{
    "group": "unknown",
    "dataset": "unknown",
    "lines": 889,
    "skipped_lines": 22,
    "associations": 864,
    "messages": {
        "other": [],
        "gorule-0000002": [],
        "gorule-0000005": [
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-5919104\tenables\tGO:0005515\tPMID:26754771\tECO:0000250\tUniProtKB:Q13501\t\t20231023\tXenbase\thas_input(Xenbase:XB-GENE-6251797)\tnoctua-model-id=gomodel:60418ffa00002271|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000005: IEA, ISS, ISO, ISM, ISA, IBA, RCA annotations ae not allowed for direct annotations to 'binding ; GO:0005488' or 'protein binding ; GO:0005515'",
                "obj": "",
                "taxon": "",
                "rule": 5
            }
        ],
        "gorule-0000006": [],
        "gorule-0000007": [],
        "gorule-0000008": [
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-919827\tacts_upstream_of_or_within\tGO:0048856\tPMID:32196547\tECO:0000315\t\t\t20220118\tXenbase\tresults_in_development_of(XAO:0003029)\tmodel-state=production|noctua-model-id=gomodel:61e0e55600000483|contributor=https://orcid.org/0000-0003-1074-8103\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            },
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-487200\tenables\tGO:0008134\tPMID:32894225\tECO:0006051\tXenbase:XB-MORPHOLINO-17249330\t\t20220613\tXenbase\tpart_of(GO:1904837)\tnoctua-model-id=gomodel:62900b6400001096|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000008: No annotations should be made to uninformatively high level terms",
                "obj": "",
                "taxon": "",
                "rule": 8
            }
        ],
        "gorule-0000011": [],
        "gorule-0000015": [],
        "gorule-0000016": [],
        "gorule-0000017": [],
        "gorule-0000018": [],
        "gorule-0000022": [],
        "gorule-0000026": [
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-6251681\tenables\tGO:0001968\tGO_REF:0000033\tECO:0000318\tUniProtKB:P34901\t\t20201118\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-489012\tenables\tGO:0003924\tGO_REF:0000033\tECO:0000318\tPANTHER:PTN000632671\t\t20201118\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-17331921\tenables\tGO:0005109\tGO_REF:0000033\tECO:0000318\tPANTHER:PTN000246517\t\t20201118\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-483735\tenables\tGO:0042813\tGO_REF:0000033\tECO:0000318\tPANTHER:PTN000139394\t\t20201118\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-865024\tenables\tGO:0005109\tGO_REF:0000033\tECO:0000318\tPANTHER:PTN000093831\t\t20201118\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-17331693\tenables\tGO:0003723\tGO_REF:0000033\tECO:0000318\tPANTHER:PTN000259535\t\t20201116\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-483735\tenables\tGO:0017147\tGO_REF:0000033\tECO:0000318\tPANTHER:PTN000139394\t\t20201118\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-852934\tenables\tGO:0005096\tGO_REF:0000033\tECO:0000318\tPANTHER:PTN001141948\t\t20201119\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-17336014\tenables\tGO:0072518\tGO_REF:0000033\tECO:0000318\tPANTHER:PTN000542090\t\t20201119\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-1217556\tenables\tGO:0004705\tGO_REF:0000033\tECO:0000318\tPANTHER:PTN001171982\t\t20201119\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-865070\tenables\tGO:0042813\tGO_REF:0000033\tECO:0000318\tPANTHER:PTN000139394\t\t20201116\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-865846\tenables\tGO:0019901\tGO_REF:0000033\tECO:0000318\tPANTHER:PTN001530052\t\t20201118\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000026: IBA evidence codes should be filtered from main MOD gaf sources",
                "obj": "",
                "taxon": "",
                "rule": 26
            }
        ],
        "gorule-0000029": [],
        "gorule-0000030": [],
        "gorule-0000037": [],
        "gorule-0000039": [],
        "gorule-0000042": [],
        "gorule-0000043": [],
        "gorule-0000046": [],
        "gorule-0000050": [],
        "gorule-0000055": [],
        "gorule-0000058": [],
        "gorule-0000061": [
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-5752726\tpart_of\tGO:0031514\tPMID:33504787\tECO:0001249\t\t\t20210210\tXenbase\tpart_of(XAO:0005179)\tnoctua-model-id=gomodel:600ced8500001415|model-state=production|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025",
                "obj": "",
                "taxon": "",
                "rule": 61
            },
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-5752726\tpart_of\tGO:0036064\tPMID:33504787\tECO:0001249\t\t\t20260313\tXenbase\tpart_of(GO:0031514),part_of(XAO:0005179)\tnoctua-model-id=gomodel:600ced8500001415|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: BFO:0000050 should be one of RO:0002325, RO:0001025, RO:0002432. Repaired to RO:0001025",
                "obj": "",
                "taxon": "",
                "rule": 61
            },
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-17337757\tacts_upstream_of_or_within_positive_effect\tGO:0003700\tPMID:20858598\tECO:0006063\t\t\t20231219\tXenbase\t\tnoctua-model-id=gomodel:62b4ffe300003420|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0004032 should be one of RO:0002326, RO:0002327. Repaired to RO:0002327",
                "obj": "",
                "taxon": "",
                "rule": 61
            },
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-977569\tlocated_in\tGO:0120103\tPMID:39864486\tECO:0007106\t\t\t20260406\tXenbase\t\tnoctua-model-id=gomodel:69c59f8a00002601|model-state=production|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050",
                "obj": "",
                "taxon": "",
                "rule": 61
            },
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-977569\tlocated_in\tGO:0120103\tPMID:39864486\tECO:0005601\t\t\t20260406\tXenbase\t\tnoctua-model-id=gomodel:69c59f8a00002601|model-state=production|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000061: Found violation of: `Only certain gene product to term relations are allowed for a given GO term` but was repaired: RO:0001025 should be one of BFO:0000050. Repaired to BFO:0000050",
                "obj": "",
                "taxon": "",
                "rule": 61
            }
        ],
        "gorule-0000063": [
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-17339046\tenables\tGO:0004521\tPMID:24683410\tECO:0000266\t\t\t20200727\tXenbase\tpart_of(GO:0031016),part_of(GO:0048557),occurs_in(GO:0005737),has_input(Xenbase:XB-GENE-487128)\tmodel-state=production|noctua-model-id=gomodel:5ee8120100002365|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-996950\tacts_upstream_of_or_within\tGO:0000380\tPMID:33230114\tECO:0000266\t\t\t20210112\tXenbase\tpart_of(GO:0001843),occurs_in(GO:0005634),has_input(Xenbase:XB-GENE-6041676)\tmodel-state=production|noctua-model-id=gomodel:5fce9b7300000409|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-5782073\tis_active_in\tGO:0000785\tPMID:31936777\tECO:0000266\t\t\t20210909\tXenbase\t\tnoctua-model-id=gomodel:61283a3000000756|model-state=production|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            },
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-5782073\tenables\tGO:0003682\tPMID:31936777\tECO:0000266\t\t\t20210909\tXenbase\toccurs_in(GO:0000785)\tnoctua-model-id=gomodel:61283a3000000756|model-state=production|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000063: Annotations using ISS/ISA/ISO evidence should refer to a gene product (in the 'with' column)",
                "obj": "",
                "taxon": "",
                "rule": 63
            }
        ],
        "gorule-0000064": [],
        "gorule-0000065": [
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-483735\tacts_upstream_of_or_within\tGO:0007258\tPMID:16026968\tECO:0006063\t\t\t20190411\tXenbase\t\tnoctua-model-id=gomodel:5a7e68a100000628|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed",
                "obj": "",
                "taxon": "",
                "rule": 65
            },
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-17340943\tacts_upstream_of_or_within\tGO:0007258\tPMID:16026968\tECO:0006063\t\t\t20181026\tXenbase\t\tnoctua-model-id=gomodel:5a7e68a100000628|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed",
                "obj": "",
                "taxon": "",
                "rule": 65
            },
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-6488002\tacts_upstream_of_or_within_negative_effect\tGO:0006468\tPMID:32859582\tECO:0000314\t\t\t20230711\tXenbase\thas_input(Xenbase:XB-GENE-17332607)\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:62900b6400002070\n",
                "type": "Violates GO Rule",
                "message": "GORULE:0000065: Annotations to term that are candidates for obsoletion should be removed",
                "obj": "",
                "taxon": "",
                "rule": 65
            }
        ],
        "gorule-0000013": [],
        "gorule-0000020": [
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-17337757\tenables\tGO:0060725\tPMID:20858598\tECO:0006063\t\t\t20231219\tXenbase\t\tnoctua-model-id=gomodel:62b4ffe300003420|model-state=production|contributor=https://orcid.org/0000-0003-1074-8103\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:0060725",
                "taxon": "",
                "rule": 20
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-5846983\tenables\tGO:1904929\tPMID:28427856\tECO:0007752\t\t\t20230302\tXenbase\t\tmodel-state=production|contributor=https://orcid.org/0000-0003-1074-8103|noctua-model-id=gomodel:5fadbcf000000317\n",
                "type": "Obsolete class with no replacement",
                "message": "Violates GORULE:0000020",
                "obj": "GO:1904929",
                "taxon": "",
                "rule": 20
            },
            {
                "level": "WARNING",
                "line": "Xenbase\tXB-GENE-977569\tacts_upstream_of_or_within\tGO:0097711\tPMID:39864486\tECO:0006051\tXenbase:XB-MORPHOLINO-29231311|Xenbase:XB-MORPHOLINO-29231312\t\t20260406\tXenbase\t\tnoctua-model-id=gomodel:69c59f8a00002601|model-state=production|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Obsolete class",
                "message": "Violates GORULE:0000020, but was repaired",
                "obj": "GO:0097711",
                "taxon": "",
                "rule": 20
            }
        ],
        "gorule-0000027": [
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-480717\tacts_upstream_of_or_within\tGO:1904888\tPMID:34664392\tECO:0007089\tXENBASE:XB-gRNA-23659462;XB-gRNA-25874518\t\t20220106\tXenbase\tpart_of(GO:0071599)\tnoctua-model-id=gomodel:61bcf0b700000339|model-state=production|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: contains non letter, non number character, or spaces",
                "obj": "XENBASE:XB-gRNA-23659462;XB-gRNA-25874518",
                "taxon": "",
                "rule": 27
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-6254887\tinvolved_in\tGO:0021505\tPMID:38388461\tECO:0007089\tXenbase:XB-MORPHOLINO-18375548;\t\t20240322\tXenbase\tpart_of(GO:0001843)\tmodel-state=production|noctua-model-id=gomodel:65f3ae5c00000062|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: contains non letter, non number character, or spaces",
                "obj": "Xenbase:XB-MORPHOLINO-18375548;",
                "taxon": "",
                "rule": 27
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-6254887\tenables\tGO:0141147\tPMID:38388461\tECO:0007089\tXenbase:XB-MORPHOLINO-18375548;\t\t20240322\tXenbase\tpart_of(GO:0001843),part_of(GO:0021505)\tmodel-state=production|noctua-model-id=gomodel:65f3ae5c00000062|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: contains non letter, non number character, or spaces",
                "obj": "Xenbase:XB-MORPHOLINO-18375548;",
                "taxon": "",
                "rule": 27
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-6254887\tinvolved_in\tGO:0001843\tPMID:38388461\tECO:0007089\tXenbase:XB-MORPHOLINO-18375548;\t\t20240322\tXenbase\t\tmodel-state=production|noctua-model-id=gomodel:65f3ae5c00000062|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: contains non letter, non number character, or spaces",
                "obj": "Xenbase:XB-MORPHOLINO-18375548;",
                "taxon": "",
                "rule": 27
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-17333851\tacts_upstream_of_or_within\tGO:0055010\tPMID:38501224\tECO:0007089\tXenbase:XB-MORPHOLINO-22249065;Xenbase:XB-MORPHOLINO-29212937\t\t20240620\tXenbase\tpart_of(GO:0007507)\tmodel-state=production|noctua-model-id=gomodel:666b894f00001795|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: contains non letter, non number character, or spaces",
                "obj": "Xenbase:XB-MORPHOLINO-22249065;Xenbase:XB-MORPHOLINO-29212937",
                "taxon": "",
                "rule": 27
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-17330203\tacts_upstream_of_or_within\tGO:0120221\tPMID:30665704\tECO:0007089\tXenbase:XB-MORPHOLINO-29212947;Xenbase:XB-MORPHOLINO-29212948\t\t20240627\tXenbase\toccurs_in(GO:0005929),occurs_in(XAO:0005179)\tmodel-state=production|noctua-model-id=gomodel:666b894f00002553|contributor=https://orcid.org/0000-0001-5495-4588\n",
                "type": "Invalid identifier",
                "message": "GORULE:0000027: contains non letter, non number character, or spaces",
                "obj": "Xenbase:XB-MORPHOLINO-29212947;Xenbase:XB-MORPHOLINO-29212948",
                "taxon": "",
                "rule": 27
            }
        ],
        "gorule-0000001": [
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-17333137\tacts_upstream_of_or_within\tGO:0001755\t38499770\tECO:0007089\t\t\t20240402\tXenbase\t\tnoctua-model-id=gomodel:6606056e00000416|model-state=production|contributor=https://orcid.org/0000-0001-5495-4588",
                "type": "Invalid symbol",
                "message": "Problem parsing references",
                "obj": "38499770",
                "taxon": "NCBITaxon:0",
                "rule": 1
            },
            {
                "level": "ERROR",
                "line": "Xenbase\tXB-GENE-17333137\tacts_upstream_of_or_within\tGO:0016055\t38499770\tECO:0007089\t\t\t20240402\tXenbase\t\tnoctua-model-id=gomodel:6606056e00000416|model-state=production|contributor=https://orcid.org/0000-0001-5495-4588",
                "type": "Invalid symbol",
                "message": "Problem parsing references",
                "obj": "38499770",
                "taxon": "NCBITaxon:0",
                "rule": 1
            }
        ]
    }
}