[
  {
    "database": "AgBase",
    "name": "AgBase resource for functional analysis of agricultural plant and animal gene products",
    "generic_urls": [
      "http://www.agbase.msstate.edu/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "P02264",
        "url_syntax": "https://agbase.arizona.edu/cgi-bin/getEntry.pl?db_pick=all&database=Swiss-Prot&gb_acc=[example_id]"
      }
    ]
  },
  {
    "database": "AGI_LocusCode",
    "name": "Arabidopsis Genome Initiative",
    "description": "Comprises TAIR, TIGR and MIPS",
    "generic_urls": [
      "http://www.arabidopsis.org"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "A[Tt][MmCc0-5][Gg][0-9]{5}(\\.[0-9]{1})?",
        "url_syntax": "https://www.arabidopsis.org/locus?name=[example_id]",
        "example_id": "AGI_LocusCode:At2g17950",
        "example_url": "https://www.arabidopsis.org/locus?name=At2g17950"
      }
    ]
  },
  {
    "database": "AGRICOLA_ID",
    "name": "AGRICultural OnLine Access",
    "generic_urls": [
      "http://agricola.nal.usda.gov/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "AGRICOLA_NAL:TP248.2 P76 v.14"
      }
    ]
  },
  {
    "database": "AGRICOLA_IND",
    "name": "AGRICultural OnLine Access",
    "generic_urls": [
      "http://agricola.nal.usda.gov/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "AGRICOLA_IND:IND23252955"
      }
    ]
  },
  {
    "database": "Alzheimers_University_of_Toronto",
    "name": "Alzheimers Project at University of Toronto",
    "generic_urls": [
      "http://www.ims.utoronto.ca/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "APweb",
    "name": "Angiosperm Phylogeny Website",
    "generic_urls": [
      "http://www.mobot.org/mobot/research/apweb/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.mobot.org/mobot/research/apweb/top/glossarya_h.html",
        "example_id": "APweb:Glossary",
        "example_url": "http://www.mobot.org/mobot/research/apweb/top/glossarya_h.html"
      }
    ]
  },
  {
    "database": "ARUK-UCL",
    "name": "Alzheimers Research Gene Ontology Initiative",
    "generic_urls": [
      "https://www.ucl.ac.uk/cardiovascular/research/pre-clinical-and-fundamental-science/functional-gene-annotation/neurological-gene-0"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "ASAP",
    "name": "A Systematic Annotation Package for Community Analysis of Genomes",
    "generic_urls": [
      "https://asap.genetics.wisc.edu/asap/ASAP1.htm"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "url_syntax": "https://asap.genetics.wisc.edu/asap/feature_info.php?FeatureID=[example_id]",
        "example_id": "ASAP:ABF-0014586",
        "example_url": "https://asap.genetics.wisc.edu/asap/feature_info.php?FeatureID=ABF-0014586"
      }
    ]
  },
  {
    "database": "AspGD",
    "name": "Aspergillus Genome Database",
    "synonyms": [
      "ASPGD",
      "AspGDID"
    ],
    "generic_urls": [
      "http://www.aspergillusgenome.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "ASPL[0-9]{10}",
        "url_syntax": "http://www.aspergillusgenome.org/cgi-bin/locus.pl?dbid=[example_id]",
        "example_id": "AspGD:ASPL0000067538",
        "example_url": "http://www.aspergillusgenome.org/cgi-bin/locus.pl?dbid=ASPL0000067538"
      }
    ]
  },
  {
    "database": "AspGD_LOCUS",
    "name": "Aspergillus Genome Database",
    "rdf_uri_prefix": "http://identifiers.org/aspgd.locus/",
    "generic_urls": [
      "http://www.aspergillusgenome.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.aspergillusgenome.org/cgi-bin/locus.pl?locus=[example_id]",
        "example_id": "AspGD_LOCUS:AN10942",
        "example_url": "http://www.aspergillusgenome.org/cgi-bin/locus.pl?locus=AN10942"
      }
    ]
  },
  {
    "database": "AspGD_REF",
    "name": "Aspergillus Genome Database",
    "generic_urls": [
      "http://www.aspergillusgenome.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.aspergillusgenome.org/cgi-bin/reference/reference.pl?dbid=[example_id]",
        "example_id": "AspGD_REF:90",
        "example_url": "http://www.aspergillusgenome.org/cgi-bin/reference/reference.pl?dbid=90"
      }
    ]
  },
  {
    "database": "BFO",
    "name": "Basic Formal Ontology",
    "description": "An upper ontology used by Open Bio Ontologies (OBO) Foundry. BFO contains upper-level classes as well as core relations such as part_of (BFO_0000050)",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/BFO_",
    "generic_urls": [
      "http://purl.obolibrary.org/obo/bfo"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://purl.obolibrary.org/obo/BFO_[example_id]",
        "example_id": "BFO:0000066",
        "example_url": "http://purl.obolibrary.org/obo/BFO_0000066"
      }
    ]
  },
  {
    "database": "BHF-UCL",
    "name": "Cardiovascular Gene Ontology Annotation Initiative",
    "description": "The Cardiovascular Gene Ontology Annotation Initiative is supported by the British Heart Foundation (BHF) and located at University College London (UCL).",
    "generic_urls": [
      "https://www.ucl.ac.uk/cardiovascular/research/pre-clinical-and-fundamental-science/functional-gene-annotation/cardiovascular-gene"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "BioCyc",
    "name": "BioCyc collection of metabolic pathway databases",
    "generic_urls": [
      "http://biocyc.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://biocyc.org/META/NEW-IMAGE?type=PATHWAY&object=[example_id]",
        "example_id": "BioCyc:PWY-5271",
        "example_url": "http://biocyc.org/META/NEW-IMAGE?type=PATHWAY&object=PWY-5271"
      }
    ]
  },
  {
    "database": "BIOMD",
    "name": "BioModels Database",
    "synonyms": [
      "BIOMDID"
    ],
    "generic_urls": [
      "https://www.ebi.ac.uk/biomodels/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.ebi.ac.uk/biomodels/[example_id]",
        "example_id": "BIOMD:BIOMD0000000045",
        "example_url": "https://www.ebi.ac.uk/biomodels/BIOMD0000000045"
      }
    ]
  },
  {
    "database": "BRENDA",
    "name": "BRENDA, The Comprehensive Enzyme Information System",
    "generic_urls": [
      "http://www.brenda-enzymes.info"
    ],
    "entity_types": [
      {
        "type_name": "catalytic activity",
        "type_id": "GO:0003824",
        "url_syntax": "https://www.brenda-enzymes.info/enzyme.php?ecno=[example_id]",
        "example_id": "BRENDA:4.2.1.3",
        "example_url": "https://www.brenda-enzymes.info/enzyme.php?ecno=4.2.1.3"
      }
    ]
  },
  {
    "database": "BTO",
    "name": "BRENDA tissue / enzyme ontology",
    "description": "A structured controlled vocabulary for the source of an enzyme comprising tissues, cell lines, cell types and cell cultures.",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/BTO_",
    "generic_urls": [
      "http://purl.obolibrary.org/obo/bto"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://purl.obolibrary.org/obo/BTO_[example_id]",
        "example_id": "BTO_0002164",
        "example_url": "http://purl.obolibrary.org/obo/BTO_0002164"
      }
    ]
  },
  {
    "database": "CACAO",
    "name": "Community Assessment of Community Annotation with Ontologies",
    "description": "The Community Assessment of Community Annotation with Ontologies (CACAO) is a project to do large-scale manual community annotation of gene function using the Gene Ontology as a multi-institution student competition.",
    "generic_urls": [
      "http://gowiki.tamu.edu/wiki/index.php/Category:CACAO"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://gowiki.tamu.edu/wiki/index.php/[example_id]",
        "example_id": "MYCS2:A0QNF5",
        "example_url": "https://gowiki.tamu.edu/wiki/index.php/MYCS2:A0QNF5"
      }
    ]
  },
  {
    "database": "CAFA",
    "name": "Critical Assessment of Protein Function Annotation",
    "generic_urls": [
      "http://biofunctionprediction.org/cafa/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "CARO",
    "name": "Common Anatomy Reference Ontology",
    "description": "An upper ontology for anatomy used by OBO Foundry ontologies. Used to facilitate interoperability between existing anatomy ontologies for different species",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/CARO_",
    "generic_urls": [
      "http://purl.obolibrary.org/obo/caro"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://purl.obolibrary.org/obo/CARO_[example_id]",
        "example_id": "CARO:0020003",
        "example_url": "http://purl.obolibrary.org/obo/CARO_0020003"
      }
    ]
  },
  {
    "database": "CAS",
    "name": "CAS Chemical Registry",
    "description": "CAS REGISTRY is the most authoritative collection of disclosed chemical substance information, containing more than 54 million organic and inorganic substances and 62 million sequences. CAS REGISTRY covers substances identified from the scientific literature from 1957 to the present, with additional substances going back to the early 1900s.",
    "rdf_uri_prefix": "http://identifiers.org/cas/",
    "generic_urls": [
      "http://www.cas.org/expertise/cascontent/registry/index.html"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "CAS:58-08-2"
      }
    ]
  },
  {
    "database": "CASGEN",
    "name": "Catalog of Fishes genus database",
    "synonyms": [
      "CAS_GEN"
    ],
    "generic_urls": [
      "https://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatmain.asp"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatget.asp?genid=[example_id]",
        "example_id": "CASGEN:1040",
        "example_url": "https://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatget.asp?genid=1040"
      }
    ]
  },
  {
    "database": "CASREF",
    "name": "Catalog of Fishes publications database",
    "generic_urls": [
      "https://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatmain.asp"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://researcharchive.calacademy.org/research/ichthyology/catalog/getref.asp?id=[example_id]",
        "example_id": "CASREF:2031",
        "example_url": "https://researcharchive.calacademy.org/research/ichthyology/catalog/getref.asp?id=2031"
      }
    ]
  },
  {
    "database": "CASSPC",
    "name": "Catalog of Fishes species database",
    "synonyms": [
      "CAS_SPC"
    ],
    "generic_urls": [
      "https://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatmain.asp"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatget.asp?spid=[example_id]",
        "example_url": "https://researcharchive.calacademy.org/research/ichthyology/catalog/fishcatget.asp?spid=1979"
      }
    ]
  },
  {
    "database": "CAZY",
    "name": "Carbohydrate Active EnZYmes",
    "description": "The CAZy database describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds.",
    "generic_urls": [
      "http://www.cazy.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "(CE|GH|GT|PL)\\d+",
        "url_syntax": "http://www.cazy.org/[example_id].html",
        "example_id": "CAZY:PL11",
        "example_url": "http://www.cazy.org/PL11.html"
      }
    ]
  },
  {
    "database": "DTU",
    "name": "DTU Health Tech Services",
    "description": "Formerly CBS (Center for Biological Sequence Analysis)",
    "generic_urls": [
      "http://www.cbs.dtu.dk/services"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "CBS:TMHMM",
        "example_url": "http://www.cbs.dtu.dk/services/TMHMM/"
      }
    ]
  },
  {
    "database": "CDD",
    "name": "Conserved Domain Database at NCBI",
    "generic_urls": [
      "https://www.ncbi.nlm.nih.gov/cdd"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=[example_id]",
        "example_id": "CDD:34222",
        "example_url": "http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=34222"
      }
    ]
  },
  {
    "database": "CGD",
    "name": "Candida Genome Database",
    "synonyms": [
      "CGDID"
    ],
    "rdf_uri_prefix": "http://identifiers.org/cgd/",
    "generic_urls": [
      "http://www.candidagenome.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "(CAL|CAF)[0-9]{10}",
        "url_syntax": "http://www.candidagenome.org/cgi-bin/locus.pl?dbid=[example_id]",
        "example_id": "CGD:CAL0000179664",
        "example_url": "http://www.candidagenome.org/cgi-bin/locus.pl?dbid=CAL0000179664"
      }
    ]
  },
  {
    "database": "CGD_LOCUS",
    "name": "Candida Genome Database",
    "generic_urls": [
      "http://www.candidagenome.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.candidagenome.org/cgi-bin/locus.pl?locus=[example_id]",
        "example_id": "CGD_LOCUS:HWP1",
        "example_url": "http://www.candidagenome.org/cgi-bin/locus.pl?locus=HWP1"
      }
    ]
  },
  {
    "database": "CGD_REF",
    "name": "Candida Genome Database",
    "generic_urls": [
      "http://www.candidagenome.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.candidagenome.org/cgi-bin/reference/reference.pl?dbid=[example_id]",
        "example_id": "CGD_REF:1490",
        "example_url": "http://www.candidagenome.org/cgi-bin/reference/reference.pl?dbid=1490"
      }
    ]
  },
  {
    "database": "CGSC",
    "name": "CGSC",
    "generic_urls": [
      "http://cgsc.biology.yale.edu/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "CGSC:rbsK",
        "example_url": "http://cgsc.biology.yale.edu/Site.php?ID=315"
      }
    ]
  },
  {
    "database": "CHEBI",
    "name": "Chemical Entities of Biological Interest",
    "synonyms": [
      "ChEBI"
    ],
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/CHEBI_",
    "generic_urls": [
      "http://www.ebi.ac.uk/chebi/"
    ],
    "entity_types": [
      {
        "type_name": "chemical entity",
        "type_id": "CHEBI:24431",
        "id_syntax": "[0-9]{1,6}",
        "url_syntax": "http://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:[example_id]",
        "example_id": "CHEBI:17234",
        "example_url": "http://www.ebi.ac.uk/chebi/searchId.do?chebiId=CHEBI:17234"
      }
    ]
  },
  {
    "database": "CL",
    "name": "Cell Type Ontology",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/CL_",
    "generic_urls": [
      "http://cellontology.org"
    ],
    "entity_types": [
      {
        "type_name": "cell",
        "type_id": "GO:0005623",
        "id_syntax": "[0-9]{7}",
        "url_syntax": "http://purl.obolibrary.org/obo/CL_[example_id]",
        "example_id": "CL:0000041",
        "example_url": "http://purl.obolibrary.org/obo/CL_0000041"
      }
    ]
  },
  {
    "database": "CO_125",
    "name": "Crop Ontology CGIAR Musa Anatomy",
    "generic_urls": [
      "http://www.cropontology.org/ontology/CO_125:0000000/CGIAR_Musa_anatomy"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "CO_125:0000002",
        "example_url": "http://www.cropontology.org/ontology/CO_125:0000000"
      }
    ]
  },
  {
    "database": "COG",
    "name": "NCBI Clusters of Orthologous Groups",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/COG/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "COG_Cluster",
    "name": "NCBI COG cluster",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/COG/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.ncbi.nlm.nih.gov/research/cog/cog/[example_id]",
        "example_id": "COG_Cluster:COG0001",
        "example_url": "https://www.ncbi.nlm.nih.gov/research/cog/cog/COG0001"
      }
    ]
  },
  {
    "database": "COG_Function",
    "name": "NCBI COG function",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/COG/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.ncbi.nlm.nih.gov/research/cog/cogcategory/[example_id]",
        "example_id": "COG_Function:H",
        "example_url": "https://www.ncbi.nlm.nih.gov/research/cog/cogcategory/H"
      }
    ]
  },
  {
    "database": "COG_Pathway",
    "name": "NCBI COG pathway",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/COG/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.ncbi.nlm.nih.gov/research/cog/pathway/[example_id]",
        "example_id": "COG_Pathway:14",
        "example_url": "https://www.ncbi.nlm.nih.gov/research/cog/pathway/14"
      }
    ]
  },
  {
    "database": "CollecTF",
    "name": "Database of transcription factor binding sites (TFBS) in the Bacteria domain",
    "generic_urls": [
      "http://www.collectf.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "ComplexPortal",
    "name": "Complex Portal database of macromolecular complexes",
    "generic_urls": [
      "https://www.ebi.ac.uk/complexportal"
    ],
    "entity_types": [
      {
        "type_name": "macromolecular complex",
        "type_id": "GO:0032991",
        "id_syntax": "CPX-[0-9]+",
        "url_syntax": "https://www.ebi.ac.uk/complexportal/complex/[example_id]",
        "example_id": "ComplexPortal:CPX-2158",
        "example_url": "https://www.ebi.ac.uk/complexportal/complex/CPX-2158"
      }
    ]
  },
  {
    "database": "CORIELL",
    "name": "Coriell Institute for Medical Research",
    "description": "The Coriell Cell Repositories provide essential research reagents to the scientific community by establishing, verifying, maintaining, and distributing cell cultures and DNA derived from cell cultures. These collections, supported by funds from the National Institutes of Health (NIH) and several foundations, are extensively utilized by research scientists around the world.",
    "generic_urls": [
      "http://ccr.coriell.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://ccr.coriell.org/Sections/Search/Sample_Detail.aspx?Ref=[example_id]",
        "example_id": "GM07892",
        "example_url": "http://ccr.coriell.org/Sections/Search/Sample_Detail.aspx?Ref=GM07892"
      }
    ]
  },
  {
    "database": "CORUM",
    "name": "CORUM - the Comprehensive Resource of Mammalian protein complexes",
    "generic_urls": [
      "https://mips.helmholtz-muenchen.de/corum/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://mips.helmholtz-muenchen.de/corum/?id=[example_id]",
        "example_id": "CORUM:837",
        "example_url": "https://mips.helmholtz-muenchen.de/corum/?id=837"
      }
    ]
  },
  {
    "database": "cribi_vitis",
    "name": "Vitis CRIBI database",
    "generic_urls": [
      "http://genomes.cribi.unipd.it"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://genomes.cribi.unipd.it/cgi-bin/pqs2/report.pl?gene_name=[example_id]&release=v1",
        "example_id": "VIT_00s0173g00270",
        "example_url": "http://genomes.cribi.unipd.it/cgi-bin/pqs2/report.pl?gene_name=VIT_00s0173g00270&release=v1"
      }
    ]
  },
  {
    "database": "dbSNP",
    "name": "NCBI dbSNP",
    "rdf_uri_prefix": "http://identifiers.org/dbsnp/",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/projects/SNP"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "\\d+",
        "url_syntax": "http://www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi?rs=[example_id]",
        "example_id": "dbSNP:rs3131969",
        "example_url": "http://www.ncbi.nlm.nih.gov/projects/SNP/snp_ref.cgi?rs=rs3131969"
      }
    ]
  },
  {
    "database": "DDANAT",
    "name": "Dictyostelium discoideum anatomy",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/DDANAT_",
    "generic_urls": [
      "http://dictybase.org/Dicty_Info/dicty_anatomy_ontology.html"
    ],
    "entity_types": [
      {
        "type_name": "anatomical entity",
        "type_id": "CARO:0000000",
        "id_syntax": "[0-9]{7}",
        "example_id": "DDANAT:0000068"
      }
    ]
  },
  {
    "database": "DDBJ",
    "name": "DNA Databank of Japan",
    "generic_urls": [
      "https://www.ddbj.nig.ac.jp"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://getentry.ddbj.nig.ac.jp/getentry/na/[example_id]",
        "example_id": "DDBJ:AA816246",
        "example_url": "http://getentry.ddbj.nig.ac.jp/getentry/na/AA816246"
      }
    ]
  },
  {
    "database": "dictyBase",
    "name": "dictyBase",
    "synonyms": [
      "DDB",
      "DictyBase"
    ],
    "rdf_uri_prefix": "http://identifiers.org/dictybase.gene/",
    "generic_urls": [
      "http://dictybase.org"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "DDB_G[0-9]{7}",
        "url_syntax": "http://dictybase.org/gene/[example_id]",
        "example_id": "dictyBase:DDB_G0277859",
        "example_url": "http://dictybase.org/gene/DDB_G0277859"
      }
    ]
  },
  {
    "database": "dictyBase_gene_name",
    "name": "dictyBase",
    "generic_urls": [
      "http://dictybase.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://dictybase.org/gene/[example_id]",
        "example_id": "dictyBase_gene_name:mlcE",
        "example_url": "http://dictybase.org/gene/mlcE"
      }
    ]
  },
  {
    "database": "dictyBase_REF",
    "name": "dictyBase literature references",
    "synonyms": [
      "DDB_REF"
    ],
    "generic_urls": [
      "http://dictybase.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://dictybase.org/publication/[example_id]",
        "example_id": "dictyBase_REF:10157",
        "example_url": "http://dictybase.org/publication/10157"
      }
    ]
  },
  {
    "database": "DisProt",
    "name": "DisProt",
    "description": "Database of intrinsically disordered proteins",
    "generic_urls": [
      "https://www.disprot.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.disprot.org/[example_id]",
        "example_id": "DP00086",
        "example_url": "https://www.disprot.org/DP00086"
      }
    ]
  },
  {
    "database": "DOI",
    "name": "Digital Object Identifier",
    "generic_urls": [
      "http://dx.doi.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "10\\.[0-9]+\\/.*",
        "url_syntax": "http://dx.doi.org/[example_id]",
        "example_id": "DOI:10.1016/S0963-9969(99)00021-6",
        "example_url": "http://dx.doi.org/10.1016/S0963-9969(99)00021-6"
      }
    ]
  },
  {
    "database": "EC",
    "name": "Enzyme Commission",
    "rdf_uri_prefix": "http://purl.uniprot.org/enzyme/",
    "generic_urls": [
      "http://enzyme.expasy.org/"
    ],
    "entity_types": [
      {
        "type_name": "catalytic activity",
        "type_id": "GO:0003824",
        "url_syntax": "https://enzyme.expasy.org/EC/[example_id]",
        "example_id": "EC:1.1.1.1",
        "example_url": "https://enzyme.expasy.org/EC/1.1.1.1"
      }
    ]
  },
  {
    "database": "EchoBASE",
    "name": "EchoBASE post-genomic database for Escherichia coli",
    "generic_urls": [
      "https://www.york.ac.uk/res/thomas/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "EB[0-9]{4}",
        "url_syntax": "https://www.york.ac.uk/res/thomas/Gene.cfm?&recordID=[example_id]",
        "example_id": "EchoBASE:EB0231",
        "example_url": "https://www.york.ac.uk/res/thomas/Gene.cfm?&recordID=EB0231"
      }
    ]
  },
  {
    "database": "ECO",
    "name": "Evidence Code Ontology",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/ECO_",
    "generic_urls": [
      "http://www.evidenceontology.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "\\d{7}",
        "url_syntax": "http://www.evidenceontology.org/browse/#ECO_[example_id]",
        "example_id": "ECO:0000315",
        "example_url": "http://www.evidenceontology.org/browse/#ECO_0000315"
      }
    ]
  },
  {
    "database": "EcoCyc",
    "name": "Scientific database for the bacterium Escherichia coli K-12 MG1655",
    "generic_urls": [
      "https://ecocyc.org/"
    ],
    "entity_types": [
      {
        "type_name": "biological_process",
        "type_id": "GO:0008150",
        "id_syntax": "^[A-Za-z0-9+_.%-:]+$",
        "url_syntax": "https://ecocyc.org/ECOLI/NEW-IMAGE?type=PATHWAY&object=[example_id]",
        "example_id": "EcoCyc:P2-PWY",
        "example_url": "https://ecocyc.org/ECOLI/NEW-IMAGE?type=PATHWAY&object=P2-PWY"
      },
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "^[A-Za-z0-9+_.%-:]+$",
        "url_syntax": "https://ecocyc.org/gene?orgid=ECOLI&id=[example_id]",
        "example_id": "EcoCyc:RBSA-MONOMER",
        "example_url": "https://ecocyc.org/gene?orgid=ECOLI&id=RBSA-MONOMER"
      },
      {
        "type_name": "ribonucleic acid",
        "type_id": "CHEBI:33697",
        "id_syntax": "^[A-Za-z0-9+_.%-:]+$",
        "url_syntax": "https://ecocyc.org/gene?orgid=ECOLI&id=[example_id]",
        "example_id": "EcoCyc:EG30086",
        "example_url": "https://ecocyc.org/gene?orgid=ECOLI&id=EG30086"
      },
      {
        "type_name": "protein-containing complex",
        "type_id": "GO:0032991",
        "id_syntax": "^[A-Za-z0-9+_.%-:]+$",
        "url_syntax": "https://ecocyc.org/ECOLI/NEW-IMAGE?id=[example_id]",
        "example_id": "EcoCyc:ABC-28-CPLX",
        "example_url": "https://ecocyc.org/ECOLI/NEW-IMAGE?id=ABC-28-CPLX"
      }
    ]
  },
  {
    "database": "EcoCyc_REF",
    "name": "Scientific database for the bacterium Escherichia coli K-12 MG1655",
    "synonyms": [
      "ECOCYC_REF"
    ],
    "generic_urls": [
      "https://ecocyc.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://ecocyc.org/ECOLI/reference.html?type=CITATION-FRAME&object=[example_id]",
        "example_id": "EcoCyc_REF:COLISALII",
        "example_url": "https://ecocyc.org/ECOLI/reference.html?type=CITATION-FRAME&object=COLISALII"
      }
    ]
  },
  {
    "database": "EcoliWiki",
    "name": "EcoliWiki from EcoliHub",
    "description": "EcoliHub\\'s subsystem for community annotation of E. coli K-12",
    "generic_urls": [
      "http://ecoliwiki.net/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "[A-Za-z]{3,4}"
      }
    ]
  },
  {
    "database": "EMAPA",
    "name": "Mouse gross anatomy and development, abstract",
    "description": "A time-independent Mouse Anatomical Dictionary; part of Gene Expression Database",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/EMAPA_",
    "generic_urls": [
      "http://emouseatlas.org/"
    ],
    "entity_types": [
      {
        "type_name": "anatomical entity",
        "type_id": "CARO:0000000",
        "id_syntax": "[0-9]{5}",
        "url_syntax": "http://www.informatics.jax.org/vocab/gxd/anatomy/EMAPA:[example_id]",
        "example_id": "EMAPA:16032",
        "example_url": "http://www.informatics.jax.org/vocab/gxd/anatomy/EMAPA:16894"
      }
    ]
  },
  {
    "database": "EMBL",
    "name": "EMBL Nucleotide Sequence Database",
    "description": "International nucleotide sequence database collaboration, comprising EMBL-EBI nucleotide sequence data library (EMBL-Bank), DNA DataBank of Japan (DDBJ), and NCBI GenBank",
    "generic_urls": [
      "http://www.ebi.ac.uk/embl/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "([A-Z]{1}[0-9]{5})|([A-Z]{2}[0-9]{6})|([A-Z]{4}[0-9]{8,9})",
        "url_syntax": "http://www.ebi.ac.uk/cgi-bin/emblfetch?style=html&Submit=Go&id=[example_id]",
        "example_id": "EMBL:AA816246",
        "example_url": "http://www.ebi.ac.uk/cgi-bin/emblfetch?style=html&Submit=Go&id=AA816246"
      }
    ]
  },
  {
    "database": "ENA",
    "name": "European Nucleotide Archive",
    "description": "ENA is made up of a number of distinct databases that includes EMBL-Bank, the newly established Sequence Read Archive (SRA) and the Trace Archive. International nucleotide sequence database collaboration, comprising ENA-EBI nucleotide sequence data library (EMBL-Bank), DNA DataBank of Japan (DDBJ), and NCBI GenBank",
    "generic_urls": [
      "http://www.ebi.ac.uk/ena/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "([A-Z]{1}[0-9]{5})|([A-Z]{2}[0-9]{6})|([A-Z]{4}[0-9]{8,9})",
        "url_syntax": "http://www.ebi.ac.uk/ena/data/view/[example_id]",
        "example_id": "ENA:AA816246",
        "example_url": "http://www.ebi.ac.uk/ena/data/view/AA816246"
      }
    ]
  },
  {
    "database": "ENSEMBL",
    "name": "Ensembl database of automatically annotated genomic data",
    "synonyms": [
      "Ensembl",
      "ensembl"
    ],
    "rdf_uri_prefix": "http://identifiers.org/ensembl/",
    "generic_urls": [
      "http://www.ensembl.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "ENS[A-Z0-9]{10,17}",
        "url_syntax": "http://www.ensembl.org/id/[example_id]",
        "example_id": "ENSEMBL:ENSP00000265949",
        "example_url": "http://www.ensembl.org/id/ENSP00000265949"
      },
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "ENS[A-Z0-9]{10,17}",
        "url_syntax": "http://www.ensembl.org/id/[example_id]",
        "example_id": "ENSEMBL:ENSP00000265949",
        "example_url": "http://www.ensembl.org/id/ENSP00000265949"
      },
      {
        "type_name": "transcript",
        "type_id": "SO:0000673",
        "id_syntax": "ENS[A-Z0-9]{10,17}",
        "url_syntax": "http://www.ensembl.org/id/[example_id]",
        "example_id": "ENSEMBL:ENSP00000265949",
        "example_url": "http://www.ensembl.org/id/ENSP00000265949"
      }
    ]
  },
  {
    "database": "ENSEMBL_GeneID",
    "name": "Ensembl database of automatically annotated genomic data",
    "generic_urls": [
      "http://www.ensembl.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "ENSG[0-9]{9,16}",
        "url_syntax": "http://www.ensembl.org/id/[example_id]",
        "example_id": "ENSEMBL_GeneID:ENSG00000126016",
        "example_url": "http://www.ensembl.org/id/ENSG00000126016"
      }
    ]
  },
  {
    "database": "ENSEMBL_ProteinID",
    "name": "Ensembl database of automatically annotated genomic data",
    "generic_urls": [
      "http://www.ensembl.org/"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "ENSP[0-9]{9,16}",
        "url_syntax": "http://www.ensembl.org/id/[example_id]",
        "example_id": "ENSEMBL_ProteinID:ENSP00000361027",
        "example_url": "http://www.ensembl.org/id/ENSP00000361027"
      }
    ]
  },
  {
    "database": "ENSEMBL_TranscriptID",
    "name": "Ensembl database of automatically annotated genomic data",
    "generic_urls": [
      "http://www.ensembl.org/"
    ],
    "entity_types": [
      {
        "type_name": "transcript",
        "type_id": "SO:0000673",
        "id_syntax": "ENST[0-9]{9,16}",
        "url_syntax": "http://www.ensembl.org/id/[example_id]",
        "example_id": "ENSEMBL_TranscriptID:ENST00000371959",
        "example_url": "http://www.ensembl.org/id/ENST00000371959"
      }
    ]
  },
  {
    "database": "EnsemblFungi",
    "name": "Ensembl Fungi, the Ensembl database for accessing genome-scale data from fungi.",
    "generic_urls": [
      "http://fungi.ensembl.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "url_syntax": "http://www.ensemblgenomes.org/id/[example_id]",
        "example_id": "EnsemblFungi:YOR197W",
        "example_url": "http://www.ensemblgenomes.org/id/YOR197W"
      }
    ]
  },
  {
    "database": "EnsemblMetazoa",
    "name": "Ensembl Metazoa, the Ensembl database for accessing genome-scale data from non-vertebrate metazoa.",
    "generic_urls": [
      "http://metazoa.ensembl.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "url_syntax": "http://www.ensemblgenomes.org/id/[example_id]",
        "example_id": "EnsemblMetazoa:FBgn0052693",
        "example_url": "http://www.ensemblgenomes.org/id/FBgn0052693"
      }
    ]
  },
  {
    "database": "EnsemblPlants",
    "name": "Ensembl Plants, the Ensembl database for accessing genome-scale data from plants.",
    "synonyms": [
      "EnsemblPlants/Gramene"
    ],
    "generic_urls": [
      "http://plants.ensembl.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "url_syntax": "http://www.ensemblgenomes.org/id/[example_id]",
        "example_id": "EnsemblPlants:LOC_Os01g22954",
        "example_url": "http://www.ensemblgenomes.org/id/LOC_Os01g22954"
      }
    ]
  },
  {
    "database": "EnsemblProtists",
    "name": "Ensembl Protists, the Ensembl database for accessing genome-scale data from protists.",
    "generic_urls": [
      "http://protists.ensembl.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "url_syntax": "http://www.ensemblgenomes.org/id/[example_id]",
        "example_id": "EnsemblProtists:PFL2550w",
        "example_url": "http://www.ensemblgenomes.org/id/PFL2550w"
      }
    ]
  },
  {
    "database": "ENZYME",
    "name": "Swiss Institute of Bioinformatics enzyme database",
    "generic_urls": [
      "https://enzyme.expasy.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://enzyme.expasy.org/EC/[example_id]",
        "example_id": "1.1.1.1",
        "example_url": "https://enzyme.expasy.org/EC/1.1.1.1"
      }
    ]
  },
  {
    "database": "EO_GIT",
    "name": "GitHub Issue Tracker for EO",
    "generic_urls": [
      "https://github.com/Planteome/plant-environment-ontology"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://github.com/Planteome/plant-environment-ontology/issues/[example_id]",
        "example_id": "EO_GIT:76",
        "example_url": "https://github.com/Planteome/plant-environment-ontology/issues/76"
      }
    ]
  },
  {
    "database": "EuPathDB",
    "name": "The Eukaryotic Pathogen Database",
    "generic_urls": [
      "http://eupathdb.org"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "BET:0000000",
        "url_syntax": "http://eupathdb.org/gene/[example_id]",
        "example_id": "EuPathDB:LtaP17.1490",
        "example_url": "http://eupathdb.org/gene/LtaP17.1490"
      }
    ]
  },
  {
    "database": "Eurofung",
    "name": "Eurofungbase community annotation",
    "generic_urls": [
      "http://www.eurofung.net/option=com_content&task=section&id=3&Itemid=4"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "FB",
    "name": "FlyBase",
    "synonyms": [
      "FLYBASE"
    ],
    "rdf_uri_prefix": "http://identifiers.org/flybase/",
    "generic_urls": [
      "http://flybase.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "FBgn[0-9]{7}",
        "url_syntax": "http://flybase.org/reports/[example_id].html",
        "example_id": "FB:FBgn0000024",
        "example_url": "http://flybase.org/reports/FBgn0000024.html"
      },
      {
        "type_name": "reference",
        "type_id": "BET:0000000",
        "id_syntax": "FBrf[0-9]{7}",
        "url_syntax": "http://flybase.org/reports/[example_id].htm",
        "example_id": "FBrf0193169",
        "example_url": "https://flybase.org/reports/FBrf0193169.htm"
      }
    ]
  },
  {
    "database": "FBbt",
    "name": "Drosophila gross anatomy",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/FBbt_",
    "generic_urls": [
      "http://flybase.org/"
    ],
    "entity_types": [
      {
        "type_name": "cell",
        "type_id": "GO:0005623",
        "id_syntax": "[0-9]{8}",
        "url_syntax": "http://flybase.org/cgi-bin/fbcvq.html?query=FBbt:[example_id]",
        "example_id": "FBbt:00007002",
        "example_url": "http://flybase.org/cgi-bin/fbcvq.html?query=FBbt:00007002"
      },
      {
        "type_name": "anatomical entity",
        "type_id": "UBERON:0001062",
        "id_syntax": "[0-9]{8}",
        "url_syntax": "http://flybase.org/cgi-bin/fbcvq.html?query=FBbt:[example_id]",
        "example_id": "FBbt:10000000",
        "example_url": "http://flybase.org/cgi-bin/fbcvq.html?query=FBbt:10000000"
      }
    ]
  },
  {
    "database": "FBdv",
    "name": "Drosophila development",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/FBdv_",
    "generic_urls": [
      "http://flybase.org/"
    ],
    "entity_types": [
      {
        "type_name": "life cycle stage",
        "type_id": "UBERON:0000105",
        "id_syntax": "[0-9]{8}",
        "url_syntax": "http://flybase.org/cgi-bin/fbcvq.html?query=FBdv:[example_id]",
        "example_id": "FBdv:00007012",
        "example_url": "http://flybase.org/cgi-bin/fbcvq.html?query=FBdv:00007012"
      }
    ]
  },
  {
    "database": "FMA",
    "name": "Foundational Model of Anatomy",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/FMA_",
    "generic_urls": [
      "http://sig.biostr.washington.edu/projects/fm/index.html"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "FMA:61905"
      }
    ]
  },
  {
    "database": "FYPO",
    "name": "Fission Yeast Phenotype Ontology",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/FYPO_",
    "generic_urls": [
      "http://www.pombase.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "\\d{7}",
        "example_id": "FYPO:0000001"
      }
    ]
  },
  {
    "database": "GenBank",
    "name": "GenBank",
    "description": "The NIH genetic sequence database, an annotated collection of all publicly available DNA sequences.",
    "synonyms": [
      "GB"
    ],
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/Genbank/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "([A-Z]{2}[0-9]{6})|([A-Z]{1}[0-9]{5})",
        "url_syntax": "http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=[example_id]",
        "example_id": "GB:AA816246",
        "example_url": "http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=AA816246"
      },
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "([A-Z]{2}[0-9]{6})|([A-Z]{1}[0-9]{5})",
        "url_syntax": "http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=[example_id]",
        "example_id": "GB:AA816246",
        "example_url": "http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=AA816246"
      }
    ]
  },
  {
    "database": "Gene3D",
    "name": "Domain Architecture Classification",
    "generic_urls": [
      "http://gene3d.biochem.ucl.ac.uk/Gene3D/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://gene3d.biochem.ucl.ac.uk/search?mode=family&sterm=[example_id]",
        "example_id": "Gene3D:3.30.390.30",
        "example_url": "http://gene3d.biochem.ucl.ac.uk/search?mode=family&sterm=3.30.390.30"
      }
    ]
  },
  {
    "database": "GeneDB",
    "name": "GeneDB",
    "rdf_uri_prefix": "http://identifiers.org/genedb/",
    "generic_urls": [
      "http://www.genedb.org/gene/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "((LmjF|LinJ|LmxM)\\.[0-9]{2}\\.[0-9]{4})|(PF3D7_[0-9]{7})|(Tb[0-9]+\\.[A-Za-z0-9]+\\.[0-9]+)|(TcCLB\\.[0-9]{6}\\.[0-9]+)",
        "url_syntax": "http://www.genedb.org/gene/[example_id]",
        "example_id": "PF3D7_1467300",
        "example_url": "http://www.genedb.org/gene/PF3D7_1467300"
      }
    ]
  },
  {
    "database": "Genesys-pgr",
    "name": "Gene DB, Genesys",
    "generic_urls": [
      "https://www.genesys-pgr.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.genesys-pgr.org/acn/search?q=[example_id]",
        "example_id": "Genesys-pgr:CM1015-16",
        "example_url": "https://www.genesys-pgr.org/acn/search?q=CM1015-16"
      }
    ]
  },
  {
    "database": "GEO",
    "name": "NCBI Gene Expression Omnibus",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/geo/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.ncbi.nlm.nih.gov/sites/GDSbrowser?acc=[example_id]",
        "example_id": "GEO:GDS2223",
        "example_url": "http://www.ncbi.nlm.nih.gov/sites/GDSbrowser?acc=GDS2223"
      }
    ]
  },
  {
    "database": "GO",
    "name": "Gene Ontology Database",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/GO_",
    "generic_urls": [
      "http://amigo.geneontology.org/"
    ],
    "entity_types": [
      {
        "type_name": "molecular_function",
        "type_id": "GO:0003674",
        "id_syntax": "\\d{7}",
        "url_syntax": "http://amigo.geneontology.org/amigo/term/GO:[example_id]",
        "example_id": "GO:0004352",
        "example_url": "http://amigo.geneontology.org/amigo/term/GO:0004352"
      },
      {
        "type_name": "biological_process",
        "type_id": "GO:0008150",
        "id_syntax": "\\d{7}",
        "url_syntax": "http://amigo.geneontology.org/amigo/term/GO:[example_id]",
        "example_id": "GO:0044767",
        "example_url": "http://amigo.geneontology.org/amigo/term/GO:0044767"
      },
      {
        "type_name": "cellular_component",
        "type_id": "GO:0005575",
        "id_syntax": "\\d{7}",
        "url_syntax": "http://amigo.geneontology.org/amigo/term/GO:[example_id]",
        "example_id": "GO:0005634",
        "example_url": "http://amigo.geneontology.org/amigo/term/GO:0005634"
      },
      {
        "type_name": "macromolecular complex",
        "type_id": "GO:0032991",
        "id_syntax": "\\d{7}",
        "url_syntax": "http://amigo.geneontology.org/amigo/term/GO:[example_id]",
        "example_id": "GO:0044776",
        "example_url": "http://amigo.geneontology.org/amigo/term/GO:0044776"
      }
    ]
  },
  {
    "database": "GO_Central",
    "name": "GO Central",
    "synonyms": [
      "GO_CENTRAL"
    ],
    "description": "Manual annotation from PAINT curators into the UniProt Protein2GO curation tool.",
    "generic_urls": [
      "http://www.geneontology.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "GO_Noctua",
    "name": "GO Noctua",
    "description": "Manual annotation derived from LEGO annotations",
    "generic_urls": [
      "https://github.com/geneontology/noctua-models"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "GO_REF",
    "name": "Gene Ontology Database references",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/go/references/",
    "generic_urls": [
      "http://geneontology.org/gorefs"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "\\d{7}",
        "url_syntax": "http://purl.obolibrary.org/obo/go/references/[example_id]",
        "example_id": "0000001",
        "example_url": "http://purl.obolibrary.org/obo/go/references/0000002"
      }
    ]
  },
  {
    "database": "gomodel",
    "name": "Gene Ontology Causal Activity Model (GO-CAM)",
    "rdf_uri_prefix": "http://model.geneontology.org/",
    "generic_urls": [
      "https://geneontology.org/go-cam"
    ],
    "entity_types": [
      {
        "type_name": "model",
        "type_id": "BET:0000000",
        "url_syntax": "https://model.geneontology.org/[example_id]",
        "example_id": "gomodel:5ae3b0f600001522",
        "example_url": "https://model.geneontology.org/5ae3b0f600001522"
      }
    ]
  },
  {
    "database": "GOC",
    "name": "Gene Ontology Consortium",
    "generic_urls": [
      "http://www.geneontology.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "GOC-OWL",
    "name": "Gene Ontology Consortium - Logical inferences",
    "generic_urls": [
      "http://www.geneontology.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "GONUTS",
    "name": "Gene Ontology Normal Usage Tracking System (GONUTS)",
    "description": "Third party documentation for GO and community annotation system.",
    "generic_urls": [
      "http://gowiki.tamu.edu"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://gowiki.tamu.edu/wiki/index.php/[example_id]",
        "example_id": "GONUTS:MOUSE:CD28",
        "example_url": "https://gowiki.tamu.edu/wiki/index.php/MOUSE:CD28"
      }
    ]
  },
  {
    "database": "GOREL",
    "name": "GO Extensions to OBO Relation Ontology Ontology",
    "description": "Additional relations pending addition into RO",
    "generic_urls": [
      "http://purl.obolibrary.org/obo/ro"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "GR",
    "name": "Gramene",
    "generic_urls": [
      "http://www.gramene.org/"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "[A-Z][0-9][A-Z0-9]{3}[0-9]",
        "url_syntax": "http://www.gramene.org/db/searches/browser?search_type=All&RGN=on&query=[example_id]",
        "example_id": "GR:sd1",
        "example_url": "http://www.gramene.org/db/searches/browser?search_type=All&RGN=on&query=sd1"
      }
    ]
  },
  {
    "database": "GR_Ensembl",
    "name": "Gramene",
    "generic_urls": [
      "http://www.gramene.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://gramene.org/?idList=[example_id]",
        "example_id": "GR_Ensembl:At1g10040",
        "example_url": "http://gramene.org/?idList=At1g10040"
      }
    ]
  },
  {
    "database": "GR_GENE",
    "name": "Gramene",
    "synonyms": [
      "GR_gene"
    ],
    "rdf_uri_prefix": "http://identifiers.org/gramene.gene/",
    "generic_urls": [
      "http://www.gramene.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.gramene.org/db/genes/search_gene?acc=[example_id]",
        "example_id": "GR_GENE:GR:0060198",
        "example_url": "http://www.gramene.org/db/genes/search_gene?acc=GR:0060198"
      }
    ]
  },
  {
    "database": "GR_MUT",
    "name": "A Comparative Mapping Resource for Grains",
    "generic_urls": [
      "http://www.gramene.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.gramene.org/db/genes/search_gene?acc=[example_id]",
        "example_id": "GR_MUT:GR:0060198",
        "example_url": "http://www.gramene.org/db/genes/search_gene?acc=GR:0060198"
      }
    ]
  },
  {
    "database": "GR_PROTEIN",
    "name": "Gramene",
    "synonyms": [
      "GR_protein"
    ],
    "rdf_uri_prefix": "http://identifiers.org/gramene.protein/",
    "generic_urls": [
      "http://www.gramene.org/"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "[A-Z][0-9][A-Z0-9]{3}[0-9]",
        "url_syntax": "http://www.gramene.org/db/protein/protein_search?acc=[example_id]",
        "example_id": "GR_PROTEIN:Q6VSV0",
        "example_url": "http://www.gramene.org/db/protein/protein_search?acc=Q6VSV0"
      }
    ]
  },
  {
    "database": "GR_QTL",
    "name": "Gramene",
    "rdf_uri_prefix": "http://identifiers.org/gramene.qtl/",
    "generic_urls": [
      "http://www.gramene.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.gramene.org/db/qtl/qtl_display?qtl_accession_id=[example_id]",
        "example_id": "GR_QTL:CQU7",
        "example_url": "http://www.gramene.org/db/qtl/qtl_display?qtl_accession_id=CQU7"
      }
    ]
  },
  {
    "database": "GR_REF",
    "name": "Gramene",
    "generic_urls": [
      "http://www.gramene.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.gramene.org/db/literature/pub_search?ref_id=[example_id]",
        "example_id": "GR_REF:659",
        "example_url": "http://www.gramene.org/db/literature/pub_search?ref_id=659"
      }
    ]
  },
  {
    "database": "GRIN",
    "name": "Germplasm Resources Information Network",
    "synonyms": [
      "grin"
    ],
    "generic_urls": [
      "https://www.ars-grin.gov/"
    ],
    "entity_types": [
      {
        "type_name": "germplasm",
        "type_id": "BET:0000000",
        "url_syntax": "https://npgsweb.ars-grin.gov/gringlobal/accessiondetail.aspx?id=[example_id]",
        "example_id": "GRIN:1882640",
        "example_url": "https://npgsweb.ars-grin.gov/gringlobal/accessiondetail.aspx?id=1882640"
      }
    ]
  },
  {
    "database": "GRINDesc",
    "name": "Germplasm Resources Information Network",
    "generic_urls": [
      "https://www.ars-grin.gov/"
    ],
    "entity_types": [
      {
        "type_name": "germplasm descriptors",
        "type_id": "BET:0000000",
        "url_syntax": "https://npgsweb.ars-grin.gov/gringlobal/descriptordetail.aspx?id=[example_id]",
        "example_id": "GRINdesc:89033",
        "example_url": "https://npgsweb.ars-grin.gov/gringlobal/descriptordetail.aspx?id=89033"
      }
    ]
  },
  {
    "database": "H-invDB",
    "name": "H-invitational Database",
    "generic_urls": [
      "http://www.h-invitational.jp/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "H-invDB_cDNA",
    "name": "H-invitational Database",
    "generic_urls": [
      "http://www.h-invitational.jp/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.h-invitational.jp/hinv/spsoup/transcript_view?acc_id=[example_id]",
        "example_id": "H-invDB_cDNA:AK093148",
        "example_url": "http://www.h-invitational.jp/hinv/spsoup/transcript_view?acc_id=AK093149"
      }
    ]
  },
  {
    "database": "H-invDB_locus",
    "name": "H-invitational Database",
    "generic_urls": [
      "http://www.h-invitational.jp/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.h-invitational.jp/hinv/spsoup/locus_view?hix_id=[example_id]",
        "example_id": "H-invDB_locus:HIX0014446",
        "example_url": "http://www.h-invitational.jp/hinv/spsoup/locus_view?hix_id=HIX0014446"
      }
    ]
  },
  {
    "database": "HAMAP",
    "name": "High-quality Automated and Manual Annotation of microbial Proteomes",
    "generic_urls": [
      "http://hamap.expasy.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://hamap.expasy.org/unirule/[example_id]",
        "example_id": "HAMAP:MF_00031",
        "example_url": "http://hamap.expasy.org/unirule/MF_00131"
      }
    ]
  },
  {
    "database": "HGNC",
    "name": "HUGO Gene Nomenclature Committee",
    "rdf_uri_prefix": "http://identifiers.org/hgnc/",
    "generic_urls": [
      "http://www.genenames.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "[0-9]+",
        "url_syntax": "https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/HGNC:[example_id]",
        "example_id": "HGNC:29",
        "example_url": "https://www.genenames.org/data/gene-symbol-report/#!/hgnc_id/HGNC:29"
      }
    ]
  },
  {
    "database": "HPA",
    "name": "Human Protein Atlas tissue profile information",
    "generic_urls": [
      "http://www.proteinatlas.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.proteinatlas.org/tissue_profile.php?antibody_id=[example_id]",
        "example_id": "HPA:HPA000237",
        "example_url": "http://www.proteinatlas.org/tissue_profile.php?antibody_id=HPA000237"
      }
    ]
  },
  {
    "database": "HPA_antibody",
    "name": "Human Protein Atlas antibody information",
    "generic_urls": [
      "http://www.proteinatlas.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.proteinatlas.org/antibody_info.php?antibody_id=[example_id]",
        "example_id": "HPA_antibody:HPA000237",
        "example_url": "http://www.proteinatlas.org/antibody_info.php?antibody_id=HPA000237"
      }
    ]
  },
  {
    "database": "HUGO",
    "name": "Human Genome Organisation",
    "generic_urls": [
      "http://www.hugo-international.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "IAO",
    "name": "Information Artifact Ontology",
    "description": "Ontology of information entities, including ontology metadata relations.",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/IAO_",
    "generic_urls": [
      "http://purl.obolibrary.org/obo/iao"
    ]
  },
  {
    "database": "iBB",
    "name": "iBeetleBase",
    "description": "RNAi phenotypes for beetle (Tribolium) genes",
    "generic_urls": [
      "https://ibeetle-base.uni-goettingen.de/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://ibeetle-base.uni-goettingen.de/details|[example_id]",
        "example_id": "TC006055",
        "example_url": "https://ibeetle-base.uni-goettingen.de/details/TC006055"
      }
    ]
  },
  {
    "database": "IMG",
    "name": "Integrated Microbial Genomes; JGI web site for genome annotation",
    "generic_urls": [
      "http://img.jgi.doe.gov"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://img.jgi.doe.gov/cgi-bin/pub/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=[example_id]",
        "example_id": "IMG:640008772",
        "example_url": "http://img.jgi.doe.gov/cgi-bin/pub/main.cgi?section=GeneDetail&page=geneDetail&gene_oid=640008772"
      }
    ]
  },
  {
    "database": "IMGT_HLA",
    "name": "IMGT/HLA human major histocompatibility complex sequence database",
    "generic_urls": [
      "http://www.ebi.ac.uk/imgt/hla"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "IMGT_HLA:HLA00031"
      }
    ]
  },
  {
    "database": "IMGT_LIGM",
    "name": "ImMunoGeneTics database covering immunoglobulins and T-cell receptors",
    "description": "Database of immunoglobulins and T cell receptors from human and other vertebrates, with translation for fully annotated sequences.",
    "generic_urls": [
      "http://www.imgt.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "IMGT_LIGM:U03895"
      }
    ]
  },
  {
    "database": "IntAct",
    "name": "IntAct protein interaction database",
    "rdf_uri_prefix": "http://identifiers.org/intact/",
    "generic_urls": [
      "https://www.ebi.ac.uk/intact/"
    ],
    "entity_types": [
      {
        "type_name": "molecular interaction",
        "type_id": "BET:0000013",
        "id_syntax": "EBI-[0-9]+",
        "url_syntax": "https://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=[example_id]",
        "example_id": "IntAct:EBI-17086",
        "example_url": "https://www.ebi.ac.uk/intact/pages/interactions/interactions.xhtml?query=EBI-17086"
      },
      {
        "type_name": "protein-containing complex",
        "type_id": "GO:0032991",
        "id_syntax": "EBI-[0-9]+",
        "url_syntax": "http://www.ebi.ac.uk/complexportal/complex/[example_id]",
        "example_id": "IntAct:EBI-10205244",
        "example_url": "http://www.ebi.ac.uk/complexportal/complex/EBI-10205244"
      }
    ]
  },
  {
    "database": "InterPro",
    "name": "InterPro database of protein domains and motifs",
    "rdf_uri_prefix": "http://identifiers.org/interpro/",
    "synonyms": [
      "INTERPRO",
      "IPR"
    ],
    "generic_urls": [
      "http://www.ebi.ac.uk/interpro/"
    ],
    "entity_types": [
      {
        "type_name": "polypeptide region",
        "type_id": "SO:0000839",
        "id_syntax": "IPR\\d{6}",
        "url_syntax": "http://www.ebi.ac.uk/interpro/entry/[example_id]",
        "example_id": "InterPro:IPR000001",
        "example_url": "http://www.ebi.ac.uk/interpro/entry/IPR015421"
      }
    ]
  },
  {
    "database": "iPTMnet",
    "name": "iPTMnet protein post-translational modification database",
    "generic_urls": [
      "https://research.bioinformatics.udel.edu/iptmnet/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://research.bioinformatics.udel.edu/iptmnet/entry/[example_id]/",
        "example_id": "iPTM:P06493",
        "example_url": "https://research.bioinformatics.udel.edu/iptmnet/entry/P06493/"
      }
    ]
  },
  {
    "database": "IRIC",
    "name": "International Rice Research Institute",
    "generic_urls": [
      "https://oryzasnp.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://oryzasnp.org/_variety.zul?irisid=[example_id]",
        "example_id": "IRIS_313-8922",
        "example_url": "https://oryzasnp.org/_variety.zul?irisid=IRIS_313-8922"
      }
    ]
  },
  {
    "database": "IRGC",
    "name": "International Rice Genebank Collection",
    "generic_urls": [
      "https://www.genesys-pgr.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.genesys-pgr.org/acn/search?q=IRGC+[example_id]",
        "example_id": "IRGC:10012",
        "example_url": "https://www.genesys-pgr.org/acn/search?q=IRGC+10013"
      }
    ]
  },
  {
    "database": "ISBN",
    "name": "International Standard Book Number",
    "generic_urls": [
      "https://www.worldcat.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.worldcat.org/search?q=bn%3A[example_id]",
        "example_id": "ISBN:0781702534",
        "example_url": "https://www.worldcat.org/search?q=bn%3A0781702534"
      }
    ]
  },
  {
    "database": "ISSN",
    "name": "International Standard Serial Number",
    "generic_urls": [
      "http://www.issn.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "ISSN:1234-1231"
      }
    ]
  },
  {
    "database": "IUPHAR/BPS",
    "name": "IUPHAR/BPS Guide to Pharmacology",
    "generic_urls": [
      "https://www.guidetopharmacology.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "IUPHAR_GPCR",
    "name": "International Union of Pharmacology",
    "generic_urls": [
      "http://www.iuphar.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.guidetopharmacology.org/GRAC/FamilyDisplayForward?familyId=[example_id]",
        "example_id": "IUPHAR_GPCR:13",
        "example_url": "https://www.guidetopharmacology.org/GRAC/FamilyDisplayForward?familyId=13"
      }
    ]
  },
  {
    "database": "IUPHAR_RECEPTOR",
    "name": "International Union of Pharmacology",
    "generic_urls": [
      "http://www.iuphar.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.guidetopharmacology.org/GRAC/ObjectDisplayForward?objectId=[example_id]",
        "example_id": "IUPHAR_RECEPTOR:56",
        "example_url": "https://www.guidetopharmacology.org/GRAC/ObjectDisplayForward?objectId=56"
      }
    ]
  },
  {
    "database": "Jaiswal_Lab",
    "name": "Jaiswal_Lab",
    "generic_urls": [
      "http://wiki.plantontology.org/index.php/PO_REF:00008"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://wiki.plantontology.org/index.php/PO_REF:00008",
        "example_id": "Jaiswal_Lab:gene00002",
        "example_url": "http://wiki.plantontology.org/index.php/PO_REF:00008"
      }
    ]
  },
  {
    "database": "TIGRFAMS",
    "name": "TIGRFAMs HMM collection at the J. Craig Venter Institute",
    "synonyms": [
      "TIGR_TIGRFAMS"
    ],
    "generic_urls": [
      "http://tigrfams.jcvi.org/cgi-bin/index.cgi"
    ],
    "entity_types": [
      {
        "type_name": "polypeptide region",
        "type_id": "SO:0000839",
        "id_syntax": "TIGR[0-9]{5}",
        "url_syntax": "http://tigrfams.jcvi.org/cgi-bin/HmmReportPage.cgi?acc=[example_id]",
        "example_id": "TIGRFAMS:TIGR00254",
        "example_url": "http://tigrfams.jcvi.org/cgi-bin/HmmReportPage.cgi?acc=TIGR00254"
      }
    ]
  },
  {
    "database": "JSTOR",
    "name": "Digital archive of scholarly articles",
    "generic_urls": [
      "https://www.jstor.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.jstor.org/stable/[example_id]",
        "example_id": "JSTOR:3093870",
        "example_url": "https://www.jstor.org/stable/3093870"
      }
    ]
  },
  {
    "database": "KEGG",
    "name": "Kyoto Encyclopedia of Genes and Genomes",
    "generic_urls": [
      "http://www.genome.ad.jp/kegg/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "KEGG_ENZYME",
    "name": "KEGG Enzyme Database",
    "rdf_uri_prefix": "http://identifiers.org/kegg.enzyme/",
    "generic_urls": [
      "http://www.genome.jp/dbget-bin/www_bfind?enzyme"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "\\d(\\.\\d{1,2}){2}\\.\\d{1,3}",
        "url_syntax": "http://www.genome.jp/dbget-bin/www_bget?ec:[example_id]",
        "example_id": "KEGG_ENZYME:2.1.1.4",
        "example_url": "http://www.genome.jp/dbget-bin/www_bget?ec:2.1.1.4"
      }
    ]
  },
  {
    "database": "KEGG_LIGAND",
    "name": "KEGG LIGAND Database",
    "generic_urls": [
      "http://www.genome.ad.jp/kegg/docs/upd_ligand.html"
    ],
    "entity_types": [
      {
        "type_name": "chemical entity",
        "type_id": "CHEBI:24431",
        "id_syntax": "C\\d{5}",
        "url_syntax": "http://www.genome.jp/dbget-bin/www_bget?cpd:[example_id]",
        "example_id": "KEGG_LIGAND:C00577",
        "example_url": "http://www.genome.jp/dbget-bin/www_bget?cpd:C00577"
      }
    ]
  },
  {
    "database": "KEGG_PATHWAY",
    "name": "KEGG Pathways Database",
    "rdf_uri_prefix": "http://identifiers.org/kegg.pathway/",
    "generic_urls": [
      "http://www.genome.jp/kegg/pathway.html"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.genome.jp/dbget-bin/www_bget?path:[example_id]",
        "example_id": "KEGG_PATHWAY:ot00020",
        "example_url": "http://www.genome.jp/dbget-bin/www_bget?path:ot00020"
      }
    ]
  },
  {
    "database": "KEGG_REACTION",
    "name": "KEGG Reaction Database",
    "rdf_uri_prefix": "http://www.kegg.jp/entry/",
    "generic_urls": [
      "http://www.genome.jp/kegg/reaction/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "R\\d+",
        "url_syntax": "http://www.genome.jp/dbget-bin/www_bget?rn:[example_id]",
        "example_id": "KEGG:R02328",
        "example_url": "http://www.genome.jp/dbget-bin/www_bget?rn:R02328"
      }
    ]
  },
  {
    "database": "LIFEdb",
    "name": "LifeDB",
    "description": "LifeDB is a database for information on protein localization, interaction, functional assays and expression.",
    "generic_urls": [
      "http://www.lifedb.de/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.dkfz.de/en/mga/Groups/LIFEdb-Database.html?ID=[example_id]",
        "example_id": "LIFEdb:DKFZp564O1716",
        "example_url": "https://www.dkfz.de/en/mga/Groups/LIFEdb-Database.html?ID=DKFZp564O1716"
      }
    ]
  },
  {
    "database": "MA",
    "name": "Adult Mouse Anatomical Dictionary",
    "description": "Adult Mouse Anatomical Dictionary; part of Gene Expression Database",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/MA_",
    "generic_urls": [
      "http://www.informatics.jax.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.informatics.jax.org/searches/AMA.cgi?id=MA:[example_id]",
        "example_id": "MA:0000003",
        "example_url": "http://www.informatics.jax.org/searches/AMA.cgi?id=MA:0000003"
      }
    ]
  },
  {
    "database": "MACSC_REF",
    "name": "Maize Genetics and Genomics Database",
    "generic_urls": [
      "http://www.maizegdb.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.maizegdb.org/cgi-bin/displaytraitrecord.cgi?id=[example_id]",
        "example_id": "MACSC_REF:78112",
        "example_url": "http://www.maizegdb.org/cgi-bin/displaytraitrecord.cgi?id=78112"
      }
    ]
  },
  {
    "database": "MaizeGDB",
    "name": "MaizeGDB",
    "generic_urls": [
      "https://www.maizegdb.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://maizegdb.org/gene_center/gene/[example_id]",
        "example_id": "MaizeGDB:12098",
        "example_url": "https://maizegdb.org/gene_center/gene/12098"
      }
    ]
  },
  {
    "database": "MaizeGDB_Locus",
    "name": "MaizeGDB",
    "rdf_uri_prefix": "http://identifiers.org/maizegdb.locus/",
    "generic_urls": [
      "https://www.maizegdb.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "[A-Za-z][A-Za-z0-9]*",
        "url_syntax": "https://www.maizegdb.org/gene_center/gene/[example_id]",
        "example_id": "MaizeGDB_Locus:25011",
        "example_url": "https://www.maizegdb.org/gene_center/gene/25011"
      }
    ]
  },
  {
    "database": "MaizeGDB_QTL",
    "name": "Maize Genetics and Genomics Database",
    "generic_urls": [
      "https://www.maizegdb.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.maizegdb.org/data_center/trait?id=[example_id]",
        "example_id": "MaizeGDB_QTL:78112",
        "example_url": "https://www.maizegdb.org/data_center/trait?id=78112"
      }
    ]
  },
  {
    "database": "MaizeGDB_REF",
    "name": "Maize Genetics and Genomics Database",
    "generic_urls": [
      "https://www.maizegdb.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://maizegdb.org/data_center/reference?id=[example_id]",
        "example_id": "MaizeGDB_REF:9021423",
        "example_url": "http://maizegdb.org/data_center/reference?id=9021423"
      }
    ]
  },
  {
    "database": "MaizeGDB_stock",
    "name": "Maize Genetics and Genomics Database",
    "generic_urls": [
      "https://www.maizegdb.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://maizegdb.org/data_center/stock?id=[example_id]",
        "example_id": "MaizeGDB_stock:282110",
        "example_url": "https://maizegdb.org/data_center/stock?id=282110"
      }
    ]
  },
  {
    "database": "MEDLINE",
    "name": "Medline literature database",
    "generic_urls": [
      "http://www.nlm.nih.gov/databases/databases_medline.html"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "MEDLINE:20572430"
      }
    ]
  },
  {
    "database": "MEROPS",
    "name": "MEROPS peptidase database",
    "generic_urls": [
      "https://www.ebi.ac.uk/merops/"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "^[SCTAGMNU]\\d{2}\\.([AB]\\d{2}|\\d{3}|[A-Z]{3})$",
        "url_syntax": "https://www.ebi.ac.uk/merops/cgi-bin/pepsum?id=[example_id]",
        "example_id": "MEROPS:A08.001",
        "example_url": "https://www.ebi.ac.uk/merops/cgi-bin/pepsum?id=A08.001"
      }
    ]
  },
  {
    "database": "MEROPS_fam",
    "name": "MEROPS peptidase database",
    "generic_urls": [
      "https://www.ebi.ac.uk/merops"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "^[SCTAGMNU]\\d+$",
        "url_syntax": "https://www.ebi.ac.uk/merops/cgi-bin/famsum?family=[example_id]",
        "example_id": "MEROPS_fam:M18",
        "example_url": "https://www.ebi.ac.uk/merops/cgi-bin/famsum?family=M18"
      },
      {
        "type_name": "protein family",
        "type_id": "NCIT:C20130",
        "id_syntax": "^[SCTAGMNU]\\d+$",
        "url_syntax": "https://www.ebi.ac.uk/merops/cgi-bin/famsum?family=[example_id]",
        "example_id": "MEROPS_fam:M18",
        "example_url": "https://www.ebi.ac.uk/merops/cgi-bin/famsum?family=M18"
      }
    ]
  },
  {
    "database": "MeSH",
    "synonyms": [
      "MESH",
      "MSH"
    ],
    "name": "Medical Subject Headings",
    "generic_urls": [
      "https://meshb.nlm.nih.gov"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://id.nlm.nih.gov/mesh/[example_id]",
        "example_id": "MeSH:D017209",
        "example_url": "http://id.nlm.nih.gov/mesh/D017209"
      }
    ]
  },
  {
    "database": "MetaCyc",
    "name": "Metabolic Encyclopedia of metabolic and other pathways",
    "synonyms": [
      "METACYC"
    ],
    "rdf_uri_prefix": "http://identifiers.org/metacyc.reaction/",
    "generic_urls": [
      "https://metacyc.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "^[A-Za-z0-9+_.%-:]+$",
        "url_syntax": "https://biocyc.org/META/NEW-IMAGE?type=NIL&object=[example_id]",
        "example_id": "MetaCyc:GLUTDEG-PWY",
        "example_url": "https://biocyc.org/META/NEW-IMAGE?type=NIL&object=GLUTDEG-PWY"
      }
    ]
  },
  {
    "database": "MGCSC_GENETIC_STOCKS",
    "name": "Maize Genetics and Genomics Database",
    "generic_urls": [
      "http://www.maizegdb.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.maizegdb.org/cgi-bin/displaystockrecord.cgi?id=[example_id]",
        "example_id": "MGCSC_GENETIC_STOCKS:78112",
        "example_url": "http://www.maizegdb.org/cgi-bin/displaytraitrecord.cgi?id=78112"
      }
    ]
  },
  {
    "database": "MGD",
    "name": "Mouse Genome Database",
    "generic_urls": [
      "http://www.informatics.jax.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "MGD:Adcy9"
      }
    ]
  },
  {
    "database": "MGI",
    "name": "Mouse Genome Informatics",
    "rdf_uri_prefix": "http://identifiers.org/MGI/",
    "generic_urls": [
      "http://www.informatics.jax.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "MGI:[0-9]+",
        "url_syntax": "http://www.informatics.jax.org/accession/[example_id]",
        "example_id": "MGI:MGI:1345277",
        "example_url": "http://www.informatics.jax.org/accession/MGI:1345277"
      },
      {
        "type_name": "variation",
        "type_id": "VariO:0001",
        "id_syntax": "MGI:[0-9]+",
        "url_syntax": "http://www.informatics.jax.org/accession/[example_id]",
        "example_id": "MGI:MGI:3590672",
        "example_url": "http://www.informatics.jax.org/accession/MGI:3590672"
      }
    ]
  },
  {
    "database": "MIPS_funcat",
    "name": "MIPS Functional Catalogue",
    "generic_urls": [
      "http://mips.gsf.de/proj/funcatDB/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://mips.gsf.de/cgi-bin/proj/funcatDB/search_advanced.pl?action=2&wert=[example_id]",
        "example_id": "MIPS_funcat:11.02",
        "example_url": "http://mips.gsf.de/cgi-bin/proj/funcatDB/search_advanced.pl?action=2&wert=11.02"
      }
    ]
  },
  {
    "database": "MITRE",
    "name": "The MITRE Corporation",
    "generic_urls": [
      "http://www.mitre.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "ModBase",
    "name": "ModBase comprehensive Database of Comparative Protein Structure Models",
    "generic_urls": [
      "http://modbase.compbio.ucsf.edu/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://salilab.org/modbase/searchbyid?databaseID=[example_id]",
        "example_id": "ModBase:P10815",
        "example_url": "http://salilab.org/modbase/searchbyid?databaseID=P04848"
      }
    ]
  },
  {
    "database": "NASC_code",
    "name": "Nottingham Arabidopsis Stock Centre Seeds Database",
    "synonyms": [
      "NASC"
    ],
    "generic_urls": [
      "http://arabidopsis.info"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://seeds.nottingham.ac.uk/NASC/stockatidb.lasso?code=[example_id]",
        "example_id": "NASC_code:N3371",
        "example_url": "http://seeds.nottingham.ac.uk/NASC/stockatidb.lasso?code=N3371"
      }
    ]
  },
  {
    "database": "NC-IUBMB",
    "name": "Nomenclature Committee of the International Union of Biochemistry and Molecular Biology",
    "generic_urls": [
      "http://www.chem.qmw.ac.uk/iubmb/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "NCBI",
    "name": "National Center for Biotechnology Information",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "NCBIGene",
    "name": "NCBI Gene",
    "synonyms": [
      "GeneID",
      "LocusID",
      "NCBI_Gene"
    ],
    "rdf_uri_prefix": "http://identifiers.org/ncbigene/",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "\\d+",
        "url_syntax": "https://www.ncbi.nlm.nih.gov/gene/[example_id]",
        "example_id": "NCBI_Gene:4771",
        "example_url": "https://www.ncbi.nlm.nih.gov/gene/4771"
      }
    ]
  },
  {
    "database": "NCBI_gi",
    "name": "NCBI databases",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "[0-9]{5,}",
        "url_syntax": "http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=[example_id]",
        "example_id": "NCBI_gi:113194944",
        "example_url": "http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=113194944"
      }
    ]
  },
  {
    "database": "NCBI_GP",
    "name": "NCBI GenPept",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "[A-Z]{3}[0-9]{5}(\\.[0-9]+)?",
        "url_syntax": "https://www.ncbi.nlm.nih.gov/protein/[example_id]",
        "example_id": "NCBI_GP:EAL72968",
        "example_url": "https://www.ncbi.nlm.nih.gov/protein/EAL72968"
      }
    ]
  },
  {
    "database": "NCBI_locus_tag",
    "name": "NCBI locus tag",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "NCBI_locus_tag:CTN_0547"
      }
    ]
  },
  {
    "database": "NCBI_NP",
    "name": "NCBI Protein",
    "generic_urls": [
      "https://www.ncbi.nlm.nih.gov/protein"
    ]
  },
  {
    "database": "NIF_Subcellular",
    "name": "Neuroscience Information Framework standard ontology, subcellular hierarchy",
    "generic_urls": [
      "http://www.neurolex.org/wiki"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.neurolex.org/wiki/[example_id]",
        "example_id": "NIF_Subcellular:sao1186862860",
        "example_url": "http://www.neurolex.org/wiki/sao1770195789"
      }
    ]
  },
  {
    "database": "NTNU_SB",
    "name": "Norwegian University of Science and Technology, Systems Biology team",
    "generic_urls": [
      "http://www.ntnu.edu/nt/systemsbiology"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "OBI",
    "name": "Ontology for Biomedical Investigations",
    "generic_urls": [
      "http://obi-ontology.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "\\d{7}",
        "example_id": "OBI:0000038",
        "example_url": "http://purl.obolibrary.org/obo/OBI_0000038"
      }
    ]
  },
  {
    "database": "OBO_SF_PO",
    "name": "Source Forge OBO Plant Ontology (PO) term request tracker",
    "generic_urls": [
      "http://sourceforge.net/tracker/?func=browse&group_id=76834&atid=835555"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://sourceforge.net/tracker/index.php?func=detail&aid=[example_id]&group_id=76834&atid=835555",
        "example_id": "OBO_SF_PO:3184921",
        "example_url": "https://sourceforge.net/tracker/index.php?func=detail&aid=3184921&group_id=76834&atid=835555"
      }
    ]
  },
  {
    "database": "OBO_SF2_PO",
    "name": "Source Forge OBO Plant Ontology (PO) term request tracker",
    "generic_urls": [
      "https://sourceforge.net/p/obo/plant-ontology-po-term-requests/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://sourceforge.net/p/obo/plant-ontology-po-term-requests/[example_id]",
        "example_id": "OBO_SF2_PO:500",
        "example_url": "http://sourceforge.net/p/obo/plant-ontology-po-term-requests/500"
      }
    ]
  },
  {
    "database": "OBO_SF2_PECO",
    "name": "Source Forge OBO plant-experimental-conditions-ontology (PECO) term request tracker",
    "generic_urls": [
      "https://sourceforge.net/p/obo/plant-environment-ontology-eo/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://sourceforge.net/p/obo/plant-environment-ontology-eo/[example_id]",
        "example_id": "OBO_SF2_PECO:89",
        "example_url": "https://sourceforge.net/p/obo/plant-environment-ontology-eo/89/"
      }
    ]
  },
  {
    "database": "OMIM",
    "name": "Mendelian Inheritance in Man",
    "synonyms": [
      "MIM"
    ],
    "generic_urls": [
      "https://omim.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://omim.org/entry/[example_id]",
        "example_id": "OMIM:190198",
        "example_url": "https://omim.org/entry/190198"
      }
    ]
  },
  {
    "database": "OMSSA",
    "name": "Open Mass Spectrometry Search Algorithm",
    "generic_urls": [
      "http://pubchem.ncbi.nlm.nih.gov/omssa/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "PANTHER",
    "name": "Protein ANalysis THrough Evolutionary Relationships Classification System",
    "rdf_uri_prefix": "http://identifiers.org/panther.family/",
    "generic_urls": [
      "https://www.pantherdb.org/"
    ],
    "entity_types": [
      {
        "type_name": "protein family",
        "type_id": "NCIT:C20130",
        "id_syntax": "PTN[0-9]{9}|PTHR[0-9]{5}|PTHR[0-9]{5}:SF[0-9]+",
        "url_syntax": "https://www.pantherdb.org/panther/lookupId.jsp?id=[example_id]",
        "example_id": "PANTHER:PTHR11455",
        "example_url": "https://www.pantherdb.org/panther/lookupId.jsp?id=PTHR10000"
      }
    ]
  },
  {
    "database": "orcid",
    "name": "Open Researcher and Contributor",
    "description": "ORCID (Open Researcher and Contributor ID) is an open, non-profit, community-based effort to create and maintain a registry of unique identifiers for individual researchers.",
    "generic_urls": [
      "https://orcid.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "^\\d{4}-\\d{4}-\\d{4}-\\d{3}(\\d|X)$",
        "url_syntax": "https://orcid.org/[example_id]",
        "example_id": "orcid:0000-0003-4423-4370",
        "example_url": "https://orcid.org/0000-0003-4423-4370"
      }
    ]
  },
  {
    "database": "ParkinsonsUK-UCL",
    "name": "Parkinsons Disease Gene Ontology Initiative",
    "generic_urls": [
      "https://www.ucl.ac.uk/cardiovascular/research/pre-clinical-and-fundamental-science/functional-gene-annotation/neurological-gene"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "PATO",
    "name": "Phenotypic quality ontology",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/PATO_",
    "generic_urls": [
      "http://www.obofoundry.org/ontology/pato.html"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "PATO:0001420",
        "example_url": "http://purl.obolibrary.org/obo/PATO_0001420"
      }
    ]
  },
  {
    "database": "PATRIC",
    "name": "PathoSystems Resource Integration Center",
    "description": "PathoSystems Resource Integration Center at the Virginia Bioinformatics Institute",
    "generic_urls": [
      "https://www.patricbrc.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.patricbrc.org/view/Feature/[example_id]",
        "example_id": "PATRIC:fig%7C83332.12.peg.11",
        "example_url": "https://www.patricbrc.org/view/Feature/fig%7C83332.12.peg.1"
      }
    ]
  },
  {
    "database": "PDB",
    "name": "Protein Data Bank",
    "generic_urls": [
      "https://www.rcsb.org/pdb/"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "[A-Za-z0-9]{4}",
        "url_syntax": "https://www.rcsb.org/structure/[example_id]",
        "example_id": "PDB:1A4U",
        "example_url": "https://www.rcsb.org/structure/1A4U"
      }
    ]
  },
  {
    "database": "PECO_GIT",
    "name": "GitHub Issue Tracker for PECO",
    "generic_urls": [
      "https://github.com/Planteome/plant-experimental-conditions-ontology"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://github.com/Planteome/plant-environment-ontology/issues/[example_id]",
        "example_id": "PECO_GIT:76",
        "example_url": "https://github.com/Planteome/plant-experimental-conditions-ontology/issues/76"
      }
    ]
  },
  {
    "database": "Pfam",
    "name": "Pfam database of protein families",
    "description": "Pfam is a collection of protein families represented by sequence alignments and hidden Markov models (HMMs)",
    "generic_urls": [
      "https://www.ebi.ac.uk/interpro/entry/pfam"
    ],
    "entity_types": [
      {
        "type_name": "sequence feature",
        "type_id": "SO:0000110",
        "id_syntax": "PF[0-9]{5}",
        "url_syntax": "https://www.ebi.ac.uk/interpro/entry/pfam/[example_id]",
        "example_id": "Pfam:PF00046",
        "example_url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00069"
      },
      {
        "type_name": "polypeptide region",
        "type_id": "SO:0000839",
        "id_syntax": "PF[0-9]{5}",
        "url_syntax": "https://www.ebi.ac.uk/interpro/entry/pfam/[example_id]",
        "example_id": "Pfam:PF00046",
        "example_url": "https://www.ebi.ac.uk/interpro/entry/pfam/PF00069"
      }
    ]
  },
  {
    "database": "PharmGKB",
    "name": "Pharmacogenetics and Pharmacogenomics Knowledge Base",
    "generic_urls": [
      "https://www.pharmgkb.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.pharmgkb.org/do/serve?objId=[example_id]",
        "example_id": "PharmGKB:PA267",
        "example_url": "https://www.pharmgkb.org/do/serve?objId=PA267"
      }
    ]
  },
  {
    "database": "PhenoScape",
    "name": "PhenoScape Knowledgebase",
    "generic_urls": [
      "http://phenoscape.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "PHI-base",
    "name": "Pathogen-Host Interactions Database",
    "description": "PHI-base catalogues experimentally verified pathogenicity, virulence and effector genes from fungal, Oomycete and bacterial pathogens, which infect animal, plant, fungal and insect hosts.",
    "generic_urls": [
      "http://www.phi-base.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "PHI:[0-9]+",
        "url_syntax": "http://www.phi-base.org/searchFacet.htm?queryTerm=PHI:[example_id]",
        "example_id": "PHI:3",
        "example_url": "http://www.phi-base.org/searchFacet.htm?queryTerm=PHI:3"
      }
    ]
  },
  {
    "database": "PIR",
    "name": "Protein Information Resource",
    "generic_urls": [
      "https://proteininformationresource.org/"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "[A-Z]{1}[0-9]{5}",
        "url_syntax": "https://proteininformationresource.org/cgi-bin/nbrfget?uid=[example_id]",
        "example_id": "PIR:I49499",
        "example_url": "https://proteininformationresource.org/cgi-bin/nbrfget?uid=I49499"
      }
    ]
  },
  {
    "database": "PIRSF",
    "name": "PIR Superfamily Classification System",
    "generic_urls": [
      "http://pir.georgetown.edu/pirsf/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://pir.georgetown.edu/cgi-bin/ipcSF?id=[example_id]",
        "example_id": "PIRSF:SF002327",
        "example_url": "http://pir.georgetown.edu/cgi-bin/ipcSF?id=SF002327"
      }
    ]
  },
  {
    "database": "PlantSystematics_image_archive",
    "name": "PlantSystematics.org",
    "generic_urls": [
      "http://plantsystematics.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.plantsystematics.org/imagebyid_[example_id].html",
        "example_id": "PlantSystematics_image_archivee:37658",
        "example_url": "http://www.plantsystematics.org/imagebyid_37658.html"
      }
    ]
  },
  {
    "database": "PMCID",
    "name": "Pubmed Central",
    "synonyms": [
      "PMC"
    ],
    "generic_urls": [
      "https://www.ncbi.nlm.nih.gov/pmc/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.ncbi.nlm.nih.gov/pmc/articles/[example_id]",
        "example_id": "PMCID:PMC201377",
        "example_url": "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC201377/"
      }
    ]
  },
  {
    "database": "PMID",
    "name": "PubMed",
    "synonyms": [
      "PUBMED"
    ],
    "rdf_uri_prefix": "http://identifiers.org/pubmed/",
    "generic_urls": [
      "https://pubmed.ncbi.nlm.nih.gov/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "[0-9]+",
        "url_syntax": "https://pubmed.ncbi.nlm.nih.gov/[example_id]",
        "example_id": "PMID:31931324",
        "example_url": "https://pubmed.ncbi.nlm.nih.gov/31931324"
      }
    ]
  },
  {
    "database": "PO",
    "name": "Plant Ontology",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/PO_",
    "generic_urls": [
      "http://www.planteome.org/"
    ],
    "entity_types": [
      {
        "type_name": "plant anatomical entity",
        "type_id": "PO:0025131",
        "id_syntax": "[0-9]{7}",
        "url_syntax": "http://browser.planteome.org/amigo/term/PO:[example_id]",
        "example_id": "PO:0009004",
        "example_url": "http://browser.planteome.org/amigo/term/PO:0009004"
      },
      {
        "type_name": "plant structure development stage",
        "type_id": "PO:0009012",
        "id_syntax": "[0-9]{7}",
        "url_syntax": "http://browser.planteome.org/amigo/term/PO:[example_id]",
        "example_id": "PO:0025131",
        "example_url": "http://browser.planteome.org/amigo/term/PO:0025131"
      }
    ]
  },
  {
    "database": "PO_GIT",
    "name": "GitHub Issue Tracker for PO",
    "generic_urls": [
      "https://github.com/Planteome/plant-ontology"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://github.com/Planteome/plant-ontology/issues/[example_id]",
        "example_id": "PO_GIT:626",
        "example_url": "https://github.com/Planteome/plant-ontology/issues/626"
      }
    ]
  },
  {
    "database": "PO_REF",
    "name": "Plant Ontology custom references",
    "generic_urls": [
      "http://planteome.org/po_ref"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://planteome.org/po_ref/[example_id]",
        "example_id": "PO_REF:00001",
        "example_url": "http://planteome.org/po_ref/00001"
      }
    ]
  },
  {
    "database": "PlasmoDB",
    "name": "PlasmoDB",
    "rdf_uri_prefix": "http://identifiers.org/plasmodb/",
    "generic_urls": [
      "https://plasmodb.org"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "PF3D7_[0-9]{7}",
        "url_syntax": "https://plasmodb.org/plasmo/app/record/gene/[example_id]",
        "example_id": "PF3D7_1467300",
        "example_url": "https://plasmodb.org/plasmo/app/record/gene/PF3D7_1467300"
      }
    ]
  },
  {
    "database": "POC",
    "name": "Plant Ontology Consortium",
    "generic_urls": [
      "http://www.plantontology.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "PomBase",
    "name": "PomBase",
    "rdf_uri_prefix": "http://identifiers.org/pombase/",
    "generic_urls": [
      "https://www.pombase.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "S\\w+(\\.)?\\w+(\\.)?",
        "url_syntax": "https://www.pombase.org/gene/[example_id]",
        "example_id": "PomBase:SPBC11B10.09",
        "example_url": "https://www.pombase.org/gene/SPBC11B10.09"
      },
      {
        "type_name": "transcript",
        "type_id": "SO:0000673",
        "id_syntax": "S\\w+(\\.)?\\w+(\\.)?\\d+",
        "url_syntax": "https://www.pombase.org/gene/[example_id]",
        "example_id": "PomBase:SPCC548.03c.2",
        "example_url": "https://www.pombase.org/gene/SPCC548.03c.2"
      }
    ]
  },
  {
    "database": "Pompep",
    "name": "Schizosaccharomyces pombe protein data",
    "generic_urls": [
      "https://www.pombase.org/downloads/protein-datasets"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "example_id": "Pompep:SPAC890.04C"
      }
    ]
  },
  {
    "database": "PPI",
    "name": "Pseudomonas syringae community annotation project",
    "generic_urls": [
      "http://www.pseudomonas-syringae.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "PR",
    "name": "Protein Ontology",
    "synonyms": [
      "PRO"
    ],
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/PR_",
    "generic_urls": [
      "https://proconsortium.org/"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "([OPQ][0-9][A-Z0-9]{3}[0-9]|[A-NR-Z][0-9]([A-Z][A-Z0-9]{2}[0-9]){1,2}){1}(-[0-9]+){0,1}|[0-9]{9}",
        "url_syntax": "https://purl.obolibrary.org/obo/PR_[example_id]",
        "example_id": "PR:Q64445",
        "example_url": "https://purl.obolibrary.org/obo/PR_000060258"
      }
    ]
  },
  {
    "database": "PRINTS",
    "name": "PRINTS compendium of protein fingerprints",
    "generic_urls": [
      "http://www.bioinf.manchester.ac.uk/dbbrowser/PRINTS/"
    ],
    "entity_types": [
      {
        "type_name": "polypeptide region",
        "type_id": "SO:0000839",
        "id_syntax": "PR[0-9]{5}",
        "url_syntax": "http://www.bioinf.manchester.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&regexpr=off&prints_accn=[example_id]",
        "example_id": "PRINTS:PR00025",
        "example_url": "http://www.bioinf.manchester.ac.uk/cgi-bin/dbbrowser/sprint/searchprintss.cgi?display_opts=Prints&category=None&queryform=false&regexpr=off&prints_accn=PR00025"
      }
    ]
  },
  {
    "database": "Prosite",
    "name": "Prosite database of protein families and domains",
    "generic_urls": [
      "https://prosite.expasy.org/"
    ],
    "entity_types": [
      {
        "type_name": "polypeptide region",
        "type_id": "SO:0000839",
        "id_syntax": "PDOC[0-9]{5}",
        "url_syntax": "https://prosite.expasy.org/[example_id]",
        "example_id": "PDOC00314",
        "example_url": "https://prosite.expasy.org/PDOC00314"
      }
    ]
  },
  {
    "database": "protein_id",
    "name": "DDBJ / ENA / GenBank",
    "description": "protein identifier shared by DDBJ/EMBL-bank/GenBank nucleotide sequence databases",
    "generic_urls": [
      "http://www.ddbj.nig.ac.jp/",
      "http://www.ebi.ac.uk/ena/",
      "http://www.ncbi.nlm.nih.gov/Genbank/"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "[A-Z]{3}[0-9]{5}(\\.[0-9]+)?",
        "example_id": "protein_id:CAA71991"
      }
    ]
  },
  {
    "database": "PseudoCAP",
    "name": "Pseudomonas Genome Project",
    "generic_urls": [
      "http://www.pseudomonas.com"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.pseudomonas.com/feature/show?locus_tag=[example_id]",
        "example_id": "PseudoCAP:PA4756",
        "example_url": "http://www.pseudomonas.com/feature/show?locus_tag=PA4756"
      }
    ]
  },
  {
    "database": "PSO_GIT",
    "name": "GitHub Issue Tracker for PSO",
    "generic_urls": [
      "https://github.com/Planteome/plant-stress-ontology"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://github.com/Planteome/plant-stress-ontology/issues/[example_id]",
        "example_id": "PSO_GIT:169",
        "example_url": "https://github.com/Planteome/plant-stress-ontology/issues/169"
      }
    ]
  },
  {
    "database": "PSI-MI",
    "name": "Proteomic Standard Initiative for Molecular Interaction",
    "synonyms": [
      "MI"
    ],
    "generic_urls": [
      "http://www.psidev.info/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://purl.obolibrary.org/obo/",
        "example_id": "MI_0018",
        "example_url": "http://purl.obolibrary.org/obo/MI_0018"
      }
    ]
  },
  {
    "database": "PSI-MOD",
    "name": "Proteomics Standards Initiative protein modification ontology",
    "synonyms": [
      "MOD"
    ],
    "generic_urls": [
      "http://www.psidev.info/groups/protein-modifications"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://purl.obolibrary.org/obo/[example_id]",
        "example_id": "MOD_00219",
        "example_url": "http://purl.obolibrary.org/obo/MOD_00219"
      }
    ]
  },
  {
    "database": "PSORT",
    "name": "PSORT protein subcellular localization databases and prediction tools for bacteria",
    "generic_urls": [
      "https://www.psort.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "PubChem_BioAssay",
    "name": "NCBI PubChem database of bioassay records",
    "generic_urls": [
      "https://pubchem.ncbi.nlm.nih.gov"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://pubchem.ncbi.nlm.nih.gov/bioassay/[example_id]",
        "example_id": "PubChem_BioAssay:177",
        "example_url": "https://pubchem.ncbi.nlm.nih.gov/bioassay/177"
      }
    ]
  },
  {
    "database": "PubChem_Compound",
    "name": "NCBI PubChem database of chemical structures",
    "generic_urls": [
      "https://pubchem.ncbi.nlm.nih.gov"
    ],
    "entity_types": [
      {
        "type_name": "chemical entity",
        "type_id": "CHEBI:24431",
        "id_syntax": "[0-9]+",
        "url_syntax": "https://pubchem.ncbi.nlm.nih.gov/compound/[example_id]",
        "example_id": "PubChem_Compound:159296",
        "example_url": "https://pubchem.ncbi.nlm.nih.gov/compound/159296"
      }
    ]
  },
  {
    "database": "PubChem_Substance",
    "name": "NCBI PubChem database of chemical substances",
    "generic_urls": [
      "https://pubchem.ncbi.nlm.nih.gov"
    ],
    "entity_types": [
      {
        "type_name": "chemical entity",
        "type_id": "CHEBI:24431",
        "id_syntax": "[0-9]{4,}",
        "url_syntax": "https://pubchem.ncbi.nlm.nih.gov/substance/[example_id]",
        "example_id": "PubChem_Substance:4594",
        "example_url": "https://pubchem.ncbi.nlm.nih.gov/substance/4594"
      }
    ]
  },
  {
    "database": "RAP-DB",
    "name": "Rice annotation Project database",
    "generic_urls": [
      "https://rapdb.dna.affrc.go.jp"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://rapdb.dna.affrc.go.jp/viewer/gene_detail/irgsp1?name=[example_id]",
        "example_id": "RAP-DB:Os01t0100600-01",
        "example_url": "https://rapdb.dna.affrc.go.jp/viewer/gene_detail/irgsp1?name=Os01t0100600-01"
      }
    ]
  },
  {
    "database": "Reactome",
    "name": "Reactome - a curated knowledgebase of biological pathways",
    "synonyms": [
      "REACTOME",
      "REAC"
    ],
    "rdf_uri_prefix": "http://identifiers.org/reactome/",
    "generic_urls": [
      "https://www.reactome.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "R-[A-Z]{3}-[0-9]+(-[0-9]+){0,1}(\\.[0-9]+){0,1}",
        "url_syntax": "https://www.reactome.org/content/detail/[example_id]",
        "example_id": "Reactome:R-HSA-109582",
        "example_url": "https://www.reactome.org/content/detail/R-HSA-109582"
      }
    ]
  },
  {
    "database": "REBASE",
    "name": "REBASE restriction enzyme database",
    "generic_urls": [
      "http://rebase.neb.com/rebase/rebase.html"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://rebase.neb.com/rebase/enz/[example_id].html",
        "example_id": "REBASE:EcoRI",
        "example_url": "http://rebase.neb.com/rebase/enz/EcoRI.html"
      }
    ]
  },
  {
    "database": "RefGenome",
    "name": "GO Reference Genomes",
    "synonyms": [
      "REFGENOME"
    ],
    "generic_urls": [
      "http://www.geneontology.org/GO.refgenome.shtml"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "RefSeq",
    "name": "RefSeq",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/RefSeq/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "(NC|AC|NG|NT|NW|NZ|NM|NR|XM|XR|NP|AP|XP|YP|ZP)_[0-9]+(\\.[0-9]+){0,1}",
        "url_syntax": "http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=[example_id]",
        "example_id": "RefSeq:XP_001068954",
        "example_url": "http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=XP_001068954"
      },
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "(NC|AC|NG|NT|NW|NZ|NM|NR|XM|XR|NP|AP|XP|YP|ZP)_[0-9]+(\\.[0-9]+){0,1}",
        "url_syntax": "https://www.ncbi.nlm.nih.gov/protein/[example_id]",
        "example_id": "RefSeq:XP_001068954",
        "example_url": "https://www.ncbi.nlm.nih.gov/protein/NP_001121125"
      }
    ]
  },
  {
    "database": "RESID",
    "name": "RESID Database of Protein Modifications",
    "generic_urls": [
      "https://proteininformationresource.org/resid/resid.shtml"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "AA[0-9]{4}",
        "url_syntax": "https://proteininformationresource.org/cgi-bin/resid?id=[example_id]",
        "example_id": "RESID:AA0062",
        "example_url": "https://proteininformationresource.org/cgi-bin/resid?id=AA0062"
      }
    ]
  },
  {
    "database": "Rfam",
    "name": "Rfam database of RNA families",
    "generic_urls": [
      "https://rfam.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://rfam.org/family/[example_id]",
        "example_id": "Rfam:RF00012",
        "example_url": "https://rfam.org/family/RF00012"
      }
    ]
  },
  {
    "database": "RGD",
    "name": "Rat Genome Database",
    "synonyms": [
      "RAD",
      "RGDID"
    ],
    "rdf_uri_prefix": "http://identifiers.org/rgd/",
    "generic_urls": [
      "https://rgd.mcw.edu/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "[0-9]{4,8}",
        "url_syntax": "https://rgd.mcw.edu/rgdweb/search/search.html?term=[example_id]",
        "example_id": "RGD:2004",
        "example_url": "https://rgd.mcw.edu/rgdweb/search/search.html?term=2004"
      }
    ]
  },
  {
    "database": "RHEA",
    "name": "Rhea, the Annotated Reactions Database",
    "description": "Rhea is a manually annotated database of chemical reactions. All data in Rhea is freely accessible and available for anyone to use.",
    "rdf_uri_prefix": "http://rdf.rhea-db.org/",
    "generic_urls": [
      "https://www.rhea-db.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.rhea-db.org/rhea/[example_id]",
        "example_id": "RHEA:25811",
        "example_url": "https://www.rhea-db.org/rhea/25811"
      }
    ]
  },
  {
    "database": "RiceSES",
    "name": "Rice Knowledge Bank",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/PubMed/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.knowledgebank.irri.org/extension/crop-damage-diseases/[example_id].html",
        "example_id": "RiceSES:bakanae-diseases-bak",
        "example_url": "http://www.knowledgebank.irri.org/extension/crop-damage-diseases/bakanae-diseases-bak.html"
      }
    ]
  },
  {
    "database": "RNAcentral",
    "name": "RNAcentral",
    "description": "An international database of ncRNA sequences",
    "generic_urls": [
      "https://rnacentral.org"
    ],
    "entity_types": [
      {
        "type_name": "ribonucleic acid",
        "type_id": "CHEBI:33697",
        "id_syntax": "URS[0-9A-F]{10}([_\\/][0-9]+){0,1}",
        "url_syntax": "https://rnacentral.org/rna/[example_id]",
        "example_id": "RNAcentral:URS000047C79B_9606",
        "example_url": "https://rnacentral.org/rna/URS000047C79B_9606"
      }
    ]
  },
  {
    "database": "RNAmods",
    "name": "RNA Modification Database",
    "synonyms": [
      "RNAMDB"
    ],
    "generic_urls": [
      "https://mods.rna.albany.edu/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://mods.rna.albany.edu/mods/modifications/view/[example_id]",
        "example_id": "RNAmods:20",
        "example_url": "https://mods.rna.albany.edu/mods/modifications/view/20"
      }
    ]
  },
  {
    "database": "RO",
    "name": "OBO Relation Ontology Ontology",
    "description": "A collection of relations used across OBO ontologies",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/RO_",
    "generic_urls": [
      "http://purl.obolibrary.org/obo/ro"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://purl.obolibrary.org/obo/RO_[example_id]",
        "example_id": "RO:0002211",
        "example_url": "http://purl.obolibrary.org/obo/RO_0002211"
      }
    ]
  },
  {
    "database": "SABIO-RK",
    "name": "SABIO Reaction Kinetics",
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    "generic_urls": [
      "http://sabio.villa-bosch.de/"
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    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://sabio.villa-bosch.de/reacdetails.jsp?reactid=[example_id]",
        "example_id": "SABIO-RK:1858",
        "example_url": "http://sabio.villa-bosch.de/reacdetails.jsp?reactid=1858"
      }
    ]
  },
  {
    "database": "Sanger",
    "name": "Wellcome Trust Sanger Institute",
    "generic_urls": [
      "http://www.sanger.ac.uk/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "SEED",
    "name": "The SEED;",
    "description": "Project to annotate the first 1000 sequenced genomes, develop detailed metabolic reconstructions, and construct the corresponding stoichiometric matrices",
    "generic_urls": [
      "http://www.theseed.org"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.theseed.org/linkin.cgi?id=[example_id]",
        "example_id": "SEED:fig|83331.1.peg.1",
        "example_url": "http://www.theseed.org/linkin.cgi?id=fig|83331.1.peg.1"
      }
    ]
  },
  {
    "database": "SGD",
    "name": "Saccharomyces Genome Database",
    "synonyms": [
      "SGDID"
    ],
    "rdf_uri_prefix": "http://identifiers.org/sgd/",
    "generic_urls": [
      "http://www.yeastgenome.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "S[0-9]{9}",
        "url_syntax": "https://www.yeastgenome.org/search?q=[example_id]&is_quick=true",
        "example_id": "SGD:S000006169",
        "example_url": "https://www.yeastgenome.org/search?q=S000006169&is_quick=true"
      }
    ]
  },
  {
    "database": "SGD_LOCUS",
    "name": "Saccharomyces Genome Database",
    "generic_urls": [
      "http://www.yeastgenome.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.yeastgenome.org/search?q=[example_id]&is_quick=true",
        "example_id": "SGD_LOCUS:GAL4",
        "example_url": "https://www.yeastgenome.org/search?q=S000006169&is_quick=true"
      }
    ]
  },
  {
    "database": "SGD_REF",
    "name": "Saccharomyces Genome Database",
    "generic_urls": [
      "http://www.yeastgenome.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.yeastgenome.org/reference/[example_id]/overview",
        "example_id": "SGD_REF:S000049602",
        "example_url": "http://www.yeastgenome.org/reference/S000049602/overview"
      }
    ]
  },
  {
    "database": "SGD_PWY",
    "name": "Saccharomyces Genome Database YeastPathways",
    "generic_urls": [
      "https://pathway.yeastgenome.org/"
    ],
    "entity_types": [
      {
        "type_name": "vocabulary",
        "type_id": "SIO:001080",
        "id_syntax": "[A-Z0-9]+(?:-[A-Z0-9]+)*",
        "url_syntax": "https://pathway.yeastgenome.org/YEAST/NEW-IMAGE?type=NIL&object=[example_id]",
        "example_id": "SGD_PWY:SERSYN-PWY",
        "example_url": "https://pathway.yeastgenome.org/YEAST/NEW-IMAGE?type=NIL&object=SERSYN-PWY"
      }
    ]
  },
  {
    "database": "SGN",
    "name": "Sol Genomics Network",
    "synonyms": [
      "SGN_gene"
    ],
    "rdf_uri_prefix": "http://identifiers.org/sgn/",
    "generic_urls": [
      "https://www.sgn.cornell.edu/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "url_syntax": "http://solgenomics.net/phenome/locus_display.pl?locus_id=[example_id]",
        "example_id": "SGN_gene:7740",
        "example_url": "http://solgenomics.net/phenome/locus_display.pl?locus_id=7740"
      }
    ]
  },
  {
    "database": "SGN_ref",
    "name": "Sol Genomics Network",
    "generic_urls": [
      "https://www.sgn.cornell.edu/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://sgn.cornell.edu/chado/publication.pl?pub_id=[example_id]",
        "example_id": "SGN_ref:861",
        "example_url": "https://sgn.cornell.edu/chado/publication.pl?pub_id=861"
      }
    ]
  },
  {
    "database": "SGN_germplasm",
    "name": "Sol Genomics Network",
    "generic_urls": [
      "https://solgenomics.net/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://solgenomics.net/stock/[example_id]/view/",
        "example_id": "SGN_germplasm:6583",
        "example_url": "http://solgenomics.net/stock/6583/view/"
      }
    ]
  },
  {
    "database": "SMART",
    "name": "Simple Modular Architecture Research Tool",
    "generic_urls": [
      "http://smart.embl-heidelberg.de/"
    ],
    "entity_types": [
      {
        "type_name": "polypeptide region",
        "type_id": "SO:0000839",
        "url_syntax": "http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=[example_id]",
        "example_id": "SMART:SM00005",
        "example_url": "http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00005"
      }
    ]
  },
  {
    "database": "SO",
    "name": "Sequence Ontology",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/SO_",
    "generic_urls": [
      "http://www.sequenceontology.org/"
    ],
    "entity_types": [
      {
        "type_name": "sequence attribute",
        "type_id": "SO:0000400",
        "id_syntax": "\\d{7}",
        "url_syntax": "http://www.sequenceontology.org/browser/current_svn/term/SO:[example_id]",
        "example_id": "SO:0000400",
        "example_url": "http://www.sequenceontology.org/browser/current_svn/term/SO:0000400"
      },
      {
        "type_name": "sequence feature",
        "type_id": "SO:0000110",
        "id_syntax": "\\d{7}",
        "url_syntax": "http://www.sequenceontology.org/browser/current_svn/term/SO:[example_id]",
        "example_id": "SO:0000307",
        "example_url": "http://www.sequenceontology.org/browser/current_svn/term/SO:0000307"
      },
      {
        "type_name": "sequence motif",
        "type_id": "SO:0001683",
        "id_syntax": "\\d{7}",
        "url_syntax": "http://www.sequenceontology.org/browser/current_svn/term/SO:[example_id]",
        "example_id": "SO:0001166",
        "example_url": "http://www.sequenceontology.org/browser/current_svn/term/SO:0001166"
      }
    ]
  },
  {
    "database": "Soy_gene",
    "name": "SoyBase",
    "generic_urls": [
      "https://soybase.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.soybase.org/sbt/search/search_results.php?category=FeatureName&search_term=[example_id]",
        "example_id": "Glyma18g02210",
        "example_url": "https://www.soybase.org/sbt/search/search_results.php?category=FeatureName&search_term=Glyma18g02210"
      }
    ]
  },
  {
    "database": "SOY_QTL",
    "name": "SoyBase",
    "generic_urls": [
      "https://soybase.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.soybase.org/sbt/search/search_results.php?category=QTLName&search_term=[example_id]",
        "example_id": "Seedling, abnormal+1-1",
        "example_url": "https://www.soybase.org/sbt/search/search_results.php?category=QTLName&search_term=Seedling,+abnormal+1-1"
      }
    ]
  },
  {
    "database": "SOY_ref",
    "name": "SoyBase",
    "generic_urls": [
      "https://soybase.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.soybase.org/sbt/search/search_results.php?category=Soybase_ID&search_term=[example_id]",
        "example_id": "SOY ref:SoyBase6597900",
        "example_url": "https://www.soybase.org/sbt/search/search_results.php?category=Soybase_ID&search_term=SoyBase3142000126"
      }
    ]
  },
  {
    "database": "SUPERFAMILY",
    "name": "SUPERFAMILY protein annotation database",
    "description": "A database of structural and functional protein annotations for completely sequenced genomes",
    "generic_urls": [
      "http://supfam.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://supfam.org/scop/[example_id]",
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        "example_url": "http://supfam.org/scop/56994"
      }
    ]
  },
  {
    "database": "SynGO",
    "name": "The Synapse Gene Ontology and Annotation Initiative",
    "generic_urls": [
      "https://www.syngoportal.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "SynGO-UCL",
    "name": "The Synapse Gene Ontology and Annotation Initiative at UCL",
    "generic_urls": [
      "https://www.ucl.ac.uk/cardiovascular/research/pre-clinical-and-fundamental-science/functional-gene-annotation/neurological-gene-2"
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        "type_name": "entity",
        "type_id": "BET:0000000"
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    ]
  },
  {
    "database": "SYSCILIA_CCNET",
    "name": "Syscilia",
    "description": "A systems biology approach to dissect cilia function and its disruption in human genetic disease",
    "generic_urls": [
      "http://syscilia.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
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    ]
  },
  {
    "database": "TAIR",
    "name": "The Arabidopsis Information Resource",
    "rdf_uri_prefix": "https://registry.identifiers.org/registry/tair.name",
    "generic_urls": [
      "http://www.arabidopsis.org/"
    ],
    "entity_types": [
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        "type_name": "communication",
        "type_id": "BET:0000000",
        "id_syntax": "Communication:[0-9]{7,12}",
        "url_syntax": "https://www.arabidopsis.org/communication?key=[example_id]",
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        "example_url": "https://www.arabidopsis.org/communication?key=1345790"
      },
      {
        "type_name": "analysisreference",
        "type_id": "BET:0000000",
        "id_syntax": "analysisreference:[0-9]{7,12}",
        "url_syntax": "https://www.arabidopsis.org/analysisreference?key=[example_id]",
        "example_id": "TAIR:AnalysisReference:501780126",
        "example_url": "https://www.arabidopsis.org/analysisreference?key=501780126"
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    ]
  },
  {
    "database": "NCBITaxon",
    "name": "NCBI Taxonomy",
    "synonyms": [
      "taxon",
      "ncbi_taxid"
    ],
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/NCBITaxon_",
    "generic_urls": [
      "http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html/"
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    "entity_types": [
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        "type_name": "entity",
        "type_id": "BET:0000000",
        "id_syntax": "NCBITaxon[0-9]+",
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        "example_url": "http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=3702"
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    ]
  },
  {
    "database": "TC",
    "name": "Transport Protein Database",
    "rdf_uri_prefix": "http://identifiers.org/tcdb/",
    "generic_urls": [
      "http://www.tcdb.org/"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "[0-9]+\\.[A-Z](\\.[0-9]+)+",
        "url_syntax": "http://www.tcdb.org/tcdb/index.php?tc=[example_id]",
        "example_id": "TC:9.A.4.1.1",
        "example_url": "http://www.tcdb.org/tcdb/index.php?tc=9.A.4.1.1"
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    ]
  },
  {
    "database": "TGD",
    "name": "Tetrahymena Genome Database",
    "rdf_uri_prefix": "http://identifiers.org/tgd/",
    "generic_urls": [
      "http://www.ciliate.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "TGD_LOCUS",
    "name": "Tetrahymena Genome Database",
    "generic_urls": [
      "http://www.ciliate.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://db.ciliate.org/cgi-bin/locus.pl?locus=[example_id]",
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    ]
  },
  {
    "database": "TGD_REF",
    "name": "Tetrahymena Genome Database",
    "generic_urls": [
      "http://www.ciliate.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://db.ciliate.org/cgi-bin/reference/reference.pl?dbid=[example_id]",
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    "database": "TO_GIT",
    "name": "GitHub Issue Tracker for TO",
    "generic_urls": [
      "https://github.com/Planteome/plant-trait-ontology"
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    "entity_types": [
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        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://github.com/Planteome/plant-trait-ontology/issues/[example_id]",
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      }
    ]
  },
  {
    "database": "TRANSFAC",
    "name": "TRANSFAC database of eukaryotic transcription factors",
    "generic_urls": [
      "http://www.gene-regulation.com/pub/databases.html#transfac"
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      {
        "type_name": "entity",
        "type_id": "BET:0000000"
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    "database": "TreeGenes",
    "name": "Forest Tree Genome Database",
    "generic_urls": [
      "http://dendrome.ucdavis.edu/treegenes/"
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    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://dendrome.ucdavis.edu/treegenes/protein/view_protein.php?id=[example_id]",
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      }
    ]
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    "database": "TriTrypDB",
    "name": "TriTrypDB",
    "rdf_uri_prefix": "http://identifiers.org/tritrypdb/",
    "generic_urls": [
      "https://tritrypdb.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "((LmjF|LinJ|LmxM|LINF)\\.[0-9]{2}\\.[0-9]{4})|(Tb[0-9]+\\.[A-Za-z0-9]+\\.[0-9]+)|(Tb\\.[0-9]{6}\\.[0-9]+)|",
        "url_syntax": "https://tritrypdb.org/tritrypdb/app/record/gene/[example_id]",
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        "example_url": "https://tritrypdb.org/tritrypdb/app/record/gene/Tb927.1.630"
      }
    ]
  },
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    "database": "UBERON",
    "name": "Uber-anatomy ontology",
    "description": "A multi-species anatomy ontology",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/UBERON_",
    "generic_urls": [
      "http://uberon.org"
    ],
    "entity_types": [
      {
        "type_name": "anatomical entity",
        "type_id": "CARO:0000000",
        "id_syntax": "[0-9]{7}",
        "url_syntax": "http://purl.obolibrary.org/obo/UBERON_[example_id]",
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        "example_url": "http://purl.obolibrary.org/obo/UBERON_0002398"
      },
      {
        "type_name": "life cycle stage",
        "type_id": "UBERON:0000105",
        "id_syntax": "[0-9]{7}",
        "url_syntax": "http://purl.obolibrary.org/obo/UBERON_[example_id]",
        "example_id": "UBERON:0000069"
      }
    ]
  },
  {
    "database": "UM-BBD",
    "name": "EAWAG Biocatalysis/Biodegradation Database",
    "generic_urls": [
      "http://eawag-bbd.ethz.ch/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "UM-BBD_enzymeID",
    "name": "EAWAG Biocatalysis/Biodegradation Database",
    "generic_urls": [
      "http://eawag-bbd.ethz.ch/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://eawag-bbd.ethz.ch/servlets/pageservlet?ptype=ep&enzymeID=[example_id]",
        "example_id": "UM-BBD_enzymeID:e0413",
        "example_url": "http://eawag-bbd.ethz.ch/servlets/pageservlet?ptype=ep&enzymeID=e0230"
      }
    ]
  },
  {
    "database": "UM-BBD_pathwayID",
    "name": "EAWAG Biocatalysis/Biodegradation Database",
    "rdf_uri_prefix": "http://identifiers.org/umbbd.pathway/",
    "generic_urls": [
      "http://eawag-bbd.ethz.ch/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://eawag-bbd.ethz.ch/[example_id]/[example_id]_map.html",
        "example_id": "UM-BBD_pathwayID:acr",
        "example_url": "http://eawag-bbd.ethz.ch/acr/acr_map.html"
      }
    ]
  },
  {
    "database": "UM-BBD_reactionID",
    "name": "EAWAG Biocatalysis/Biodegradation Database",
    "rdf_uri_prefix": "http://identifiers.org/umbbd.reaction/",
    "generic_urls": [
      "http://eawag-bbd.ethz.ch/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://eawag-bbd.ethz.ch/servlets/pageservlet?ptype=r&reacID=[example_id]",
        "example_id": "UM-BBD_reactionID:r0129",
        "example_url": "http://eawag-bbd.ethz.ch/servlets/pageservlet?ptype=r&reacID=r0129"
      }
    ]
  },
  {
    "database": "UM-BBD_ruleID",
    "name": "EAWAG Biocatalysis/Biodegradation Database",
    "generic_urls": [
      "http://eawag-bbd.ethz.ch/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://eawag-bbd.ethz.ch/servlets/rule.jsp?rule=[example_id]",
        "example_id": "UM-BBD_ruleID:bt0330",
        "example_url": "http://eawag-bbd.ethz.ch/servlets/rule.jsp?rule=bt0330"
      }
    ]
  },
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    "database": "UniParc",
    "name": "UniProt Archive",
    "description": "A non-redundant archive of protein sequences extracted from Swiss-Prot, TrEMBL, PIR-PSD, EMBL, Ensembl, IPI, PDB, RefSeq, FlyBase, WormBase, European Patent Office, United States Patent and Trademark Office, and Japanese Patent Office",
    "generic_urls": [
      "https://www.uniprot.org/uniparc/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.uniprot.org/uniparc/[example_id]",
        "example_id": "UniParc:UPI000000000A",
        "example_url": "https://www.uniprot.org/uniparc/UPI000000000A"
      }
    ]
  },
  {
    "database": "UniPathway",
    "name": "UniPathway",
    "description": "UniPathway is a a metabolic door to UniProtKB/Swiss-Prot, a curated resource of metabolic pathways for the UniProtKB/Swiss-Prot knowledgebase.",
    "generic_urls": [
      "http://www.grenoble.prabi.fr/obiwarehouse/unipathway"
    ],
    "entity_types": [
      {
        "type_name": "biological_process",
        "type_id": "GO:0008150",
        "url_syntax": "http://www.grenoble.prabi.fr/obiwarehouse/unipathway/upa?upid=[example_id]",
        "example_id": "UniPathway:UPA00155",
        "example_url": "http://www.grenoble.prabi.fr/obiwarehouse/unipathway/upa?upid=UPA00155"
      }
    ]
  },
  {
    "database": "UniProt",
    "synonyms": [
      "Swiss-Prot",
      "SwissProt",
      "TrEMBL",
      "TR"
    ],
    "name": "Universal Protein Knowledgebase",
    "description": "A central repository of protein sequence and function created by joining the information contained in Swiss-Prot, TrEMBL, and PIR database",
    "generic_urls": [
      "http://www.uniprot.org"
    ]
  },
  {
    "database": "UniProtKB",
    "name": "Universal Protein Knowledgebase",
    "description": "A central repository of protein sequence and function created by joining the information contained in Swiss-Prot, TrEMBL, and PIR database",
    "rdf_uri_prefix": "http://identifiers.org/uniprot/",
    "generic_urls": [
      "http://www.uniprot.org"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "([OPQ][0-9][A-Z0-9]{3}[0-9]|[A-NR-Z]([0-9][A-Z][A-Z0-9]{2}){1,2}[0-9])((-[0-9]+)|-PRO_[0-9]{10}|-VAR_[0-9]{6}){0,1}",
        "url_syntax": "https://www.uniprot.org/uniprot/[example_id]",
        "example_id": "UniProtKB:P51587",
        "example_url": "https://www.uniprot.org/uniprot/"
      }
    ]
  },
  {
    "database": "UniProtKB-KW",
    "name": "UniProt Knowledgebase keywords",
    "synonyms": [
      "SP_KW"
    ],
    "generic_urls": [
      "http://www.uniprot.org/keywords/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.uniprot.org/keywords/[example_id]",
        "example_id": "UniProtKB-KW:KW-0812",
        "example_url": "https://www.uniprot.org/keywords/KW-0812"
      }
    ]
  },
  {
    "database": "UniProtKB-SubCell",
    "name": "UniProt Knowledgebase Subcellular Location vocabulary",
    "synonyms": [
      "SP_SL"
    ],
    "generic_urls": [
      "https://www.uniprot.org/locations/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.uniprot.org/locations/[example_id]",
        "example_id": "UniProtKB-SubCell:SL-0012",
        "example_url": "http://www.uniprot.org/locations/SL-0012"
      }
    ]
  },
  {
    "database": "UniRule",
    "name": "Manually curated rules for automatic annotation of UniProtKB unreviewed entries",
    "generic_urls": [
      "https://www.uniprot.org/unirule/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.uniprot.org/unirule/[example_id]",
        "id_syntax": "UR[0-9]{9}|MF_[0-9]{5}|PIRNR[0-9]{6}|PRU[0-9]{5}|RU[0-9]{6}",
        "example_id": "UniRule:UR000107224",
        "example_url": "https://www.uniprot.org/unirule/UR000107224"
      }
    ]
  },
  {
    "database": "ARBA",
    "name": "ARBA machine learning models for automatic annotation of UniProtKB unreviewed entries",
    "generic_urls": [
      "https://www.uniprot.org/arba/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://www.uniprot.org/arba/[example_id]",
        "id_syntax": "ARBA[0-9]{8}",
        "example_id": "ARBA:ARBA00000001",
        "example_url": "https://www.uniprot.org/arba/ARBA00000001"
      }
    ]
  },
  {
    "database": "VZ",
    "name": "ViralZone",
    "rdf_uri_prefix": "https://viralzone.expasy.org/",
    "generic_urls": [
      "http://viralzone.expasy.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://viralzone.expasy.org/all_by_protein/[example_id].html",
        "example_id": "VZ:957",
        "example_url": "http://viralzone.expasy.org/all_by_protein/957.html"
      }
    ]
  },
  {
    "database": "WB",
    "name": "WormBase database of nematode biology",
    "synonyms": [
      "WormBase"
    ],
    "rdf_uri_prefix": "http://identifiers.org/wormbase/",
    "generic_urls": [
      "http://www.wormbase.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "(CE[0-9]{5})|(WB(Gene|Var|RNAi|Transgene)[0-9]{8})",
        "url_syntax": "http://www.wormbase.org/get?name=[example_id]",
        "example_id": "WB:WBGene00003001",
        "example_url": "http://www.wormbase.org/get?name=WBGene00003001"
      },
      {
        "type_name": "variation",
        "type_id": "VariO:0001",
        "id_syntax": "(CE[0-9]{5})|(WB(Gene|Var|RNAi|Transgene)[0-9]{8})",
        "url_syntax": "http://www.wormbase.org/get?name=[example_id]",
        "example_id": "WB:WBVar00089843",
        "example_url": "http://www.wormbase.org/get?name=WBVar00089843"
      },
      {
        "type_name": "RNAi",
        "type_id": "topic:3523",
        "id_syntax": "(CE[0-9]{5})|(WB(Gene|Var|RNAi|Transgene)[0-9]{8})",
        "url_syntax": "http://www.wormbase.org/get?name=[example_id]",
        "example_id": "WB:WBRNAi00110325",
        "example_url": "http://www.wormbase.org/get?name=WBRNAi00110325"
      },
      {
        "type_name": "Transgene",
        "type_id": "SO:0000902",
        "id_syntax": "(CE[0-9]{5})|(WB(Gene|Var|RNAi|Transgene)[0-9]{8})",
        "url_syntax": "http://www.wormbase.org/get?name=[example_id]",
        "example_id": "WB:WBTransgene00000059",
        "example_url": "http://www.wormbase.org/get?name=WBTransgene00000059"
      },
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "(CE[0-9]{5})|(WB(Gene|Var|RNAi|Transgene)[0-9]{8})",
        "url_syntax": "http://www.wormbase.org/get?name=[example_id]",
        "example_id": "WB:CE00274",
        "example_url": "http://www.wormbase.org/get?name=CE00274"
      }
    ]
  },
  {
    "database": "WB_REF",
    "name": "WormBase database of nematode biology",
    "generic_urls": [
      "http://www.wormbase.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://www.wormbase.org/get?name=[example_id]",
        "example_id": "WB_REF:WBPaper00004823",
        "example_url": "http://www.wormbase.org/get?name=WBPaper00004823"
      }
    ]
  },
  {
    "database": "WBbt",
    "name": "C. elegans gross anatomy",
    "generic_urls": [
      "http://www.wormbase.org/"
    ],
    "entity_types": [
      {
        "type_name": "cell",
        "type_id": "GO:0005623",
        "id_syntax": "[0-9]{7}",
        "url_syntax": "http://www.wormbase.org/get?name=[example_id]",
        "example_id": "WBbt:0005792",
        "example_url": "http://www.wormbase.org/get?name=WBbt:0005792"
      },
      {
        "type_name": "anatomical entity",
        "type_id": "UBERON:0001062",
        "id_syntax": "[0-9]{7}",
        "url_syntax": "http://www.wormbase.org/get?name=[example_id]",
        "example_id": "WBbt:0005733",
        "example_url": "http://www.wormbase.org/get?name=WBbt:0005733"
      }
    ]
  },
  {
    "database": "WBls",
    "name": "C. elegans development",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/WBls_",
    "generic_urls": [
      "http://www.wormbase.org/"
    ],
    "entity_types": [
      {
        "type_name": "nematoda life stage",
        "type_id": "WBls:0000075",
        "id_syntax": "[0-9]{7}",
        "url_syntax": "http://www.wormbase.org/get?name=[example_id]",
        "example_id": "WBls:0000010",
        "example_url": "http://www.wormbase.org/get?name=WBls:0000010"
      }
    ]
  },
  {
    "database": "WBPhenotype",
    "name": "WormBase phenotype ontology",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/WBPhenotype_",
    "generic_urls": [
      "http://www.wormbase.org/"
    ],
    "entity_types": [
      {
        "type_name": "quality",
        "type_id": "PATO:0000001",
        "id_syntax": "[0-9]{7}",
        "url_syntax": "http://www.wormbase.org/get?name=[example_id]",
        "example_id": "WBPhenotype:0002117",
        "example_url": "http://www.wormbase.org/get?name=WBPhenotype:0002117"
      }
    ]
  },
  {
    "database": "Wikipedia",
    "name": "Wikipedia",
    "generic_urls": [
      "http://en.wikipedia.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "http://en.wikipedia.org/wiki/[example_id]",
        "example_id": "Wikipedia:Endoplasmic_reticulum",
        "example_url": "http://en.wikipedia.org/wiki/Endoplasmic_reticulum"
      }
    ]
  },
  {
    "database": "WikipediaVersioned",
    "name": "WikipediaVersioned",
    "generic_urls": [
      "http://en.wikipedia.org/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000",
        "url_syntax": "https://en.wikipedia.org/w/index.php?title=[example_id]",
        "example_id": "WikipediaVersioned:Fallopian_tube&oldid=998395727",
        "example_url": "https://en.wikipedia.org/w/index.php?title=Fallopian_tube&oldid=998395727"
      }
    ]
  },
  {
    "database": "Xenbase",
    "name": "Xenbase",
    "rdf_uri_prefix": "http://identifiers.org/xenbase/",
    "generic_urls": [
      "http://www.xenbase.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "XB-(GENE|LINE|TRANSGENE|MORPHOLINO)-[0-9]+",
        "url_syntax": "http://www.xenbase.org/entry/[example_id]",
        "example_id": "Xenbase:XB-GENE-6255962",
        "example_url": "http://www.xenbase.org/entry/XB-GENE-6255962"
      },
      {
        "type_name": "morpholino oligo",
        "type_id": "SO:0000034",
        "id_syntax": "XB-(GENE|LINE|TRANSGENE|MORPHOLINO)-[0-9]+",
        "url_syntax": "http://www.xenbase.org/entry/[example_id]",
        "example_id": "Xenbase:XB-MORPHOLINO-17250301",
        "example_url": "http://www.xenbase.org/entry/XB-MORPHOLINO-17250301"
      },
      {
        "type_name": "transgene",
        "type_id": "SO:0000902",
        "id_syntax": "XB-(GENE|LINE|TRANSGENE|MORPHOLINO)-[0-9]+",
        "url_syntax": "http://www.xenbase.org/entry/[example_id]",
        "example_id": "Xenbase:XB-TRANSGENE-17326811",
        "example_url": "http://www.xenbase.org/entry/XB-TRANSGENE-17326811"
      },
      {
        "type_name": "strain",
        "type_id": "EFO:0005135",
        "id_syntax": "XB-(GENE|LINE|TRANSGENE|MORPHOLINO)-[0-9]+",
        "url_syntax": "http://www.xenbase.org/entry/[example_id]",
        "example_id": "Xenbase:XB-LINE-1248",
        "example_url": "http://www.xenbase.org/entry/XB-LINE-1248"
      }
    ]
  },
  {
    "database": "YeastFunc",
    "name": "Yeast Function",
    "generic_urls": [
      "http://func.med.harvard.edu/yeast/"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "YuBioLab",
    "name": "CITGeneDB",
    "description": "CITGeneDB is a comprehensive database of human and mouse genes enhancing or suppressing Cold-Induced Thermogenesis (CIT).",
    "generic_urls": [
      "http://citgenedb.yubiolab.org"
    ]
  },
  {
    "database": "ZFIN",
    "name": "Zebrafish Information Network",
    "rdf_uri_prefix": "http://identifiers.org/zfin/",
    "generic_urls": [
      "http://zfin.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "ZDB-(TRNAG|LINCRNAG|MIRNAG|NCRNAG|SNORNAG|GENE)-[0-9]{6}-[0-9]+",
        "url_syntax": "https://zfin.org/[example_id]",
        "example_id": "ZFIN:ZDB-GENE-990415-103",
        "example_url": "https://zfin.org/ZDB-GENE-990415-103"
      },
      {
        "type_name": "variation",
        "type_id": "VariO:0001",
        "id_syntax": "ZDB-(GENO|MRPHLNO|CRISPR|FISH|TALEN)-[0-9]{6}-[0-9]+",
        "url_syntax": "https://zfin.org/[example_id]",
        "example_id": "ZFIN:ZDB-MRPHLNO-081020-2",
        "example_url": "https://zfin.org/ZDB-MRPHLNO-081020-2"
      }
    ]
  },
  {
    "database": "ZFA",
    "name": "Zebrafish anatomy ontology",
    "rdf_uri_prefix": "http://purl.obolibrary.org/obo/ZFA_",
    "generic_urls": [
      "http://zfin.org/"
    ],
    "entity_types": [
      {
        "type_name": "anatomical entity",
        "type_id": "UBERON:0000105",
        "id_syntax": "[0-9]{7}",
        "url_syntax": "https://zfin.org/action/ontology/term/ZFA:[example_id]",
        "example_id": "ZFA:0001327",
        "example_url": "https://zfin.org/action/ontology/term/ZFA:0001327"
      }
    ]
  },
  {
    "database": "TFClass",
    "name": "TFClass is a resource for the classification of eukaryotic transcription factors based on the characteristics of their DNA-binding domains",
    "generic_urls": [
      "http://tfclass.bioinf.med.uni-goettingen.de/"
    ],
    "synonyms": [
      "TFCLASS_FAMILY",
      "tfclass"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "url_syntax": "http://tfclass.bioinf.med.uni-goettingen.de/?tfclass=[example_id]",
        "id_syntax": "\\d+(\\.\\d+){2,3}",
        "example_id": "TFCLASS_FAMILY:2.1.1",
        "example_url": "http://tfclass.bioinf.med.uni-goettingen.de/?tfclass=2.1.1"
      }
    ]
  },
  {
    "database": "HGNC-UCL",
    "name": "UCL-based HGNC",
    "description": "While based at UCL, HGNC provided GO annotations for proteins during the process of assigning approved gene names and symbols",
    "generic_urls": [
      "https://www.ucl.ac.uk/cardiovascular/hgnc-gene-annotation"
    ],
    "entity_types": [
      {
        "type_name": "entity",
        "type_id": "BET:0000000"
      }
    ]
  },
  {
    "database": "Animal_QTLdb",
    "name": "QTLdb",
    "generic_urls": [
      "https://www.animalgenome.org/QTLdb"
    ],
    "description": "A database with curated publicly available trait mapping data (QTL and SNP associations) in livestock animal species. The link ID is called QTL_ID on QTLdb data dpownloads.",
    "entity_types": [
      {
        "type_name": "QTL",
        "type_id": "QTL_ID:0000000",
        "url_syntax": "https://www.animalgenome.org/QTLdb/q?id=[example_id]",
        "id_syntax": "\\d+",
        "example_id": "Animal_QTLdb:23155",
        "example_url": "https://www.animalgenome.org/QTLdb/q?id=23155"
      }
    ]
  },
  {
    "database": "Animal_CorrDB",
    "name": "CorrDB",
    "generic_urls": [
      "https://www.animalgenome.org/CorrDB"
    ],
    "description": "A database with curated publicly available trait correlation and inheritability data in livestock animal species. The link ID is called  The link ID is called Corr_ID on CorrDB data downloads.",
    "entity_types": [
      {
        "type_name": "Correlation",
        "type_id": "CorrID:000000",
        "url_syntax": "https://www.animalgenome.org/CorrDB/q/?id=[example_id]",
        "id_syntax": "\\d+",
        "example_id": "Animal_CorrDB:37232",
        "example_url": "https://www.animalgenome.org/CorrDB/q/?id=37232"
      }
    ]
  },
  {
    "database": "AlphaFold",
    "name": "AlphaFold Protein Structure Database",
    "generic_urls": [
      "https://alphafold.ebi.ac.uk/"
    ],
    "entity_types": [
      {
        "type_name": "protein",
        "type_id": "PR:000000001",
        "id_syntax": "([OPQ][0-9][A-Z0-9]{3}[0-9]|[A-NR-Z]([0-9][A-Z][A-Z0-9]{2}){1,2}[0-9])((-[0-9]+)|-PRO_[0-9]{10}|-VAR_[0-9]{6}){0,1}",
        "url_syntax": "https://alphafold.ebi.ac.uk/entry/[example_id]",
        "example_id": "AlphaFold:Q5VSL9",
        "example_url": "https://alphafold.ebi.ac.uk/entry/Q5VSL9"
      }
    ]
  },
  {
    "database": "JaponicusDB",
    "name": "JaponicusDB",
    "generic_urls": [
      "https://www.japonicusdb.org/"
    ],
    "entity_types": [
      {
        "type_name": "gene",
        "type_id": "SO:0000704",
        "id_syntax": "S\\w+(\\_)?\\d",
        "url_syntax": "https://www.japonicusdb.org/gene/[example_id]",
        "example_id": "JaponicusDB:SJAG_01143",
        "example_url": "https://www.japonicusdb.org/gene/SJAG_01143"
      }
    ]
  },
  {
    "database": "TreeGrafter",
    "name": "TreeGrafter-generated GO annotations",
    "rdf_uri_prefix": "http://identifiers.org/panther.family/",
    "generic_urls": [
      "https://www.pantherdb.org/"
    ],
    "entity_types": [
      {
        "type_name": "protein family",
        "type_id": "NCIT:C20130",
        "id_syntax": "PTN[0-9]{9}|PTHR[0-9]{5}|PTHR[0-9]{5}:SF[0-9]+",
        "url_syntax": "https://www.pantherdb.org/panther/lookupId.jsp?id=[example_id]",
        "example_id": "PANTHER:PTHR11455",
        "example_url": "https://www.pantherdb.org/panther/lookupId.jsp?id=PTHR10000"
      }
    ]
  }
]
