150330\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2170\tATOM69\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11460\tP\tPresent in the outer mitochondrial membrane proteome 9\tLmjF28.2170|POMP9\tmRNA\ttaxon:347515\t20150330\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0420\tATOM11\t\tGO:0006626\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11030\tP\tArchaic translocase of outer membrane 11 kDa subunit, putative\tLmjF33.0420|POMP21\tmRNA\ttaxon:347515\t20150330\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006626", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3740\tLmjF.34.3740\t\tGO:0006643\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.4.1020\tP\tserine palmitoyltransferase-like protein\tLmjF34.3740\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0006643", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0200\tLmjF.26.0200\t\tGO:0007067\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.1710\tP\teukaryotic peptide chain release factor subunit 1, putative\tLmjF26.0200\tmRNA\ttaxon:347515\t20120725\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0007067", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1640\tUMSBP\t\tGO:0007067\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.6060\tP\tuniversal minicircle sequence binding protein, putative\tLmjF36.1640\tmRNA\ttaxon:347515\t20141124\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0007067", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0007126\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tP\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0007126", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1000\tLmjF.19.1000\t\tGO:0008374\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tF\tglycerol uptake protein, putative\tLmjF19.1000\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008374", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1320\tLmjF.19.1320\t\tGO:0008374\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tF\tglycerol uptake protein, putative\tLmjF19.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008374", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1330\tLmjF.19.1330\t\tGO:0008374\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tF\tglycerol uptake protein, putative\tLmjF19.1330\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008374", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1340\tLmjF.19.1340\t\tGO:0008374\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tF\tglycerol uptake protein, putative\tLmjF19.1340\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008374", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1345\tLmjF.19.1345\t\tGO:0008374\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tF\tglycerol uptake protein, putative\tLmjF19.1345\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008374", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1347\tLmjF.19.1347\t\tGO:0008374\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15910\tF\tmembrane-bound O-acyltransferase, putative\tLmjF19.1347\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0008374", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2640\tCD\t\tGO:0009093\tPMID:20541568\tIDA\t\tP\tcysteine desulfhydrase\tLmjF32.2640\tmRNA\ttaxon:347515\t20100623\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0009093", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2640\tCD\t\tGO:0009093\tPMID:20541568\tIDA\t\tP\tcysteine desulfhydrase\tLmjF32.2640\tmRNA\ttaxon:347515\t20100623\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0009093", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2930\tPHO91\t\tGO:0015321\tGO_REF:0000024\tISO\tGeneDB:TcCLB.508831.60\tF\tLow-affinity phosphate transporter PHO91\tLmjF28.2930\tmRNA\ttaxon:347515\t20160802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015321", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.3060\tLIT1-1\t\tGO:0015684\tPMID:17000865\tISO\tGeneDB:LmxM.30.3060\tP\tferrous iron transport protein, putative\tLmjF31.3060\tmRNA\ttaxon:347515\t20111108\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015684", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6280\tGT3\t\tGO:0015758\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6280\tP\tglucose transporter 3\tLmjF36.6280\tmRNA\ttaxon:347515\t20131112\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015758", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6290\tGT2\t\tGO:0015758\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6290\tP\tglucose transporter 2\tLmjF36.6290\tmRNA\ttaxon:347515\t20131112\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015758", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6300\tGT1\t\tGO:0015758\tGO_REF:0000002\tISO\tGeneDB:LmxM.36.6300\tP\tglucose transporter 1\tLmjF36.6300\tmRNA\ttaxon:347515\t20131112\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015758", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3120\tLPG2\t\tGO:0015784\tPMID:9013638\tIMP\t\tP\tlipophosphoglycan biosynthetic protein (lpg2)\tLmjF34.3120\tmRNA\ttaxon:347515\t20100616\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015784", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0870\tAAP3\t\tGO:0015809\tPMID:19439418\tISO\tGeneDB:LinJ.31.0900\tP\tamino acid permease 3\tAAT13.1|LmjF31.0870\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0015809", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0520\tLmjF.04.0520\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 1, putative\tLmjF04.0520\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0040\tGPI12\t\tGO:0016021\tPMID:12364327\tEXP\t\tC\tN-acetyl-D-acetylglucosaminylphosphatidylinositol deacetylase\tLmjF09.0040\tmRNA\ttaxon:347515\t20090506\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0640\tLmjF.09.0640\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 5, putative\tLmjF09.0640\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0016021\tGO_REF:0000024\tISO\tGeneDB:LinJ.10.0760\tC\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20110223\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0016021\tGO_REF:0000024\tISO\tGeneDB:LinJ.10.0760\tC\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20110223\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0016021\tGO_REF:0000024\tISO\tGeneDB:LinJ.10.0760\tC\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20110223\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1160\tRABX1\t\tGO:0016021\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.4610\tC\tRas-related protein RabX1, putative\tLmjF10.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1080\tLmjF.11.1080\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 7, putative\tLmjF11.1080\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1090\tLmjF.11.1090\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 7, putative\tLmjF11.1090\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.0650\tPAT6\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 6, putative\tLmjF13.0650\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0800\tABCF2\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tABC transport system ATP-binding protein, putative\tLmjF19.0800\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.1250\tPEX12\t\tGO:0016021\tPMID:17188680|GO_REF:0000024\tISO\tGeneDB:Tb927.10.15850\tC\tperoxin 12, putative\tLmjF19.1250\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1390\tLmjF.21.1390\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 3, putative\tLmjF21.1390\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1400\tLmjF.21.1400\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 3, putative\tLmjF21.1400\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1420\tLmjF.23.1420\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 12, putative\tLmjF23.1420\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0530\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tLmjF25.0530\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2280\tLmjF.25.2280\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 10, putative\tLmjF25.2280\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1560\tLmjF.27.1560\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tdiacylglycerol acyltransferase, putative\tLmjF27.1560\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1590\tLmjF.27.1590\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tdiacylglycerol acyltransferase, putative\tLmjF27.1590\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0220\tLmjF.28.0220\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 9, putative\tLmjF28.0220\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1890\tLmjF.28.1890\t\tGO:0016021\tPMID:11152613\tISO\tGeneDB:Tb11.01.0810\tC\tpalmitoyl acyltransferase 4, putative\tLmjF28.1890\tmRNA\ttaxon:347515\t20110713\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2000\tLDK\t\tGO:0016021\tPMID:20833891|GO_REF:0000024\tISO\tGeneDB:Tb927.11.8940|GeneDB:Tb11.01.0670\tC\tprotein lipid droplet kinase (LDK)\tLmjF28.2000\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0920\tLmjF.29.0920\t\tGO:0016021\tPMID:19797662\tISO\tGeneDB:TcCLB.507951.270\tC\tLETM1 and EF-hand domain-containing protein 1, putative\tLmjF29.0920\tmRNA\ttaxon:347515\t20120524\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1960\tLmjF.32.1960\t\tGO:0016021\tPMID:11152613\tISS\t\tC\t1-acyl-sn-glycerol-3-phosphateacyltransferase-like protein, putative\tLmjF32.1960\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2560\tTTA1\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tGPI transamidase component Tta1, putative\tLmjF32.2560\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.0230\tLmjF.33.0230\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tpalmitoyl acyltransferase 2, putative\tLmjF33.0230\tmRNA\ttaxon:347515\t20110802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1860\tABCD3\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tglycosomal transporter (GAT2), putative\tLmjF33.1860\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2150\tEIF2AK2\t\tGO:0016021\tGO_REF:0000012\tISA\tUniProtKB:Q9NIV1\tC\teukaryotic translation initiation factor 2-alpha kinase 2\tLmjF34.2150\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3850\tLmjF.34.3850\t\tGO:0016021\tPMID:11152613\tISS\t\tC\taquaporin 2, putative\tLmjF34.3850\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4180\tLmjF.36.4180\t\tGO:0016021\tPMID:11152613\tISS\t\tC\tUDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase, putative\tLmjF36.4180\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016021", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3090\tPIPKA\t\tGO:0016307\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1620\tF\tphosphatidylinositol 4-phosphate 5-kinase alpha, putative\tLmjF34.3090|PIP5KII-alpha\tmRNA\ttaxon:347515\t20150618\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0016307", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0660\tLmjF.05.0660\t\tGO:0017144\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7230\tP\tnitroreductase-like protein\tLmjF05.0660\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0017144", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0970\tMST\t\tGO:0019343\tPMID:12419809\tIDA\t\tP\t3-mercaptopyruvate sulfurtransferase\tLmjF05.0970\tmRNA\ttaxon:347515\t20091009\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0019343", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1770\tEnCR\t\tGO:0019408\tPMID:20637498\tISS\t\tP\tenoyl-CoA reductase, putative\tLmjF25.1770\tmRNA\ttaxon:347515\t20100922\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0019408", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.0370\tLmjF.24.0370\t\tGO:0019509\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.5090\tP\taspartate aminotransferase, putative\tLmjF24.0370\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0019509", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0820\tLmjF.35.0820\t\tGO:0019509\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3660\tP\taspartate aminotransferase, putative\tLmjF35.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0019509", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0020012\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.8190\tP\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130916\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0020012", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1140\tLmjF.20.1140\t\tGO:0030173\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\tLmjF20.1140\tmRNA\ttaxon:347515\t20140812\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030173", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1620\tCDS\t\tGO:0030173\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.220\tC\tCDP-DAG synthase, putative\tLmjF26.1620\tmRNA\ttaxon:347515\t20140805\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030173", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1170\tLmjF.05.1170\t\tGO:0030176\tGO_REF:0000002\tEXP\t\tC\tfatty acid elongase, putative\tLmjF05.1170\tmRNA\ttaxon:347515\t20090726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0640\tELO1.1\t\tGO:0030176\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.4180\tC\tfatty acid elongase, putative\tLmjF14.0640\tmRNA\ttaxon:347515\t20100726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0660\tELO1.3\t\tGO:0030176\tGO_REF:0000002\tISO\tGeneDB:Tb927.7.4180\tC\tfatty acid elongase, putative\tLmjF14.0660\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0405\tLmjF.30.0405\t\tGO:0030176\tGO_REF:0000002\tISA\tUniProtKB:CAX4_YEAST\tC\tdolichyl pyrophosphate phosphatase, putative\tLmjF30.0405\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2930\tLmjF.35.2930\t\tGO:0030176\tGO_REF:0000012\tISA\tUniProtKB:DOLK_HUMAN\tC\tdolichol kinase, putative\tLmjF35.2930\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030176", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0030423\tGO_REF:0000012\tISA\tUniProtKB:CLP1_HUMAN\tP\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030423", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0030433\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST|UniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030433", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1170\tDRBD3\t\tGO:0030529\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.8740\tC\tDouble RNA binding domain protein 3\tLmjF04.1170|PTB1\tmRNA\ttaxon:347515\t20130822\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030529", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0130\tLmjF.27.0130\t\tGO:0030529\tPMID:19247446|GO_REF:0000024\tISO\tGeneDB:Tb927.3.720\tC\tWW domain/Zinc finger C-x8-C-x5-C-x3-H type (and similar), putative\tLmjF27.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030529", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0030529\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tC\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0030529", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1940\tNT2\t\tGO:0031226\tGO_REF:0000024\tISO\tGeneDB:LdBPK_362040.1\tC\tinosine-guanosine transporter\tLmjF36.1940\tmRNA\ttaxon:347515\t20100819\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031226", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0031304\tPMID:19749178\tIDA\t\tC\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031304", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1130\tLmjF.09.1130\t\tGO:0031305\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13290\tC\tmitochondrial import inner membrane translocase subunit TIM17, putative\tLmjF09.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031305", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0450\tLmjF.02.0450\t\tGO:0031307\tGO_REF:0000101\tISO\tGeneDB:Tb927.2.2520\tC\tvoltage-dependent anion-selective channel, putative\tLmjF02.0450\tmRNA\ttaxon:347515\t20101007\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031307", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.02.0460\tVDAC\t\tGO:0031307\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.2510\tC\tvoltage-dependent anion-selective channel, putative\tLmjF02.0460|Porin\tmRNA\ttaxon:347515\t20101007\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031307", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4860\tATOM40\t\tGO:0031307\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.9660\tC\tArchaic translocase outer mitochondrial membrane 40, putative\tLmjF35.4860\tmRNA\ttaxon:347515\t20150326\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031307", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1460\tLmjF.15.1460\t\tGO:0031388\tPMID:1846667\tISS\t\tP\tphosphomevalonate kinase protein, putative\tLmjF15.1460\tmRNA\ttaxon:347515\t20100921\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0031388", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0510\tLmjF.29.0510\t\tGO:0032054\tPMID:20460437\tISO\tGeneDB:LinJ.29.0520\tP\tADF/Cofilin\tLmjF29.0510\tmRNA\ttaxon:347515\t20100720\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032054", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2210\tLRTP\t\tGO:0032054\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4770|GeneDB:Tb927.3.4730\tP\tleucine-rich repeat-containing protein\tLmjF29.2210\tmRNA\ttaxon:347515\t20141209\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032054", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4280\tSAS6\t\tGO:0032054\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.10550\tP\tSpindle assembly abnormal protein 6 homolog\tLmjF35.4280|SASS6\tmRNA\ttaxon:347515\t20160726\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0032054", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0033676\tPMID:11420107\tIDA\t\tF\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130913\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0033676", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1810\tDRC4\t\tGO:0034613\tGO_REF:0000012\tISA\tUniProtKB:Q60779\tP\ttrypanin-like protein\tLmjF35.1810|GAS8\tmRNA\ttaxon:347515\t20160719\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0034613", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0090\tABCG2\t\tGO:0035690\tPMID:27021316\tIMP\t\tP\tATP-binding cassette protein subfamily G, member 2\tLmjF06.0090\tmRNA\ttaxon:347515\t20160711\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0035690", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.1160\tLmjF.28.1160\t\tGO:0035690\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.7480\tP\tvacuolar type h+ ATPase subunit, putative\tLmjF28.1160\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0035690", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0550\tCLRP\t\tGO:0035690\tGO_REF:0000024\tISO\tGeneDB:LinJ.34.0570\tP\tCysteine leucine rich protein\tLmjF34.0550\tmRNA\ttaxon:347515\t20160801\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0035690", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1760\ttbccd1\t\tGO:0040023\tGO_REF:0000002\tISO\tGeneDB:Tb927.11.2440\tP\tTubulin cofactor C domain-containing protein 1, putative\tLmjF27.1760\tmRNA\ttaxon:347515\t20140414\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0040023", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0660\tLmjF.05.0660\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.7230\tP\tnitroreductase-like protein\tLmjF05.0660\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.1140\tVAd\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.550\tP\tV-type proton ATPase subunit D, putative\tLmjF05.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0070\tLmjF.06.0070\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4750\tP\thypothetical protein, conserved\tLmjF06.0070\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0950\tLmjF.06.0950\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.5560\tP\tglucosamine-fructose-6-phosphate aminotransferase, putative\tLmjF06.0950\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0290\tLmjF.07.0290\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1570\tP\tUncharacterised protein family (UPF0172), putative\tLmjF07.0290\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.07.0380\tLmjF.07.0380\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.1480\tP\tRAVE protein 1 C terminal, putative\tLmjF07.0380\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.0090\tLmjF.08.0090\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3610\tP\tadaptor complex protein (AP) 3 delta subunit 1, putative\tLmjF08.0090\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0240\tLmjF.09.0240\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12240\tP\tcysteine peptidase, Clan CA, family C19, putative\tLmjF09.0240\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0780\tLmjF.09.0780\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.12860\tP\tDomain of unknown function (DUF4464), putative\tLmjF09.0780\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0520\tLmjF.12.0520\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3820\tP\tvacuolar ATP synthase subunit, putative\tLmjF12.0520\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1130\tLmjF.13.1130\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3700\tP\tUncharacterised ACR, YagE family COG1723, putative\tLmjF13.1130\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0220\tLmjF.14.0220\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.4500\tP\tPX domain containing protein, putative\tLmjF14.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0120\tLmjF.17.0120\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.6260\tP\thypothetical protein, conserved\tLmjF17.0120\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1530\tLmjF.18.1530\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12490\tP\tkinesin, putative\tLmjF18.1530\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0260\tLmjF.19.0260\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.14890\tP\tC-terminal motor kinesin, putative\tLmjF19.0260\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0610\tLmjF.19.0610\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.15320\tP\thypothetical protein, conserved\tLmjF19.0610\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1480\tLmjF.20.1480\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.1.3300\tP\tzinc-binding phosphatase, putative\tLmjF20.1480\tmRNA\ttaxon:347515\t20141204\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0130\tLmjF.21.0130\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1910\tP\tSTE/STE11 serine/threonine-protein kinase, putative\tLmjF21.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0820\tLmjF.21.0820\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.1490\tP\tTemperature dependent protein affecting M2 dsRNA replication, putative\tLmjF21.0820\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1340\tLmjF.21.1340\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.730\tP\tATP synthase, putative\tLmjF21.1340\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1790\tLmjF.21.1790\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.200\tP\tvacuolar ATP synthase, putative\tLmjF21.1790\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.1800\tLmjF.21.1800\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.200\tP\tvacuolar ATP synthase, putative\tLmjF21.1800\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1140\tLmjF.22.1140\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3180\tP\tadaptor complex AP-1 medium subunit, putative\tLmjF22.1140\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0130\tLmjF.23.0130\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2100\tP\tvacuolar type h+ ATPase subunit, putative\tLmjF23.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0210\tABCC1\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2160\tP\tATP-binding cassette protein subfamily C, member 1, putative\tLmjF23.0210\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0220\tABCC2\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2160\tP\tATP-binding cassette protein subfamily C, member 2, putative\tLmjF23.0220\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0250\tMRPA\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2160\tP\tABC-thiol transporter\tABCC3|LmjF23.0250|PGPA\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0340\tLmjF.23.0340\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.2310\tP\t(H+)-ATPase G subunit, putative\tLmjF23.0340\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1510\tVAa\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.1300\tP\tvacuolar proton translocating ATPase subunit A, putative\tLmjF23.1510\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1540\tLmjF.24.1540\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.6680\tP\tadaptor complex AP-3 small subunit, putative\tLmjF24.1540\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2320\tMKK4\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.8.5950\tP\tmitogen-activated protein kinase kinase 4, putative\tLmjF24.2320\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0830\tLmjF.25.0830\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.810\tP\thypothetical protein, conserved\tLmjF25.0830\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1460\tCARP4\t\tGO:0042493\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.1060\tP\tcAMP response protein, putative\tLmjF25.1460\tmRNA\ttaxon:347515\t20130829\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1720\tLmjF.25.1720\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1800\tP\thypothetical protein, conserved\tLmjF25.1720\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0680\tLmjF.26.0680\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1290\tP\tProtein of unknown function (DUF2012), putative\tLmjF26.0680\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2650\tLmjF.26.2650\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.1350\tP\thypothetical protein, conserved\tLmjF26.2650\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.0620\tLmjF.27.0620\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.1240\tP\thypothetical protein, conserved\tLmjF27.0620\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1870\tTRYS\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.4370\tP\ttrypanothione synthetase\tLmjF27.1870\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0640\tLmjF.28.0640\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.8130\tP\tATP synthase subunit H, putative\tLmjF28.0640\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2430\tLmjF.28.2430\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.11690\tP\tVacuolar proton pump subunit B, putative\tLmjF28.2430\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1440\tLmjF.29.1440\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4000\tP\tclathrin coat assembly protein ap19, putative\tLmjF29.1440\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1600\tLmjF.29.1600\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.4190\tP\tendomembrane protein 70, putative\tLmjF29.1600\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1625\tLmjF.30.1625\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2600\tP\tProtein of unknown function (DUF1077), putative\tLmjF30.1625\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1630\tLmjF.30.1630\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2600\tP\tProtein of unknown function (DUF1077), putative\tLmjF30.1630\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1635\tLmjF.30.1635\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2600\tP\tProtein of unknown function (DUF1077), putative\tLmjF30.1635\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1640\tLmjF.30.1640\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2600\tP\tProtein of unknown function (DUF1077), putative\tLmjF30.1640\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1645\tLmjF.30.1645\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2600\tP\tProtein of unknown function (DUF1077), putative\tLmjF30.1645\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1650\tLmjF.30.1650\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2600\tP\tProtein of unknown function (DUF1077), putative\tLmjF30.1650\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1660\tLmjF.30.1660\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.2600\tP\tProtein of unknown function (DUF1077), putative\tLmjF30.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2220\tLmjF.30.2220\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.3520\tP\tUncharacterised ACR, YagE family COG1723, putative\tLmjF30.2220\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2740\tSGT\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.4000\tP\tsmall glutamine-rich tetratricopeptide repeat protein, putative\tLmjF30.2740\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.3660\tLmjF.30.3660\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.6.5050\tP\tV-type ATPase, C subunit, putative\tLmjF30.3660\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0042493\tPMID:23421749\tIMP\t\tP\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20131121\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1270\tLmjF.31.1270\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4490\tP\tp-glycoprotein e\tABCC4|LmjF31.1270\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1280\tABCC5\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4490\tP\tATP-binding cassette protein subfamily C, member 5, putative\tLmjF31.1280\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1290\tABCC6\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4490\tP\tATP-binding cassette protein subfamily C, member 6, putative\tLmjF31.1290\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1320\tLmjF.31.1320\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4510\tP\tprotein phosphatase 2C, putative\tLmjF31.1320\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1430\tPRP1\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.4490\tP\tpentamidine resistance protein 1\tABCC7|LmjF31.1430\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3970\tCARP1\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.16210\tP\tcAMP response protein 1, putative\tLmjF32.3970\tmRNA\ttaxon:347515\t20130830\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1380\tMPK11\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.12040\tP\tmitogen activated protein kinase, putative\tLmjF33.1380\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0070\tAPX\t\tGO:0042493\tPMID:23421749\tIMP\t\tP\tascorbate peroxidase\tLmjF34.0070\tmRNA\ttaxon:347515\t20131121\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0080\tG6PDH\t\tGO:0042493\tPMID:23421749\tIMP\t\tP\tglucose-6-phosphate 1-dehydrogenase, putative\tLmjF34.0080\tmRNA\ttaxon:347515\t20131121\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0200\tARM58\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:LinJ.34.0220\tP\tAntimony resistance marker of 58 kDa\tLmjF34.0200\tmRNA\ttaxon:347515\t20150220\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2320\tLmjF.34.2320\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2320\tP\thypothetical protein, conserved\tLmjF34.2320\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2473\tLmjF.34.2473\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2170\tP\thypothetical protein, conserved\tLmjF34.2473\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2590\tAP3M\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.2020\tP\tAP-3 complex subunit mu, putative\tLmjF34.2590\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3670\tLmjF.34.3670\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.1080\tP\tvacuolar ATP synthase catalytic subunit A, putative\tLmjF34.3670\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3970\tLmjF.34.3970\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.760\tP\tAP-1 adapter complex gamma subunit, putative\tLmjF34.3970\tmRNA\ttaxon:347515\t20150105\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4130\tLmjF.34.4130\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.4.590\tP\tProtein of unknown function (DUF1620), putative\tLmjF34.4130\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0700\tLmjF.35.0700\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.3760\tP\tvacuolar ATP synthase subunit d, putative\tLmjF35.0700\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.1740\tLmjF.35.1740\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.14470\tP\tubiquitin hydrolase, putative\tLmjF35.1740\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2080\tLmjF.35.2080\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.15460\tP\tcalcium motive p-type ATPase, putative\tLmjF35.2080\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2420\tATG24\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.13380\tP\tAutophagy-related protein 24\tLmjF35.2420|SNX4\tmRNA\ttaxon:347515\t20150625\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3160\tLmjF.35.3160\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.12430\tP\triboflavin kinase/fmn adenylyltransferase-like protein\tLmjF35.3160\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1400\tLmjF.36.1400\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5810\tP\tThe ARF-like 2 binding protein BART, putative\tLmjF36.1400\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3100\tLmjF.36.3100\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.9420\tP\tATP synthase, putative\tLmjF36.3100\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4530\tLmjF.36.4530\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.9900\tP\tABC1 protein, putative\tLmjF36.4530\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5260\tAP3B3\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10650\tP\tAdaptor protein complex AP-3 subunit beta-3\tLmjF36.5260\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6347\tLmjF.36.6347\t\tGO:0042493\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.8370\tP\thypothetical protein, conserved\tLmjF36.6347\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.6770\tLmjF.36.6770\t\tGO:0042493\tGO_REF:0000002\tISO\tGeneDB:Tb927.10.8040\tP\tadaptin complex 1 subunit, putative\tLmjF36.6770\tmRNA\ttaxon:347515\t20141125\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042493", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1140\tTSIF\t\tGO:0042534\tGO_REF:0000101\tISO\tGeneDB:Tb927.5.2970\tP\tsuppressive immunomodulating factor, putative\tLmjF08.1140\tmRNA\ttaxon:347515\t20100218\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0042534", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0043142\tPMID:11420107\tIDA\t\tF\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130913\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043142", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.08.1170\tMRB3010\t\tGO:0043234\tGO_REF:0000024\tISO\tGeneDB:Tb927.5.3010\tC\tguide RNA binding protein, putative\tLmjF08.1170\tmRNA\ttaxon:347515\t20150105\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043234", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.03.0160\tABCF1\t\tGO:0043492\tPMID:17030997\tISM\t\tF\tATP-binding cassette protein subfamily F, member 1, putative\tLmjF03.0160\tmRNA\ttaxon:347515\t20090608\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043492", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1480\tJBP1\t\tGO:0043566\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13640|UniProtKB:Q9U6M1\tF\tJ-binding protein\tLmjF09.1480\tmRNA\ttaxon:347515\t20160126\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043566", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1820\tLmjF.29.1820\t\tGO:0043623\tGO_REF:0000002\tISO\tGeneDB:Tb927.3.4380\tP\tTob55, putative\tLmjF29.1820\tmRNA\ttaxon:347515\t20090617\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0043623", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.0870\tFYRP\t\tGO:0044212\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.1060\tF\tISWI complex protein\tLmjF26.0870\tmRNA\ttaxon:347515\t20160706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0044212", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1700\tISWI\t\tGO:0044212\tGO_REF:0000024\tISO\tGeneDB:Tb927.2.1810\tF\tISWI complex protein\tLmjF33.1700\tmRNA\ttaxon:347515\t20160706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0044212", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1060\tNLP\t\tGO:0044212\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.5450\tF\tISWI complex protein\tLmjF36.1060\tmRNA\ttaxon:347515\t20160706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0044212", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4060\tRCCP\t\tGO:0044212\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.10330\tF\tISWI complex protein\tLmjF36.4060\tmRNA\ttaxon:347515\t20160706\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0044212", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3540\tPNO1\t\tGO:0044822\tGO_REF:0000012\tISA\tUniProtKB:PNO1_HUMAN\tF\tpre-rRNA-processing protein PNO1, putative\tLmjF35.3540\tmRNA\ttaxon:347515\t20140731\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0044822", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1630\tLmjF.25.1630\t\tGO:0046467\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.1700\tP\tdiacylglycerol acyltransferase, putative\tLmjF25.1630\tmRNA\ttaxon:347515\t20151016\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0046467", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.1610\tLmjF.16.1610\t\tGO:0046658\tPMID:19888987\tIDA\t\tC\tprohibitin\tLmjF16.1610\tmRNA\ttaxon:347515\t20091210\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0046658", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1020\tLmjF.15.1020\t\tGO:0050347\tPMID:17062572\tISO\tGeneDB:TcCLB.509445.30\tF\tsolanesyl-diphosphate synthase, putative\tLmjF15.1020\tmRNA\ttaxon:347515\t20090930\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0050347", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1190\tnnr\t\tGO:0052857\tGO_REF:0000012\tISA\tUniProtKB:P31806\tF\tBifunctional NAD(P)H-hydrate repair enzyme\tLmjF14.1190|yjeF\tmRNA\ttaxon:347515\t20160126\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0052857", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0020\tAQP1\t\tGO:0070838\tPMID:15138256\tIMP\t\tP\tAquaglyceroporin 1\tLmjF31.0020\tmRNA\ttaxon:347515\t20190429\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0070838", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1180\tLmjF.14.1180\t\tGO:0071050\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3780\tP\tpoly(A) polymerase, putative\tLmjF14.1180\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071050", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2600\tPAP\t\tGO:0071050\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3160\tP\tpoly(A) polymerase, putative\tLmjF29.2600\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0071050", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0460\tGP63-1\t\tGO:0075130\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0460\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0075130", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0465\tGP63-2\t\tGO:0075130\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0465\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0075130", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0470\tGP63-3\t\tGO:0075130\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0470\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0075130", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0480\tGP63-4\t\tGO:0075130\tPMID:19797268\tIMP\t\tP\tGP63, leishmanolysin\tmetallo-peptidase, Clan MA(M), Family M8|LmjF10.0480\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:0075130", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.01.0335\tMPC1\t\tGO:1902361\tGO_REF:0000024\tISO\tGeneDB:Tb927.9.3780\tP\tMitochondrial pyruvate carrier 1\tLmjF01.0335\tmRNA\ttaxon:347515\t20160725\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:1902361", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.1460\tMPC2\t\tGO:1902361\tGO_REF:0000024\tISO\tGeneDB:Tb927.7.3520\tP\tMitochondrial pyruvate carrier 2\tLmjF14.1460\tmRNA\ttaxon:347515\t20160725\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:1902361", "taxon": "NCBITaxon:347515", "rule": 20 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0850\tTDP1\t\tGO:1902377\tGO_REF:0000024\tISO\tGeneDB:Tb927.3.3490\tC\tTrypanosome DNA binding protein 1\tLmjF29.0850|HMGB\tmRNA\ttaxon:347515\t20160802\tGeneDB\n", "type": "Obsolete class", "message": "Violates GORULE:0000020, but was repaired", "obj": "GO:1902377", "taxon": "NCBITaxon:347515", "rule": 20 } ], "gorule-0000001": [ { "level": "ERROR", "line": "TriTrypDB\tLmjF.03.0080\tGAT\t\tGO:0005829\tGO_REF:0000002\tNR\t\tC\tglycerol-3-phosphate acyl transferase\tLmjF03.0080\tmRNA\ttaxon:347515\t20100803\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.20.0560\tLmjF.20.0560\t\tGO:0005829\tGO_REF:0000002\tNR\t\tC\tcytidine triphosphate synthase, putative\tLmjF20.0560\tmRNA\ttaxon:347515\t20100816\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.20.1120\tTOR4\t\tGO:0005829\tGO_REF:0000002\tNR\t\tC\tphosphatidylinositol 3-kinase, putative\tLmjF20.1120\tmRNA\ttaxon:347515\t20100817\tGeneDB", "type": "Unknown evidence class", "message": "Expecting a known ECO GAF code, e.g ISS", "obj": "NR", "taxon": "", "rule": 1 }, { "level": "ERROR", "line": "TriTrypDB\tLmjF.33.1100\tLmjF.33.1100\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.10.11720|GeneDB: Tb927.10.11720\tC\tCW-type Zinc Finger, putative\tLmjF33.1100\tmRNA\ttaxon:347515\t20190510\tGeneDB", "type": "Invalid symbol", "message": "Problem parsing with/from", "obj": "GeneDB:Tb927.10.11720|GeneDB: Tb927.10.11720", "taxon": "taxon:347515", "rule": 1 } ], "gorule-0000027": [ { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0060\tLmjF.04.0060\t\tGO:0000287\tGO_REF:0000024\tISO\tGeneDB:LdBPK_040070.1\tF\tDNA topoisomerase type IB small subunit, putative\tLmjF04.0060\tmRNA\ttaxon:347515\t20110706\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_040070.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_040070.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.0060\tLmjF.04.0060\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:LdBPK_040070.1\tF\tDNA topoisomerase type IB small subunit, putative\tLmjF04.0060\tmRNA\ttaxon:347515\t20110706\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_040070.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_040070.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.04.1230\tACT\t\tGO:0003677\tPMID:20147461\tISO\tGeneDB:LinJ04_V3.1250GeneDB:LinJ04_V3.1250\tF\tactin\tLmjF04.1230\tmRNA\ttaxon:347515\t20100614\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LinJ04_V3.1250GeneDB:LinJ04_V3.1250 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LinJ04_V3.1250GeneDB:LinJ04_V3.1250", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.05.0350\tTRYR\t\tGO:0070402\tPMID:7935607\tISA\tEMBL:CAA78264\tF\ttrypanothione reductase\tLmjF05.0350\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CAA78264 does not match any id_syntax patterns for EMBL in dbxrefs", "obj": "EMBL:CAA78264", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.06.0260\tXRNA\t\tGO:0004534\tGO_REF:0000024\tISS\tUniProtKB:XRN1_YEAST\tF\t5'-3' exoribonuclease A, putative\tLmjF06.0260\tmRNA\ttaxon:347515\t20150318\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: XRN1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:XRN1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0005524\tGO_REF:0000024\tISO\tGeneDB:LdBPK_090400.1\tF\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20101112\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_090400.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_090400.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:LdBPK_090400.1\tC\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20101112\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_090400.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_090400.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0043626\tGO_REF:0000024\tISO\tGeneDB:LdBPK_090400.1\tC\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20111003\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_090400.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_090400.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.0250\tMCM4\t\tGO:0044770\tGO_REF:0000024\tISO\tGeneDB:LdBPK_090400.1\tP\tDNA replication licensing factor MCM4, putative\tLmjF09.0250\tmRNA\ttaxon:347515\t20111003\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_090400.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_090400.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.09.1480\tJBP1\t\tGO:0005634\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.13640|UniProtKB:Q9U6M1|UniProtKB:TET1_MOUSE\tC\tJ-binding protein\tLmjF09.1480\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TET1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TET1_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0210\tNOP56\t\tGO:0006364\tGO_REF:0000002\tISS\tUniProtKB:NOP56_YEAST\tP\tnucleolar protein 56, putative\tLmjF10.0210\tmRNA\ttaxon:347515\t20140220\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NOP56_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NOP56_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0210\tNOP56\t\tGO:0031428\tGO_REF:0000002\tISS\tUniProtKB:NOP56_YEAST\tC\tnucleolar protein 56, putative\tLmjF10.0210\tmRNA\ttaxon:347515\t20140220\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NOP56_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NOP56_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0210\tNOP56\t\tGO:0032040\tGO_REF:0000002\tISS\tUniProtKB:NOP56_YEAST\tC\tnucleolar protein 56, putative\tLmjF10.0210\tmRNA\ttaxon:347515\t20140220\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NOP56_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NOP56_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0002036\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0005886\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tC\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0006971\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0015193\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tF\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0022858\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tF\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0035524\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0051955\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0070881\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0080144\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0090461\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20140130\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0710\tAAT20.1\t\tGO:0090465\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0710|AAP24.1\tmRNA\ttaxon:347515\t20140130\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0002036\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0005886\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tC\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0006971\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0015193\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tF\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0022858\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tF\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0035524\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0051955\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0070881\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0080144\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0090461\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20140130\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0715\tAAT20.2\t\tGO:0090465\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0715\tmRNA\ttaxon:347515\t20140130\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0002036\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0005886\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tC\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0006971\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0015193\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tF\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0022858\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tF\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0035524\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0051955\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0070881\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0080144\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20130828\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0090461\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20140130\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0720\tAAT20.3\t\tGO:0090465\tGO_REF:0000024\tISO\tGeneDB:LdBPK_100770.1\tP\tamino acid permease 24, putative\tLmjF10.0720|AAP24.3\tmRNA\ttaxon:347515\t20140130\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_100770.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_100770.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0830\tLmjF.10.0830\t\tGO:0004674\tGO_REF:0000002\tISS\tPANTHER:PTHR23257|Prosite:PS00108\tF\tserine/threonine-protein kinase, putative\tLmjF10.0830\tmRNA\ttaxon:347515\t20131125\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00108 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00108", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0830\tLmjF.10.0830\t\tGO:0005524\tGO_REF:0000002\tISS\tProsite:PS00107\tF\tserine/threonine-protein kinase, putative\tLmjF10.0830\tmRNA\ttaxon:347515\t20131125\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00107 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00107", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.0830\tLmjF.10.0830\t\tGO:0006468\tGO_REF:0000002\tISS\tPANTHER:PTHR23257|Prosite:PS00108\tP\tserine/threonine-protein kinase, putative\tLmjF10.0830\tmRNA\ttaxon:347515\t20131125\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00108 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00108", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1080\teif4g5\t\tGO:0005737\tGO_REF:0000012\tISA\tUniProtKB:IF4G1_MOUSE\tC\tEukaryotic translation initiation factor 4 gamma 5\tLmjF10.1080\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: IF4G1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:IF4G1_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1080\teif4g5\t\tGO:0016281\tGO_REF:0000024\tISO\tGeneDB:927.8.4500\tC\tEukaryotic translation initiation factor 4 gamma 5\tLmjF10.1080\tmRNA\ttaxon:347515\t20140710\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: 927.8.4500 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:927.8.4500", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1110\tPBP1\t\tGO:0010494\tGO_REF:0000012\tISA\tUniProtKB:PBP1_YEAST\tC\tPAB1-binding protein , putative\tLmjF10.1110\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PBP1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PBP1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1110\tPBP1\t\tGO:0034063\tGO_REF:0000012\tISA\tUniProtKB:PBP1_YEAST\tP\tPAB1-binding protein , putative\tLmjF10.1110\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PBP1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PBP1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.10.1110\tPBP1\t\tGO:0045727\tGO_REF:0000012\tISA\tUniProtKB:PBP1_YEAST\tP\tPAB1-binding protein , putative\tLmjF10.1110\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PBP1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PBP1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.0140\tLmjF.11.0140\t\tGO:0051219\tPMID:15470247\tISO\tGB:AAU29548\tF\tcell cycle sequence binding phosphoprotein (RBP45), putative\tLmjF11.0140\tmRNA\ttaxon:347515\t20101102\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GB not found in list of database names in dbxrefs", "obj": "GB:AAU29548", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.11.1000\tLmjF.11.1000\t\tGO:0020015\tGO_REF:0000002\tISO\tGeneDB:Tc00.1047053506297.190\tC\tpyruvate phosphate dikinase, putative\tLmjF11.1000\tmRNA\ttaxon:347515\t20100820\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tc00.1047053506297.190 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tc00.1047053506297.190", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.0670\tCOXIV\t\tGO:0005751\tPMID:12467979\tISO\tGeneDB:LtaP12.0690\tC\tcytochrome oxidase subunit IV, putative\tLmjF12.0670\tmRNA\ttaxon:347515\t20220901\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LtaP12.0690 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LtaP12.0690", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.12.1130\tNTR2\t\tGO:0005829\tGO_REF:0000024\tISO\tGeneDB:LdBPK_120730.1\tC\tActivating nitroreductase NTR2\tLmjF12.1130\tmRNA\ttaxon:347515\t20180524\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_120730.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_120730.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1040\tLmjF.13.1040\t\tGO:0004252\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tF\tsubtilisin-like serine peptidase\tLmjF13.1040\tmRNA\ttaxon:347515\t20101007\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_130940.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_130940.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1040\tLmjF.13.1040\t\tGO:0016485\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tP\tsubtilisin-like serine peptidase\tLmjF13.1040\tmRNA\ttaxon:347515\t20101007\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_130940.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_130940.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1040\tLmjF.13.1040\t\tGO:0030154\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tP\tsubtilisin-like serine peptidase\tLmjF13.1040\tmRNA\ttaxon:347515\t20141202\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_130940.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_130940.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1040\tLmjF.13.1040\t\tGO:0045454\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tP\tsubtilisin-like serine peptidase\tLmjF13.1040\tmRNA\ttaxon:347515\t20141202\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_130940.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_130940.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.13.1040\tLmjF.13.1040\t\tGO:2000377\tGO_REF:0000024\tISO\tGeneDB:LdBPK_130940.1\tP\tsubtilisin-like serine peptidase\tLmjF13.1040\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_130940.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_130940.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0050\tLmjF.14.0050\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\tLmjF14.0050\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0050\tLmjF.14.0050\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\tLmjF14.0050\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0050\tLmjF.14.0050\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\tLmjF14.0050\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0130\tIG-NH\t\tGO:0006190\tPMID:20825170|GO_REF:0000024\tISO\tGeneDB:Tb927.7.4570|GeneDB:Tb927.7.4570GeneDB:Tb927.7.4570\tP\tinosine-guanine nucleoside hydrolase, putative\tLmjF14.0130\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.7.4570GeneDB:Tb927.7.4570 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.7.4570GeneDB:Tb927.7.4570", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.14.0980\tFTP\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.840.1\tC\tsodium/hydrogen exchanger, putative\tLmjF14.0980\tmRNA\ttaxon:347515\t20150218\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb927.11.840.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb927.11.840.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0030\tLmjF.15.0030\t\tGO:0009897\tPMID:19961654\tISO\tGeneDB:LbrM.15.0030\tC\tATP diphosphohydrolase\tLmjF15.0030\tmRNA\ttaxon:347515\t20091230\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LbrM.15.0030 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LbrM.15.0030", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0030\tLmjF.15.0030\t\tGO:0032473\tPMID:19961654\tISO\tGeneDB:LbrM.15.0030\tC\tATP diphosphohydrolase\tLmjF15.0030\tmRNA\ttaxon:347515\t20091230\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LbrM.15.0030 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LbrM.15.0030", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0030\tLmjF.15.0030\t\tGO:0047693\tPMID:19961654\tISO\tGeneDB:LbrM.15.0030\tF\tATP diphosphohydrolase\tLmjF15.0030\tmRNA\ttaxon:347515\t20091230\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LbrM.15.0030 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LbrM.15.0030", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0960\tPOMP4\t\tGO:0005758\tGO_REF:0000012\tISA\tUniProtKB:ERV1_YEAST\tC\tPresent in the outer mitochondrial membrane proteome 4\tLmjF15.0960\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ERV1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ERV1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0960\tPOMP4\t\tGO:0016972\tGO_REF:0000012\tISA\tUniProtKB:ERV1_YEAST\tF\tPresent in the outer mitochondrial membrane proteome 4\tLmjF15.0960\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ERV1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ERV1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.0960\tPOMP4\t\tGO:0045041\tGO_REF:0000012\tISA\tUniProtKB:ERV1_YEAST\tP\tPresent in the outer mitochondrial membrane proteome 4\tLmjF15.0960\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ERV1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ERV1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1190\tLmjF.15.1190\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF15.1190\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1190\tLmjF.15.1190\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF15.1190\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1190\tLmjF.15.1190\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF15.1190\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1200\tLmjF.15.1200\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tSTE group serine/threonine-protein kinase, putative\tLmjF15.1200\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1200\tLmjF.15.1200\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tSTE group serine/threonine-protein kinase, putative\tLmjF15.1200\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1200\tLmjF.15.1200\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tSTE group serine/threonine-protein kinase, putative\tLmjF15.1200\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1250\tUFC1\t\tGO:0005739\tPMID:21264253\tISO\tGeneDB:LinJ15.1270\tC\tE2-like ubiquitin-conjugation enzyme, putative\tLmjF15.1250\tmRNA\ttaxon:347515\t20110201\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LinJ15.1270 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LinJ15.1270", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1250\tUFC1\t\tGO:0032182\tPMID:21264253\tISO\tGeneDB:LinJ15.1270\tF\tE2-like ubiquitin-conjugation enzyme, putative\tLmjF15.1250\tmRNA\ttaxon:347515\t20110201\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LinJ15.1270 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LinJ15.1270", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0000836\tGO_REF:0000002\tISA\tUniProtKB:HRD1_YEAST\tC\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0004842\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST\tF\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_SCHPO", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0004842\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST\tF\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0005783\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN\tC\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SYVN1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SYVN1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0005789\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN|UniProtKB:HRD1_YEAST\tC\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SYVN1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SYVN1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0005789\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN|UniProtKB:HRD1_YEAST\tC\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0006986\tGO_REF:0000002\tISA\tUniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SYVN1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SYVN1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0030433\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST|UniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_SCHPO", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0030433\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST|UniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HRD1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HRD1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.15.1410\tLmjF.15.1410\t\tGO:0030433\tGO_REF:0000002\tISA\tUniProtKB:HRD1_SCHPO|UniProtKB:HRD1_YEAST|UniProtKB:SYVN1_HUMAN\tP\tERAD-associated E3 ubiquitin-protein ligase HRD1, putative\tLmjF15.1410\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SYVN1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SYVN1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.16.0850\tLmjF.16.0850\t\tGO:0008180\tGO_REF:0000002\tISA\tUniProtKB:CSN5B_ARATH\tC\tCOP9 signalosome complex subunit 5, putative\tLmjF16.0850\tmRNA\ttaxon:347515\t20130903\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CSN5B_ARATH does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CSN5B_ARATH", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.17.0725\tGMPR\t\tGO:0003920\tGO_REF:0000024\tISO\tGeneDB:LdBPK_170870.1|GeneDB:Tb927.5.2080\tF\tGMP reductase\tLmjF17.0725\tmRNA\ttaxon:347515\t20160725\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_170870.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_170870.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0130\tLmjF.18.0130\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tDomain of unknown function DUF21, putative\tLmjF18.0130\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0130\tLmjF.18.0130\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tDomain of unknown function DUF21, putative\tLmjF18.0130\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0130\tLmjF.18.0130\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tDomain of unknown function DUF21, putative\tLmjF18.0130\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0005634\tGO_REF:0000024\tISS\tGeneDB:LdBPK_180270.1\tC\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_180270.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_180270.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LdBPK_180270.1\tC\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_180270.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_180270.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LdBPK_180270.1\tC\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20140612\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_180270.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_180270.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0270\tGSK3\t\tGO:0010389\tGO_REF:0000024\tISO\tGeneDB:LdBPK_180270.1\tP\tglycogen synthase kinase 3, putative\tLmjF18.0270\tmRNA\ttaxon:347515\t20100222\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_180270.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_180270.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0830\tLmjF.18.0830\t\tGO:0030515\tGO_REF:0000012\tISA\tUniProtKB:PWP2_YEAST\tF\tPeriodic tryptophan protein 2 homolog, putative\tLmjF18.0830\tmRNA\ttaxon:347515\t20140918\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PWP2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PWP2_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0830\tLmjF.18.0830\t\tGO:0032040\tGO_REF:0000012\tISA\tUniProtKB:PWP2_YEAST\tC\tPeriodic tryptophan protein 2 homolog, putative\tLmjF18.0830\tmRNA\ttaxon:347515\t20140918\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PWP2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PWP2_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0830\tLmjF.18.0830\t\tGO:0034388\tGO_REF:0000012\tISA\tUniProtKB:PWP2_YEAST\tC\tPeriodic tryptophan protein 2 homolog, putative\tLmjF18.0830\tmRNA\ttaxon:347515\t20140918\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PWP2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PWP2_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0990\tLmjF.18.0990\t\tGO:0020015\tGO_REF:0000002\tISO\tGeneDB:Tb.927.10.13130\tC\tUDP-glucose pyrophosphorylase\tLmjF18.0990\tmRNA\ttaxon:347515\t20110318\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb.927.10.13130 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb.927.10.13130", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.0990\tLmjF.18.0990\t\tGO:0046872\tGO_REF:0000002\tISO\tGeneDB:Tb.927.10.13130\tF\tUDP-glucose pyrophosphorylase\tLmjF18.0990\tmRNA\ttaxon:347515\t20110318\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Tb.927.10.13130 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Tb.927.10.13130", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1110\tLmjF.18.1110\t\tGO:0030488\tGO_REF:0000012\tISA\tUniProtKB:NCL1_YEAST\tP\tMultisite-specific tRNA:(cytosine-C(5))-methyltransferase, putative\tLmjF18.1110\tmRNA\ttaxon:347515\t20140918\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NCL1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NCL1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1660\tGSH1\t\tGO:0000302\tPMID:19818018|GO_REF:0000024\tISO\tGeneDB:Tb927.10.12370|GeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase, putative\tLmjF18.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj18_V3.1660 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj18_V3.1660", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1660\tGSH1\t\tGO:0006750\tPMID:19818018|GO_REF:0000024\tISO\tGeneDB:Tb927.10.12370|GeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase, putative\tLmjF18.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj18_V3.1660 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj18_V3.1660", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.18.1660\tGSH1\t\tGO:0019342\tPMID:19818018|GO_REF:0000024\tISO\tGeneDB:Tb927.10.12370|GeneDB:Linj18_V3.1660\tP\tgamma-glutamylcysteine synthetase, putative\tLmjF18.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj18_V3.1660 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj18_V3.1660", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0190\tmbf1\t\tGO:0003713\tGO_REF:0000002\tISS\tUniProtKB:MBF1_YEAST\tF\tmultiprotein-bridging factor 1, putative\tLmjF19.0190\tmRNA\ttaxon:347515\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MBF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MBF1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.19.0190\tmbf1\t\tGO:0045944\tGO_REF:0000002\tISS\tUniProtKB:MBF1_YEAST\tP\tmultiprotein-bridging factor 1, putative\tLmjF19.0190\tmRNA\ttaxon:347515\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: MBF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:MBF1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0460\tLmjF.20.0460\t\tGO:0032880\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tP\tTransmembrane protein 231, putative\tLmjF20.0460\tmRNA\ttaxon:347515\t20140801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TM231_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TM231_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0460\tLmjF.20.0460\t\tGO:0035869\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tC\tTransmembrane protein 231, putative\tLmjF20.0460\tmRNA\ttaxon:347515\t20140801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TM231_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TM231_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0460\tLmjF.20.0460\t\tGO:0060170\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tC\tTransmembrane protein 231, putative\tLmjF20.0460\tmRNA\ttaxon:347515\t20140801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TM231_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TM231_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0460\tLmjF.20.0460\t\tGO:0060271\tGO_REF:0000012\tISA\tUniProtKB:TM231_MOUSE\tP\tTransmembrane protein 231, putative\tLmjF20.0460\tmRNA\ttaxon:347515\t20140801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TM231_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TM231_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0560\tLmjF.20.0560\t\tGO:0003883\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.1.1240|GeneDB:GeneDB:Tb927.1.1240\tF\tcytidine triphosphate synthase, putative\tLmjF20.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GeneDB:Tb927.1.1240 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:GeneDB:Tb927.1.1240", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0560\tLmjF.20.0560\t\tGO:0006241\tPMID:20382188|GO_REF:0000024\tISO\tGeneDB:Tb927.1.1240|GeneDB:GeneDB:Tb927.1.1240\tP\tcytidine triphosphate synthase, putative\tLmjF20.0560\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GeneDB:Tb927.1.1240 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:GeneDB:Tb927.1.1240", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0770\tLmjF.20.0770\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tSTE group serine/threonine-protein kinase, putative\tLmjF20.0770\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0770\tLmjF.20.0770\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tSTE group serine/threonine-protein kinase, putative\tLmjF20.0770\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0770\tLmjF.20.0770\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tSTE group serine/threonine-protein kinase, putative\tLmjF20.0770\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0840\tLmjF.20.0840\t\tGO:0005507\tGO_REF:0000012\tISA\tUniProtKB:SCO2_HUMAN\tF\tcytochrome c oxidase assembly factor, putative\tLmjF20.0840\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SCO2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SCO2_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0840\tLmjF.20.0840\t\tGO:0005739\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.1.1580|UniProtKB:SCO2_HUMAN\tC\tcytochrome c oxidase assembly factor, putative\tLmjF20.0840\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SCO2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SCO2_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.0840\tLmjF.20.0840\t\tGO:0008535\tGO_REF:0000012\tISA\tUniProtKB:SCO2_HUMAN\tP\tcytochrome c oxidase assembly factor, putative\tLmjF20.0840\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SCO2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SCO2_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1140\tLmjF.20.1140\t\tGO:0005789\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\tLmjF20.1140\tmRNA\ttaxon:347515\t20140812\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: YIF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:YIF1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1140\tLmjF.20.1140\t\tGO:0006888\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tP\tprotein transport protein YIF1, putative\tLmjF20.1140\tmRNA\ttaxon:347515\t20140812\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: YIF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:YIF1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1140\tLmjF.20.1140\t\tGO:0030134\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\tLmjF20.1140\tmRNA\ttaxon:347515\t20140812\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: YIF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:YIF1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1140\tLmjF.20.1140\t\tGO:0030173\tGO_REF:0000012\tISA\tUniProtKB:YIF1_YEAST\tC\tprotein transport protein YIF1, putative\tLmjF20.1140\tmRNA\ttaxon:347515\t20140812\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: YIF1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:YIF1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.20.1640\tSGT1\t\tGO:0000151\tGO_REF:0000012\tISA\tUniProtKB:SGT1_YEAST\tC\tSuppressor of G2 allele of SKP1, putative\tLmjF20.1640\tmRNA\ttaxon:347515\t20140818\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SGT1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SGT1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0000310\tGO_REF:0000024\tISO\tGeneDB:LdBPK_210990.1\tF\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20180206\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_210990.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_210990.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.21.0850\tXPRT\t\tGO:0004422\tGO_REF:0000024\tISO\tGeneDB:LdBPK_210990.1\tF\txanthine phosphoribosyltransferase\tLmjF21.0850\tmRNA\ttaxon:347515\t20180206\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_210990.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_210990.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1360\tFPPS\t\tGO:0004161\tGO_REF:0000002\tISS\tUniProtKB:FPPS_YEAST\tF\tfarnesyl pyrophosphate synthase\tLmjF22.1360\tmRNA\ttaxon:347515\t20100921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FPPS_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FPPS_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1360\tFPPS\t\tGO:0004337\tGO_REF:0000002\tISS\tUniProtKB:FPPS_YEAST\tF\tfarnesyl pyrophosphate synthase\tLmjF22.1360\tmRNA\ttaxon:347515\t20100921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FPPS_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FPPS_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.22.1360\tFPPS\t\tGO:0045337\tGO_REF:0000002\tISS\tUniProtKB:FPPS_YEAST\tP\tfarnesyl pyrophosphate synthase\tLmjF22.1360\tmRNA\ttaxon:347515\t20100921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FPPS_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FPPS_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0160\tLmjF.23.0160\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\tLmjF23.0160\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0160\tLmjF.23.0160\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\tLmjF23.0160\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.0160\tLmjF.23.0160\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\thypothetical protein, conserved\tLmjF23.0160\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.23.1510\tVAa\t\tGO:0000331\tPMID:21437209\tISO\tUniProtKB:VATM_DICDI\tC\tvacuolar proton translocating ATPase subunit A, putative\tLmjF23.1510\tmRNA\ttaxon:347515\t20150313\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: VATM_DICDI does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:VATM_DICDI", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1630\tSDH1\t\tGO:0000104\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01812\tF\tSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial\tLmjF24.1630\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01812", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1630\tSDH1\t\tGO:0006099\tGO_REF:0000011\tISM\tJCVI_TIGRFAMS:TIGR01812\tP\tSuccinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial\tLmjF24.1630\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: JCVI_TIGRFAMS not found in list of database names in dbxrefs", "obj": "JCVI_TIGRFAMS:TIGR01812", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1720\tCDC20\t\tGO:0000278\tGO_REF:0000024\tISO\tGeneDB:LdBPK_241790.1\tP\tcell division cycle protein 20, putative\tLmjF24.1720\tmRNA\ttaxon:347515\t20150312\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_241790.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_241790.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.1720\tCDC20\t\tGO:0051726\tGO_REF:0000024\tISO\tGeneDB:LdBPK_241790.1\tP\tcell division cycle protein 20, putative\tLmjF24.1720\tmRNA\ttaxon:347515\t20150312\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_241790.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_241790.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2110\tHMGS\t\tGO:0004421\tGO_REF:0000012\tISA\tUniProtKB:HMCS_YEAST\tF\t3-hydroxy-3-methylglutaryl-CoA synthase, putative\tLmjF24.2110\tmRNA\ttaxon:347515\t20140808\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HMCS_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HMCS_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.24.2110\tHMGS\t\tGO:0006696\tGO_REF:0000012\tISA\tUniProtKB:HMCS_YEAST\tP\t3-hydroxy-3-methylglutaryl-CoA synthase, putative\tLmjF24.2110\tmRNA\ttaxon:347515\t20140808\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: HMCS_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:HMCS_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.0530\tABCT\t\tGO:0016021\tPMID:11152613\tISM\tCBS:TMHMM\tC\tABC transporter, mitochondrial, putative\tLmjF25.0530\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBS not found in list of database names in dbxrefs", "obj": "CBS:TMHMM", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1120\tALDH2\t\tGO:0004029\tPMID:7630384|PMID:19497128\tISO\tGeneDB:LtaP25.1180\tF\taldehyde dehydrogenase, mitochondrial precursor\tLmjF25.1120\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LtaP25.1180 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LtaP25.1180", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1120\tALDH2\t\tGO:0046164\tPMID:7630384|PMID:19497128\tISO\tGeneDB:LtaP25.1180\tP\taldehyde dehydrogenase, mitochondrial precursor\tLmjF25.1120\tmRNA\ttaxon:347515\t20090731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LtaP25.1180 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LtaP25.1180", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1150\tLmjF.25.1150\t\tGO:0006473\tGO_REF:0000002\tISA\tUniProtKB:ATAT1_CAEEL\tP\talpha-tubulin N-acetyltransferase, putative\tLmjF25.1150\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ATAT1_CAEEL does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ATAT1_CAEEL", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1150\tLmjF.25.1150\t\tGO:0019799\tGO_REF:0000002\tISA\tUniProtKB:ATAT1_CAEEL\tF\talpha-tubulin N-acetyltransferase, putative\tLmjF25.1150\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ATAT1_CAEEL does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ATAT1_CAEEL", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1810\tLmjF.25.1810\t\tGO:0033617\tPMID:18776036|GO_REF:0000024\tISO\tGeneDB:Tb927.3.1890|GeneDB:TbTb927.3.1890\tP\tcytochrome c oxidase assembly protein, putative\tLmjF25.1810\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TbTb927.3.1890 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:TbTb927.3.1890", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1810\tLmjF.25.1810\t\tGO:0070069\tPMID:18776036|GO_REF:0000024\tISO\tGeneDB:Tb927.3.1890|GeneDB:TbTb927.3.1890\tC\tcytochrome c oxidase assembly protein, putative\tLmjF25.1810\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TbTb927.3.1890 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:TbTb927.3.1890", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1900\tPPCS\t\tGO:0004632\tGO_REF:0000012\tISA\tUniProtKB:PPCS_HUMAN\tF\tphosphopantothenate--cysteine ligase, putative\tLmjF25.1900\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PPCS_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PPCS_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1900\tPPCS\t\tGO:0015937\tGO_REF:0000012\tISA\tUniProtKB:PPCS_YEAST|UniProtKB:PPCS_HUMAN\tP\tphosphopantothenate--cysteine ligase, putative\tLmjF25.1900\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PPCS_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PPCS_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1900\tPPCS\t\tGO:0015937\tGO_REF:0000012\tISA\tUniProtKB:PPCS_YEAST|UniProtKB:PPCS_HUMAN\tP\tphosphopantothenate--cysteine ligase, putative\tLmjF25.1900\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PPCS_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PPCS_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.1900\tPPCS\t\tGO:0070062\tGO_REF:0000012\tISA\tUniProtKB:PPCS_HUMAN\tC\tphosphopantothenate--cysteine ligase, putative\tLmjF25.1900\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PPCS_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PPCS_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2080\tLmjF.25.2080\t\tGO:0003924\tGO_REF:0000012\tISA\tUniProtKB:ETUD1_HUMAN\tF\telongation factor 2-like protein\tLmjF25.2080\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ETUD1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ETUD1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.25.2080\tLmjF.25.2080\t\tGO:0042256\tGO_REF:0000012\tISA\tUniProtKB:ETUD1_HUMAN\tP\telongation factor 2-like protein\tLmjF25.2080\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ETUD1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ETUD1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1620\tCDS\t\tGO:0004605\tGO_REF:0000024\tISO\tUniProtKB:CDS1_YEAST|GeneDB:Tb927.7.220\tF\tCDP-DAG synthase, putative\tLmjF26.1620\tmRNA\ttaxon:347515\t20140805\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CDS1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CDS1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.1620\tCDS\t\tGO:0016024\tGO_REF:0000024\tISO\tUniProtKB:CDS1_YEAST|GeneDB:Tb927.7.220\tP\tCDP-DAG synthase, putative\tLmjF26.1620\tmRNA\ttaxon:347515\t20140805\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CDS1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CDS1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0000152\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0005634\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0006302\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tP\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0008237\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tF\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0031593\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tF\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0070531\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0070536\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tP\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.26.2430\tLmjF.26.2430\t\tGO:0070552\tGO_REF:0000002\tISS\tUniProtKB:BRCC3_HUMAN\tC\tLys-63-specific deubiquitinase BRCC36, putative\tLmjF26.2430\tmRNA\ttaxon:347515\t20130904\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BRCC3_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BRCC3_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1480\tLmjF.27.1480\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF27.1480\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1480\tLmjF.27.1480\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF27.1480\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1480\tLmjF.27.1480\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF27.1480\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1620\tEIF4E1\t\tGO:0005515\tPMID:21764780\tIPI\tGeneDB:LmjF35.3980\tF\tEukaryotic translation initiation factor 4E-1\tLmjF27.1620\tmRNA\ttaxon:347515\t20120720\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LmjF35.3980 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LmjF35.3980", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1730\tLmjF.27.1730\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LdBPK_271630.1\tC\tFlabarin, putative\tLmjF27.1730\tmRNA\ttaxon:347515\t20171122\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_271630.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_271630.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1780\tCK1.4\t\tGO:0004674\tPMID:24260187\tISO\tGeneDB:LdBPK_271680.1\tF\tcasein kinase I-like protein\tLmjF27.1780\tmRNA\ttaxon:347515\t20190617\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_271680.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_271680.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.27.1780\tCK1.4\t\tGO:0005829\tPMID:24260187\tISO\tGeneDB:LdBPK_271680.1\tC\tcasein kinase I-like protein\tLmjF27.1780\tmRNA\ttaxon:347515\t20190617\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_271680.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_271680.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0000724\tGO_REF:0000002\tISA\tUniProtKB:RAD51_HUMAN\tP\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20130913\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RAD51_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RAD51_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0550\tRAD51\t\tGO:0005524\tGO_REF:0000002\tISS\tUniProtKB:RAD51_HUMAN|InterPro:IPR011941\tF\tDNA repair protein RAD51, putative\tLmjF28.0550\tmRNA\ttaxon:347515\t20101118\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RAD51_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RAD51_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0980\tP27\t\tGO:0002082\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tP\tP27 protein, putative\tLmjF28.0980\tmRNA\ttaxon:347515\t20100614\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj28_V3.1070 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj28_V3.1070", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0980\tP27\t\tGO:0005743\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tC\tP27 protein, putative\tLmjF28.0980\tmRNA\ttaxon:347515\t20100614\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj28_V3.1070 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj28_V3.1070", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.0980\tP27\t\tGO:0070069\tPMID:20497506\tISO\tGeneDB:Linj28_V3.1070\tC\tP27 protein, putative\tLmjF28.0980\tmRNA\ttaxon:347515\t20100614\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj28_V3.1070 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj28_V3.1070", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0005739\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tC\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NDUAD_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NDUAD_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0005747\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tC\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NDUAD_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NDUAD_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0030308\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tP\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NDUAD_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NDUAD_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0045039\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tP\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NDUAD_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NDUAD_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0072593\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tP\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NDUAD_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NDUAD_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.28.2030\tLmjF.28.2030\t\tGO:0097190\tGO_REF:0000012\tISA\tUniProtKB:NDUAD_HUMAN\tP\tNADH dehydrogenase subunit NB6M, putative\tLmjF28.2030\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: NDUAD_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:NDUAD_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0005634\tGO_REF:0000002\tISA\tUniProtKB:UBX5_YEAST\tC\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UBX5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UBX5_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0005737\tGO_REF:0000002\tISA\tUniProtKB:UBX5_YEAST\tC\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UBX5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UBX5_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0031625\tGO_REF:0000002\tISA\tUniProtKB:UBXN7_HUMAN\tF\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UBXN7_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UBXN7_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0340\tLmjF.29.0340\t\tGO:0043130\tGO_REF:0000002\tISA\tUniProtKB:UBXN7_HUMAN\tF\tUBX domain-containing protein\tLmjF29.0340\tmRNA\ttaxon:347515\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: UBXN7_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:UBXN7_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0680\tTRRM3\t\tGO:0003723\tGO_REF:0000024\tISO\tInterPro:IPR000504|UniProtKB:SGN1_YEAST|GeneDB:Tb927.3.3670\tF\tTriple RNA binding domain protein 3\tLmjF29.0680\tmRNA\ttaxon:347515\t20150602\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SGN1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SGN1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0005886\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tC\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20140227\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0008283\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20140227\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0020018\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tC\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20140227\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0044782\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20160921\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0046903\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tP\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20140227\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.0880\tarl3a\t\tGO:0060170\tGO_REF:0000024\tISO\tGeneDB:LdBPK_290950.1\tC\tADP-ribosylation factor-like protein 3A, putative\tLmjF29.0880\tmRNA\ttaxon:347515\t20140227\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_290950.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_290950.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1040\tFLAM6\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042|SMART:SM00100\tF\tFlagellar Member 6\tLmjF29.1040\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1040\tFLAM6\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042|SMART:SM00100\tF\tFlagellar Member 6\tLmjF29.1040\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.1040\tFLAM6\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042|SMART:SM00100\tF\tFlagellar Member 6\tLmjF29.1040\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0000727\tGO_REF:0000012\tISA\tUniProtKB:SLD5_YEAST\tP\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SLD5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SLD5_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0005634\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.3.4810|UniProtKB:SLD5_MOUSE\tC\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SLD5_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SLD5_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0005737\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.3.4810|UniProtKB:SLD5_MOUSE\tC\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SLD5_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SLD5_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.29.2260\tLmjF.29.2260\t\tGO:0006261\tGO_REF:0000012\tISA\tUniProtKB:SLD5_YEAST\tP\tDNA replication complex GINS protein SLD5, putative\tLmjF29.2260\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: SLD5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:SLD5_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0405\tLmjF.30.0405\t\tGO:0006487\tGO_REF:0000002\tISA\tUniProtKB:CAX4_YEAST\tP\tdolichyl pyrophosphate phosphatase, putative\tLmjF30.0405\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CAX4_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CAX4_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0405\tLmjF.30.0405\t\tGO:0030176\tGO_REF:0000002\tISA\tUniProtKB:CAX4_YEAST\tC\tdolichyl pyrophosphate phosphatase, putative\tLmjF30.0405\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CAX4_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CAX4_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.0405\tLmjF.30.0405\t\tGO:0047874\tGO_REF:0000002\tISA\tUniProtKB:CAX4_YEAST\tF\tdolichyl pyrophosphate phosphatase, putative\tLmjF30.0405\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CAX4_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CAX4_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1540\tPPCDC\t\tGO:0004633\tGO_REF:0000024\tISS\tUniProtKB:COAC_HUMAN\tF\tphosphopantothenoylcysteine decarboxylase, putative\tLmjF30.1540\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: COAC_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:COAC_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1540\tPPCDC\t\tGO:0015937\tGO_REF:0000024\tISS\tUniProtKB:COAC_HUMAN\tP\tphosphopantothenoylcysteine decarboxylase, putative\tLmjF30.1540\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: COAC_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:COAC_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.1610\tFR1\t\tGO:0005886\tGO_REF:0000012\tISA\tGB:AEG66929\tC\tferric reductase transmembrane protein, putative\tLmjF30.1610\tmRNA\ttaxon:347515\t20141203\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GB not found in list of database names in dbxrefs", "obj": "GB:AEG66929", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2170\tLmjF.30.2170\t\tGO:0004842\tGO_REF:0000012\tISA\tUniProtKB:ARI2_HUMAN\tF\tE3 ubiquitin-protein ligase, putative\tLmjF30.2170\tmRNA\ttaxon:347515\t20130812\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ARI2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ARI2_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2170\tLmjF.30.2170\t\tGO:0070936\tGO_REF:0000012\tISA\tUniProtKB:ARI2_HUMAN\tP\tE3 ubiquitin-protein ligase, putative\tLmjF30.2170\tmRNA\ttaxon:347515\t20150217\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ARI2_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ARI2_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0000214\tGO_REF:0000012\tISA\tUniProtKB:CLP1_HUMAN\tC\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CLP1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CLP1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0005730\tGO_REF:0000012\tISA\tUniProtKB:CLP1_HUMAN\tC\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CLP1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CLP1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0006388\tGO_REF:0000012\tISA\tUniProtKB:CLP1_HUMAN\tP\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CLP1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CLP1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0030423\tGO_REF:0000012\tISA\tUniProtKB:CLP1_HUMAN\tP\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CLP1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CLP1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2410\tCLP1\t\tGO:0051736\tGO_REF:0000012\tISA\tUniProtKB:CLP1_HUMAN\tF\tpre-mRNA cleavage complex II Clp1 protein, putative\tLmjF30.2410\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CLP1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CLP1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2740\tSGT\t\tGO:0005829\tPMID:19953351\tISO\tGeneDB:Linj30_V3.2470\tC\tsmall glutamine-rich tetratricopeptide repeat protein, putative\tLmjF30.2740\tmRNA\ttaxon:347515\t20100204\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj30_V3.2470 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj30_V3.2470", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.30.2740\tSGT\t\tGO:0051087\tPMID:19953351\tISO\tGeneDB:Linj30_V3.2470\tF\tsmall glutamine-rich tetratricopeptide repeat protein, putative\tLmjF30.2740\tmRNA\ttaxon:347515\t20100204\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj30_V3.2470 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj30_V3.2470", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0830\tLmjF.31.0830\t\tGO:0016298\tGO_REF:0000002\tISO\tGeneDB:LdBPK_310860.1\tF\tlipase, putative\tLmjF31.0830\tmRNA\ttaxon:347515\t20100513\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_310860.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_310860.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.0830\tLmjF.31.0830\t\tGO:0043657\tGO_REF:0000002\tISO\tGeneDB:LdBPK_310860.1\tC\tlipase, putative\tLmjF31.0830\tmRNA\ttaxon:347515\t20100513\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_310860.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_310860.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1660\tLmjF.31.1660\t\tGO:0000790\tGO_REF:0000012\tISA\tUniProtKB:PSF3_SCHPO\tC\tGINS complex subunit Psf3, putative\tLmjF31.1660\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PSF3_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PSF3_SCHPO", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1660\tLmjF.31.1660\t\tGO:0006270\tGO_REF:0000024|GO_REF:0000012\tISO\tGeneDB:Tb927.4.4680|UniProtKB:PSF3_SCHPO\tP\tGINS complex subunit Psf3, putative\tLmjF31.1660\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PSF3_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PSF3_SCHPO", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1660\tLmjF.31.1660\t\tGO:0071163\tGO_REF:0000012\tISA\tUniProtKB:PSF3_SCHPO\tP\tGINS complex subunit Psf3, putative\tLmjF31.1660\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PSF3_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PSF3_SCHPO", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1660\tLmjF.31.1660\t\tGO:0071165\tGO_REF:0000012\tISA\tUniProtKB:PSF3_SCHPO\tP\tGINS complex subunit Psf3, putative\tLmjF31.1660\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PSF3_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PSF3_SCHPO", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1780\tDHCS\t\tGO:0046513\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tP\tSphingosine N-acyltransferase, putative\tLmjF31.1780\tmRNA\ttaxon:347515\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LAG1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LAG1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1780\tDHCS\t\tGO:0050291\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tF\tSphingosine N-acyltransferase, putative\tLmjF31.1780\tmRNA\ttaxon:347515\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LAG1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LAG1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.1780\tDHCS\t\tGO:0061576\tGO_REF:0000002\tISA\tUniProtKB:LAG1_YEAST\tC\tSphingosine N-acyltransferase, putative\tLmjF31.1780\tmRNA\ttaxon:347515\t20150408\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LAG1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:LAG1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.31.2940\tLmjF.31.2940\t\tGO:0006696\tGO_REF:0000002\tISA\tUniProtKB:FDFT_YEAST\tP\tsqualene synthase, putative\tLmjF31.2940\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FDFT_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FDFT_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0003723\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tF\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BFR1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BFR1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0007088\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tP\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BFR1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BFR1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0007126\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tP\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BFR1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BFR1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0030529\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tC\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BFR1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BFR1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.0020\tLmjF.32.0020\t\tGO:0042175\tGO_REF:0000002\tISA\tUniProtKB:BFR1_YEAST\tC\tnuclear segregation protein, putative\tLmjF32.0020\tmRNA\ttaxon:347515\t20130911\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BFR1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BFR1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1240\tBBS9\t\tGO:0020018\tGO_REF:0000024\tISO\tGeneDB:GeneDB:Tb927.11.14470\tC\tBardet-Biedl syndrome 9 protein\tLmjF32.1240\tmRNA\ttaxon:347515\t20160715\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GeneDB:Tb927.11.14470 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:GeneDB:Tb927.11.14470", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.1970\ttsr3\t\tGO:0030490\tGO_REF:0000002\tISS\tUniProtKB:TSR3_YEAST\tP\tribosome biogenesis protein TSR3, putative\tLmjF32.1970\tmRNA\ttaxon:347515\t20140313\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: TSR3_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:TSR3_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2530\tLmjF.32.2530\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF32.2530\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2530\tLmjF.32.2530\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF32.2530\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2530\tLmjF.32.2530\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF32.2530\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2900\tDC2\t\tGO:0005858\tGO_REF:0000002\tISO\tGeneDB:LdBPK_323050.1\tC\touter dynein arm docking complex, putative\tLmjF32.2900\tmRNA\ttaxon:347515\t20100422\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_323050.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_323050.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.2900\tDC2\t\tGO:0070286\tGO_REF:0000002\tISO\tGeneDB:LdBPK_323050.1\tP\touter dynein arm docking complex, putative\tLmjF32.2900\tmRNA\ttaxon:347515\t20100422\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_323050.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_323050.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3870\tMYO13\t\tGO:0005929\tGO_REF:0000024\tISO\tGeneDB:LdBPK_324020.1\tC\tmyosin XXI, putative\tLmjF32.3870\tmRNA\ttaxon:347515\t20150311\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_324020.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_324020.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3970\tCARP1\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP response protein 1, putative\tLmjF32.3970\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3970\tCARP1\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP response protein 1, putative\tLmjF32.3970\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.32.3970\tCARP1\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP response protein 1, putative\tLmjF32.3970\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1700\tISWI\t\tGO:0005524\tGO_REF:0000024\tISS\tUniProtKB:Q9DF71_XENLA|InterPro:IPR001410\tF\tISWI complex protein\tLmjF33.1700\tmRNA\ttaxon:347515\t20140507\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q9DF71_XENLA does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q9DF71_XENLA", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1895\tfopnl\t\tGO:0031514\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_MOUSE\tC\tLisH domain-containing protein FOPNL, putative\tLmjF33.1895|for20\tmRNA\ttaxon:347515\t20140424\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FOPNL_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FOPNL_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1895\tfopnl\t\tGO:0036064\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_MOUSE\tC\tLisH domain-containing protein FOPNL, putative\tLmjF33.1895|for20\tmRNA\ttaxon:347515\t20140424\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FOPNL_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FOPNL_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1895\tfopnl\t\tGO:0060271\tGO_REF:0000002\tISS\tUniProtKB:FOPNL_HUMAN\tP\tLisH domain-containing protein FOPNL, putative\tLmjF33.1895|for20\tmRNA\ttaxon:347515\t20140424\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: FOPNL_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:FOPNL_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1910\tLmjF.33.1910\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3070|UniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tC\tribosome assembly protein RRB1, putative\tLmjF33.1910\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RRB1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RRB1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1910\tLmjF.33.1910\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:Tb927.11.3070|UniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tC\tribosome assembly protein RRB1, putative\tLmjF33.1910\tmRNA\ttaxon:347515\t20190510\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RRB1_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RRB1_SCHPO", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1910\tLmjF.33.1910\t\tGO:0042254\tGO_REF:0000002\tISA\tUniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tP\tribosome assembly protein RRB1, putative\tLmjF33.1910\tmRNA\ttaxon:347515\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RRB1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RRB1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.33.1910\tLmjF.33.1910\t\tGO:0042254\tGO_REF:0000002\tISA\tUniProtKB:RRB1_YEAST|UniProtKB:RRB1_SCHPO\tP\tribosome assembly protein RRB1, putative\tLmjF33.1910\tmRNA\ttaxon:347515\t20130909\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: RRB1_SCHPO does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:RRB1_SCHPO", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0330\tDHS34\t\tGO:0034038\tPMID:19880510\tISO\tGeneDB:Linj34_V3.0350\tF\tdeoxyhypusine synthase\tLmjF34.0330\tmRNA\ttaxon:347515\t20091109\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj34_V3.0350 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj34_V3.0350", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0330\tDHS34\t\tGO:0043687\tPMID:19880510\tISO\tGeneDB:Linj34_V3.0350\tP\tdeoxyhypusine synthase\tLmjF34.0330\tmRNA\ttaxon:347515\t20091109\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Linj34_V3.0350 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:Linj34_V3.0350", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0890\tLmjF.34.0890\t\tGO:0003677\tGO_REF:0000002\tISO\tGeneDB:927.4.3490\tF\tDNA-directed RNA polymerase III subunit, putative\tLmjF34.0890\tmRNA\ttaxon:347515\t20110425\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: 927.4.3490 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:927.4.3490", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0890\tLmjF.34.0890\t\tGO:0003899\tPMID:16246139\tISO\tGeneDB:927.4.3490\tF\tDNA-directed RNA polymerase III subunit, putative\tLmjF34.0890\tmRNA\ttaxon:347515\t20110425\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: 927.4.3490 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:927.4.3490", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0890\tLmjF.34.0890\t\tGO:0006351\tPMID:16246139\tISO\tGeneDB:927.4.3490\tP\tDNA-directed RNA polymerase III subunit, putative\tLmjF34.0890\tmRNA\ttaxon:347515\t20101117\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: 927.4.3490 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:927.4.3490", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.0940\tWEE1\t\tGO:0045736\tGO_REF:0000002\tISS\tUniProtKB:WEE2_MOUSE\tP\tWee1-like protein kinase, putative\tLmjF34.0940\tmRNA\ttaxon:347515\t20131122\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: WEE2_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:WEE2_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2290\tTWF\t\tGO:0000022\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tP\ttwinfilin\tLmjF34.2290\tmRNA\ttaxon:347515\t20160105\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_342060.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_342060.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2290\tTWF\t\tGO:0005730\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tC\ttwinfilin\tLmjF34.2290\tmRNA\ttaxon:347515\t20160105\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_342060.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_342060.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2290\tTWF\t\tGO:0036064\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tC\ttwinfilin\tLmjF34.2290\tmRNA\ttaxon:347515\t20160105\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_342060.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_342060.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2290\tTWF\t\tGO:0072686\tGO_REF:0000024\tISO\tGeneDB:LdBPK_342060.1\tC\ttwinfilin\tLmjF34.2290\tmRNA\ttaxon:347515\t20160105\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_342060.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_342060.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2420\tLmjF.34.2420\t\tGO:0004378\tGO_REF:0000012\tISA\tUniProtKB:ALG2_YEAST\tF\tdolichyl-P-Man:GDP-Man1GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF34.2420\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ALG2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ALG2_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2420\tLmjF.34.2420\t\tGO:0006490\tGO_REF:0000012\tISA\tUniProtKB:ALG2_YEAST\tP\tdolichyl-P-Man:GDP-Man1GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF34.2420\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ALG2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ALG2_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2420\tLmjF.34.2420\t\tGO:0033164\tGO_REF:0000012\tISA\tUniProtKB:ALG2_YEAST\tF\tdolichyl-P-Man:GDP-Man1GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase, putative\tLmjF34.2420\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: ALG2_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:ALG2_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2730\tGPI16\t\tGO:0003923\tPMID:20382188\tISS\tUniProtKB:GPI16_YEAST\tF\tGPI transamidase subunit 16, putative\tLmjF34.2730\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GPI16_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GPI16_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2730\tGPI16\t\tGO:0016255\tPMID:20382188\tISS\tUniProtKB:GPI16_YEAST\tP\tGPI transamidase subunit 16, putative\tLmjF34.2730\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GPI16_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GPI16_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2730\tGPI16\t\tGO:0042765\tPMID:20382188\tISS\tUniProtKB:GPI16_YEAST\tC\tGPI transamidase subunit 16, putative\tLmjF34.2730\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: GPI16_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:GPI16_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2810\tLmjF.34.2810\t\tGO:0004181\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, Family M14\tLmjF34.2810\tmRNA\ttaxon:347515\t20120621\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBPC1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CBPC1_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2810\tLmjF.34.2810\t\tGO:0005524\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, Family M14\tLmjF34.2810\tmRNA\ttaxon:347515\t20120621\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBPC1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CBPC1_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2810\tLmjF.34.2810\t\tGO:0005829\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tC\tmetallo-peptidase, Clan MC, Family M14\tLmjF34.2810\tmRNA\ttaxon:347515\t20120621\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBPC1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CBPC1_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2810\tLmjF.34.2810\t\tGO:0008270\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, Family M14\tLmjF34.2810\tmRNA\ttaxon:347515\t20120621\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBPC1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CBPC1_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2810\tLmjF.34.2810\t\tGO:0043531\tPMID:17244817\tISO\tUniProtKB:CBPC1_MOUSE\tF\tmetallo-peptidase, Clan MC, Family M14\tLmjF34.2810\tmRNA\ttaxon:347515\t20120621\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CBPC1_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CBPC1_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2820\tLmjF.34.2820\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tregulatory subunit of protein kinase a-like protein\tLmjF34.2820\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2820\tLmjF.34.2820\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tregulatory subunit of protein kinase a-like protein\tLmjF34.2820\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.2820\tLmjF.34.2820\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tregulatory subunit of protein kinase a-like protein\tLmjF34.2820\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3250\tLmjF.34.3250\t\tGO:0004737\tGO_REF:0000024\tISA\tUniProtKB:PDC5_YEAST\tF\tAlpha-keto-acid decarboxylase, putative\tLmjF34.3250\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PDC5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PDC5_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.3250\tLmjF.34.3250\t\tGO:0006090\tGO_REF:0000024\tISA\tUniProtKB:PDC5_YEAST\tP\tAlpha-keto-acid decarboxylase, putative\tLmjF34.3250\tmRNA\ttaxon:347515\t20140610\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PDC5_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PDC5_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4620\tLmjF.34.4620\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF34.4620\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4620\tLmjF.34.4620\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF34.4620\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.34.4620\tLmjF.34.4620\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcyclic nucleotide-binding domain containing protein, putative\tLmjF34.4620\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.0950\tLmjF.35.0950\t\tGO:0051219\tPMID:15470247\tISO\tUniProtKB:Q643Z2_CRIFA\tF\tcell cycle sequence binding phosphoprotein (RBP33), putative\tLmjF35.0950\tmRNA\ttaxon:347515\t20101102\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q643Z2_CRIFA does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q643Z2_CRIFA", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2930\tLmjF.35.2930\t\tGO:0004168\tGO_REF:0000012\tISA\tUniProtKB:DOLK_HUMAN\tF\tdolichol kinase, putative\tLmjF35.2930\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DOLK_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DOLK_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2930\tLmjF.35.2930\t\tGO:0030176\tGO_REF:0000012\tISA\tUniProtKB:DOLK_HUMAN\tC\tdolichol kinase, putative\tLmjF35.2930\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DOLK_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DOLK_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.2930\tLmjF.35.2930\t\tGO:0043048\tGO_REF:0000012\tISA\tUniProtKB:DOLK_HUMAN\tP\tdolichol kinase, putative\tLmjF35.2930\tmRNA\ttaxon:347515\t20140609\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: DOLK_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:DOLK_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3540\tPNO1\t\tGO:0005730\tGO_REF:0000012\tISA\tUniProtKB:PNO1_HUMAN\tC\tpre-rRNA-processing protein PNO1, putative\tLmjF35.3540\tmRNA\ttaxon:347515\t20140731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PNO1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PNO1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.3540\tPNO1\t\tGO:0044822\tGO_REF:0000012\tISA\tUniProtKB:PNO1_HUMAN\tF\tpre-rRNA-processing protein PNO1, putative\tLmjF35.3540\tmRNA\ttaxon:347515\t20140731\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PNO1_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PNO1_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.35.4470\tP23\t\tGO:0005737\tGO_REF:0000024\tISO\tGeneDB:LdBPK_354540.1\tC\tCo-chaperone protein P23\tLmjF35.4470|ACDP23A\tmRNA\ttaxon:347515\t20160801\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_354540.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_354540.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0250\tEIF3L\t\tGO:0003743\tGO_REF:0000012\tISA\tUniProtKB:EIF3L_HUMAN\tF\teukaryotic translation initiation factor 3 subunit l\tLmjF36.0250\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: EIF3L_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:EIF3L_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0250\tEIF3L\t\tGO:0006413\tGO_REF:0000012\tISA\tUniProtKB:EIF3L_HUMAN\tP\teukaryotic translation initiation factor 3 subunit l\tLmjF36.0250\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: EIF3L_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:EIF3L_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0710\tLmjF.36.0710\t\tGO:0005739\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tC\tProtein C21orf2 homolog, putative\tLmjF36.0710\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CU002_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CU002_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0710\tLmjF.36.0710\t\tGO:0007010\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tP\tProtein C21orf2 homolog, putative\tLmjF36.0710\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CU002_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CU002_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0710\tLmjF.36.0710\t\tGO:0008360\tGO_REF:0000002\tISA\tUniProtKB:CU002_HUMAN\tP\tProtein C21orf2 homolog, putative\tLmjF36.0710\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CU002_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CU002_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0710\tLmjF.36.0710\t\tGO:0060271\tGO_REF:0000002\tISA\tUniProtKB:CU002_MOUSE\tP\tProtein C21orf2 homolog, putative\tLmjF36.0710\tmRNA\ttaxon:347515\t20130910\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: CU002_MOUSE does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:CU002_MOUSE", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0830\tLmjF.36.0830\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP binding protein, putative\tLmjF36.0830\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00888 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00888", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0830\tLmjF.36.0830\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP binding protein, putative\tLmjF36.0830\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS00889 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS00889", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.0830\tLmjF.36.0830\t\tGO:0030551\tPMID:25724722\tISS\tPfam:PF00027|SMART:SM00100|Prosite:PS00888|Prosite:PS00889|Prosite:PS50042\tF\tcAMP binding protein, putative\tLmjF36.0830\tmRNA\ttaxon:347515\t20150413\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PS50042 does not match any id_syntax patterns for Prosite in dbxrefs", "obj": "Prosite:PS50042", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1940\tNT2\t\tGO:0005337\tGO_REF:0000024\tISO\tGeneDB:LdBPK_362040.1\tF\tinosine-guanosine transporter\tLmjF36.1940\tmRNA\ttaxon:347515\t20100819\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_362040.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_362040.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1940\tNT2\t\tGO:0006190\tGO_REF:0000024\tISO\tGeneDB:LdBPK_362040.1\tP\tinosine-guanosine transporter\tLmjF36.1940\tmRNA\ttaxon:347515\t20100819\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_362040.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_362040.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.1940\tNT2\t\tGO:0031226\tGO_REF:0000024\tISO\tGeneDB:LdBPK_362040.1\tC\tinosine-guanosine transporter\tLmjF36.1940\tmRNA\ttaxon:347515\t20100819\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: LdBPK_362040.1 does not match any id_syntax patterns for GeneDB in dbxrefs", "obj": "GeneDB:LdBPK_362040.1", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0034452\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0034464\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tC\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0043014\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.2280\tBBS4\t\tGO:0048487\tGO_REF:0000012\tISA\tUniProtKB:BBS4_HUMAN\tF\tbardet-biedl syndrome 4 protein\tLmjF36.2280\tmRNA\ttaxon:347515\t20140611\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BBS4_HUMAN does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BBS4_HUMAN", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3930\tTERT\t\tGO:0000333\tPMID:16416120\tISA\tUniProtKB:Q2NNR6_LEIAM\tC\ttelomerase reverse transcriptase, putative\tLmjF36.3930\tmRNA\ttaxon:347515\t20090805\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q2NNR6_LEIAM does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q2NNR6_LEIAM", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.3930\tTERT\t\tGO:0003721\tPMID:16416120\tISA\tUniProtKB:Q2NNR6_LEIAM\tF\ttelomerase reverse transcriptase, putative\tLmjF36.3930\tmRNA\ttaxon:347515\t20090805\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: Q2NNR6_LEIAM does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:Q2NNR6_LEIAM", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4070\tLmjF.36.4070\t\tGO:0004721\tGO_REF:0000002\tISA\tUniProtKB:PGAM5_DROME\tF\tphosphoglycerate mutase family member 5, putative\tLmjF36.4070\tmRNA\ttaxon:347515\t20140603\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PGAM5_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PGAM5_DROME", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.4070\tLmjF.36.4070\t\tGO:0043539\tGO_REF:0000002\tISA\tUniProtKB:PGAM5_DROME\tF\tphosphoglycerate mutase family member 5, putative\tLmjF36.4070\tmRNA\ttaxon:347515\t20140603\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: PGAM5_DROME does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:PGAM5_DROME", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5400\tLmjF.36.5400\t\tGO:0008320\tGO_REF:0000012\tISA\tUniProtKB:BCS1_YEAST\tF\tmitochondrial chaperone BCS1, putative\tLmjF36.5400\tmRNA\ttaxon:347515\t20141125\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BCS1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BCS1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 }, { "level": "WARNING", "line": "TriTrypDB\tLmjF.36.5400\tLmjF.36.5400\t\tGO:0032979\tGO_REF:0000012\tISA\tUniProtKB:BCS1_YEAST\tP\tmitochondrial chaperone BCS1, putative\tLmjF36.5400\tmRNA\ttaxon:347515\t20141125\tGeneDB\n", "type": "Invalid identifier", "message": "GORULE:0000027: BCS1_YEAST does not match any id_syntax patterns for UniProtKB in dbxrefs", "obj": "UniProtKB:BCS1_YEAST", "taxon": "NCBITaxon:347515", "rule": 27 } ] } }